GABBR2
geneOn this page
Also known as HG20GABABR2GPRC3B
Summary
GABBR2 (gamma-aminobutyric acid type B receptor subunit 2, HGNC:4507) is a protein-coding gene on chromosome 9q22.33, encoding Gamma-aminobutyric acid type B receptor subunit 2 (O75899). Component of a heterodimeric G-protein coupled receptor for GABA, formed by GABBR1 and GABBR2.
The multi-pass membrane protein encoded by this gene belongs to the G-protein coupled receptor 3 family and GABA-B receptor subfamily. The GABA-B receptors inhibit neuronal activity through G protein-coupled second-messenger systems, which regulate the release of neurotransmitters, and the activity of ion channels and adenylyl cyclase. This receptor subunit forms an active heterodimeric complex with GABA-B receptor subunit 1, neither of which is effective on its own. Allelic variants of this gene have been associated with nicotine dependence.
Source: NCBI Gene 9568 — RefSeq curated summary.
At a glance
- Gene–disease (curated): neurodevelopmental disorder with poor language and loss of hand skills (Strong, GenCC) — +3 more curated relationships
- GWAS associations: 12
- Clinical variants (ClinVar): 1,152 total — 4 pathogenic, 8 likely-pathogenic
- Phenotypes (HPO): 114
- Druggable target: yes — 4 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_005458
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:4507 |
| Approved symbol | GABBR2 |
| Name | gamma-aminobutyric acid type B receptor subunit 2 |
| Location | 9q22.33 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | HG20, GABABR2, GPRC3B |
| Ensembl gene | ENSG00000136928 |
| Ensembl biotype | protein_coding |
| OMIM | 607340 |
| Entrez | 9568 |
Gene structure
Transcript identifiers
Ensembl transcripts: 14 — 7 protein_coding_CDS_not_defined, 5 protein_coding, 2 retained_intron
ENST00000259455, ENST00000477471, ENST00000634227, ENST00000634314, ENST00000634354, ENST00000634457, ENST00000634919, ENST00000635462, ENST00000636575, ENST00000637410, ENST00000637717, ENST00000638001, ENST00000931526, ENST00000947376
RefSeq mRNA: 1 — MANE Select: NM_005458
NM_005458
CCDS: CCDS6736
Canonical transcript exons
ENST00000259455 — 19 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000926518 | 98406081 | 98406141 |
| ENSE00000983183 | 98394175 | 98394255 |
| ENSE00000983184 | 98388854 | 98389004 |
| ENSE00000983185 | 98385640 | 98385772 |
| ENSE00000983186 | 98371464 | 98371571 |
| ENSE00000983187 | 98362715 | 98362837 |
| ENSE00000983188 | 98311095 | 98311205 |
| ENSE00000983189 | 98306121 | 98306345 |
| ENSE00000983190 | 98303241 | 98303423 |
| ENSE00000983191 | 98299224 | 98299353 |
| ENSE00000983192 | 98293785 | 98293902 |
| ENSE00001022837 | 98577935 | 98578072 |
| ENSE00001038234 | 98453981 | 98454217 |
| ENSE00001038246 | 98473146 | 98473346 |
| ENSE00001185221 | 98288109 | 98290749 |
| ENSE00001263335 | 98708417 | 98708935 |
| ENSE00003483264 | 98496413 | 98496514 |
| ENSE00003539642 | 98541873 | 98542043 |
| ENSE00003638189 | 98480932 | 98480997 |
Expression profiles
Bgee: expression breadth ubiquitous, 193 present calls, max score 99.72.
FANTOM5 (CAGE): breadth broad, TPM avg 3.9201 / max 173.9651, expressed in 367 samples.
FANTOM5 promoters (13 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 101691 | 2.6872 | 257 |
| 101698 | 0.3870 | 105 |
| 101692 | 0.2139 | 77 |
| 101694 | 0.1806 | 93 |
| 101693 | 0.0874 | 44 |
| 101696 | 0.0631 | 29 |
| 101690 | 0.0571 | 35 |
| 101697 | 0.0553 | 27 |
| 101682 | 0.0479 | 20 |
| 101695 | 0.0449 | 28 |
Top tissues by expression
277 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| Brodmann (1909) area 23 | UBERON:0013554 | 99.72 | gold quality |
| lateral nuclear group of thalamus | UBERON:0002736 | 99.71 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 99.60 | gold quality |
| endothelial cell | CL:0000115 | 98.97 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 98.92 | gold quality |
| Brodmann (1909) area 46 | UBERON:0006483 | 98.80 | gold quality |
| Brodmann (1909) area 10 | UBERON:0013541 | 98.70 | gold quality |
| orbitofrontal cortex | UBERON:0004167 | 98.68 | gold quality |
| parietal lobe | UBERON:0001872 | 98.57 | gold quality |
| postcentral gyrus | UBERON:0002581 | 98.55 | gold quality |
| frontal pole | UBERON:0002795 | 98.43 | gold quality |
| CA1 field of hippocampus | UBERON:0003881 | 98.43 | gold quality |
| primary visual cortex | UBERON:0002436 | 98.23 | gold quality |
| occipital lobe | UBERON:0002021 | 98.15 | gold quality |
| entorhinal cortex | UBERON:0002728 | 98.01 | gold quality |
| cerebellar vermis | UBERON:0004720 | 97.48 | gold quality |
| pons | UBERON:0000988 | 97.10 | gold quality |
| substantia nigra pars compacta | UBERON:0001965 | 96.86 | gold quality |
| substantia nigra pars reticulata | UBERON:0001966 | 95.95 | gold quality |
| frontal cortex | UBERON:0001870 | 95.90 | gold quality |
| frontal lobe | UBERON:0016525 | 95.90 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 95.48 | gold quality |
| paraflocculus | UBERON:0005351 | 95.37 | gold quality |
| prefrontal cortex | UBERON:0000451 | 95.34 | gold quality |
| neocortex | UBERON:0001950 | 95.05 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 94.82 | gold quality |
| cerebral cortex | UBERON:0000956 | 94.79 | gold quality |
| cortical plate | UBERON:0005343 | 94.64 | gold quality |
| adult organism | UBERON:0007023 | 94.34 | gold quality |
| right frontal lobe | UBERON:0002810 | 94.06 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-25 | yes | 35.34 |
| E-ANND-3 | yes | 5.36 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
241 targeting GABBR2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6867-5P | 100.00 | 82.21 | 3464 |
| HSA-MIR-200B-3P | 100.00 | 73.31 | 2693 |
| HSA-MIR-200C-3P | 100.00 | 73.35 | 2685 |
| HSA-MIR-429 | 100.00 | 73.44 | 2698 |
| HSA-MIR-9-5P | 100.00 | 72.28 | 2361 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-4283 | 100.00 | 66.42 | 2097 |
| HSA-MIR-7110-3P | 100.00 | 73.18 | 2486 |
| HSA-MIR-3924 | 100.00 | 72.09 | 2394 |
| HSA-MIR-4500 | 99.99 | 72.72 | 2367 |
| HSA-MIR-371A-3P | 99.99 | 66.77 | 91 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-4531 | 99.99 | 69.70 | 3181 |
| HSA-LET-7A-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7B-5P | 99.98 | 72.31 | 1790 |
| HSA-LET-7C-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7E-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7F-5P | 99.98 | 72.56 | 1784 |
| HSA-LET-7G-5P | 99.98 | 72.37 | 1784 |
| HSA-LET-7I-5P | 99.98 | 72.37 | 1788 |
| HSA-MIR-98-5P | 99.98 | 72.33 | 1787 |
| HSA-MIR-4650-5P | 99.98 | 64.69 | 999 |
| HSA-MIR-507 | 99.97 | 70.11 | 1915 |
| HSA-MIR-3148 | 99.97 | 75.06 | 6478 |
| HSA-MIR-548AJ-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-548X-3P | 99.96 | 73.38 | 5345 |
| HSA-LET-7D-5P | 99.96 | 71.76 | 1632 |
| HSA-MIR-4458 | 99.96 | 71.64 | 1650 |
| HSA-MIR-5688 | 99.96 | 73.23 | 4504 |
| HSA-MIR-495-3P | 99.96 | 72.81 | 4197 |
Literature-anchored findings (GeneRIF, showing 33)
- Increased expression of GABA(B) receptor subtype 2 indicates augmented presynaptic inhibition of glutamate release as a possible protective mechanism in temporal lobe epilepsy. (PMID:14625043)
- GABA(B) receptor subunit GABA(B)R2 is found on the same neurons and follows the same distribution patterns in the basal ganglia as the GABABR1 receptor subunit. (PMID:14961561)
- Association of the GABA(B)R1 with the GABA(A) receptor gamma2S subunit robustly promotes cell surface expression of GABA(B)R1 in the absence of GABA(B)R2, that is usually required for efficient trafficking of GABA(B)R1 to the cell surface. (PMID:14966130)
- The GABA(B) receptor may be present as a heterodimer with subunits of GABA(B1) and GABA(B2) in the human colon. (PMID:14978362)
- Functional GABA(B) receptors are expressed in human airway smooth muscle cells (PMID:16829628)
- GABA(B) receptor stability and signaling can be modulated via GABA(B) receptor subunit 2 interactions with the PDZ scaffold protein Mupp1, which may contribute to cell-specific regulation of GABA(B) receptors in the central nervous system. (PMID:17145756)
