GAL3ST2-AS1

Summary

GAL3ST2-AS1 (GAL3ST2 antisense RNA 1, HGNC:41068) is a long non-coding RNA gene on chromosome 2q37.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41068
Approved symbol	GAL3ST2-AS1
Name	GAL3ST2 antisense RNA 1
Location	2q37.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000215023
Ensembl biotype	lncRNA
Entrez	139225792
RNAcentral	URS0000426398 — lncRNA, 739 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000437438

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000437438 — 2 exons

Exon	Start	End
ENSE00001559986	241800916	241801388
ENSE00001672089	241801642	241801907

Expression profiles

Bgee: expression breadth ubiquitous, 112 present calls, max score 81.24.

Top tissues by expression

112 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.24	silver quality
rectum	UBERON:0001052	72.03	gold quality
colonic epithelium	UBERON:0000397	71.77	gold quality
transverse colon	UBERON:0001157	67.70	gold quality
mucosa of transverse colon	UBERON:0004991	67.15	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	65.27	gold quality
colon	UBERON:0001155	63.42	gold quality
ganglionic eminence	UBERON:0004023	61.72	gold quality
intestine	UBERON:0000160	61.37	gold quality
vermiform appendix	UBERON:0001154	59.56	gold quality
endocervix	UBERON:0000458	59.05	gold quality
bone marrow	UBERON:0002371	58.61	gold quality
gall bladder	UBERON:0002110	55.49	gold quality
prefrontal cortex	UBERON:0000451	55.29	gold quality
liver	UBERON:0002107	54.62	gold quality
left adrenal gland	UBERON:0001234	52.81	gold quality
muscle layer of sigmoid colon	UBERON:0035805	52.68	gold quality
frontal cortex	UBERON:0001870	52.52	gold quality
right lobe of liver	UBERON:0001114	52.45	gold quality
adrenal gland	UBERON:0002369	52.08	gold quality
nucleus accumbens	UBERON:0001882	52.06	gold quality
islet of Langerhans	UBERON:0000006	51.94	gold quality
monocyte	CL:0000576	51.71	silver quality
calcaneal tendon	UBERON:0003701	51.54	silver quality
ectocervix	UBERON:0012249	51.54	gold quality
stromal cell of endometrium	CL:0002255	51.32	silver quality
kidney	UBERON:0002113	51.19	gold quality
right uterine tube	UBERON:0001302	51.18	gold quality
cortex of kidney	UBERON:0001225	50.67	gold quality
cerebral cortex	UBERON:0000956	50.56	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.09

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.