FZD8

gene
On this page

Also known as FZ-8

Summary

FZD8 (frizzled class receptor 8, HGNC:4046) is a protein-coding gene on chromosome 10p11.21, encoding Frizzled-8 (Q9H461). Receptor for Wnt proteins.

This intronless gene is a member of the frizzled gene family. Members of this family encode seven-transmembrane domain proteins that are receptors for the Wingless type MMTV integration site family of signaling proteins. Most frizzled receptors are coupled to the beta-catenin canonical signaling pathway. This gene is highly expressed in two human cancer cell lines, indicating that it may play a role in several types of cancer. The crystal structure of the extracellular cysteine-rich domain of a similar mouse protein has been determined.

Source: NCBI Gene 8325 — RefSeq curated summary.

At a glance

  • GWAS associations: 5
  • Clinical variants (ClinVar): 85 total
  • Druggable target: yes
  • MANE Select transcript: NM_031866

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:4046
Approved symbolFZD8
Namefrizzled class receptor 8
Location10p11.21
Locus typegene with protein product
StatusApproved
AliasesFZ-8
Ensembl geneENSG00000177283
Ensembl biotypeprotein_coding
OMIM606146
Entrez8325

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 protein_coding

ENST00000374694

RefSeq mRNA: 1 — MANE Select: NM_031866 NM_031866

CCDS: CCDS7192

Canonical transcript exons

ENST00000374694 — 1 exons

ExonStartEnd
ENSE000014643673563824735642296

Expression profiles

Bgee: expression breadth ubiquitous, 223 present calls, max score 98.63.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 5.9312 / max 136.8508, expressed in 1332 samples.

FANTOM5 promoters (4 alternative TSS)

Promoter IDTPM avgSamples expressed
1091114.42041189
1091100.6221373
1091080.6120379
1091090.2768145

Top tissues by expression

251 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
ventricular zoneUBERON:000305398.63gold quality
cartilage tissueUBERON:000241893.83gold quality
ganglionic eminenceUBERON:000402392.46gold quality
pigmented layer of retinaUBERON:000178292.25gold quality
tendon of biceps brachiiUBERON:000818891.97gold quality
trabecular bone tissueUBERON:000248389.89gold quality
left ventricle myocardiumUBERON:000656688.71gold quality
mammary ductUBERON:000176588.45gold quality
epithelium of mammary glandUBERON:000324487.82gold quality
epithelial cell of pancreasCL:000008386.76gold quality
pancreatic ductal cellCL:000207985.93silver quality
dorsal root ganglionUBERON:000004484.49gold quality
trigeminal ganglionUBERON:000167584.05gold quality
pericardiumUBERON:000240783.39gold quality
heart right ventricleUBERON:000208083.01gold quality
renal medullaUBERON:000036282.83gold quality
sural nerveUBERON:001548882.46gold quality
tendonUBERON:000004382.24gold quality
saphenous veinUBERON:000731881.12gold quality
mammary glandUBERON:000191180.79gold quality
germinal epithelium of ovaryUBERON:000130480.67gold quality
thoracic mammary glandUBERON:000520080.63gold quality
cardia of stomachUBERON:000116280.44gold quality
primordial germ cell in gonadCL:0000670 ∩ UBERON:000099180.29gold quality
skeletal muscle tissue of biceps brachiiUBERON:000450280.28silver quality
cardiac atriumUBERON:000208179.97gold quality
tibiaUBERON:000097979.77gold quality
lower lobe of lungUBERON:000894979.33gold quality
calcaneal tendonUBERON:000370179.27gold quality
right atrium auricular regionUBERON:000663179.24gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

ExperimentMarker?Max mean expression
E-ANND-3yes3.43

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): ELK1, PAX4

miRNA regulators (miRDB)