- Levels of GABBR1 are significantly decreased in the cerebellum of patients with autism. (PMID:19002745)
- variants of GABBR1 and GABBR2 are associated with nicotine dependence in European- and African-American populations (PMID:19763258)
- GABA(B) receptor subunit 2 levels are significantly decreased in the cingulate cortex and fusiform gyrus of autism patients compared to controls. (PMID:20557420)
- The results of this study provided evidence of Gabbr2 Deficit in schizophrenia and mood disorders. (PMID:21303731)
- Gamma-aminobutyric acid type B (GABA(B)) receptor internalization is regulated by the R2 subunit. (PMID:21724853)
- The results indicate that there may be specific GABA receptor gene expression variation in migraine, particularly involving the GABRA3 and GABBR2 genes. (PMID:21971078)
- and GABABR2 proteins are reduced in the prefrontal cortex of aged rats but these reductions are not associated with spatial learning abilities. (PMID:22169202)
- Results show that GABA(B) receptors R1 and R2 must be activated for the modulation of N-type (Ca(v)2.2) calcium channels by analgesic alpha-conotoxins Vc1.1 and RgIA. (PMID:22613715)
- The GABBR2 ectodomain adopts a constitutively open conformation, suggesting a structural asymmetry in the active state of GABA(B) receptor that is unique to the GABAergic system. (PMID:22660477)
- gamma-aminobutyric acidB receptor proteasomal degradation is mediated by the interaction of the GABAB2 C terminus with the proteasomal ATPase Rtp6 and regulated by neuronal activity (PMID:24482233)
- GABBR2 receptors are expressed in aortic smooth muscle cells and regulate the [Ca(2+)]i via a Gi/o-coupled receptor pathway and a phospholipase C activation pathway. (PMID:24682435)
- The endoplasmic reticulum retention signal of GBR1 is not part of the core coiled-coil structure, suggesting that it is sterically shielded by GBR2 upon heterodimer formation. (PMID:24778228)
- Putative GABAA and ASIC1a channels functionally interact with each other, possibly via an inter-molecular association by forming a novel protein complex. (PMID:24923912)
- The rare variants in GABBR2 were significantly associated with smoking status. (PMID:25450229)
- a GABBR2 variant, predicted to be disease-causative, was significantly associated with corticospinal excitability at corrected levels. A subsequent uncorrected exploratory analysis revealed associations between GABBR2, GABRA2 and DRD2 variants with transcranial magnetic stimulation measures of corticospinal excitability and cortical inhibition in Huntington’s disease, as well as with age at onset. (PMID:27033668)
- There was no statistically significant association for the two SNPs of the GABBR1 gene (rs29230 and rs29267). However, a significant difference between AUD individuals and controls was observed at genotype level for rs2900512 of GABBR2 gene. (PMID:28118741)
- Using a ligand-guided approach, eight GABAB2 homology models have been chosen as possible structural representatives of the transmembrane domain of the GABAB2 subunit. (PMID:28323850)
- We demonstrated that GABBR2 gene might be a novel potential epigenetic treatment target with induction erlotinib treatment for stage IIIa (N2) EGFR 19 deletion lung adenocarcinoma (PMID:28490462)
- GABBR2 is a genetic factor that determines Rett syndrome- or epileptic encephalopathy-like phenotype expression depending on the variant positions. GABBR2-mediated gamma-aminobutyric acid signaling is a crucial factor in determining the severity and nature of neurodevelopmental phenotypes. (PMID:28856709)
- Missense Mutation in GABBR2 gene is associated with Neurodevelopmental Disorders. (PMID:28867141)
- GABA B receptor expression in myometrium (PMID:30343129)
- Structural basis of the activation of a metabotropic GABA receptor. (PMID:32555460)
- Structures of metabotropic GABAB receptor. (PMID:32580208)
- Structure of human GABAB receptor in an inactive state. (PMID:32581365)
- Structural Basis for Activation of the Heterodimeric GABAB Receptor. (PMID:33058878)
- A preliminary genetic association study of GAD1 and GABAB receptor genes in patients with treatment-resistant schizophrenia. (PMID:34845648)
- GABBR2 as a Downstream Effector of the Androgen Receptor Induces Cisplatin Resistance in Bladder Cancer. (PMID:37762034)
Cross-species orthologs
6 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | gabbr2 | ENSDARG00000061042 |
| danio_rerio | ENSDARG00000111795 | |
| mus_musculus | Gabbr2 | ENSMUSG00000039809 |
| rattus_norvegicus | Gabbr2 | ENSRNOG00000008431 |
| drosophila_melanogaster | GABA-B-R2 | FBGN0027575 |
| caenorhabditis_elegans | WBGENE00022675 |
Paralogs (2): GPR156 (ENSG00000175697), GABBR1 (ENSG00000204681)
Protein
Protein identifiers
Gamma-aminobutyric acid type B receptor subunit 2 — O75899 (reviewed: O75899)
Alternative names: G-protein coupled receptor 51, HG20
All UniProt accessions (4): A0A0U1RR59, A0A1B0GW60, O75899, H9NIL8
UniProt curated annotations — full annotation on UniProt →
Function. Component of a heterodimeric G-protein coupled receptor for GABA, formed by GABBR1 and GABBR2. Within the heterodimeric GABA receptor, only GABBR1 seems to bind agonists, while GABBR2 mediates coupling to G proteins. Ligand binding causes a conformation change that triggers signaling via guanine nucleotide-binding proteins (G proteins) and modulates the activity of down-stream effectors, such as adenylate cyclase. Signaling inhibits adenylate cyclase, stimulates phospholipase A2, activates potassium channels, inactivates voltage-dependent calcium-channels and modulates inositol phospholipid hydrolysis. Plays a critical role in the fine-tuning of inhibitory synaptic transmission. Pre-synaptic GABA receptor inhibits neurotransmitter release by down-regulating high-voltage activated calcium channels, whereas postsynaptic GABA receptor decreases neuronal excitability by activating a prominent inwardly rectifying potassium (Kir) conductance that underlies the late inhibitory postsynaptic potentials. Not only implicated in synaptic inhibition but also in hippocampal long-term potentiation, slow wave sleep, muscle relaxation and antinociception.
Subunit / interactions. Heterodimer of GABBR1 and GABBR2. Homodimers may form, but are inactive. Interacts (via C-terminus) with ATF4 (via leucine zipper domain).
Subcellular location. Cell membrane. Postsynaptic cell membrane.
Tissue specificity. Highly expressed in brain, especially in cerebral cortex, thalamus, hippocampus, frontal, occipital and temporal lobe, occipital pole and cerebellum, followed by corpus callosum, caudate nucleus, spinal cord, amygdala and medulla. Weakly expressed in heart, testis and skeletal muscle.
Disease relevance. Neurodevelopmental disorder with poor language and loss of hand skills (NDPLHS) [MIM:617903] An autosomal dominant disorder characterized by psychomotor developmental stagnation or regression. NDPLHS manifest in the first years of life as loss of purposeful hand movements, loss of language, and intellectual disability. The disease is caused by variants affecting the gene represented in this entry. Developmental and epileptic encephalopathy 59 (DEE59) [MIM:617904] A form of epileptic encephalopathy, a heterogeneous group of severe early-onset epilepsies characterized by refractory seizures, neurodevelopmental impairment, and poor prognosis. Development is normal prior to seizure onset, after which cognitive and motor delays become apparent. DEE59 is an autosomal dominant condition characterized by onset of refractory seizures in early infancy. The disease is caused by variants affecting the gene represented in this entry.
Domain organisation. Alpha-helical parts of the C-terminal intracellular region mediate heterodimeric interaction with GABBR1.
Similarity. Belongs to the G-protein coupled receptor 3 family. GABA-B receptor subfamily.
