FZD9
gene geneOn this page
Also known as FZD3CD349
Summary
FZD9 (frizzled class receptor 9, HGNC:4047) is a protein-coding gene on chromosome 7q11.23, encoding Frizzled-9 (O00144). Receptor for WNT2 that is coupled to the beta-catenin canonical signaling pathway, which leads to the activation of disheveled proteins, inhibition of GSK-3 kinase, nuclear accumulation of beta-catenin and activation of Wnt target genes.
Members of the ‘frizzled’ gene family encode 7-transmembrane domain proteins that are receptors for Wnt signaling proteins. The FZD9 gene is located within the Williams syndrome common deletion region of chromosome 7, and heterozygous deletion of the FZD9 gene may contribute to the Williams syndrome phenotype. FZD9 is expressed predominantly in brain, testis, eye, skeletal muscle, and kidney.
Source: NCBI Gene 8326 — RefSeq curated summary.
At a glance
- GWAS associations: 11
- Clinical variants (ClinVar): 77 total — 1 pathogenic
- Druggable target: yes
- MANE Select transcript:
NM_003508
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:4047 |
| Approved symbol | FZD9 |
| Name | frizzled class receptor 9 |
| Location | 7q11.23 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FZD3, CD349 |
| Ensembl gene | ENSG00000188763 |
| Ensembl biotype | protein_coding |
| OMIM | 601766 |
| Entrez | 8326 |
Gene structure
Transcript identifiers
Ensembl transcripts: 1 — 1 protein_coding
ENST00000344575
RefSeq mRNA: 1 — MANE Select: NM_003508
NM_003508
CCDS: CCDS5548
Canonical transcript exons
ENST00000344575 — 1 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001387101 | 73433778 | 73436120 |
Expression profiles
Bgee: expression breadth ubiquitous, 138 present calls, max score 87.29.
FANTOM5 (CAGE): breadth broad, TPM avg 2.2319 / max 164.0933, expressed in 721 samples.
FANTOM5 promoters (1 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 79008 | 2.2319 | 721 |
Top tissues by expression
277 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| cartilage tissue | UBERON:0002418 | 87.29 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 76.90 | gold quality |
| gastrocnemius | UBERON:0001388 | 76.23 | gold quality |
| muscle of leg | UBERON:0001383 | 74.53 | gold quality |
| muscle organ | UBERON:0001630 | 71.34 | gold quality |
| amygdala | UBERON:0001876 | 69.54 | gold quality |
| cingulate cortex | UBERON:0003027 | 68.17 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 67.96 | gold quality |
| triceps brachii | UBERON:0001509 | 67.24 | gold quality |
| skeletal muscle tissue of biceps brachii | UBERON:0004502 | 67.19 | gold quality |
| prefrontal cortex | UBERON:0000451 | 66.84 | gold quality |
| gluteal muscle | UBERON:0002000 | 66.81 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 66.50 | gold quality |
| hypothalamus | UBERON:0001898 | 66.37 | gold quality |
| right frontal lobe | UBERON:0002810 | 66.27 | gold quality |
| putamen | UBERON:0001874 | 64.71 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 64.37 | gold quality |
| neocortex | UBERON:0001950 | 64.28 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 64.06 | gold quality |
| spinal cord | UBERON:0002240 | 64.00 | gold quality |
| frontal cortex | UBERON:0001870 | 63.82 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 63.79 | gold quality |
| caudate nucleus | UBERON:0001873 | 62.99 | gold quality |
| pituitary gland | UBERON:0000007 | 62.89 | gold quality |
| tibia | UBERON:0000979 | 62.82 | silver quality |
| cerebral cortex | UBERON:0000956 | 62.77 | gold quality |
| temporal lobe | UBERON:0001871 | 62.63 | gold quality |
| forebrain | UBERON:0001890 | 62.60 | gold quality |
| cortical plate | UBERON:0005343 | 62.59 | gold quality |
| olfactory bulb | UBERON:0002264 | 62.58 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 0.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | no | 0.39 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
1 targets.
