GALNT16-AS1

Summary

GALNT16-AS1 (GALNT16 and EXD2 antisense RNA 1, HGNC:55435) is a long non-coding RNA gene on chromosome 14q24.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55435
Approved symbol	GALNT16-AS1
Name	GALNT16 and EXD2 antisense RNA 1
Location	14q24.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258957
Ensembl biotype	lncRNA
Entrez	105370550
RNAcentral	URS00026A23B3 — lncRNA, 2128 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000554898, ENST00000556182, ENST00000557409, ENST00000653782

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000554898 — 3 exons

Exon	Start	End
ENSE00002525940	69213907	69214092
ENSE00002526043	69183020	69184497
ENSE00002535341	69196040	69196201

Expression profiles

Bgee: expression breadth ubiquitous, 124 present calls, max score 83.97.

Top tissues by expression

124 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.97	gold quality
testis	UBERON:0000473	71.05	gold quality
left testis	UBERON:0004533	70.55	gold quality
right testis	UBERON:0004534	70.22	gold quality
ventricular zone	UBERON:0003053	67.15	gold quality
ganglionic eminence	UBERON:0004023	63.01	gold quality
cortical plate	UBERON:0005343	61.76	gold quality
islet of Langerhans	UBERON:0000006	60.24	gold quality
hindlimb stylopod muscle	UBERON:0004252	58.86	gold quality
monocyte	CL:0000576	57.90	gold quality
skeletal muscle tissue	UBERON:0001134	56.75	gold quality
pancreas	UBERON:0001264	56.58	gold quality
tonsil	UBERON:0002372	56.53	gold quality
mucosa of transverse colon	UBERON:0004991	56.42	gold quality
calcaneal tendon	UBERON:0003701	56.32	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	56.23	gold quality
prefrontal cortex	UBERON:0000451	56.05	gold quality
putamen	UBERON:0001874	55.06	gold quality
lymph node	UBERON:0000029	55.03	gold quality
stromal cell of endometrium	CL:0002255	54.99	silver quality
lower esophagus muscularis layer	UBERON:0035833	54.75	gold quality
lower esophagus	UBERON:0013473	54.69	gold quality
superior frontal gyrus	UBERON:0002661	54.46	gold quality
placenta	UBERON:0001987	54.31	gold quality
body of pancreas	UBERON:0001150	54.20	gold quality
vermiform appendix	UBERON:0001154	53.99	gold quality
esophagus	UBERON:0001043	53.68	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	53.49	gold quality
bone marrow	UBERON:0002371	53.01	silver quality
esophagus mucosa	UBERON:0002469	52.60	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.57

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.