RefSeq proteins (1): NP_005449* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000337 | GPCR_3 | Family |
| IPR001828 | ANF_lig-bd_rcpt | Domain |
| IPR002455 | GPCR3_GABA-B | Family |
| IPR002457 | GPCR_3_GABA_rcpt_B2 | Family |
| IPR017978 | GPCR_3_C | Domain |
| IPR017979 | GPCR_3_CS | Conserved_site |
| IPR028082 | Peripla_BP_I | Homologous_superfamily |
| IPR041689 | GBR2_CC | Domain |
Pfam: PF00003, PF01094, PF18455
UniProt features (115 total): helix 28, strand 25, turn 12, modified residue 9, topological domain 8, sequence variant 8, transmembrane region 7, glycosylation site 5, sequence conflict 4, disulfide bond 3, signal peptide 1, chain 1, region of interest 1, coiled-coil region 1, compositionally biased region 1, mutagenesis site 1
Structure
Experimental structures (PDB)
26 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 4PAS | X-RAY DIFFRACTION | 1.62 |
| 4MS4 | X-RAY DIFFRACTION | 1.9 |
| 4MR7 | X-RAY DIFFRACTION | 2.15 |
| 4MR8 | X-RAY DIFFRACTION | 2.15 |
| 4MQF | X-RAY DIFFRACTION | 2.22 |
| 4MS1 | X-RAY DIFFRACTION | 2.25 |
| 4MQE | X-RAY DIFFRACTION | 2.35 |
| 4MR9 | X-RAY DIFFRACTION | 2.35 |
| 6OCP | X-RAY DIFFRACTION | 2.35 |
| 4F11 | X-RAY DIFFRACTION | 2.38 |
| 4MS3 | X-RAY DIFFRACTION | 2.5 |
| 4MRM | X-RAY DIFFRACTION | 2.86 |
| 7C7S | ELECTRON MICROSCOPY | 2.9 |
| 7C7Q | ELECTRON MICROSCOPY | 3 |
| 4F12 | X-RAY DIFFRACTION | 3.02 |
| 6M8R | X-RAY DIFFRACTION | 3.2 |
| 6WIV | ELECTRON MICROSCOPY | 3.3 |
| 7EB2 | ELECTRON MICROSCOPY | 3.5 |
| 7CUM | ELECTRON MICROSCOPY | 3.52 |
| 6W2X | ELECTRON MICROSCOPY | 3.6 |
| 6UO8 | ELECTRON MICROSCOPY | 3.63 |
| 6VJM | ELECTRON MICROSCOPY | 3.97 |
| 7CA3 | ELECTRON MICROSCOPY | 4.5 |
| 6UO9 | ELECTRON MICROSCOPY | 4.8 |
| 6UOA | ELECTRON MICROSCOPY | 6.3 |
| 7CA5 | ELECTRON MICROSCOPY | 7.6 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O75899-F1 | 78.00 | 0.46 |
Antibody-complex structures (SAbDab): 1 — 7EB2
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (9): 776, 779, 819, 884, 893, 913, 916, 920, 924
Disulfide bonds (3): 108–135, 237–266, 265–302
Glycosylation sites (5): 90, 298, 389, 404, 453
Mutagenesis-validated functional residues (1):
| Position | Phenotype |
|---|---|
| 118 | impairs interaction with gabbr1. decreases signaling via g-proteins. |
Function
Pathways and Gene Ontology
Reactome pathways
5 pathways
| ID | Pathway |
|---|---|
| R-HSA-1296041 | Activation of G protein gated Potassium channels |
| R-HSA-418594 | G alpha (i) signalling events |
| R-HSA-420499 | Class C/3 (Metabotropic glutamate/pheromone receptors) |
| R-HSA-977444 | GABA B receptor activation |
| R-HSA-997272 | Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits |
MSigDB gene sets: 416 (showing top):
GNF2_RTN1, MULLIGHAN_NPM1_SIGNATURE_3_UP, BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN, BENPORATH_ES_WITH_H3K27ME3, TGCACTT_MIR519C_MIR519B_MIR519A, REACTOME_POTASSIUM_CHANNELS, REACTOME_INWARDLY_RECTIFYING_K_CHANNELS, PEREZ_TP63_TARGETS, GOBP_GAMMA_AMINOBUTYRIC_ACID_SIGNALING_PATHWAY, TGACCTY_ERR1_Q2, AP2_Q3, ACTGCAG_MIR173P, GGGTGGRR_PAX4_03, TANG_SENESCENCE_TP53_TARGETS_UP, GOBP_CELL_CELL_SIGNALING
GO Biological Process (8): G protein-coupled receptor signaling pathway (GO:0007186), adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (GO:0007193), negative regulation of adenylate cyclase activity (GO:0007194), gamma-aminobutyric acid signaling pathway (GO:0007214), chemical synaptic transmission (GO:0007268), synaptic transmission, GABAergic (GO:0051932), neuron-glial cell signaling (GO:0150099), signal transduction (GO:0007165)
GO Molecular Function (6): transmembrane signaling receptor activity (GO:0004888), G protein-coupled GABA receptor activity (GO:0004965), protein heterodimerization activity (GO:0046982), G protein-coupled receptor activity (GO:0004930), protein binding (GO:0005515), GABA receptor activity (GO:0016917)
GO Cellular Component (9): cytoplasm (GO:0005737), plasma membrane (GO:0005886), G protein-coupled receptor heterodimeric complex (GO:0038039), neuron projection (GO:0043005), postsynaptic membrane (GO:0045211), GABA receptor complex (GO:1902710), G protein-coupled GABA receptor complex (GO:1902712), membrane (GO:0016020), synapse (GO:0045202)
Reactome top-level categories
Rollup of top-5 pathways:
| Category | Pathways |
|---|---|
| G protein gated Potassium channels | 1 |
| GPCR downstream signalling | 1 |
| GPCR ligand binding | 1 |
| GABA receptor activation | 1 |
| Activation of GABAB receptors | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| G protein-coupled receptor activity | 2 |
| cell-cell signaling | 2 |
| GABA receptor activity | 2 |
| transmembrane signaling receptor activity | 2 |
| cellular anatomical structure | 2 |
| G protein-coupled receptor dimeric complex | 2 |
| signal transduction | 1 |
| adenylate cyclase-modulating G protein-coupled receptor signaling pathway | 1 |
| adenylate cyclase inhibitor activity | 1 |
| adenylate cyclase activity | 1 |
| negative regulation of catalytic activity | 1 |
| regulation of adenylate cyclase activity | 1 |
| anterograde trans-synaptic signaling | 1 |
| chemical synaptic transmission | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| signaling receptor activity | 1 |
| protein dimerization activity | 1 |
| G protein-coupled receptor signaling pathway | 1 |
| binding | 1 |
| intracellular anatomical structure | 1 |
| membrane | 1 |
| cell periphery | 1 |
| plasma membrane bounded cell projection | 1 |
| synaptic membrane | 1 |
| postsynapse | 1 |
| signaling receptor complex | 1 |
| GABA receptor complex | 1 |
| cell junction | 1 |
Protein interactions and networks
STRING
1914 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| GABBR2 | GABBR1 | Q9UBS5 | 985 |
| GABBR2 | CHRNA2 | Q15822 | 768 |
| GABBR2 | JAKMIP1 | Q96N16 | 744 |
| GABBR2 | GABRB3 | P28472 | 724 |
| GABBR2 | A4GALT | Q9NPC4 | 718 |
| GABBR2 | GRIN2B | Q13224 | 699 |
| GABBR2 | SLC17A6 | Q9P2U8 | 684 |
| GABBR2 | CHRNA4 | P43681 | 681 |
| GABBR2 | SLC17A7 | Q9P2U7 | 680 |
| GABBR2 | CHRNB2 | P17787 | 662 |
| GABBR2 | CHRNA5 | P30532 | 660 |
| GABBR2 | GTPBP4 | Q9BZE4 | 643 |
| GABBR2 | KCNJ6 | P48051 | 592 |
| GABBR2 | DRD2 | P14416 | 586 |
| GABBR2 | GABRA1 | P14867 | 586 |
IntAct
32 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| GABBR1 | GABBR2 | psi-mi:“MI:0407”(direct interaction) | 0.790 |
| GABBR2 | GABBR1 | psi-mi:“MI:0407”(direct interaction) | 0.790 |
| GABBR2 | GABBR1 | psi-mi:“MI:0407”(direct interaction) | 0.740 |
| GABBR1 | GABBR2 | psi-mi:“MI:0915”(physical association) | 0.740 |
| KCTD16 | GABBR2 | psi-mi:“MI:0407”(direct interaction) | 0.640 |
| GABBR2 | KCTD16 | psi-mi:“MI:0407”(direct interaction) | 0.640 |
| GABBR2 | NSF | psi-mi:“MI:0915”(physical association) | 0.610 |
| NSF | GABBR2 | psi-mi:“MI:0407”(direct interaction) | 0.610 |
| NSF | GABBR2 | psi-mi:“MI:0403”(colocalization) | 0.610 |
| GABBR2 | GNG2 | psi-mi:“MI:0915”(physical association) | 0.520 |
| GABBR2 | GLP1R | psi-mi:“MI:0915”(physical association) | 0.510 |
| GLP1R | GABBR2 | psi-mi:“MI:0915”(physical association) | 0.510 |
| GABBR2 | RIMS1 | psi-mi:“MI:0915”(physical association) | 0.500 |
| Dlg4 | GABBR2 | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| GABBR2 | RNF170 | psi-mi:“MI:0915”(physical association) | 0.400 |
| GABBR2 | DRD2 | psi-mi:“MI:0915”(physical association) | 0.370 |
| RIMS1 | KIF2A | psi-mi:“MI:0914”(association) | 0.350 |
| RADX | DNAJA2 | psi-mi:“MI:0914”(association) | 0.350 |
| Cacna1d | GABBR2 | psi-mi:“MI:0403”(colocalization) | 0.270 |
| CERS2 | GABBR2 | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (34): GABBR2 (Affinity Capture-Western), AKT1 (Affinity Capture-Western), GABBR2 (Affinity Capture-Western), GABBR2 (Two-hybrid), DDIT3 (Affinity Capture-Western), DDIT3 (Co-localization), SH3GL3 (Two-hybrid), GABBR2 (Co-crystal Structure), GABBR2 (Reconstituted Complex), GABBR2 (Affinity Capture-Western), GABBR2 (Affinity Capture-Western), CASR (Affinity Capture-Western), GABBR2 (Two-hybrid), GABBR2 (Two-hybrid), GABBR2 (Affinity Capture-Western)