94 targeting FZD8, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-190A-3P100.0080.355520
HSA-MIR-9-5P100.0072.282361
HSA-MIR-4510100.0066.602050
HSA-MIR-6127100.0066.762188
HSA-MIR-6129100.0066.462080
HSA-MIR-6130100.0066.692012
HSA-MIR-6133100.0066.482064
HSA-MIR-5193100.0067.261744
HSA-MIR-5692A100.0074.406850
HSA-MIR-569699.9872.364487
HSA-MIR-499A-5P99.9870.791323
HSA-MIR-56899.9869.862084
HSA-MIR-806899.9873.852376
HSA-MIR-302C-5P99.9772.563642
HSA-MIR-568899.9673.234504
HSA-MIR-495-3P99.9672.814197
HSA-MIR-365899.9673.874379
HSA-MIR-4725-3P99.9669.532520
HSA-MIR-6780B-5P99.9669.602562
HSA-MIR-391099.9571.132227
HSA-MIR-6772-5P99.9467.01577
HSA-MIR-7-1-3P99.9171.534384
HSA-MIR-7-2-3P99.9171.404394
HSA-MIR-124-3P99.8973.743043
HSA-MIR-506-3P99.8973.553057
HSA-MIR-394199.8670.542735
HSA-MIR-6756-5P99.8267.972466
HSA-MIR-3121-3P99.8271.963630
HSA-MIR-2681-5P99.7567.641655
HSA-MIR-3617-5P99.7569.411968

Literature-anchored findings (GeneRIF, showing 20)

  • molecular model of the Wnt protein binding site on the surface of dimeric CRD domain of the Fzd8 receptor (PMID:18505162)
  • analysis of the frizzled8.Wnt3a.LRP6 signaling complex reveals multiple Wnt and Dkk1 binding sites on LRP6 (PMID:20093360)
  • These observations suggest that c-Jun is involved in APF-mediated inhibition for bladder tumor cell growth (PMID:21872498)
  • Soluble FZC18 and Wnt3a physically interact in a cell-free system and soluble FZC18 binds the frizzled 1 and 8 receptors. (PMID:22303445)
  • APF has been shown to be a nine-residue frizzled-8 protein-related sialoglycopeptide. Subsequent research has gradually clarified the molecular mechanisms underlying the profound antiproliferative effect of APF. (PMID:22738385)
  • We demonstrated an activation of Wnt-2 signaling via the Frizzled-8 receptor in non-small cell lung cancer cells (PMID:23815780)
  • c-Met upregulated FZD8 through the ERK/c-Fos cascade in HN-CSC. Taken together, our results offer a preclinical proof-of-concept for targeting the c-Met/FZD8 signaling axis as a CSC-directed therapy to improve HNSCC treatment (PMID:25320014)
  • report the discovery of a human-accelerated regulatory enhancer (HARE5) of FZD8, a receptor of the Wnt pathway implicated in brain development and size (PMID:25702574)
  • these findings suggest that miR-100 suppresses the migration and invasion of breast cancer cells by targeting FZD-8 and inhibiting Wnt/b-catenin signaling pathway and manipulation of miR-100 may provide a promoting therapeutic strategy for cancer breast treatment. (PMID:26537584)
  • Study concludes that expression of Fzd8 is repressed in multiple cancers and suggest it may have a role as a tumor suppressor. (PMID:26590425)
  • Frizzled-8 has an important pro-inflammatory role and suggest that its expression is related to chronic bronchitis. (PMID:26797711)
  • miR-375 functions as a tumor-suppressive microRNA by directly acting upon FZD8, which may serve as a new therapeutic target to inhibit tumor metastasis in colorectal cancer (PMID:27276676)
  • Elevated expression of TP53 target FZD8 promoted prostate cancer bone metastasis by activating the canonical Wnt/beta-catenin signaling pathway. (PMID:28602974)
  • FZD8 forms a TGF-beta-regulated complex with TGF-beta receptors that is mediated by the extracellular domains of FZD8 and TGFBR1 (PMID:29717114)
  • Expression of FZD8 is directly correlated with ERG expression in prostate cancer. Furthermore, we show that ERG directly targets and activates FZD8 by binding to its promoter. This activation is specific to ETS transcription factor ERG and not ETV1. (PMID:30051493)
  • Frizzled-4 is required for normal bone acquisition despite compensation by Frizzled-8. (PMID:31985040)
  • FZD8 Indicates a Poor Prognosis and Promotes Gastric Cancer Invasion and Metastasis via B-Catenin Signaling Pathway. (PMID:32161008)
  • MiR-99a alleviates apoptosis and extracellular matrix degradation in experimentally induced spine osteoarthritis by targeting FZD8. (PMID:36127685)
  • Overexpressions of RHOA, CSNK1A1, DVL2, FZD8, and LRP5 genes enhance gastric cancer development in the presence of Helicobacter pylori. (PMID:36720664)
  • CircMCTP2 enhances the progression of bladder cancer by regulating the miR-99a-5p/FZD8 axis. (PMID:38494582)

