GALNT8
gene geneOn this page
Also known as GALNAC-T8
Summary
GALNT8 (polypeptide N-acetylgalactosaminyltransferase 8, HGNC:4130) is a protein-coding gene on chromosome 12p13.32, encoding Probable polypeptide N-acetylgalactosaminyltransferase 8 (Q9NY28). Probably catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor.
This gene encodes a member of the UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase (GalNAc-T) family of enzymes. GalNAc-Ts initiate mucin-type O-linked glycosylation in the Golgi apparatus by catalyzing the transfer of GalNAc to serine and threonine residues on target proteins. They are characterized by an N-terminal transmembrane domain, a stem region, a lumenal catalytic domain containing a GT1 motif and Gal/GalNAc transferase motif, and a C-terminal ricin/lectin-like domain. GalNAc-Ts have different, but overlapping, substrate specificities and patterns of expression.
Source: NCBI Gene 26290 — RefSeq curated summary.
At a glance
- GWAS associations: 21
- Clinical variants (ClinVar): 109 total — 1 likely-pathogenic
- MANE Select transcript:
NM_017417
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:4130 |
| Approved symbol | GALNT8 |
| Name | polypeptide N-acetylgalactosaminyltransferase 8 |
| Location | 12p13.32 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | GALNAC-T8 |
| Ensembl gene | ENSG00000130035 |
| Ensembl biotype | protein_coding |
| OMIM | 606250 |
| Entrez | 26290 |
Gene structure
Transcript identifiers
Ensembl transcripts: 6 — 4 protein_coding, 2 protein_coding_CDS_not_defined
ENST00000252318, ENST00000535354, ENST00000541339, ENST00000542998, ENST00000648865, ENST00000902363
RefSeq mRNA: 1 — MANE Select: NM_017417
NM_017417
CCDS: CCDS8533
Canonical transcript exons
ENST00000252318 — 11 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000893107 | 4720400 | 4720888 |
| ENSE00000893110 | 4744517 | 4744700 |
| ENSE00000893111 | 4745429 | 4745626 |
| ENSE00000893112 | 4746144 | 4746258 |
| ENSE00000893113 | 4760958 | 4761143 |
| ENSE00000893114 | 4763253 | 4763390 |
| ENSE00000893115 | 4763952 | 4764047 |
| ENSE00000893116 | 4765379 | 4765546 |
| ENSE00000893117 | 4772445 | 4772726 |
| ENSE00003517748 | 4739163 | 4739329 |
| ENSE00003636613 | 4726532 | 4726829 |
Expression profiles
Bgee: expression breadth ubiquitous, 196 present calls, max score 89.54.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1757 / max 35.1181, expressed in 73 samples.
FANTOM5 promoters (6 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 123590 | 0.4152 | 72 |
| 123585 | 0.1253 | 61 |
| 123589 | 0.0531 | 20 |
| 123582 | 0.0410 | 13 |
| 123588 | 0.0312 | 15 |
| 123583 | 0.0094 | 4 |
Top tissues by expression
260 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| cortical plate | UBERON:0005343 | 89.54 | gold quality |
| vena cava | UBERON:0004087 | 89.15 | silver quality |
| rectum | UBERON:0001052 | 88.35 | gold quality |
| right frontal lobe | UBERON:0002810 | 88.35 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 88.32 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 88.19 | gold quality |
| prefrontal cortex | UBERON:0000451 | 88.01 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 88.00 | gold quality |
| cingulate cortex | UBERON:0003027 | 87.99 | gold quality |
| neocortex | UBERON:0001950 | 86.80 | gold quality |
| pons | UBERON:0000988 | 86.78 | gold quality |
| frontal cortex | UBERON:0001870 | 86.78 | gold quality |
| cerebellar vermis | UBERON:0004720 | 86.78 | silver quality |
| endothelial cell | CL:0000115 | 86.47 | silver quality |
| tongue squamous epithelium | UBERON:0006919 | 86.27 | silver quality |
| substantia nigra pars compacta | UBERON:0001965 | 86.05 | gold quality |
| substantia nigra pars reticulata | UBERON:0001966 | 85.91 | gold quality |