ESM2 similar proteins: A0A0G2K1Q8, B2RX12, E9PU17, E9PX95, F1MWM0, O00329, O15438, O35600, O75899, O88563, O88871, O94911, O95477, P41233, P55205, P58428, P78363, Q09427, Q09428, Q09429, Q2NKY8, Q5BJS0, Q5R607, Q5ZI74, Q6TL19, Q7L2E3, Q7TNJ2, Q80T41, Q84M24, Q8CF82, Q8IUA7, Q8K440, Q8K441, Q8K442, Q8K448, Q8K449, Q8LPK0, Q8N139, Q8NCL4, Q8R420
Diamond homologs: G5ECB2, O75899, O88871, Q6PCP7, Q80T41, Q8K451, Q8NFN8, Q9UBS5, Q9WV18, Q9Z0U4, E9Q6I0, O62714, O70410, P35384, P41180, P48442, Q5T6X5, Q6TAC4, Q70VB1, Q8K4Z6, Q9QY96, P23385, P31421, P31422, P31424, P41594, P91685, P97772, Q09630, Q13255, Q14416, Q14832, Q14BI2, Q1ZZH1, Q3UVX5, Q54SW3, Q55AP3, Q5RAL3, Q5U9X3, Q9QYS2
SIGNOR signaling
2 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| GABBR2 | “form complex” | “GABA-B receptor” | binding |
| PRKACA | “down-regulates activity” | GABBR2 | phosphorylation |
Disease & clinical
Clinical variants and AI predictions
ClinVar
1152 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 4 |
| Likely pathogenic | 8 |
| Uncertain significance | 421 |
| Likely benign | 511 |
| Benign | 141 |
Top pathogenic / likely-pathogenic (12)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1073462 | NM_005458.8(GABBR2):c.1700C>T (p.Ala567Val) | Pathogenic |
| 496588 | NM_005458.8(GABBR2):c.2077G>T (p.Gly693Trp) | Pathogenic |
| 496589 | NM_005458.8(GABBR2):c.2084G>T (p.Ser695Ile) | Pathogenic |
| 496590 | NM_005458.8(GABBR2):c.2114T>A (p.Ile705Asn) | Pathogenic |
| 1709440 | NM_005458.8(GABBR2):c.493G>T (p.Asp165Tyr) | Likely pathogenic |
| 1718680 | NM_005458.8(GABBR2):c.1001C>T (p.Thr334Ile) | Likely pathogenic |
| 2430201 | NM_005458.8(GABBR2):c.2072A>G (p.Tyr691Cys) | Likely pathogenic |
| 2444365 | NM_005458.8(GABBR2):c.72_73insACCATGGTTCAGCCACATCTGTCACTTGCCAGTATTGGTACGCATTAAAGTAACTGGTCTGAAACGTTCTATCCAAGAACGCTTGAACTTCCAAGTTACTAATGAAGTAATTCAAC (p.Leu25delinsThrMetValGlnProHisLeuSerLeuAlaSerIleGlyThrHisTer) | Likely pathogenic |
| 3376344 | NM_005458.8(GABBR2):c.2029G>A (p.Glu677Lys) | Likely pathogenic |
| 4072293 | NM_005458.8(GABBR2):c.1723A>T (p.Thr575Ser) | Likely pathogenic |
| 981375 | NM_005458.8(GABBR2):c.2106G>A (p.Met702Ile) | Likely pathogenic |
| 985861 | NM_005458.8(GABBR2):c.635G>A (p.Arg212Gln) | Likely pathogenic |
SpliceAI
4945 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 9:98293783:A:AC | donor_gain | 1.0000 |
| 9:98293784:C:CG | donor_gain | 1.0000 |
| 9:98293784:CT:C | donor_gain | 1.0000 |
| 9:98293784:CTGTT:C | donor_gain | 1.0000 |
| 9:98293907:A:AC | acceptor_gain | 1.0000 |
| 9:98293907:A:C | acceptor_gain | 1.0000 |
| 9:98299220:TTA:T | donor_loss | 1.0000 |
| 9:98299349:TCCAG:T | acceptor_gain | 1.0000 |
| 9:98299350:CCAG:C | acceptor_gain | 1.0000 |
| 9:98299350:CCAGC:C | acceptor_gain | 1.0000 |
| 9:98299351:CAGC:C | acceptor_gain | 1.0000 |
| 9:98299354:C:CC | acceptor_gain | 1.0000 |
| 9:98299354:CTAC:C | acceptor_loss | 1.0000 |
| 9:98303419:ATGAG:A | acceptor_gain | 1.0000 |
| 9:98303420:TGAG:T | acceptor_gain | 1.0000 |
| 9:98303422:AG:A | acceptor_gain | 1.0000 |
| 9:98303423:GCTGA:G | acceptor_loss | 1.0000 |
| 9:98303424:C:CC | acceptor_gain | 1.0000 |
| 9:98311089:ACCT:A | donor_loss | 1.0000 |
| 9:98311090:CCTA:C | donor_loss | 1.0000 |
| 9:98311091:CTACC:C | donor_loss | 1.0000 |
| 9:98311093:A:AC | donor_gain | 1.0000 |
| 9:98311093:A:C | donor_loss | 1.0000 |
| 9:98311094:C:CC | donor_gain | 1.0000 |
| 9:98311094:C:CT | donor_loss | 1.0000 |
| 9:98311201:TCCGG:T | acceptor_gain | 1.0000 |
| 9:98311202:CCGG:C | acceptor_gain | 1.0000 |
| 9:98311202:CCGGC:C | acceptor_gain | 1.0000 |
| 9:98311203:CGG:C | acceptor_gain | 1.0000 |
| 9:98311203:CGGC:C | acceptor_gain | 1.0000 |
AlphaMissense
6197 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 9:98306130:G:C | F740L | 1.000 |
| 9:98306130:G:T | F740L | 1.000 |
| 9:98306132:A:G | F740L | 1.000 |
| 9:98306137:A:G | L738P | 1.000 |
| 9:98306143:A:G | L736P | 1.000 |
| 9:98306233:C:T | G706E | 1.000 |
| 9:98306234:C:G | G706R | 1.000 |
| 9:98306234:C:T | G706R | 1.000 |
| 9:98306243:A:G | C703R | 1.000 |
| 9:98306252:C:G | G700R | 1.000 |
| 9:98306252:C:T | G700R | 1.000 |
| 9:98306256:G:C | N698K | 1.000 |
| 9:98306256:G:T | N698K | 1.000 |
| 9:98306261:A:G | Y697H | 1.000 |
| 9:98306263:A:T | V696D | 1.000 |
| 9:98306265:A:C | S695R | 1.000 |
| 9:98306265:A:T | S695R | 1.000 |
| 9:98306267:T:G | S695R | 1.000 |
| 9:98306272:C:T | G693E | 1.000 |
| 9:98306273:C:A | G693W | 1.000 |
| 9:98306283:G:C | S689R | 1.000 |
| 9:98306283:G:T | S689R | 1.000 |
| 9:98306284:C:A | S689I | 1.000 |
| 9:98306285:T:G | S689R | 1.000 |
| 9:98306287:T:A | D688V | 1.000 |
| 9:98306287:T:C | D688G | 1.000 |
| 9:98306287:T:G | D688A | 1.000 |
| 9:98306288:C:A | D688Y | 1.000 |
| 9:98306288:C:G | D688H | 1.000 |
| 9:98306288:C:T | D688N | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000004572 (9:98298272 C>A), RS1000014648 (9:98369411 G>A), RS1000015451 (9:98477522 G>A), RS1000027981 (9:98433820 G>A), RS1000030191 (9:98642673 T>G), RS1000032127 (9:98610707 T>C), RS1000035142 (9:98323244 A>C), RS1000036274 (9:98516733 C>G,T), RS1000061961 (9:98332035 C>G,T), RS1000062586 (9:98695485 C>A), RS1000063471 (9:98555282 A>G), RS1000064352 (9:98576015 G>A), RS1000070276 (9:98412900 G>A), RS1000086937 (9:98694111 C>A), RS1000105625 (9:98617412 G>A)
Disease associations
OMIM: gene MIM:607340 | disease phenotypes: MIM:617904, MIM:617903, MIM:188890, MIM:312750
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| developmental and epileptic encephalopathy, 59 | Strong | Autosomal dominant |
| neurodevelopmental disorder with poor language and loss of hand skills | Strong | Autosomal dominant |
| atypical Rett syndrome | Supportive | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| complex neurodevelopmental disorder | Moderate | AD |
Mondo (7): developmental and epileptic encephalopathy, 59 (MONDO:0033368), neurodevelopmental disorder with poor language and loss of hand skills (MONDO:0060659), tobacco addiction, susceptibility to (MONDO:0100460), intellectual disability (MONDO:0001071), autism spectrum disorder (MONDO:0005258), Rett syndrome (MONDO:0010726), atypical Rett syndrome (MONDO:0017746)
Orphanet (4): Atypical Rett syndrome (Orphanet:3095), Rett syndrome (Orphanet:778), NON RARE IN EUROPE: Unexplained intellectual disability (Orphanet:319658), NON RARE IN EUROPE: Autism (Orphanet:106)
HPO phenotypes
114 total (30 of 114 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000252 | Microcephaly |
| HP:0000256 | Macrocephaly |
| HP:0000348 | High forehead |
| HP:0000494 | Downslanted palpebral fissures |
| HP:0000504 | Abnormality of vision |
| HP:0000508 | Ptosis |
| HP:0000546 | Retinal degeneration |
| HP:0000639 | Nystagmus |
| HP:0000648 | Optic atrophy |
| HP:0000668 | Hypodontia |
| HP:0000708 | Atypical behavior |
| HP:0000713 | Agitation |
| HP:0000717 | Autism |
| HP:0000723 | Restrictive behavior |
| HP:0000729 | Autistic behavior |
| HP:0000748 | Inappropriate laughter |
| HP:0000750 | Delayed speech and language development |
| HP:0000817 | Reduced eye contact |
| HP:0001249 | Intellectual disability |
| HP:0001250 | Seizure |
| HP:0001251 | Ataxia |
| HP:0001252 | Hypotonia |
| HP:0001256 | Mild intellectual disability |
| HP:0001257 | Spasticity |
| HP:0001263 | Global developmental delay |
| HP:0001265 | Hyporeflexia |
| HP:0001268 | Mental deterioration |
| HP:0001273 | Abnormal corpus callosum morphology |
| HP:0001288 | Gait disturbance |
GWAS associations
12 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000483_7 | Folate pathway vitamin levels | 2.000000e-08 |
| GCST002037_6 | Post-traumatic stress disorder (asjusted for relatedness) | 2.000000e-06 |