Cross-species orthologs

5 orthologs

OrganismSymbolGene ID
danio_reriofzd8bENSDARG00000038569
danio_reriofzd8aENSDARG00000045444
mus_musculusFzd8ENSMUSG00000036904
rattus_norvegicusFzd8ENSRNOG00000069521
drosophila_melanogasterfz3FBGN0027343

Paralogs (15): FZD3 (ENSG00000104290), SFRP1 (ENSG00000104332), SFRP4 (ENSG00000106483), FZD10 (ENSG00000111432), SFRP5 (ENSG00000120057), SMO (ENSG00000128602), SFRP2 (ENSG00000145423), FZD7 (ENSG00000155760), FZD1 (ENSG00000157240), FRZB (ENSG00000162998), FZD5 (ENSG00000163251), FZD6 (ENSG00000164930), FZD4 (ENSG00000174804), FZD2 (ENSG00000180340), FZD9 (ENSG00000188763)

Protein

Protein identifiers

Frizzled-8Q9H461 (reviewed: Q9H461)

All UniProt accessions (1): Q9H461

UniProt curated annotations — full annotation on UniProt →

Function. Receptor for Wnt proteins. Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalosomes. The beta-catenin canonical signaling pathway leads to the activation of disheveled proteins, inhibition of GSK-3 kinase, nuclear accumulation of beta-catenin and activation of Wnt target genes. A second signaling pathway involving PKC and calcium fluxes has been seen for some family members, but it is not yet clear if it represents a distinct pathway or if it can be integrated in the canonical pathway, as PKC seems to be required for Wnt-mediated inactivation of GSK-3 kinase. Both pathways seem to involve interactions with G-proteins. May be involved in transduction and intercellular transmission of polarity information during tissue morphogenesis and/or in differentiated tissues. Coreceptor along with RYK of Wnt proteins, such as WNT1.

Subunit / interactions. Component of a Wnt-signaling complex that contains a WNT protein, a FZD protein and LRP5 or LRP6. Interacts directly with LRP5 or LRP6; the interaction is promoted by Wnt-binding and signaling and inhibited by DKK1. Interacts with GPOC, RSPO1 and RSPO3. Interacts with glypican GPC3.

Subcellular location. Membrane. Golgi apparatus. Cell membrane.

Tissue specificity. Most abundant in fetal kidney, followed by brain and lung. In adult tissues, expressed in kidney, heart, pancreas and skeletal muscle.

Post-translational modifications. Ubiquitinated by ZNRF3, leading to its degradation by the proteasome.

Domain organisation. The PDZ-binding motif mediates interaction with GOPC. Lys-Thr-X-X-X-Trp motif interacts with the PDZ domain of Dvl (Disheveled) family members and is involved in the activation of the Wnt/beta-catenin signaling pathway. The FZ domain is involved in binding with Wnt ligands.

Similarity. Belongs to the G-protein coupled receptor Fz/Smo family.

RefSeq proteins (1): NP_114072* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR000539Frizzled/Smoothened_7TMDomain
IPR015526Frizzled/SFRPFamily
IPR017981GPCR_2-like_7TMDomain
IPR020067Frizzled_domDomain
IPR036790Frizzled_dom_sfHomologous_superfamily
IPR041776FZ8_CRDDomain

Pfam: PF01392, PF01534

UniProt features (48 total): topological domain 8, transmembrane region 7, helix 6, disulfide bond 5, strand 5, region of interest 4, compositionally biased region 4, glycosylation site 3, short sequence motif 2, signal peptide 1, chain 1, domain 1, binding site 1

Structure

Experimental structures (PDB)

7 structures.