| Target | Regulation |
|---|---|
| SPRY4 | Repression |
miRNA regulators (miRDB)
16 targeting FZD9, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6721-5P | 99.93 | 68.92 | 2981 |
| HSA-MIR-95-5P | 99.89 | 72.17 | 3973 |
| HSA-MIR-6132 | 99.60 | 65.83 | 1554 |
| HSA-MIR-6836-5P | 99.60 | 65.62 | 1538 |
| HSA-MIR-12122 | 99.56 | 69.33 | 1672 |
| HSA-MIR-6722-3P | 99.45 | 67.62 | 1919 |
| HSA-MIR-520A-5P | 99.35 | 66.72 | 1632 |
| HSA-MIR-525-5P | 99.35 | 66.85 | 1615 |
| HSA-MIR-499A-3P | 99.18 | 69.20 | 1392 |
| HSA-MIR-499B-3P | 99.18 | 69.27 | 1391 |
| HSA-MIR-1207-3P | 98.99 | 66.22 | 1532 |
| HSA-MIR-6876-3P | 98.97 | 65.69 | 765 |
| HSA-MIR-626 | 98.89 | 66.21 | 762 |
| HSA-MIR-2115-5P | 98.66 | 68.07 | 1191 |
| HSA-MIR-6823-3P | 95.45 | 66.14 | 704 |
| HSA-MIR-2114-3P | 95.45 | 66.11 | 579 |
Literature-anchored findings (GeneRIF, showing 10)
- transfection of Fzd-9 into a Wnt-7a-insensitive NSCLC cell line established Wnt-7a sensitivity (PMID:15705594)
- ERK5-dependent activation of PPARgamma represents a major effector pathway mediating the anti-tumorigenic effects of Wnt 7a and Fzd 9 in non-small cell lung cancer cells (PMID:16835228)
- Aberrant DNA methylation of frizzled 9 protein is associated with myelodysplastic syndrome progression to acute myeloid leukemia. (PMID:18832655)
- The results suggest that WNT2 could act through its receptor FZD9 to regulate the beta-CATENIN pathway in cumulus cells, recruiting beta-CATENIN into plasma membranes and promoting the formation of adherens junctions involving CDH1. (PMID:19038973)
- SiRNA of frizzled-9 suppresses proliferation and motility of hepatoma cells. (PMID:19724923)
- The presence of nanog, Oct-4, SSEA-1, and SSEA-4 suggests that periodontal ligament mesenchymal stem cells are less differentiated than bone marrow-derived MSCs, and that the frizzled-9/Wnt pathway is important in proliferation and differentiation. (PMID:20458727)
- The activity of the Sprouty4 promoter is increased by Wnt7A/Fzd9 signaling through peroxisome proliferator-activated receptor gamma in lung cancer cells. (PMID:20501643)
- the present study indicated that the methylation profile of the FZD9 gene corresponded to that of a candidate tumorsuppressor gene in acute myeloid leukemia. (PMID:27314612)
- data enforced the evidence that knockdown of c-Fos inhibited cell proliferation, migration, and invasion, and promoted the apoptosis of OS cells accompanied by altered expression of Wnt2 and Fzd9 (PMID:28665975)
- miR-520a-5p regulates Frizzled 9 expression and mediates effects of cigarette smoke and iloprost chemoprevention. (PMID:35149732)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | fzd9b | ENSDARG00000014673 |
| danio_rerio | fzd9a | ENSDARG00000035185 |
| mus_musculus | Fzd9 | ENSMUSG00000049551 |
| rattus_norvegicus | Fzd9 | ENSRNOG00000001452 |
| drosophila_melanogaster | fz3 | FBGN0027343 |
Paralogs (15): FZD3 (ENSG00000104290), SFRP1 (ENSG00000104332), SFRP4 (ENSG00000106483), FZD10 (ENSG00000111432), SFRP5 (ENSG00000120057), SMO (ENSG00000128602), SFRP2 (ENSG00000145423), FZD7 (ENSG00000155760), FZD1 (ENSG00000157240), FRZB (ENSG00000162998), FZD5 (ENSG00000163251), FZD6 (ENSG00000164930), FZD4 (ENSG00000174804), FZD8 (ENSG00000177283), FZD2 (ENSG00000180340)
Protein
Protein identifiers
Frizzled-9 — O00144 (reviewed: O00144)
Alternative names: FzE6
All UniProt accessions (1): O00144
UniProt curated annotations — full annotation on UniProt →
Function. Receptor for WNT2 that is coupled to the beta-catenin canonical signaling pathway, which leads to the activation of disheveled proteins, inhibition of GSK-3 kinase, nuclear accumulation of beta-catenin and activation of Wnt target genes. Plays a role in neuromuscular junction (NMJ) assembly by negatively regulating the clustering of acetylcholine receptors (AChR) through the beta-catenin canonical signaling pathway. May play a role in neural progenitor cells (NPCs) viability through the beta-catenin canonical signaling pathway by negatively regulating cell cycle arrest leading to inhibition of neuron apoptotic process. During hippocampal development, regulates neuroblast proliferation and apoptotic cell death. Controls bone formation through non canonical Wnt signaling mediated via ISG15. Positively regulates bone regeneration through non canonical Wnt signaling.
