GALNT13-AS1

Summary

GALNT13-AS1 (GALNT13 antisense RNA 1, HGNC:56700) is a long non-coding RNA gene on chromosome 2q24.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56700
Approved symbol	GALNT13-AS1
Name	GALNT13 antisense RNA 1
Location	2q24.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC009227.1
Ensembl gene	ENSG00000224675
Ensembl biotype	lncRNA
Entrez	100144595
RNAcentral	URS00005FEBC9 — lncRNA, 2362 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000434635, ENST00000729371, ENST00000729372, ENST00000729373

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000434635 — 5 exons

Exon	Start	End
ENSE00001593803	154435853	154437850
ENSE00001691619	154445808	154445885
ENSE00001692364	154454538	154454642
ENSE00001703887	154456797	154456904
ENSE00001742529	154457366	154457438

Expression profiles

Bgee: expression breadth broad, 99 present calls, max score 64.19.

Top tissues by expression

99 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
calcaneal tendon	UBERON:0003701	64.19	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	61.29	silver quality
cortical plate	UBERON:0005343	61.14	gold quality
corpus callosum	UBERON:0002336	60.46	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.65	silver quality
ventricular zone	UBERON:0003053	58.77	silver quality
tonsil	UBERON:0002372	57.36	silver quality
pituitary gland	UBERON:0000007	56.48	gold quality
adenohypophysis	UBERON:0002196	56.22	gold quality
cerebellum	UBERON:0002037	55.09	gold quality
cerebellar cortex	UBERON:0002129	55.07	gold quality
right hemisphere of cerebellum	UBERON:0014890	54.99	gold quality
cerebellar hemisphere	UBERON:0002245	54.95	gold quality
blood	UBERON:0000178	48.96	silver quality
muscle of leg	UBERON:0001383	48.84	gold quality
heart left ventricle	UBERON:0002084	48.71	gold quality
primary visual cortex	UBERON:0002436	48.53	gold quality
islet of Langerhans	UBERON:0000006	48.05	gold quality
prefrontal cortex	UBERON:0000451	47.96	silver quality
vermiform appendix	UBERON:0001154	47.87	silver quality
gastrocnemius	UBERON:0001388	47.57	gold quality
right lobe of liver	UBERON:0001114	47.19	silver quality
heart	UBERON:0000948	46.78	gold quality
amygdala	UBERON:0001876	46.57	gold quality
brain	UBERON:0000955	46.47	gold quality
adrenal tissue	UBERON:0018303	46.28	silver quality
monocyte	CL:0000576	45.69	silver quality
popliteal artery	UBERON:0002250	45.50	gold quality
tibial artery	UBERON:0007610	45.46	gold quality
superior frontal gyrus	UBERON:0002661	45.40	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.77

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.