PDBMethodResolution (Å)
6NDZX-RAY DIFFRACTION2.26
8X0TX-RAY DIFFRACTION2.5
21KRELECTRON MICROSCOPY2.9
5UN5X-RAY DIFFRACTION2.99
21KSELECTRON MICROSCOPY3.01
5UN6X-RAY DIFFRACTION3.2
21KTELECTRON MICROSCOPY3.33

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-Q9H461-F177.050.43

Antibody-complex structures (SAbDab): 18X0T

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Ligand- & substrate-binding residues (1): 71–78

Disulfide bonds (5): 35–96, 43–89, 80–118, 107–148, 111–135

Glycosylation sites (3): 49, 152, 475

Function

Pathways and Gene Ontology

Reactome pathways

4 pathways

IDPathway
R-HSA-373080Class B/2 (Secretin family receptors)
R-HSA-4608870Asymmetric localization of PCP proteins
R-HSA-4641263Regulation of FZD by ubiquitination
R-HSA-5340588Signaling by RNF43 mutants

MSigDB gene sets: 181 (showing top): LI_CISPLATIN_RESISTANCE_DN, MIDORIKAWA_AMPLIFIED_IN_LIVER_CANCER, GOCC_SECRETORY_GRANULE, GOBP_NON_CANONICAL_WNT_SIGNALING_PATHWAY, GOBP_NEUROGENESIS, ACEVEDO_LIVER_CANCER_WITH_H3K27ME3_UP, YY1_Q6, GOBP_CANONICAL_WNT_SIGNALING_PATHWAY, KEGG_PATHWAYS_IN_CANCER, YY1_02, GTGTTGA_MIR505, GOBP_BLOOD_VESSEL_MORPHOGENESIS, JECHLINGER_EPITHELIAL_TO_MESENCHYMAL_TRANSITION_DN, GOMF_SIGNALING_RECEPTOR_BINDING, GRYDER_PAX3FOXO1_ENHANCERS_IN_TADS

GO Biological Process (9): angiogenesis (GO:0001525), neuron differentiation (GO:0030182), T cell differentiation in thymus (GO:0033077), non-canonical Wnt signaling pathway (GO:0035567), canonical Wnt signaling pathway (GO:0060070), signal transduction (GO:0007165), cell surface receptor signaling pathway (GO:0007166), G protein-coupled receptor signaling pathway (GO:0007186), Wnt signaling pathway (GO:0016055)

GO Molecular Function (8): G protein-coupled receptor activity (GO:0004930), signaling receptor binding (GO:0005102), Wnt-protein binding (GO:0017147), PDZ domain binding (GO:0030165), ubiquitin protein ligase binding (GO:0031625), Wnt receptor activity (GO:0042813), transmembrane signaling receptor activity (GO:0004888), protein binding (GO:0005515)

GO Cellular Component (5): Golgi apparatus (GO:0005794), plasma membrane (GO:0005886), membrane (GO:0016020), neuronal dense core vesicle (GO:0098992), Wnt-Frizzled-LRP5/6 complex (GO:1990851)

Reactome top-level categories

Rollup of top-4 pathways:

CategoryPathways
GPCR ligand binding1
PCP/CE pathway1
TCF dependent signaling in response to WNT1
Signaling by WNT in cancer1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
Wnt signaling pathway3
signal transduction2
transmembrane signaling receptor activity2
protein binding2
blood vessel morphogenesis1
anatomical structure formation involved in morphogenesis1
cell differentiation1
generation of neurons1
T cell differentiation1
cell communication1
cellular process1
signaling1
regulation of cellular process1
cellular response to stimulus1
G protein-coupled receptor activity1
cell surface receptor signaling pathway1
G protein-coupled receptor signaling pathway1
protein domain specific binding1
ubiquitin-like protein ligase binding1
Wnt-protein binding1
signaling receptor activity1
binding1
cytoplasm1
endomembrane system1
intracellular membrane-bounded organelle1
membrane1
cell periphery1
cellular anatomical structure1
dense core granule1
plasma membrane protein complex1

Protein interactions and networks

STRING

1185 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
FZD8WNT3AP56704954
FZD8LRP6O75581947
FZD8WNT3P56703937
FZD8WNT11O96014929
FZD8WNT1P04628923
FZD8WNT2P09544873
FZD8WNT5BQ9H1J7863
FZD8WNT4P56705858
FZD8WNT5AP41221846
FZD8WNT2BQ93097841
FZD8IGFBP4P22692831
FZD8LRP5O75197818
FZD8DVL2O14641802
FZD8CTNNB1P35222793
FZD8DKK4Q9UBT3788

IntAct

155 interactions, top by confidence:

