GALNTL6-AS1

Summary

GALNTL6-AS1 (GALNTL6 antisense RNA 1, HGNC:54079) is a long non-coding RNA gene on chromosome 4q34.1.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54079
Approved symbol	GALNTL6-AS1
Name	GALNTL6 antisense RNA 1
Location	4q34.1
Locus type	RNA, long non-coding
Status	Approved
Entrez	101928314
RNAcentral	URS00007E418F — lncRNA, 2121 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS10000607 (4:172706974 A>G), RS1000072086 (4:172711847 G>C), RS1000119433 (4:172728020 C>A), RS1000134062 (4:172724170 C>A,T), RS1000150612 (4:172647779 T>G), RS1000192424 (4:172635208 T>C), RS10002201 (4:172712361 A>G,T), RS1000250342 (4:172641555 C>T), RS1000267764 (4:172686743 G>C), RS1000269555 (4:172698394 C>T), RS1000273058 (4:172703880 T>C), RS1000303564 (4:172641362 T>C), RS1000334404 (4:172685151 G>T), RS1000352561 (4:172726697 C>A), RS1000488193 (4:172692586 A>C)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.