Subcellular location. Cell membrane.
Tissue specificity. Expressed predominantly in adult and fetal brain, testis, eye, skeletal muscle and kidney. Moderately expressed in pancreas, thyroid, adrenal cortex, small intestine and stomach. Detected in fetal liver and kidney. Expressed in neural progenitor cells.
Post-translational modifications. Ubiquitinated by ZNRF3, leading to its degradation by the proteasome.
Domain organisation. Lys-Thr-X-X-X-Trp motif interacts with the PDZ domain of Dvl (Disheveled) family members and is involved in the activation of the Wnt/beta-catenin signaling pathway. The FZ domain is involved in binding with Wnt ligands.
Miscellaneous. Authors show that FZD9 is responsible for the cellular phenotype found in neural progenitor cells (NPCs) derived from Williams syndrome patients namely increased apoptosis of neural progenitor cells (NPCs).
Similarity. Belongs to the G-protein coupled receptor Fz/Smo family.
RefSeq proteins (1): NP_003499* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000539 | Frizzled/Smoothened_7TM | Domain |
| IPR015526 | Frizzled/SFRP | Family |
| IPR017981 | GPCR_2-like_7TM | Domain |
| IPR020067 | Frizzled_dom | Domain |
| IPR036790 | Frizzled_dom_sf | Homologous_superfamily |
Pfam: PF01392, PF01534
UniProt features (28 total): topological domain 8, transmembrane region 7, disulfide bond 5, region of interest 2, glycosylation site 2, signal peptide 1, chain 1, domain 1, short sequence motif 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O00144-F1 | 81.81 | 0.54 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Disulfide bonds (5): 39–100, 47–93, 84–122, 111–152, 115–139
Glycosylation sites (2): 53, 158
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-373080 | Class B/2 (Secretin family receptors) |
MSigDB gene sets: 586 (showing top):
GOBP_NEUROMUSCULAR_JUNCTION_DEVELOPMENT, GOBP_MORPHOGENESIS_OF_AN_EPITHELIUM, GOBP_MEMBRANE_DEPOLARIZATION, GOBP_NEGATIVE_REGULATION_OF_NEURON_APOPTOTIC_PROCESS, GOBP_EMBRYO_DEVELOPMENT_ENDING_IN_BIRTH_OR_EGG_HATCHING, GOBP_EPITHELIUM_DEVELOPMENT, GOBP_COGNITION, GOBP_BEHAVIOR, GOBP_RESPONSE_TO_ELECTRICAL_STIMULUS, GOBP_B_CELL_ACTIVATION, GCANCTGNY_MYOD_Q6, GOBP_NON_CANONICAL_WNT_SIGNALING_PATHWAY, GOBP_GROWTH, GOCC_CELL_SURFACE, GOBP_REGENERATION
GO Biological Process (25): ossification (GO:0001503), release of cytochrome c from mitochondria (GO:0001836), nervous system development (GO:0007399), neuroblast proliferation (GO:0007405), learning or memory (GO:0007611), B cell differentiation (GO:0030183), positive regulation of bone mineralization (GO:0030501), non-canonical Wnt signaling pathway (GO:0035567), positive regulation of apoptotic process (GO:0043065), negative regulation of neuron apoptotic process (GO:0043524), regulation of cytosolic calcium ion concentration (GO:0051480), regulation of cell cycle (GO:0051726), negative regulation of mitochondrial depolarization (GO:0051902), canonical Wnt signaling pathway (GO:0060070), negative regulation of necroptotic process (GO:0060546), positive regulation of canonical Wnt signaling pathway (GO:0090263), negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway (GO:1901029), regulation of skeletal muscle acetylcholine-gated channel clustering (GO:1904393), negative regulation of skeletal muscle acetylcholine-gated channel clustering (GO:1904394), bone regeneration (GO:1990523), positive regulation of neural precursor cell proliferation (GO:2000179), signal transduction (GO:0007165), cell surface receptor signaling pathway (GO:0007166), G protein-coupled receptor signaling pathway (GO:0007186), Wnt signaling pathway (GO:0016055)