ABTypeScore
IPPKTMEM223psi-mi:“MI:0914”(association)0.530
FSHRUPK3BL1psi-mi:“MI:0914”(association)0.530
SLC6A8ILVBLpsi-mi:“MI:0914”(association)0.530
WNT3AFZD8psi-mi:“MI:0915”(physical association)0.500
FZD8WNT3Apsi-mi:“MI:0914”(association)0.500
FZD8tcdBpsi-mi:“MI:0407”(direct interaction)0.440
FZD8PATJpsi-mi:“MI:0407”(direct interaction)0.440
FZD8GOPCpsi-mi:“MI:0407”(direct interaction)0.440
FZD8MAGI3psi-mi:“MI:0407”(direct interaction)0.440
FZD8RHPN1psi-mi:“MI:0407”(direct interaction)0.440
FZD8MAST2psi-mi:“MI:0407”(direct interaction)0.440
MAGI2FZD8psi-mi:“MI:0407”(direct interaction)0.440
GRID2IPFZD8psi-mi:“MI:0407”(direct interaction)0.440
FZD8PDZD2psi-mi:“MI:0407”(direct interaction)0.440
FZD8PDZD7psi-mi:“MI:0407”(direct interaction)0.440
FZD8MAST1psi-mi:“MI:0407”(direct interaction)0.440
FZD8ARHGEF12psi-mi:“MI:0407”(direct interaction)0.440
FZD8SNTG1psi-mi:“MI:0407”(direct interaction)0.440
FZD8SNX27psi-mi:“MI:0407”(direct interaction)0.440
FZD8HTRA4psi-mi:“MI:0407”(direct interaction)0.440
ARHGAP21FZD8psi-mi:“MI:0407”(direct interaction)0.440
APBA3FZD8psi-mi:“MI:0407”(direct interaction)0.440
FZD8APBA2psi-mi:“MI:0407”(direct interaction)0.440
FZD8LIN7Cpsi-mi:“MI:0407”(direct interaction)0.440
FZD8PALS2psi-mi:“MI:0407”(direct interaction)0.440
FZD8IL16psi-mi:“MI:0407”(direct interaction)0.440
PICK1FZD8psi-mi:“MI:0407”(direct interaction)0.440
FZD8DLG3psi-mi:“MI:0407”(direct interaction)0.440
FZD8NHERF4psi-mi:“MI:0407”(direct interaction)0.440

BioGRID (39): FZD8 (Affinity Capture-Western), FZD8 (Affinity Capture-MS), FZD8 (Affinity Capture-MS), FZD8 (Affinity Capture-RNA), FZD8 (Affinity Capture-MS), FZD8 (Affinity Capture-Western), RNF43 (Affinity Capture-Western), DVL3 (Affinity Capture-Western), FZD8 (Proximity Label-MS), FZD8 (Affinity Capture-MS), FZD8 (Affinity Capture-MS), FZD8 (Affinity Capture-MS), FZD8 (Affinity Capture-MS), FZD8 (Affinity Capture-MS), FZD8 (Affinity Capture-MS)

ESM2 similar proteins: A0A0P0UZP7, B0KZ40, B2DBE9, B6UV92, B8B016, O22241, O70421, O88696, P08196, P0C586, P24322, P37271, P37272, P37294, P49085, P49293, P53797, Q01IJ3, Q08463, Q0DDE3, Q1LVN8, Q28CH3, Q2QLV9, Q2R1U4, Q498S8, Q52QW5, Q5QNM6, Q5VP70, Q5Z5B7, Q5ZJT0, Q61091, Q67UU0, Q6EI12, Q6L534, Q6L5F6, Q6Z1Y6, Q6Z2T8, Q74ZW4, Q7X745, Q7XAP4

Diamond homologs: A0A0K3AWM6, B3DIG4, G5ECQ2, O00144, O19116, O42579, O57328, O57329, O60353, O70421, O75084, O93274, P18537, P58421, P97299, P97401, Q08463, Q08464, Q13467, Q14332, Q24760, Q498S8, Q5BL72, Q5RCN4, Q5RF67, Q5T4F7, Q61086, Q61088, Q61089, Q61090, Q61091, Q6FHJ7, Q7YRN1, Q80YN4, Q863H1, Q8AVJ9, Q8BKG4, Q8C4U3, Q8CHL0, Q8K4C8

SIGNOR signaling

7 interactions.

