GANAB
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Also known as GluIIG2ANKIAA0088GIIAGIIalpha
Summary
GANAB (glucosidase II alpha subunit, HGNC:4138) is a protein-coding gene on chromosome 11q12.3, encoding Neutral alpha-glucosidase AB (Q14697). Catalytic subunit of glucosidase II that cleaves sequentially the 2 innermost alpha-1,3-linked glucose residues from the Glc(2)Man(9)GlcNAc(2) oligosaccharide precursor of immature glycoproteins. It is a selective cancer dependency (DepMap: 10.7% of cell lines) and haploinsufficient (ClinGen: sufficient evidence).
This gene encodes the alpha subunit of glucosidase II and a member of the glycosyl hydrolase 31 family of proteins. The heterodimeric enzyme glucosidase II plays a role in protein folding and quality control by cleaving glucose residues from immature glycoproteins in the endoplasmic reticulum. Expression of the encoded protein is elevated in lung tumor tissue and in response to UV irradiation. Mutations in this gene cause autosomal-dominant polycystic kidney and liver disease.
Source: NCBI Gene 23193 — RefSeq curated summary.
At a glance
- Gene–disease (curated): polycystic kidney disease 3 with or without polycystic liver disease (Definitive, ClinGen) — +1 more curated relationship
- GWAS associations: 9
- Clinical variants (ClinVar): 631 total — 18 pathogenic, 33 likely-pathogenic
- Phenotypes (HPO): 33
- Druggable target: yes — 1 molecules with ChEMBL bioactivity
- Cancer dependency (DepMap): dependent in 10.7% of screened cell lines
- Dosage sensitivity (ClinGen): haploinsufficiency sufficient evidence, triplosensitivity no evidence
- MANE Select transcript:
NM_198334
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:4138 |
| Approved symbol | GANAB |
| Name | glucosidase II alpha subunit |
| Location | 11q12.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | GluII, G2AN, KIAA0088, GIIA, GIIalpha |
| Ensembl gene | ENSG00000089597 |
| Ensembl biotype | protein_coding |
| OMIM | 104160 |
| Entrez | 23193 |
Gene structure
Transcript identifiers
Ensembl transcripts: 26 — 15 protein_coding, 5 retained_intron, 4 nonsense_mediated_decay, 2 protein_coding_CDS_not_defined
ENST00000346178, ENST00000356638, ENST00000524437, ENST00000525994, ENST00000526210, ENST00000526392, ENST00000526732, ENST00000528503, ENST00000529737, ENST00000531563, ENST00000532402, ENST00000534419, ENST00000534422, ENST00000534613, ENST00000534779, ENST00000540933, ENST00000648273, ENST00000881668, ENST00000881669, ENST00000881670, ENST00000933198, ENST00000933199, ENST00000933200, ENST00000933201, ENST00000933202, ENST00000933203
RefSeq mRNA: 9 — MANE Select: NM_198334
NM_001278192, NM_001278193, NM_001278194, NM_001329222, NM_001329223, NM_001329224, NM_001329225, NM_198334, NM_198335
CCDS: CCDS41656, CCDS60817, CCDS60818, CCDS8026
Canonical transcript exons
ENST00000356638 — 24 exons
| Exon | Start | End |
|---|---|---|
| ENSE00002144669 | 62624829 | 62625924 |
| ENSE00002196675 | 62646562 | 62646613 |
| ENSE00003465153 | 62639627 | 62639731 |
| ENSE00003466387 | 62631030 | 62631183 |
| ENSE00003503823 | 62638983 | 62639110 |
| ENSE00003506730 | 62632565 | 62632745 |
| ENSE00003517037 | 62633005 | 62633101 |
| ENSE00003517611 | 62639359 | 62639467 |
| ENSE00003518680 | 62630601 | 62630836 |
| ENSE00003518861 | 62630379 | 62630505 |
| ENSE00003528430 | 62629194 | 62629295 |
| ENSE00003528527 | 62633445 | 62633514 |
| ENSE00003531263 | 62629588 | 62629684 |
| ENSE00003547996 | 62628769 | 62629012 |
| ENSE00003550204 | 62627289 | 62627353 |
| ENSE00003551537 | 62626065 | 62626165 |