| cerebral cortex | UBERON:0000956 | 85.59 | gold quality |
| Brodmann (1909) area 46 | UBERON:0006483 | 85.49 | gold quality |
| occipital lobe | UBERON:0002021 | 85.43 | gold quality |
| primary visual cortex | UBERON:0002436 | 85.11 | gold quality |
| ventral tegmental area | UBERON:0002691 | 84.55 | silver quality |
| dorsal root ganglion | UBERON:0000044 | 84.13 | gold quality |
| orbitofrontal cortex | UBERON:0004167 | 84.08 | silver quality |
| subthalamic nucleus | UBERON:0001906 | 84.07 | silver quality |
| lateral globus pallidus | UBERON:0002476 | 83.89 | silver quality |
| hypothalamus | UBERON:0001898 | 83.88 | gold quality |
| medulla oblongata | UBERON:0001896 | 83.63 | silver quality |
| inferior olivary complex | UBERON:0002127 | 83.30 | silver quality |
| left testis | UBERON:0004533 | 83.24 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 3.55 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
8 targeting GALNT8, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3659 | 99.70 | 67.97 | 694 |
| HSA-MIR-4643 | 99.49 | 67.63 | 1791 |
| HSA-MIR-3160-5P | 99.28 | 69.07 | 1938 |
| HSA-MIR-320E | 97.49 | 65.96 | 865 |
| HSA-MIR-122-5P | 97.23 | 64.92 | 1024 |
| HSA-MIR-3192-5P | 96.98 | 65.76 | 1926 |
| HSA-MIR-4436B-5P | 96.71 | 68.37 | 1346 |
| HSA-MIR-1258 | 96.08 | 67.74 | 700 |
Literature-anchored findings (GeneRIF, showing 6)
- This enzyme initiates O-glycan synthesis in IgA1 the hinge region. (PMID:12438318)
- GALNT8 variants were associated with treatment outcome independently of HCV genotype. (PMID:23034592)
- we integrated different computational tools to perform the in silico analysis of clinically significant mutations (nsSNPs/single amino acid change) at both functional and structural levels, found in human GALNT3, GALNT8, GALNT12, and GALNT13 genes. (PMID:24038392)
- Dynamic tuning of chromatin co-drives the activation of a gene cluster that includes the lncRNA GAU1 and the protein-coding gene GALNT8, thereby inducing tumorigenesis. (PMID:29741668)
- Expression of GALNT8 and O-glycosylation of BMP receptor 1A suppress breast cancer cell proliferation by upregulating ERalpha levels. (PMID:34743989)
- GALNT8 suppresses breast cancer cell metastasis potential by regulating EGFR O-GalNAcylation. (PMID:35220009)
Cross-species orthologs
9 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | galnt8a.2 | ENSDARG00000011869 |
| danio_rerio | galnt8a.1 | ENSDARG00000012355 |
| danio_rerio | galnt8b.1 | ENSDARG00000045851 |
| danio_rerio | galnt8b.2 | ENSDARG00000095324 |
| danio_rerio | GALNT8 | ENSDARG00000115940 |
| drosophila_melanogaster | Pgant5 | FBGN0031681 |
| drosophila_melanogaster | Pgant9 | FBGN0050463 |
| caenorhabditis_elegans | WBGENE00001628 | |
| caenorhabditis_elegans | WBGENE00001630 |
Paralogs (19): GALNT16 (ENSG00000100626), GALNTL5 (ENSG00000106648), GALNT7 (ENSG00000109586), GALNT18 (ENSG00000110328), GALNT3 (ENSG00000115339), GALNT12 (ENSG00000119514), GALNT15 (ENSG00000131386), GALNT5 (ENSG00000136542), GALNT6 (ENSG00000139629), GALNT1 (ENSG00000141429), GALNT2 (ENSG00000143641), GALNT13 (ENSG00000144278), GALNT14 (ENSG00000158089), GALNT10 (ENSG00000164574), GALNTL6 (ENSG00000174473), GALNT11 (ENSG00000178234), GALNT9 (ENSG00000182870), GALNT17 (ENSG00000185274), GALNT4 (ENSG00000257594)
Protein
Protein identifiers
Probable polypeptide N-acetylgalactosaminyltransferase 8 — Q9NY28 (reviewed: Q9NY28)
Alternative names: Polypeptide GalNAc transferase 8, Protein-UDP acetylgalactosaminyltransferase 8, UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 8
All UniProt accessions (3): Q9NY28, H0YFU9, H0YGU9
UniProt curated annotations — full annotation on UniProt →
Function. Probably catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor.