GO Molecular Function (7): G protein-coupled receptor activity (GO:0004930), Wnt-protein binding (GO:0017147), protein homodimerization activity (GO:0042803), Wnt receptor activity (GO:0042813), protein heterodimerization activity (GO:0046982), transmembrane signaling receptor activity (GO:0004888), protein binding (GO:0005515)
GO Cellular Component (10): obsolete extracellular space (GO:0005615), cytoplasm (GO:0005737), endoplasmic reticulum membrane (GO:0005789), Golgi apparatus (GO:0005794), plasma membrane (GO:0005886), cell surface (GO:0009986), membrane (GO:0016020), filopodium membrane (GO:0031527), mitochondrial membrane (GO:0031966), perinuclear region of cytoplasm (GO:0048471)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| GPCR ligand binding | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| Wnt signaling pathway | 3 |
| skeletal muscle acetylcholine-gated channel clustering | 2 |
| transmembrane signaling receptor activity | 2 |
| protein dimerization activity | 2 |
| organelle membrane | 2 |
| cytoplasm | 2 |
| multicellular organismal process | 1 |
| apoptotic mitochondrial changes | 1 |
| apoptotic signaling pathway | 1 |
| system development | 1 |
| generation of neurons | 1 |
| neural precursor cell proliferation | 1 |
| behavior | 1 |
| cognition | 1 |
| lymphocyte differentiation | 1 |
| B cell activation | 1 |
| bone mineralization | 1 |
| regulation of bone mineralization | 1 |
| positive regulation of ossification | 1 |
| positive regulation of biomineral tissue development | 1 |
| apoptotic process | 1 |
| regulation of apoptotic process | 1 |
| positive regulation of programmed cell death | 1 |
| negative regulation of apoptotic process | 1 |
| regulation of neuron apoptotic process | 1 |
| neuron apoptotic process | 1 |
| intracellular calcium ion homeostasis | 1 |
| cell cycle | 1 |
| regulation of cellular process | 1 |
| mitochondrial depolarization | 1 |
| regulation of mitochondrial depolarization | 1 |
| negative regulation of membrane depolarization | 1 |
| regulation of necroptotic process | 1 |
| negative regulation of programmed necrotic cell death | 1 |
| necroptotic process | 1 |
| positive regulation of Wnt signaling pathway | 1 |
| canonical Wnt signaling pathway | 1 |
| regulation of canonical Wnt signaling pathway | 1 |
| negative regulation of organelle organization | 1 |
Protein interactions and networks
STRING
1368 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| FZD9 | WNT5A | P41221 | 994 |
| FZD9 | WNT7A | O00755 | 955 |
| FZD9 | WNT11 | O96014 | 952 |
| FZD9 | WNT2 | P09544 | 897 |
| FZD9 | CELSR3 | Q9NYQ7 | 858 |
| FZD9 | WNT4 | P56705 | 858 |
| FZD9 | VANGL2 | Q9ULK5 | 848 |
| FZD9 | WNT5B | Q9H1J7 | 846 |
| FZD9 | WNT7B | P56706 | 832 |
| FZD9 | WNT3A | P56704 | 825 |
| FZD9 | FKBP6 | O75344 | 797 |
| FZD9 | FKBP10 | Q96AY3 | 788 |
| FZD9 | WNT6 | Q9Y6F9 | 787 |
| FZD9 | WNT2B | Q93097 | 777 |
| FZD9 | CTNNB1 | P35222 | 773 |
IntAct
2 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| FZD9 | tcdB | psi-mi:“MI:0407”(direct interaction) | 0.440 |
BioGRID (6): FZD9 (Two-hybrid), KRTAP10-3 (Two-hybrid), FZD9 (Two-hybrid), TMEM79 (Affinity Capture-Western), FZD9 (Affinity Capture-Western), FZD9 (Cross-Linking-MS (XL-MS))
