GALNT7-DT

Summary

GALNT7-DT (GALNT7 divergent transcript, HGNC:55604) is a long non-coding RNA gene on chromosome 4q34.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55604
Approved symbol	GALNT7-DT
Name	GALNT7 divergent transcript
Location	4q34.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000245213
Ensembl biotype	lncRNA
Entrez	101930370
RNAcentral	URS0000A7678C — lncRNA, 2501 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 26 — 26 lncRNA

ENST00000499322, ENST00000500914, ENST00000510523, ENST00000656803, ENST00000659700, ENST00000660750, ENST00000661589, ENST00000663396, ENST00000666327, ENST00000724821, ENST00000724822, ENST00000724823, ENST00000724824, ENST00000724825, ENST00000724826, ENST00000724827, ENST00000724828, ENST00000724829, ENST00000724830, ENST00000724831, ENST00000724832, ENST00000724833, ENST00000724834, ENST00000724835, ENST00000724836, ENST00000724837

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000499322 — 4 exons

Exon	Start	End
ENSE00001960661	173167962	173168113
ENSE00001961649	173168864	173169155
ENSE00001966059	173166645	173166790
ENSE00003871394	173143517	173145511

Expression profiles

Bgee: expression breadth ubiquitous, 167 present calls, max score 82.21.

Top tissues by expression

245 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.21	gold quality
colonic epithelium	UBERON:0000397	81.48	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	74.64	gold quality
sural nerve	UBERON:0015488	74.04	gold quality
buccal mucosa cell	CL:0002336	72.68	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	72.60	gold quality
tendon of biceps brachii	UBERON:0008188	72.60	silver quality
bone marrow cell	CL:0002092	71.87	silver quality
spinal cord	UBERON:0002240	71.70	gold quality
monocyte	CL:0000576	71.50	gold quality
leukocyte	CL:0000738	71.30	gold quality
lower esophagus mucosa	UBERON:0035834	70.89	gold quality
stromal cell of endometrium	CL:0002255	70.38	gold quality
ascending aorta	UBERON:0001496	69.96	gold quality
ventricular zone	UBERON:0003053	69.94	gold quality
thoracic aorta	UBERON:0001515	69.81	gold quality
descending thoracic aorta	UBERON:0002345	69.76	gold quality
right hemisphere of cerebellum	UBERON:0014890	69.76	gold quality
cerebellar hemisphere	UBERON:0002245	69.47	gold quality
cerebellar cortex	UBERON:0002129	69.38	gold quality
mucosa of transverse colon	UBERON:0004991	68.88	gold quality
oviduct epithelium	UBERON:0004804	68.75	gold quality
body of uterus	UBERON:0009853	68.61	gold quality
right testis	UBERON:0004534	68.28	gold quality
left testis	UBERON:0004533	68.13	gold quality
aorta	UBERON:0000947	67.58	gold quality
cerebellum	UBERON:0002037	67.56	gold quality
testis	UBERON:0000473	67.51	gold quality
medial globus pallidus	UBERON:0002477	67.30	silver quality
endocervix	UBERON:0000458	67.28	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.77

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• Inhibition of miR-1471 by LOC101930370 was proved by luciferase assay. Knockdown of LOC101930370 suppressed Breast Cancer cells progression. (PMID:30041193)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.