AEffectBMechanism
WNT1up-regulatesFZD8binding
RYKup-regulatesFZD8binding
FZD8“up-regulates activity”LRP5binding
FZD8“up-regulates activity”LRP6binding
WNT3Aup-regulatesFZD8binding
ZNRF3“down-regulates quantity”FZD8ubiquitination
hsa-miR-100-3p“down-regulates quantity by repression”FZD8“post transcriptional regulation”

Enriched among interaction partners

Reactome pathways and GO biological processes over-represented among this gene’s 127 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.

Reactome pathways:

PathwayPartnersFoldFDR
Ras activation upon Ca2+ influx through NMDA receptor535.7×1e-05
Unblocking of NMDA receptors, glutamate binding and activation534.0×1e-05
Negative regulation of NMDA receptor-mediated neuronal transmission534.0×1e-05
Assembly and cell surface presentation of NMDA receptors1031.7×6e-11
Dopamine Neurotransmitter Release Cycle531.0×2e-05
Long-term potentiation529.7×2e-05
Neurexins and neuroligins1127.1×5e-11
Protein-protein interactions at synapses723.2×2e-06

GO biological processes:

GO termPartnersFoldFDR
establishment or maintenance of epithelial cell apical/basal polarity1156.1×2e-14
protein localization to synapse640.3×1e-06
receptor clustering738.3×2e-07
regulation of postsynaptic membrane neurotransmitter receptor levels730.4×6e-07
protein-containing complex assembly1010.0×8e-06
cell-cell adhesion108.9×2e-05
protein localization to plasma membrane76.7×3e-03
chemical synaptic transmission96.1×1e-03

Disease & clinical

Clinical variants and AI predictions

ClinVar

85 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic0
Uncertain significance78
Likely benign7
Benign0

Top pathogenic / likely-pathogenic (0)

SpliceAI

26 predictions. Top by Δscore:

VariantEffectΔscore
10:35642158:T:TAdonor_gain0.6800
10:35642059:T:TAdonor_gain0.6400
10:35642020:G:Adonor_gain0.6200
10:35642039:C:CAdonor_gain0.5600
10:35642276:C:Adonor_gain0.4300
10:35642275:T:TAdonor_gain0.3800
10:35640632:GTTGT:Gacceptor_gain0.3200
10:35642240:T:TAdonor_gain0.3000
10:35642205:C:CTdonor_gain0.2900
10:35639662:A:ACdonor_gain0.2800
10:35639663:C:CCdonor_gain0.2800
10:35642055:T:TAdonor_gain0.2700
10:35640615:T:TAacceptor_gain0.2600
10:35641872:T:Adonor_gain0.2600
10:35640621:C:CCacceptor_gain0.2500
10:35642202:GGA:Gdonor_gain0.2500
10:35640635:GTGGC:Gacceptor_gain0.2400
10:35642089:G:Tdonor_gain0.2400
10:35642150:AGTCT:Adonor_gain0.2400
10:35640168:CA:Cacceptor_gain0.2300
10:35640633:TTGTG:Tacceptor_gain0.2100
10:35640706:ACACG:Adonor_gain0.2100
10:35640707:CACGC:Cdonor_gain0.2100
10:35641636:T:TAdonor_gain0.2100
10:35640620:G:GCacceptor_gain0.2000
10:35642066:T:TAdonor_gain0.2000

AlphaMissense

4453 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
10:35639629:C:GG601R1.000
10:35639640:C:TG597D1.000
10:35639641:C:GG597R1.000
10:35639747:C:AW561C1.000
10:35639747:C:GW561C1.000
10:35639749:A:GW561R1.000
10:35639749:A:TW561R1.000
10:35639910:A:GL507P1.000
10:35639923:C:GG503R1.000
10:35639944:C:GG496R1.000
10:35640009:C:AG474V1.000
10:35640009:C:TG474D1.000
10:35640010:C:AG474C1.000
10:35640010:C:GG474R1.000
10:35640017:G:CC471W1.000
10:35640018:C:AC471F1.000
10:35640018:C:GC471S1.000
10:35640018:C:TC471Y1.000
10:35640019:A:GC471R1.000
10:35640019:A:TC471S1.000
10:35640024:C:AG469V1.000
10:35640025:C:AG469C1.000
10:35640025:C:GG469R1.000
10:35640036:T:AD465V1.000
10:35640036:T:CD465G1.000
10:35640039:C:TG464D1.000
10:35640040:C:AG464C1.000
10:35640040:C:GG464R1.000
10:35640060:A:GL457P1.000
10:35640084:G:CP449R1.000