ESM2 similar proteins: B3DIG4, O00144, O57328, O57329, O70421, O75084, O93274, P18537, P23385, P27115, P27808, P41594, P55013, P58421, P97772, Q08463, Q08464, Q13255, Q13467, Q14332, Q24760, Q498S8, Q5BL72, Q5RH73, Q61090, Q61091, Q6NVG7, Q6P9A2, Q6PA90, Q8AVJ9, Q8BKG4, Q8CHL0, Q8IYK4, Q8K4C8, Q9DEB5, Q9EQD0, Q9H461, Q9I9M5, Q9IA02, Q9IA06
Diamond homologs: A0A0K3AWM6, B3DIG4, G5ECQ2, O00144, O19116, O42579, O57328, O57329, O60353, O70421, O75084, O93274, P18537, P58421, P97299, P97401, Q08463, Q08464, Q13467, Q14332, Q24760, Q498S8, Q5BL72, Q5RCN4, Q5RF67, Q5T4F7, Q61086, Q61088, Q61089, Q61090, Q61091, Q6FHJ7, Q7YRN1, Q80YN4, Q863H1, Q8AVJ9, Q8BKG4, Q8C4U3, Q8CHL0, Q8K4C8
SIGNOR signaling
2 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| FZD9 | “down-regulates quantity by repression” | SPRY4 | “transcriptional regulation” |
| FZD9 | down-regulates | Proliferation |
Disease & clinical
Clinical variants and AI predictions
ClinVar
77 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 0 |
| Uncertain significance | 74 |
| Likely benign | 2 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (1)
| Variant ID | HGVS | Classification |
|---|---|---|
| 160898 | GRCh38/hg38 7q11.23(chr7:73352304-74719013)x1 | Pathogenic |
SpliceAI
8 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 7:73434771:T:A | acceptor_gain | 0.3400 |
| 7:73435285:C:G | acceptor_gain | 0.3100 |
| 7:73436086:T:TA | acceptor_gain | 0.2800 |
| 7:73436078:C:CA | acceptor_gain | 0.2700 |
| 7:73435509:G:GT | donor_gain | 0.2300 |
| 7:73435482:G:GT | donor_gain | 0.2200 |
| 7:73435291:CA:C | acceptor_gain | 0.2100 |
| 7:73435292:AA:A | acceptor_gain | 0.2100 |
AlphaMissense
3807 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 7:73434146:T:A | C47S | 1.000 |
| 7:73434147:G:C | C47S | 1.000 |
| 7:73434162:A:G | Y52C | 1.000 |
| 7:73434234:T:G | F76C | 1.000 |
| 7:73434276:T:G | F90C | 1.000 |
| 7:73434279:T:G | F91C | 1.000 |
| 7:73434284:T:A | C93S | 1.000 |
| 7:73434285:G:A | C93Y | 1.000 |
| 7:73434285:G:C | C93S | 1.000 |
| 7:73434286:C:G | C93W | 1.000 |
| 7:73434339:G:A | C111Y | 1.000 |
| 7:73434371:T:A | C122S | 1.000 |
| 7:73434372:G:C | C122S | 1.000 |
| 7:73434404:T:A | W133R | 1.000 |
| 7:73434404:T:C | W133R | 1.000 |
| 7:73434406:G:C | W133C | 1.000 |
| 7:73434406:G:T | W133C | 1.000 |
| 7:73434461:T:A | C152S | 1.000 |
| 7:73434462:G:C | C152S | 1.000 |
| 7:73434146:T:C | C47R | 0.999 |
| 7:73434147:G:A | C47Y | 0.999 |
| 7:73434148:C:G | C47W | 0.999 |
| 7:73434161:T:C | Y52H | 0.999 |
| 7:73434161:T:G | Y52D | 0.999 |
| 7:73434171:C:T | T55I | 0.999 |
| 7:73434184:C:A | N59K | 0.999 |
| 7:73434184:C:G | N59K | 0.999 |
| 7:73434233:T:C | F76L | 0.999 |
| 7:73434235:C:A | F76L | 0.999 |
| 7:73434235:C:G | F76L | 0.999 |
dbSNP variants (sampled 300 via entrez): RS1001342807 (7:73432704 G>A), RS1003019704 (7:73435552 C>A), RS1005658496 (7:73436286 G>A), RS1007825283 (7:73433297 A>G), RS1007903090 (7:73432845 C>A,T), RS1010561681 (7:73432782 A>G), RS1011824273 (7:73435634 C>A,G,T), RS1014068381 (7:73431921 C>T), RS1014743636 (7:73432186 T>C), RS1015078235 (7:73434675 G>A), RS1015566329 (7:73433544 A>G), RS1015831143 (7:73436289 T>A), RS1017877294 (7:73433346 G>A), RS1019557484 (7:73435966 C>A,T), RS1019630729 (7:73435677 C>G,T)
Disease associations
OMIM: gene MIM:601766 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