| GCST002642_2 | Response to simvastatin treatment (PCSK9 protein level change) | 1.000000e-06 |
| GCST003825_9 | Systolic blood pressure change trajectory | 5.000000e-07 |
| GCST006168_7 | Pulse pressure x alcohol consumption interaction (2df test) | 1.000000e-09 |
| GCST006609_3 | Response to TNF inhibitor in rheumatoid arthritis (change in tender 28-joint count) | 7.000000e-08 |
| GCST007201_108 | Schizophrenia | 2.000000e-07 |
| GCST007201_347 | Schizophrenia | 3.000000e-06 |
| GCST008952_2 | High chromosomal aberration frequency (chromatid type) | 2.000000e-06 |
| GCST009823_14 | Gynecologic disease (multivariate analysis) | 5.000000e-08 |
| GCST012420_3 | tricyclic pyrone compound response (IC50) | 4.000000e-06 |
| GCST012466_3 | Autism spectrum disorder | 3.000000e-06 |
EFO canonical traits (9, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004578 | homocysteine measurement |
| EFO:0006899 | PCSK9 protein measurement |
| EFO:0006944 | systolic blood pressure change measurement |
| EFO:0004329 | alcohol drinking |
| EFO:0005763 | pulse pressure measurement |
| EFO:0004653 | response to TNF antagonist |
| EFO:0005413 | joint damage measurement |
| EFO:0009862 | chromatid-type aberration frequency |
| EFO:0600033 | response to mitochondrial complex I inhibitor |
MeSH disease descriptors (2)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D008607 | Intellectual Disability | C10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539 |
| D015518 | Rett Syndrome | C10.597.606.360.455.937; C16.320.322.500.937; C16.320.400.525.937 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL2111463 (PROTEIN COMPLEX), CHEMBL5034 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
4 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 186,196 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL701 | BACLOFEN | 4 | 25,446 |
| CHEMBL301742 | ARBACLOFEN | 3 | 253 |
| CHEMBL112797 | SGS-742 | 2 | 309 |
| CHEMBL96 | GAMMA-AMINOBUTYRIC ACID | 1 | 160,188 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
2 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs2304389 | GABBR2 | 0.00 | 0 | ||
| rs2779562 | GABBR2 | 0.00 | 0 |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: gpcr — GABAB receptors
Most potent curated ligand interactions (1 total), top 1:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| CGP7930 | Positive | 6.7 | pEC50 |
Binding affinities (BindingDB)
6 measured of 8 human assays (8 total across all organisms); most potent 6 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| 5-[1-(4-chlorophenyl)ethyl]-7-(1H-indol-6-yl)-3-methyl-[1,2]oxazolo[4,5-d]pyridazin-4-one | EC50 | 347 nM | US-10556914: Substituted isoxazolopyridazinones and isothiazolopyridazinones and methods of use |
| 5-[1-(4-chlorophenyl)ethyl]-3-methyl-7-(1H-pyrrolo[3,2-b]pyridin-6-yl)-[1,2]oxazolo[4,5-d]pyridazin-4-one | EC50 | 855 nM | US-10556914: Substituted isoxazolopyridazinones and isothiazolopyridazinones and methods of use |
| CHEMBL237582 | EC50 | 2750 nM | |
| CHEMBL401437 | EC50 | 3470 nM | |
| CHEMBL2322934 | EC50 | 37800 nM | |
| CHEMBL2322935 | EC50 | 40000 nM |
ChEMBL bioactivities
66 potent at pChembl≥5 of 81 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 9.70 | IC50 | 0.2 | nM | CHEMBL4763515 |
| 9.00 | Kd | 1 | nM | CHEMBL1628548 |
| 8.92 | IC50 | 1.2 | nM | CHEMBL4791366 |
| 8.62 | IC50 | 2.4 | nM | CHEMBL4756657 |
| 8.62 | IC50 | 2.4 | nM | CHEMBL112203 |
| 8.31 | IC50 | 4.9 | nM | CHEMBL4787614 |
| 8.18 | IC50 | 6.6 | nM | CHEMBL112710 |
| 8.07 | EC50 | 8.6 | nM | CHEMBL3600560 |
| 7.89 | IC50 | 13 | nM | CHEMBL4847170 |
| 7.82 | IC50 | 15 | nM | ARBACLOFEN |
| 7.75 | IC50 | 18 | nM | CHEMBL113453 |
| 7.73 | IC50 | 18.6 | nM | CHEMBL4745449 |
| 7.72 | IC50 | 18.9 | nM | CHEMBL4762233 |
| 7.68 | IC50 | 21 | nM | CHEMBL4856595 |
| 7.63 | IC50 | 23.2 | nM | CHEMBL4740566 |
| 7.60 | IC50 | 25 | nM | GAMMA-AMINOBUTYRIC ACID |
| 7.54 | IC50 | 29 | nM | CHEMBL113304 |
| 7.46 | IC50 | 35 | nM | BACLOFEN |
| 7.41 | IC50 | 39 | nM | CHEMBL430501 |
| 7.30 | IC50 | 50 | nM | BACLOFEN |
| 7.19 | EC50 | 64 | nM | CHEMBL5207265 |
| 7.05 | EC50 | 90 | nM | CHEMBL5170235 |
| 7.01 | EC50 | 97 | nM | CHEMBL5185974 |
| 6.85 | EC50 | 142 | nM | CHEMBL5204436 |
| 6.78 | IC50 | 166 | nM | CHEMBL113396 |
| 6.70 | IC50 | 200 | nM | CHEMBL312675 |
| 6.70 | EC50 | 199 | nM | CHEMBL5169533 |
| 6.70 | EC50 | 200 | nM | CHEMBL112710 |
| 6.68 | EC50 | 208 | nM | CHEMBL5183971 |
| 6.55 | IC50 | 280 | nM | CHEMBL113217 |
| 6.53 | EC50 | 294 | nM | CHEMBL5187574 |
| 6.47 | EC50 | 341 | nM | CHEMBL5193733 |
| 6.44 | IC50 | 360 | nM | CHEMBL111378 |
| 6.38 | EC50 | 419 | nM | CHEMBL5188066 |
| 6.35 | EC50 | 444 | nM | CHEMBL5202253 |
| 6.30 | EC50 | 496 | nM | CHEMBL5186902 |
| 6.30 | IC50 | 500 | nM | CHEMBL113907 |
| 6.28 | EC50 | 530 | nM | GAMMA-AMINOBUTYRIC ACID |
| 6.21 | IC50 | 610 | nM | 4-AMINO-3- (5-CHLOROTHIEN-2-YL)BUTANOIC ACID |
| 6.20 | EC50 | 637 | nM | CHEMBL5209256 |
| 6.13 | EC50 | 741.3 | nM | GS-39783 |
| 6.12 | EC50 | 764 | nM | CHEMBL2346820 |
| 6.11 | EC50 | 771 | nM | CHEMBL5209395 |
| 6.11 | IC50 | 780 | nM | CHEMBL111920 |
| 6.06 | IC50 | 880 | nM | CHEMBL109752 |
| 6.06 | EC50 | 871 | nM | CHEMBL393066 |
| 6.04 | IC50 | 920 | nM | CHEMBL111675 |
| 6.00 | EC50 | 1000 | nM | ARBACLOFEN |
| 5.92 | IC50 | 1200 | nM | CHEMBL312675 |
| 5.92 | EC50 | 1202 | nM | CHEMBL391647 |
PubChem BioAssay actives
63 with measured affinity, of 274 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (4S)-5-[[(2S,3S)-1-[[(2R)-1-amino-1-oxo-3-sulfanylpropan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2R)-2-[(2-benzamidoacetyl)amino]-3-sulfanylpropanoyl]amino]-3-sulfanylpropanoyl]amino]-3-hydroxypropanoyl]amino]-3-carboxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-carbamimidamidopentanoyl]amino]-3-sulfanylpropanoyl]amino]-5-carbamimidamidopentanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-3-carboxypropanoyl]amino]-3-(1H-imidazol-5-yl)propanoyl]pyrrolidine-2-carbonyl]amino]-5-oxopentanoic acid | 1687077: Activation of human GABAB1/GABAB2 expressed in HEK293 cells co-transfected with rat CaV2.2 channel assessed as reduction in CaV2.2-mediated peak-current amplitude in response to the depolarizing pulse by whole cell patch clamp assay | ic50 | 0.0002 | uM |
| 3-(1R)-1-[[(2S)-3-[5-[(4-azido-2-hydroxy-5-(125I)iodobenzoyl)amino]pentyl-hydroxyphosphoryl]-2-hydroxypropyl]amino]ethylbenzoic acid | 1237980: Binding affinity to GABA-B receptor (unknown origin) | kd | 0.0010 | uM |
| (4S)-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-4-amino-2-[[(2R)-2-[[(2S)-2-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2R)-2-[(2-benzamidoacetyl)amino]-3-sulfanylpropanoyl]amino]-3-sulfanylpropanoyl]amino]-3-hydroxypropanoyl]amino]-3-carboxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-carbamimidamidopentanoyl]amino]-3-sulfanylpropanoyl]amino]-4-oxobutanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-3-carboxypropanoyl]amino]-3-(1H-imidazol-5-yl)propanoyl]pyrrolidine-2-carbonyl]amino]-5-[[(2S,3S)-1-[[(2R)-1-amino-1-oxo-3-sulfanylpropan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-5-oxopentanoic acid | 1687077: Activation of human GABAB1/GABAB2 expressed in HEK293 cells co-transfected with rat CaV2.2 channel assessed as reduction in CaV2.2-mediated peak-current amplitude in response to the depolarizing pulse by whole cell patch clamp assay | ic50 | 0.0012 | uM |
| (4S)-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-4-amino-2-[[(2R)-2-[[(2S)-2-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2R)-2-[(2-aminoacetyl)amino]-3-sulfanylpropanoyl]amino]-3-sulfanylpropanoyl]amino]-3-hydroxypropanoyl]amino]-3-carboxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-carbamimidamidopentanoyl]amino]-3-sulfanylpropanoyl]amino]-4-oxobutanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-3-carboxypropanoyl]amino]-3-(1H-imidazol-5-yl)propanoyl]pyrrolidine-2-carbonyl]amino]-5-[[(2S,3S)-1-[[(2R)-1-amino-1-oxo-3-sulfanylpropan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-5-oxopentanoic acid | 1687077: Activation of human GABAB1/GABAB2 expressed in HEK293 cells co-transfected with rat CaV2.2 channel assessed as reduction in CaV2.2-mediated peak-current amplitude in response to the depolarizing pulse by whole cell patch clamp assay | ic50 | 0.0024 | uM |
