GABRA3-AS1

Summary

GABRA3-AS1 (GABRA3 antisense RNA 1, HGNC:58378) is a long non-coding RNA gene on chromosome Xq28.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58378
Approved symbol	GABRA3-AS1
Name	GABRA3 antisense RNA 1
Location	Xq28
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231937
Ensembl biotype	lncRNA
Entrez	141585753

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000453915, ENST00000778019

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000453915 — 4 exons

Exon	Start	End
ENSE00001610937	152140015	152140071
ENSE00001669776	152186808	152186857
ENSE00001707596	152164197	152164588
ENSE00001771030	152138883	152138934

Expression profiles

Bgee: expression breadth broad, 84 present calls, max score 85.19.

Top tissues by expression

84 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.19	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	68.79	gold quality
liver	UBERON:0002107	66.85	silver quality
ventricular zone	UBERON:0003053	66.70	gold quality
cortex of kidney	UBERON:0001225	64.12	gold quality
gall bladder	UBERON:0002110	58.91	gold quality
placenta	UBERON:0001987	56.54	gold quality
urinary bladder	UBERON:0001255	55.28	gold quality
ectocervix	UBERON:0012249	53.76	gold quality
stromal cell of endometrium	CL:0002255	53.70	silver quality
blood	UBERON:0000178	53.47	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	52.19	gold quality
leukocyte	CL:0000738	51.72	silver quality
islet of Langerhans	UBERON:0000006	49.48	gold quality
calcaneal tendon	UBERON:0003701	48.92	silver quality
lower esophagus mucosa	UBERON:0035834	48.30	gold quality
prefrontal cortex	UBERON:0000451	48.24	gold quality
monocyte	CL:0000576	47.80	silver quality
cerebellum	UBERON:0002037	46.61	silver quality
gastrocnemius	UBERON:0001388	46.06	silver quality
small intestine	UBERON:0002108	44.94	gold quality
tibial artery	UBERON:0007610	44.93	gold quality
body of pancreas	UBERON:0001150	44.17	silver quality
heart left ventricle	UBERON:0002084	44.13	silver quality
esophagus mucosa	UBERON:0002469	43.37	silver quality
zone of skin	UBERON:0000014	43.25	gold quality
skin of abdomen	UBERON:0001416	43.15	gold quality
fundus of stomach	UBERON:0001160	43.08	silver quality
Brodmann (1909) area 9	UBERON:0013540	42.99	gold quality
vagina	UBERON:0000996	42.94	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.80

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.