Subcellular location. Golgi apparatus membrane.
Tissue specificity. Widely expressed. Expressed in heart, skeletal muscle, kidney, liver, small intestine and placenta. Weakly expressed in colon, thymus, spleen, lung and leukocyte.
Domain organisation. There are two conserved domains in the glycosyltransferase region: the N-terminal domain (domain A, also called GT1 motif), which is probably involved in manganese coordination and substrate binding and the C-terminal domain (domain B, also called Gal/GalNAc-T motif), which is probably involved in catalytic reaction and UDP-Gal binding. The ricin B-type lectin domain binds to GalNAc and contributes to the glycopeptide specificity.
Pathway. Protein modification; protein glycosylation.
Similarity. Belongs to the glycosyltransferase 2 family. GalNAc-T subfamily.
RefSeq proteins (1): NP_059113* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000772 | Ricin_B_lectin | Domain |
| IPR001173 | Glyco_trans_2-like | Domain |
| IPR029044 | Nucleotide-diphossugar_trans | Homologous_superfamily |
| IPR035992 | Ricin_B-like_lectins | Homologous_superfamily |
| IPR045885 | GalNAc-T | Domain |
Pfam: PF00535, PF00652
Catalyzed reactions (Rhea), 2 shown:
- L-seryl-[protein] + UDP-N-acetyl-alpha-D-galactosamine = a 3-O-[N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + UDP + H(+) (RHEA:23956)
- L-threonyl-[protein] + UDP-N-acetyl-alpha-D-galactosamine = a 3-O-[N-acetyl-alpha-D-galactosaminyl]-L-threonyl-[protein] + UDP + H(+) (RHEA:52424)
UniProt features (32 total): sequence variant 10, binding site 7, disulfide bond 5, glycosylation site 3, topological domain 2, region of interest 2, chain 1, transmembrane region 1, domain 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9NY28-F1 | 86.44 | 0.75 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (7): 280; 409; 412; 417; 221; 255; 278
Disulfide bonds (5): 171–404, 395–474, 509–525, 556–571, 599–617
Glycosylation sites (3): 85, 107, 160
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-913709 | O-linked glycosylation of mucins |
MSigDB gene sets: 36 (showing top):
ROVERSI_GLIOMA_COPY_NUMBER_UP, GOBP_CARBOHYDRATE_DERIVATIVE_METABOLIC_PROCESS, BLALOCK_ALZHEIMERS_DISEASE_UP, GOBP_CARBOHYDRATE_DERIVATIVE_BIOSYNTHETIC_PROCESS, WAGNER_APO2_SENSITIVITY, GOBP_PROTEIN_O_LINKED_GLYCOSYLATION_VIA_N_ACETYL_GALACTOSAMINE, ACEVEDO_METHYLATED_IN_LIVER_CANCER_DN, GOBP_PROTEIN_O_LINKED_GLYCOSYLATION, GOBP_GLYCOPROTEIN_METABOLIC_PROCESS, GOMF_ACETYLGALACTOSAMINYLTRANSFERASE_ACTIVITY, GOMF_HEXOSYLTRANSFERASE_ACTIVITY, GOMF_GLYCOSYLTRANSFERASE_ACTIVITY, GOMF_POLYPEPTIDE_N_ACETYLGALACTOSAMINYLTRANSFERASE_ACTIVITY, GOMF_UDP_GLYCOSYLTRANSFERASE_ACTIVITY, REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION
GO Biological Process (3): protein O-linked glycosylation (GO:0006493), protein O-linked glycosylation via N-acetylgalactosamine (GO:0016266), obsolete protein glycosylation (GO:0006486)
GO Molecular Function (5): polypeptide N-acetylgalactosaminyltransferase activity (GO:0004653), carbohydrate binding (GO:0030246), metal ion binding (GO:0046872), transferase activity (GO:0016740), glycosyltransferase activity (GO:0016757)