| 3-aminopropyl-hydroxy-oxophosphanium | 71258: Inhibition of [3H]-baclofen binding to Gamma-aminobutyric acid type B receptor of cat cerebellum | ic50 | 0.0024 | uM |
| (4S)-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2R)-2-[(2-aminoacetyl)amino]-3-sulfanylpropanoyl]amino]-3-sulfanylpropanoyl]amino]-3-hydroxypropanoyl]amino]-3-carboxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-carbamimidamidopentanoyl]amino]-3-sulfanylpropanoyl]amino]-5-carbamimidamidopentanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-3-carboxypropanoyl]amino]-3-(1H-imidazol-5-yl)propanoyl]pyrrolidine-2-carbonyl]amino]-5-[[(2S,3S)-1-[[(2R)-1-amino-1-oxo-3-sulfanylpropan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-5-oxopentanoic acid | 1687077: Activation of human GABAB1/GABAB2 expressed in HEK293 cells co-transfected with rat CaV2.2 channel assessed as reduction in CaV2.2-mediated peak-current amplitude in response to the depolarizing pulse by whole cell patch clamp assay | ic50 | 0.0049 | uM |
| 3-aminopropyl(methyl)phosphinic acid | 71258: Inhibition of [3H]-baclofen binding to Gamma-aminobutyric acid type B receptor of cat cerebellum | ic50 | 0.0066 | uM |
| [(2R)-3-amino-2-fluoropropyl]phosphonic acid | 1237985: Agonist activity at human recombinant GABA-B receptor | ec50 | 0.0086 | uM |
| 3-[(1S,6R,9S,12S,15S,21S,24S,27S,30S,33S,36S,39S,45S,48S,53R)-53-[(2-aminoacetyl)amino]-30-(2-amino-2-oxoethyl)-9-[(2S)-butan-2-yl]-36-(3-carbamimidamidopropyl)-6-carbamoyl-24,45-bis(carboxymethyl)-48-(hydroxymethyl)-27-[(4-hydroxyphenyl)methyl]-21-(1H-imidazol-5-ylmethyl)-8,11,14,20,23,26,29,32,35,38,44,47,50,52-tetradecaoxo-3,4-dithia-7,10,13,19,22,25,28,31,34,37,43,46,49,51-tetradecazatetracyclo[31.17.7.015,19.039,43]heptapentacont-55-yn-12-yl]propanoic acid | 1762195: Agonist activity at human GABAB expressed in HEK293T cells co-transfected with human CaV2.2 channel assessed as inhibition of CaV2.2-mediated Ba2+ peak-current amplitude at -80 to 10 mV holding potential after 72 hrs by whole cell patch clamp assay | ic50 | 0.0130 | uM |
| (3R)-4-amino-3-(4-chlorophenyl)butanoic acid | 71258: Inhibition of [3H]-baclofen binding to Gamma-aminobutyric acid type B receptor of cat cerebellum | ic50 | 0.0150 | uM |
| (3-amino-2-hydroxypropyl)-hydroxy-oxophosphanium | 71258: Inhibition of [3H]-baclofen binding to Gamma-aminobutyric acid type B receptor of cat cerebellum | ic50 | 0.0180 | uM |
| (4S)-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2R)-2-[(2-aminoacetyl)amino]-3-sulfanylpropanoyl]amino]-3-sulfanylpropanoyl]amino]-3-hydroxypropanoyl]amino]-3-carboxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-carbamimidamidopentanoyl]amino]-3-sulfanylpropanoyl]amino]-5-carbamimidamidopentanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-3-hydroxypropanoyl]amino]-3-(1H-imidazol-5-yl)propanoyl]pyrrolidine-2-carbonyl]amino]-5-[[(2S,3S)-1-[[(2R)-1-amino-1-oxo-3-sulfanylpropan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-5-oxopentanoic acid | 1687077: Activation of human GABAB1/GABAB2 expressed in HEK293 cells co-transfected with rat CaV2.2 channel assessed as reduction in CaV2.2-mediated peak-current amplitude in response to the depolarizing pulse by whole cell patch clamp assay | ic50 | 0.0186 | uM |
| (4S)-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2R)-2-[(2-acetamidoacetyl)amino]-3-sulfanylpropanoyl]amino]-3-sulfanylpropanoyl]amino]-3-hydroxypropanoyl]amino]-3-carboxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-carbamimidamidopentanoyl]amino]-3-sulfanylpropanoyl]amino]-5-carbamimidamidopentanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-3-carboxypropanoyl]amino]-3-(1H-imidazol-5-yl)propanoyl]pyrrolidine-2-carbonyl]amino]-5-[[(2S,3S)-1-[[(2R)-1-amino-1-oxo-3-sulfanylpropan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-5-oxopentanoic acid | 1687077: Activation of human GABAB1/GABAB2 expressed in HEK293 cells co-transfected with rat CaV2.2 channel assessed as reduction in CaV2.2-mediated peak-current amplitude in response to the depolarizing pulse by whole cell patch clamp assay | ic50 | 0.0189 | uM |
| 3-[(1R,4S,7S,10S,13S,19S,22S,25S,28R,33R,36R,39S,42S,48S,51S)-33-[(2-aminoacetyl)amino]-4-(2-amino-2-oxoethyl)-25-[(2S)-butan-2-yl]-51-(3-carbamimidamidopropyl)-28-carbamoyl-10,42-bis(carboxymethyl)-39-(hydroxymethyl)-7-[(4-hydroxyphenyl)methyl]-13-(1H-imidazol-5-ylmethyl)-2,5,8,11,14,20,23,26,34,37,40,43,49,52-tetradecaoxo-30,31,55,56-tetrathia-3,6,9,12,15,21,24,27,35,38,41,44,50,53-tetradecazatetracyclo[34.17.4.015,19.044,48]heptapentacontan-22-yl]propanoic acid | 1762195: Agonist activity at human GABAB expressed in HEK293T cells co-transfected with human CaV2.2 channel assessed as inhibition of CaV2.2-mediated Ba2+ peak-current amplitude at -80 to 10 mV holding potential after 72 hrs by whole cell patch clamp assay | ic50 | 0.0210 | uM |
| (4S)-5-[[(2S,3S)-1-[[(2R)-1-amino-1-oxo-3-sulfanylpropan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2R)-2-amino-3-sulfanylpropanoyl]amino]-3-sulfanylpropanoyl]amino]-3-hydroxypropanoyl]amino]-3-carboxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-carbamimidamidopentanoyl]amino]-3-sulfanylpropanoyl]amino]-5-carbamimidamidopentanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-3-carboxypropanoyl]amino]-3-(1H-imidazol-5-yl)propanoyl]pyrrolidine-2-carbonyl]amino]-5-oxopentanoic acid | 1687077: Activation of human GABAB1/GABAB2 expressed in HEK293 cells co-transfected with rat CaV2.2 channel assessed as reduction in CaV2.2-mediated peak-current amplitude in response to the depolarizing pulse by whole cell patch clamp assay | ic50 | 0.0232 | uM |
| .gamma.-aminobutyric acid | 71258: Inhibition of [3H]-baclofen binding to Gamma-aminobutyric acid type B receptor of cat cerebellum | ic50 | 0.0250 | uM |
| (3-amino-2-hydroxypropyl)-methylphosphinic acid | 71256: Inhibition of [3H]CGP-27492 binding to cat Gamma-aminobutyric acid type B receptor | ic50 | 0.0290 | uM |
| Baclofen | 71258: Inhibition of [3H]-baclofen binding to Gamma-aminobutyric acid type B receptor of cat cerebellum | ic50 | 0.0350 | uM |
| [3-amino-2-(4-chlorophenyl)propyl]-hydroxy-oxophosphanium | 71257: Inhibition of [3H]baclofen binding to Gamma-aminobutyric acid type B receptor of cat cerebellum | ic50 | 0.0390 | uM |
| N-[(1R,2R,4S)-2-bicyclo[2.2.1]heptanyl]-2-chloro-6-(3,5-dichlorophenyl)quinazolin-4-amine | 1867062: Positive allosteric modulation of GABA-B receptor (unknown origin) assessed as stimulation of [35S]GTPgammaS binding by [35S]GTPgammaS binding assay | ec50 | 0.0640 | uM |
| N-[(1R,2R,4S)-2-bicyclo[2.2.1]heptanyl]-2-chloro-6-[3-(trifluoromethyl)phenyl]quinazolin-4-amine | 1867062: Positive allosteric modulation of GABA-B receptor (unknown origin) assessed as stimulation of [35S]GTPgammaS binding by [35S]GTPgammaS binding assay | ec50 | 0.0900 | uM |
| N-[(1R,2R,4S)-2-bicyclo[2.2.1]heptanyl]-6-(3,5-dichlorophenyl)-2-methylquinazolin-4-amine | 1867062: Positive allosteric modulation of GABA-B receptor (unknown origin) assessed as stimulation of [35S]GTPgammaS binding by [35S]GTPgammaS binding assay | ec50 | 0.0970 | uM |
| N-[(1R,2R,4S)-2-bicyclo[2.2.1]heptanyl]-2-methyl-6-[3-(trifluoromethyl)phenyl]quinazolin-4-amine | 1867062: Positive allosteric modulation of GABA-B receptor (unknown origin) assessed as stimulation of [35S]GTPgammaS binding by [35S]GTPgammaS binding assay | ec50 | 0.1420 | uM |
| 4-aminobutan-2-yl(methyl)phosphinic acid | 71256: Inhibition of [3H]CGP-27492 binding to cat Gamma-aminobutyric acid type B receptor | ic50 | 0.1660 | uM |