11 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST006119_7 | Protein C levels | 4.000000e-09 |
| GCST010133_5 | Lamb consumption | 5.000000e-09 |
| GCST010134_3 | Non-oily fish consumption | 3.000000e-09 |
| GCST010143_15 | Meat-related diet | 4.000000e-08 |
| GCST010143_21 | Meat-related diet | 3.000000e-11 |
| GCST010242_246 | HDL cholesterol levels | 1.000000e-08 |
| GCST010725_13 | Malaria | 8.000000e-06 |
| GCST010725_74 | Malaria | 6.000000e-06 |
| GCST010725_91 | Malaria | 7.000000e-06 |
| GCST90020026_555 | Hip index | 4.000000e-10 |
| GCST90020028_163 | Hip circumference adjusted for BMI | 1.000000e-09 |
EFO canonical traits (4, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004633 | protein C measurement |
| EFO:0008111 | diet measurement |
| EFO:0004612 | high density lipoprotein cholesterol measurement |
| EFO:0008039 | BMI-adjusted hip circumference |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL4523116 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: gpcr — Class Frizzled GPCRs
CTD chemical–gene interactions
27 total (human), top 27 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | decreases expression, affects cotreatment | 2 |
| FR900359 | decreases phosphorylation | 1 |
| terbufos | increases methylation | 1 |
| 2,4,5,2’,4’,5’-hexachlorobiphenyl | decreases expression | 1 |
| 3,4,5,3’,4’-pentachlorobiphenyl | decreases expression | 1 |
| perfluorooctanoic acid | decreases expression | 1 |
| evodiamine | increases expression | 1 |
| 2-palmitoylglycerol | increases expression | 1 |
| abrine | increases expression | 1 |
| 2,2’,4,4’-tetrabromodiphenyl ether | decreases expression | 1 |
| (+)-JQ1 compound | increases expression | 1 |
| Sunitinib | increases expression | 1 |
| Acetaminophen | increases expression | 1 |
| Benzo(a)pyrene | affects expression | 1 |
| Dexamethasone | affects cotreatment, decreases expression | 1 |
| Fonofos | increases methylation | 1 |
| Estradiol | increases expression | 1 |
| Indomethacin | affects cotreatment, decreases expression | 1 |
| Niclosamide | decreases expression | 1 |
| Parathion | increases methylation | 1 |
| Tobacco Smoke Pollution | increases expression | 1 |
| Urethane | increases expression | 1 |
| Valproic Acid | increases methylation | 1 |
| 1-Methyl-3-isobutylxanthine | affects cotreatment, decreases expression | 1 |
| Mifepristone | increases expression | 1 |
| Cadmium Chloride | decreases expression | 1 |
| Acrylamide | decreases expression | 1 |
ChEMBL screening assays
1 unique, capped per target: 1 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4376177 | Binding | Binding affinity to Frizzled-9 CRD (unknown origin) | Lead Optimization Yields High Affinity Frizzled 7-Targeting Peptides That Modulate Clostridium difficile Toxin B Pathogenicity in Epithelial Cells. — J Med Chem |
Cellosaurus cell lines
7 cell lines: 6 cancer cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_D7QC | Ubigene A-549 FZD9 KO | Cancer cell line | Male |
| CVCL_D9F8 | Ubigene HEK293 FZD9 KO | Transformed cell line | Female |
| CVCL_SP25 | HAP1 FZD9 (-) 1 | Cancer cell line | Male |
| CVCL_SP26 | HAP1 FZD9 (-) 2 | Cancer cell line | Male |
| CVCL_SP27 | HAP1 FZD9 (-) 3 | Cancer cell line | Male |
| CVCL_SP28 | HAP1 FZD9 (-) 4 | Cancer cell line | Male |
| CVCL_SP29 | HAP1 FZD9 (-) 5 | Cancer cell line | Male |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.