GO Cellular Component (3): Golgi membrane (GO:0000139), Golgi apparatus (GO:0005794), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| O-linked glycosylation | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| glycoprotein biosynthetic process | 1 |
| protein O-linked glycosylation | 1 |
| acetylgalactosaminyltransferase activity | 1 |
| catalytic activity, acting on a protein | 1 |
| binding | 1 |
| cation binding | 1 |
| catalytic activity | 1 |
| transferase activity | 1 |
| Golgi apparatus | 1 |
| bounding membrane of organelle | 1 |
| cytoplasm | 1 |
| endomembrane system | 1 |
| intracellular membrane-bounded organelle | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
330 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| GALNT8 | B4GALNT1 | Q00973 | 850 |
| GALNT8 | TCEA1 | P23193 | 392 |
| GALNT8 | C1GALT1 | Q9NS00 | 386 |
| GALNT8 | CANT1 | Q8WVQ1 | 377 |
| GALNT8 | DNAJC17 | Q9NVM6 | 337 |
| GALNT8 | GCNT3 | O95395 | 319 |
| GALNT8 | GCNT1 | Q02742 | 319 |
| GALNT8 | C1GALT1C1 | Q96EU7 | 319 |
| GALNT8 | ST6GALNAC1 | Q9NSC7 | 316 |
| GALNT8 | SLC15A5 | A6NIM6 | 313 |
| GALNT8 | CDADC1 | Q9BWV3 | 302 |
| GALNT8 | UBIAD1 | Q9Y5Z9 | 273 |
| GALNT8 | PIGL | Q9Y2B2 | 271 |
| GALNT8 | SPDYE16 | A6NNV3 | 266 |
| GALNT8 | GANAB | Q14697 | 260 |
IntAct
4 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CSNK2A2 | CNOT1 | psi-mi:“MI:0914”(association) | 0.350 |
| GALNT8 | CANX | psi-mi:“MI:0914”(association) | 0.350 |
| CSNK2A2 | MEN1 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (11): GALNT8 (Affinity Capture-MS), DOLK (Two-hybrid), ITPRIP (Affinity Capture-MS), ATL3 (Affinity Capture-MS), SLC9A8 (Affinity Capture-MS), RMND1 (Affinity Capture-MS), CANX (Affinity Capture-MS), TMEM164 (Affinity Capture-MS), GALNT8 (Affinity Capture-MS), GALNT8 (Cross-Linking-MS (XL-MS)), GALNT8 (Affinity Capture-RNA)
ESM2 similar proteins: A0A2D0TC04, A1A4K5, A2VDP5, A8K7I4, J3SBP3, J3SEZ3, O14638, P06802, P0DQQ4, P15396, P18563, P18564, P22413, P54793, P97259, P97675, Q08834, Q09328, Q13822, Q14CN2, Q1RPR6, Q29444, Q2TU62, Q32KH8, Q3SZI1, Q4FZV0, Q5FYA8, Q5GF25, Q5R5M5, Q64610, Q6AYF4, Q6DDW2, Q6DYE8, Q6NXH2, Q6PT52, Q6Q473, Q863C4, Q8BTJ4, Q8K1B9, Q8K2I4
Diamond homologs: A8Y236, H0ZAB5, O08832, O08912, O45293, O45947, O61394, O61397, O88422, P34678, P70419, Q07537, Q10471, Q10472, Q10473, Q14435, Q29121, Q49A17, Q5EA41, Q5RFJ6, Q6DJR8, Q6IS24, Q6P6V1, Q6P9A2, Q6P9S7, Q6PB93, Q6UE39, Q6WV16, Q6WV17, Q6WV19, Q6WV20, Q7K755, Q7TT15, Q7Z4T8, Q7Z7M9, Q80VA0, Q86SF2, Q86SR1, Q8BGT9, Q8BVG5
SIGNOR signaling
1 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| GALNT8 | “down-regulates activity” | EGFR | glycosylation |
Disease & clinical
Clinical variants and AI predictions
ClinVar
109 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 1 |
| Uncertain significance | 91 |
| Likely benign | 5 |
| Benign | 5 |
Top pathogenic / likely-pathogenic (1)
| Variant ID | HGVS | Classification |
|---|---|---|