| N-[(1R,2R,4S)-2-bicyclo[2.2.1]heptanyl]-6-(3-chlorophenyl)-2-methylquinazolin-4-amine | 1867062: Positive allosteric modulation of GABA-B receptor (unknown origin) assessed as stimulation of [35S]GTPgammaS binding by [35S]GTPgammaS binding assay | ec50 | 0.1990 | uM |
| N-[(1R,2R,4S)-2-bicyclo[2.2.1]heptanyl]-2-chloro-6-(4-chlorophenyl)quinazolin-4-amine | 1867062: Positive allosteric modulation of GABA-B receptor (unknown origin) assessed as stimulation of [35S]GTPgammaS binding by [35S]GTPgammaS binding assay | ec50 | 0.2080 | uM |
| [(E)-3-aminoprop-1-enyl]-hydroxy-oxophosphanium | 71258: Inhibition of [3H]-baclofen binding to Gamma-aminobutyric acid type B receptor of cat cerebellum | ic50 | 0.2800 | uM |
| N-[(1R,2R,4S)-2-bicyclo[2.2.1]heptanyl]-2-chloro-6-(4-fluorophenyl)quinazolin-4-amine | 1867062: Positive allosteric modulation of GABA-B receptor (unknown origin) assessed as stimulation of [35S]GTPgammaS binding by [35S]GTPgammaS binding assay | ec50 | 0.2940 | uM |
| N-[(1R,2R,4S)-2-bicyclo[2.2.1]heptanyl]-2-chloro-6-(3,4-dichlorophenyl)quinazolin-4-amine | 1867062: Positive allosteric modulation of GABA-B receptor (unknown origin) assessed as stimulation of [35S]GTPgammaS binding by [35S]GTPgammaS binding assay | ec50 | 0.3410 | uM |
| [3-amino-2-(4-fluorophenyl)propyl]-hydroxy-oxophosphanium | 71257: Inhibition of [3H]baclofen binding to Gamma-aminobutyric acid type B receptor of cat cerebellum | ic50 | 0.3600 | uM |
| N-[(1R,2R,4S)-2-bicyclo[2.2.1]heptanyl]-6-(3,4-dichlorophenyl)-2-methylquinazolin-4-amine | 1867062: Positive allosteric modulation of GABA-B receptor (unknown origin) assessed as stimulation of [35S]GTPgammaS binding by [35S]GTPgammaS binding assay | ec50 | 0.4190 | uM |
| N-[(1R,2R,4S)-2-bicyclo[2.2.1]heptanyl]-6-(4-chlorophenyl)-2-methylquinazolin-4-amine | 1867062: Positive allosteric modulation of GABA-B receptor (unknown origin) assessed as stimulation of [35S]GTPgammaS binding by [35S]GTPgammaS binding assay | ec50 | 0.4440 | uM |
| N-[(1R,2R,4S)-2-bicyclo[2.2.1]heptanyl]-6-(2-chlorophenyl)-2-methylquinazolin-4-amine | 1867062: Positive allosteric modulation of GABA-B receptor (unknown origin) assessed as stimulation of [35S]GTPgammaS binding by [35S]GTPgammaS binding assay | ec50 | 0.4960 | uM |
| 3-aminobutyl-hydroxy-oxophosphanium | 71258: Inhibition of [3H]-baclofen binding to Gamma-aminobutyric acid type B receptor of cat cerebellum | ic50 | 0.5000 | uM |
| 4-amino-3-(5-chlorothiophen-2-yl)butanoic acid | 1237980: Binding affinity to GABA-B receptor (unknown origin) | ic50 | 0.6100 | uM |
| N-[(1R,2R,4S)-2-bicyclo[2.2.1]heptanyl]-2-chloro-6-[4-(trifluoromethyl)phenyl]quinazolin-4-amine | 1867062: Positive allosteric modulation of GABA-B receptor (unknown origin) assessed as stimulation of [35S]GTPgammaS binding by [35S]GTPgammaS binding assay | ec50 | 0.6370 | uM |
| 4-N,6-N-dicyclopentyl-2-methylsulfanyl-5-nitropyrimidine-4,6-diamine | 301941: Activity at GABAB 1b/2 receptor expressed in CHO-K1 cells assessed as effect on glutamate-induced [35S]GTP-gamma-S binding | ec50 | 0.7413 | uM |
| N-[(1R,2R,4S)-2-bicyclo[2.2.1]heptanyl]-2-methyl-5-[4-(trifluoromethyl)phenyl]pyrimidin-4-amine | 1867062: Positive allosteric modulation of GABA-B receptor (unknown origin) assessed as stimulation of [35S]GTPgammaS binding by [35S]GTPgammaS binding assay | ec50 | 0.7640 | uM |
| N-[(1R,2R,4S)-2-bicyclo[2.2.1]heptanyl]-2-methyl-6-[4-(trifluoromethyl)phenyl]quinazolin-4-amine | 1867062: Positive allosteric modulation of GABA-B receptor (unknown origin) assessed as stimulation of [35S]GTPgammaS binding by [35S]GTPgammaS binding assay | ec50 | 0.7710 | uM |
| (3-amino-2-methylpropyl)-hydroxy-oxophosphanium | 71258: Inhibition of [3H]-baclofen binding to Gamma-aminobutyric acid type B receptor of cat cerebellum | ic50 | 0.7800 | uM |
| N-cyclohexyl-2-methyl-5-[4-(trifluoromethyl)phenyl]pyrimidin-4-amine | 301941: Activity at GABAB 1b/2 receptor expressed in CHO-K1 cells assessed as effect on glutamate-induced [35S]GTP-gamma-S binding | ec50 | 0.8710 | uM |
| (3-amino-2-phenylpropyl)-hydroxy-oxophosphanium | 71257: Inhibition of [3H]baclofen binding to Gamma-aminobutyric acid type B receptor of cat cerebellum | ic50 | 0.8800 | uM |
| 4-aminobutan-2-yl-hydroxy-oxophosphanium | 71258: Inhibition of [3H]-baclofen binding to Gamma-aminobutyric acid type B receptor of cat cerebellum | ic50 | 0.9200 | uM |
| 4-[[(1S,2R,4R)-2-bicyclo[2.2.1]heptanyl]amino]-5-[4-(trifluoromethyl)phenyl]pyrimidine-2-carbonitrile | 301941: Activity at GABAB 1b/2 receptor expressed in CHO-K1 cells assessed as effect on glutamate-induced [35S]GTP-gamma-S binding | ec50 | 1.2023 | uM |
| 3-aminopropyl(ethyl)phosphinic acid | 71258: Inhibition of [3H]-baclofen binding to Gamma-aminobutyric acid type B receptor of cat cerebellum | ic50 | 1.3500 | uM |
| N-[(1S,2R,4R)-2-bicyclo[2.2.1]heptanyl]-2-methyl-5-[4-(trifluoromethyl)phenyl]pyrimidin-4-amine | 301941: Activity at GABAB 1b/2 receptor expressed in CHO-K1 cells assessed as effect on glutamate-induced [35S]GTP-gamma-S binding | ec50 | 1.6596 | uM |
| N-cycloheptyl-2-methyl-5-[4-(trifluoromethyl)phenyl]pyrimidin-4-amine | 301941: Activity at GABAB 1b/2 receptor expressed in CHO-K1 cells assessed as effect on glutamate-induced [35S]GTP-gamma-S binding | ec50 | 1.6596 | uM |
| 4-N-[(1S,2R,4R)-2-bicyclo[2.2.1]heptanyl]-2-N,2-N-dimethyl-5-[4-(trifluoromethyl)phenyl]pyrimidine-2,4-diamine | 301941: Activity at GABAB 1b/2 receptor expressed in CHO-K1 cells assessed as effect on glutamate-induced [35S]GTP-gamma-S binding | ec50 | 1.6596 | uM |
| (3S)-4-amino-3-(4-chlorophenyl)butanoic acid | 71258: Inhibition of [3H]-baclofen binding to Gamma-aminobutyric acid type B receptor of cat cerebellum | ic50 | 1.7700 | uM |
| 5,7-ditert-butyl-3-hydroxy-3-(trifluoromethyl)-1-benzofuran-2-one | 729173: Agonist activity at human GABA-B B1/B2 receptor expressed in HEK293 cells assessed as inhibition of forskolin-stimulated cAMP accumulation after 3 hrs by luciferase reporter gene assay | ec50 | 1.9000 | uM |
CTD chemical–gene interactions
60 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | increases expression, affects expression, affects cotreatment | 6 |
| bisphenol A | decreases methylation, decreases expression | 5 |
| Estradiol | affects expression, affects cotreatment, increases expression, increases reaction | 5 |
| sodium arsenite | affects methylation, increases expression | 3 |
| gamma-Aminobutyric Acid | affects cotreatment, affects reaction, increases activity, affects binding, increases reaction (+1 more) | 3 |
| entinostat | increases expression, affects cotreatment | 2 |
| Formaldehyde | increases expression, decreases expression | 2 |
| Tetrachlorodibenzodioxin | affects cotreatment, increases expression | 2 |
| Tretinoin | increases expression | 2 |
| propionaldehyde | increases expression | 1 |
| quercitrin | increases expression | 1 |
| 1-(3-chlorophenyl)piperazine | affects cotreatment, affects reaction, increases activity | 1 |
| cobaltous chloride | decreases expression | 1 |
| butyraldehyde | increases expression | 1 |
| manganese chloride | increases abundance, increases expression | 1 |
| benzo(e)pyrene | increases methylation | 1 |
| aflatoxin B2 | increases methylation | 1 |
| S-(1,2-dichlorovinyl)cysteine | affects cotreatment, decreases expression | 1 |
| pentanal | increases expression | 1 |
| 3-aminopropylphosphinic acid | increases activity, increases reaction, affects binding | 1 |
| CGP 55845A | affects binding, decreases reaction, increases activity, increases reaction, decreases activity | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| CGP 71872 | affects binding, decreases reaction, increases activity | 1 |
| methylone | affects cotreatment, decreases reaction, increases activity | 1 |