dbSNP variants (sampled 300 via entrez): RS1000117060 (10:35642727 C>G), RS1000524802 (10:35641881 G>A), RS1000551106 (10:35642482 T>G), RS1001282277 (10:35643070 C>G), RS1001514046 (10:35641853 G>A), RS1001931049 (10:35638538 A>C,G), RS1002287975 (10:35642124 C>G,T), RS1002319083 (10:35641928 G>A,T), RS1002527853 (10:35640961 T>G), RS1003393560 (10:35643778 C>A,G,T), RS1003929527 (10:35639486 GCCGCCGCCCCCCGGC>G), RS1004062672 (10:35642144 G>C), RS1004727494 (10:35642268 C>A,T), RS1004912471 (10:35638194 G>C), RS1004984020 (10:35638522 A>G,T)

Disease associations

OMIM: gene MIM:606146 | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

5 associations (top):

StudyTraitp-value
GCST000189_28Protein quantitative trait loci3.000000e-06
GCST001588_12Periodontal microbiota2.000000e-06
GCST001613_7Antineutrophil cytoplasmic antibody-associated vasculitis9.000000e-06
GCST006193_1Diastolic blood pressure x smoking status (current vs non-current) interaction (2df test)4.000000e-10
GCST006194_5Diastolic blood pressure x smoking status (current vs non-current) interaction (1df test)4.000000e-06

EFO canonical traits (3, from GWAS)

EFO IDTrait name
EFO:0004614apolipoprotein A 1 measurement
EFO:0006336diastolic blood pressure
EFO:0006527smoking status measurement

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL3559689 (SINGLE PROTEIN)

PharmGKB: 1 entry (VIP=true, CPIC=false)

GtoPdb / IUPHAR curated pharmacology

(IUPHAR/BPS Guide to Pharmacology — expert-curated)

Target class: gpcr — Class Frizzled GPCRs

Most potent curated ligand interactions (2 total), top 2:

LigandActionAffinityParameter
vantictumabAntagonist8.0pIC50
carbamazepineNegative4.77pKd

CTD chemical–gene interactions

43 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Valproic Acidaffects cotreatment, decreases expression, affects expression, increases methylation7
sodium arsenitedecreases expression, increases expression3
trichostatin Aaffects cotreatment, decreases expression2
entinostatdecreases expression, affects cotreatment2
Atrazineaffects cotreatment, increases expression2
Estradiolaffects cotreatment, increases expression, decreases expression2
Phenylmercuric Acetateaffects cotreatment, decreases expression2
methylmercuric chloridedecreases expression1
lead acetatedecreases expression1
2,5,2’,5’-tetrachlorobiphenylincreases expression1
decabromobiphenyl etherincreases expression1
2-methyl-4-isothiazolin-3-oneincreases expression1
kojic acidincreases expression1
butyraldehydedecreases expression1
tetrabromobisphenol Aincreases expression1
tetrachlorodianincreases expression1
deguelinincreases expression1
4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamideaffects cotreatment, decreases expression1
2,2’,4,4’-tetrabromodiphenyl etherincreases expression1
dorsomorphinaffects cotreatment, decreases expression1
MRK 003decreases expression1
jinfukangaffects cotreatment, decreases expression1
Panobinostataffects cotreatment, decreases expression1
Acetaminophenincreases expression1
Arsenatesincreases expression, affects cotreatment1
Benzo(a)pyreneincreases methylation1
Camptothecindecreases methylation1
Carbamazepineaffects expression1
Chelating Agentsincreases expression, affects binding1
Cisplatinaffects cotreatment, decreases expression1

ChEMBL screening assays

1 unique, capped per target: 1 binding

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL4376175BindingBinding affinity to recombinant human Frizzled-8 (Ala25 to Pro172 residues)/human IgG1 chimeric protein expressed in CHO cells assessed as dissociation rate constant by SPR assayLead Optimization Yields High Affinity Frizzled 7-Targeting Peptides That Modulate Clostridium difficile Toxin B Pathogenicity in Epithelial Cells. — J Med Chem

Cellosaurus cell lines

3 cell lines: 3 cancer cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_E0DJUbigene HeLa FZD8 KOCancer cell lineFemale
CVCL_SP23HAP1 FZD8 (-) 1Cancer cell lineMale
CVCL_SP24HAP1 FZD8 (-) 2Cancer cell lineMale

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.