| 563976 | GRCh37/hg19 12p13.32-13.31(chr12:4305058-6066141)x1 | Likely pathogenic |
SpliceAI
2447 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 12:4720882:GATC:G | donor_gain | 1.0000 |
| 12:4720887:GA:G | donor_gain | 1.0000 |
| 12:4720889:G:GG | donor_gain | 1.0000 |
| 12:4739158:TATA:T | acceptor_loss | 1.0000 |
| 12:4739159:ATAG:A | acceptor_loss | 1.0000 |
| 12:4739160:TAGA:T | acceptor_loss | 1.0000 |
| 12:4739161:A:AG | acceptor_gain | 1.0000 |
| 12:4739161:AGA:A | acceptor_loss | 1.0000 |
| 12:4739161:AGATG:A | acceptor_loss | 1.0000 |
| 12:4739162:G:GG | acceptor_gain | 1.0000 |
| 12:4739162:G:GT | acceptor_loss | 1.0000 |
| 12:4739162:GAT:G | acceptor_gain | 1.0000 |
| 12:4739326:AATGG:A | donor_loss | 1.0000 |
| 12:4739327:ATGGT:A | donor_loss | 1.0000 |
| 12:4739329:GGTGA:G | donor_loss | 1.0000 |
| 12:4739330:GT:G | donor_loss | 1.0000 |
| 12:4739331:T:A | donor_loss | 1.0000 |
| 12:4744698:GTG:G | donor_gain | 1.0000 |
| 12:4745622:GTGAA:G | donor_gain | 1.0000 |
| 12:4745627:G:GG | donor_gain | 1.0000 |
| 12:4760953:T:TA | acceptor_gain | 1.0000 |
| 12:4760955:CA:C | acceptor_loss | 1.0000 |
| 12:4760956:A:AC | acceptor_loss | 1.0000 |
| 12:4760956:A:AG | acceptor_gain | 1.0000 |
| 12:4760956:AG:A | acceptor_gain | 1.0000 |
| 12:4760957:G:GA | acceptor_gain | 1.0000 |
| 12:4760957:GG:G | acceptor_gain | 1.0000 |
| 12:4760957:GGT:G | acceptor_gain | 1.0000 |
| 12:4760957:GGTGT:G | acceptor_gain | 1.0000 |
| 12:4761140:CCAGG:C | donor_loss | 1.0000 |
AlphaMissense
4196 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 12:4745555:G:C | W329C | 0.996 |
| 12:4745555:G:T | W329C | 0.996 |
| 12:4745553:T:A | W329R | 0.995 |
| 12:4745553:T:C | W329R | 0.995 |
| 12:4746250:A:C | S389R | 0.995 |
| 12:4746252:C:A | S389R | 0.995 |
| 12:4746252:C:G | S389R | 0.995 |
| 12:4745547:T:C | F327L | 0.991 |
| 12:4745549:T:A | F327L | 0.991 |
| 12:4745549:T:G | F327L | 0.991 |
| 12:4746240:C:A | N385K | 0.991 |
| 12:4746240:C:G | N385K | 0.991 |
| 12:4761082:C:A | A433D | 0.990 |
| 12:4761090:T:A | W436R | 0.990 |
| 12:4761090:T:C | W436R | 0.990 |
| 12:4763313:T:A | C474S | 0.990 |
| 12:4763314:G:C | C474S | 0.990 |
| 12:4772549:G:C | W622C | 0.990 |
| 12:4772549:G:T | W622C | 0.990 |
| 12:4746145:A:C | S354R | 0.989 |
| 12:4746147:T:A | S354R | 0.989 |
| 12:4746147:T:G | S354R | 0.989 |
| 12:4760961:T:A | W393R | 0.988 |
| 12:4760961:T:C | W393R | 0.988 |
| 12:4744699:T:A | W287R | 0.987 |
| 12:4744699:T:C | W287R | 0.987 |
| 12:4761076:G:C | R431P | 0.987 |
| 12:4763331:T:G | Y480D | 0.987 |
| 12:4765534:G:C | W583C | 0.987 |
| 12:4765534:G:T | W583C | 0.987 |
dbSNP variants (sampled 300 via entrez): RS1000033466 (12:4740412 T>G), RS1000086677 (12:4740713 A>G,T), RS1000124317 (12:4764838 C>G,T), RS1000173811 (12:4767505 T>C), RS1000224886 (12:4771708 C>T), RS1000371831 (12:4727201 G>C), RS1000377831 (12:4746875 A>C,G), RS1000484628 (12:4754025 C>A,T), RS1000518479 (12:4746469 G>T), RS1000625540 (12:4735608 G>A,C), RS1000823493 (12:4728469 G>A), RS1000846543 (12:4753708 T>A), RS1000873385 (12:4755950 C>G,T), RS1000929864 (12:4748354 G>T), RS1001085009 (12:4728705 C>T)