| 2,6-di-tert-butyl-4-(3-hydroxy-2,2-dimethylpropyl)phenol | affects binding, increases activity, increases reaction, decreases reaction | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | increases expression, affects cotreatment | 1 |
| bisphenol B | decreases expression | 1 |
| 2-methyl-2H-pyrazole-3-carboxylic acid (2-methyl-4-o-tolylazophenyl)amide | decreases expression, decreases reaction | 1 |
| dorsomorphin | affects cotreatment, increases expression | 1 |
| bisphenol Z | decreases expression | 1 |
ChEMBL screening assays
57 unique, capped per target: 35 binding, 21 functional, 1 admet
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1679957 | Functional | Antagonist activity at human recombinant GABAb 1b/2 receptor expressed in Xenopus laevis oocytes co-expressing GIRK1/4 assessed as inhibition of GABA-induced current by two electrode voltage clamp technique | Novel Cyclic Phosphinic Acids as GABAC ρ Receptor Antagonists: Design, Synthesis, and Pharmacology. — ACS Med Chem Lett |
| CHEMBL2401236 | Binding | Antagonist activity at human recombinant GABAB1b2 receptor expressed in Xenopus laevis assessed as inhibition of GABA-induced chloride current production at 300 uM after 2 to 5 days by two-electrode voltage-clamp electrophysiological assay | Γ-aminobutyric acid(C) (GABAC) selective antagonists derived from the bioisosteric modification of 4-aminocyclopent-1-enecarboxylic acid: amides and hydroxamates. — J Med Chem |
| CHEMBL4810231 | ADMET | Inhibition of GABA-B receptor (unknown origin) at 0.1 to 1 uM | Discovery of Pemigatinib: A Potent and Selective Fibroblast Growth Factor Receptor (FGFR) Inhibitor. — J Med Chem |
Cellosaurus cell lines
1 cell lines: 1 spontaneously immortalized cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_LC01 | CHO-K1 h-GABA-b R1a/R2 | Spontaneously immortalized cell line | Female |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT05657860 | PHASE4 | COMPLETED | Guanfacine Extended Release for the Reduction of Aggression and Self-injurious Behavior Associated With Prader-Willi Syndrome |
| NCT05744479 | PHASE4 | RECRUITING | Metformin for Antipsychotic-induced Weight Gain in Adults With Intellectual Disability |
| NCT06107829 | PHASE4 | WITHDRAWN | Valbenazine Treatment of Tardive Dyskinesia in Adults With Intellectual/Developmental Disabilities |
| NCT06997198 | PHASE4 | NOT_YET_RECRUITING | Deutetrabenazine Treatment for Tardive Dyskinesia in Intellectual/Developmental Disabilities |
| NCT00391261 | PHASE4 | COMPLETED | An Open-label Trial of Metformin for Weight Control of Pediatric Patients on Antipsychotic Medications. |
| NCT01028820 | PHASE4 | COMPLETED | FMRI Brain Activation of Aripiprazole Treatment in Autism Spectrum Disorders |
| NCT01333865 | PHASE4 | COMPLETED | A Study of Memantine Hydrochloride (Namenda®) for Cognitive and Behavioral Impairment in Adults With Autism Spectrum Disorders |
| NCT01337700 | PHASE4 | COMPLETED | Milnacipran in Autism and the Functional Locus Coeruleus and Noradrenergic Model of Autism |
| NCT01695200 | PHASE4 | COMPLETED | Omega-3 Fatty Acids in Autism Spectrum Disorders |
| NCT02096952 | PHASE4 | COMPLETED | Methylphenidate ER Liquid Formulation in Adults With ASD and ADHD |
| NCT02235467 | PHASE4 | COMPLETED | Multisite Study: Parental Training Using Video Modelling to Develop Social Skills in Children With Autism |
| NCT02940574 | PHASE4 | COMPLETED | Neural and Behavioral Effects of Oxytocin in Autism Spectrum Disorders |
| NCT03333629 | PHASE4 | COMPLETED | Promoting Positive Outcomes for Individuals With ASD: Linking Early Detection, Treatment, and Long-term Outcomes |
| NCT03337646 | PHASE4 | COMPLETED | Evaluation of the Effect and Safety of Lisdexamfetamine in Children Aged 6-12 With ADHD and Autism |
| NCT03538431 | PHASE4 | COMPLETED | Improving Driving in Young People With Autism Spectrum Disorders |
| NCT03757585 | PHASE4 | COMPLETED | Natural Treatments for the Management of Emotional Dysregulation in Youth With Non-verbal Learning Disability (NVLD) and/or Autism Spectrum Disorders (ASD) |
| NCT04903353 | PHASE4 | COMPLETED | Pragmatic Trial Comparing Weight Gain in Children With Autism Taking Risperidone Versus Aripiprazole |
| NCT05063656 | PHASE4 | COMPLETED | Biomarker-Driven Pharmacological Treatment of Adolescents With Autism Spectrum Disorder With Gabapentin |
| NCT05146245 | PHASE4 | UNKNOWN | Safety and Pharmacokinetics of Antipsychotics in Children 2: Studying TDM in an RCT |
| NCT05916339 | PHASE4 | RECRUITING | AWARE: Management of ADHD in Autism Spectrum Disorder |
| NCT05954052 | PHASE4 | TERMINATED | A Study of Glutathione in Children With Autism Spectrum Disorder |
| NCT06853665 | PHASE4 | RECRUITING | The TEAM Study - Treatment Efficacy for Autism/Attention Using Mixed Amphetamine |
| NCT07054697 | PHASE4 | COMPLETED | Pilot-RCT With Individualized Homeopathic Treatment in the Children With Autism Spectrum Disorder |
| NCT07161804 | PHASE4 | COMPLETED | Pilot RCT Using Homeopathic Medicines in ASD |
| NCT07439042 | PHASE4 | NOT_YET_RECRUITING | Buspirone for Anxiety in Autistic Youth |
| NCT02270736 | PHASE3 | COMPLETED | Clinical Study to Investigate the Efficacy and Safety of NT 201 Compared to Placebo in the Treatment of Chronic Troublesome Drooling Associated With Neurological Disorders and/or Intellectual Disability |
| NCT01302964 | PHASE3 | COMPLETED | Mirtazapine Treatment of Anxiety in Children and Adolescents With Pervasive Developmental Disorders |
| NCT01706523 | PHASE3 | TERMINATED | Open Label Extension Study of STX209 (Arbaclofen) in Autism Spectrum Disorders |
| NCT01825798 | PHASE3 | COMPLETED | Treatment of Overweight Induced by Antipsychotic Medication in Young People With Autism Spectrum Disorders (ASD) |
| NCT01972074 | PHASE3 | COMPLETED | Behavioral and Neural Response to Memantine in Adolescents With Autism Spectrum Disorder |
| NCT02985749 | PHASE3 | COMPLETED | A Study of Oxytocin for the Treatment of Social Impairment in Individuals With High Functioning Autism Spectrum Disorder |
| NCT03197922 | PHASE3 | COMPLETED | Treatment of Encopresis in Children With Autism Spectrum Disorders |
| NCT03504917 | PHASE3 | TERMINATED | A Study of Balovaptan in Adults With Autism Spectrum Disorder With a 2-Year Open-Label Extension |
| NCT03553875 | PHASE3 | TERMINATED | Memantine for the Treatment of Social Deficits in Youth With Disorders of Impaired Social Interactions |
| NCT03640156 | PHASE3 | COMPLETED | Modulating Socially Adaptive Mirror System Functioning in Autism by Oxytocin |
| NCT03715153 | PHASE3 | TERMINATED | Efficacy and Safety of Bumetanide Oral Liquid Formulation in Children Aged From 2 to Less Than 7 Years Old With Autism Spectrum Disorder. |
| NCT03715166 | PHASE3 | TERMINATED | Efficacy and Safety of Bumetanide Oral Liquid Formulation in Children and Adolescents Aged From 7 to Less Than 18 Years Old With Autism Spectrum Disorder |
| NCT04233502 | PHASE3 | WITHDRAWN | Efficacy and Safety of Slenyto for Insomnia in Children With ASD |
| NCT04578756 | PHASE3 | COMPLETED | Open-Label, Flexible-dose Study to Evaluate the Long-Term Safety and Tolerability of Cariprazine in the Treatment of Pediatric Participants With Schizophrenia, Bipolar I Disorder, or Autism Spectrum Disorder |
| NCT04623398 | PHASE3 | COMPLETED | Effect of Lithium in Patients With Autism Spectrum Disorder and Phelan-McDermid Syndrome (SHANK3 Haploinsufficiency) |
Related Atlas pages
- Associated diseases: developmental and epileptic encephalopathy, 59, neurodevelopmental disorder with poor language and loss of hand skills, atypical Rett syndrome, complex neurodevelopmental disorder
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): atypical Rett syndrome, developmental and epileptic encephalopathy, 59, female reproductive system disorder, neurodevelopmental disorder with poor language and loss of hand skills, post-traumatic stress disorder, Rett syndrome, tobacco addiction, susceptibility to