Disease associations
OMIM: gene MIM:606250 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
21 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST003875_10 | Gut microbiota (bacterial taxa) | 7.000000e-09 |
| GCST010796_5354 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-12 |
| GCST010796_5355 | Electrocardiogram morphology (amplitude at temporal datapoints) | 2.000000e-12 |
| GCST010796_5356 | Electrocardiogram morphology (amplitude at temporal datapoints) | 2.000000e-12 |
| GCST010796_5357 | Electrocardiogram morphology (amplitude at temporal datapoints) | 2.000000e-11 |
| GCST010796_5358 | Electrocardiogram morphology (amplitude at temporal datapoints) | 6.000000e-12 |
| GCST010796_5359 | Electrocardiogram morphology (amplitude at temporal datapoints) | 2.000000e-12 |
| GCST010796_5360 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-10 |
| GCST010796_5361 | Electrocardiogram morphology (amplitude at temporal datapoints) | 2.000000e-10 |
| GCST010796_5362 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-10 |
| GCST010796_5363 | Electrocardiogram morphology (amplitude at temporal datapoints) | 2.000000e-09 |
| GCST010796_5364 | Electrocardiogram morphology (amplitude at temporal datapoints) | 2.000000e-08 |
| GCST010796_5365 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-08 |
| GCST010796_5366 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-09 |
| GCST010796_5367 | Electrocardiogram morphology (amplitude at temporal datapoints) | 2.000000e-09 |
| GCST010796_5368 | Electrocardiogram morphology (amplitude at temporal datapoints) | 2.000000e-10 |
| GCST010796_5369 | Electrocardiogram morphology (amplitude at temporal datapoints) | 6.000000e-11 |
| GCST010796_5370 | Electrocardiogram morphology (amplitude at temporal datapoints) | 6.000000e-10 |
| GCST010796_5371 | Electrocardiogram morphology (amplitude at temporal datapoints) | 4.000000e-09 |
| GCST010796_5372 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-09 |
| GCST010796_5373 | Electrocardiogram morphology (amplitude at temporal datapoints) | 7.000000e-10 |
EFO canonical traits (3, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0007874 | gut microbiome measurement |
| EFO:0007883 | taxonomic microbiome measurement |
| EFO:0004327 | electrocardiography |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
11 total (human), top 11 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | affects methylation, increases methylation | 2 |
| FR900359 | increases phosphorylation | 1 |
| triphenyl phosphate | affects expression | 1 |
| arsenite | increases methylation | 1 |
| benzo(e)pyrene | increases methylation | 1 |
| Sunitinib | decreases expression | 1 |
| Diethylhexyl Phthalate | decreases expression | 1 |
| Folic Acid | increases expression | 1 |
| Methapyrilene | increases methylation | 1 |
| Aflatoxin B1 | decreases methylation | 1 |
| Antirheumatic Agents | decreases expression | 1 |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.