| ENSE00003572313 | 62634821 | 62635000 |
| ENSE00003584827 | 62626571 | 62626684 |
| ENSE00003587074 | 62627048 | 62627124 |
| ENSE00003595131 | 62633184 | 62633271 |
| ENSE00003623493 | 62626860 | 62626934 |
| ENSE00003667192 | 62629814 | 62629957 |
| ENSE00003682476 | 62630197 | 62630276 |
| ENSE00003692690 | 62626335 | 62626447 |
Expression profiles
Bgee: expression breadth ubiquitous, 293 present calls, max score 99.35.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 150.3251 / max 1408.6541, expressed in 1825 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 120180 | 150.0046 | 1825 |
| 120177 | 0.3206 | 141 |
Top tissues by expression
295 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| stromal cell of endometrium | CL:0002255 | 99.35 | gold quality |
| islet of Langerhans | UBERON:0000006 | 98.88 | gold quality |
| ventricular zone | UBERON:0003053 | 98.69 | gold quality |
| right ovary | UBERON:0002118 | 98.66 | gold quality |
| left ovary | UBERON:0002119 | 98.56 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 98.54 | gold quality |
| body of pancreas | UBERON:0001150 | 98.49 | gold quality |
| endocervix | UBERON:0000458 | 98.44 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 98.43 | gold quality |
| body of uterus | UBERON:0009853 | 98.40 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 98.37 | gold quality |
| right uterine tube | UBERON:0001302 | 98.29 | gold quality |
| rectum | UBERON:0001052 | 98.25 | gold quality |
| left uterine tube | UBERON:0001303 | 98.25 | gold quality |
| ectocervix | UBERON:0012249 | 98.17 | gold quality |
| body of stomach | UBERON:0001161 | 98.13 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 98.11 | gold quality |
| right coronary artery | UBERON:0001625 | 98.05 | gold quality |
| thyroid gland | UBERON:0002046 | 98.05 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 98.05 | gold quality |
| granulocyte | CL:0000094 | 98.02 | gold quality |
| minor salivary gland | UBERON:0001830 | 97.98 | gold quality |
| gall bladder | UBERON:0002110 | 97.98 | gold quality |
| transverse colon | UBERON:0001157 | 97.95 | gold quality |
| tibial nerve | UBERON:0001323 | 97.94 | gold quality |
| upper lobe of lung | UBERON:0008948 | 97.93 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 97.92 | gold quality |
| pituitary gland | UBERON:0000007 | 97.91 | gold quality |
| stomach | UBERON:0000945 | 97.89 | gold quality |
| adenohypophysis | UBERON:0002196 | 97.89 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-7249 | no | 67.87 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
83 targeting GANAB, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4481 | 100.00 | 66.42 | 1669 |
| HSA-MIR-6870-5P | 99.99 | 68.55 | 2115 |
| HSA-MIR-4723-5P | 99.97 | 68.70 | 2034 |
| HSA-MIR-5698 | 99.97 | 68.49 | 2029 |
| HSA-MIR-7111-5P | 99.97 | 68.48 | 2062 |
| HSA-MIR-6755-5P | 99.95 | 65.59 | 464 |
| HSA-MIR-4778-3P | 99.93 | 70.40 | 1818 |
| HSA-MIR-5680 | 99.91 | 69.83 | 3421 |
| HSA-MIR-3151-5P | 99.86 | 63.83 | 1069 |
| HSA-MIR-4728-5P | 99.85 | 69.39 | 4718 |
| HSA-MIR-629-3P | 99.85 | 67.99 | 1875 |
| HSA-MIR-1323 | 99.83 | 69.89 | 2471 |
| HSA-MIR-6785-5P | 99.82 | 68.68 | 4428 |
| HSA-MIR-6739-5P | 99.80 | 67.87 | 2806 |
| HSA-MIR-204-5P | 99.79 | 71.62 | 2439 |
| HSA-MIR-211-5P | 99.79 | 71.65 | 2440 |
| HSA-MIR-548AJ-5P | 99.78 | 71.12 | 3085 |
| HSA-MIR-548F-5P | 99.78 | 71.02 | 3093 |
| HSA-MIR-548G-5P | 99.78 | 71.12 | 3085 |
| HSA-MIR-548X-5P | 99.78 | 71.12 | 3085 |
| HSA-MIR-6733-5P | 99.74 | 67.94 | 2759 |
| HSA-MIR-149-3P | 99.72 | 68.22 | 3963 |
| HSA-MIR-6883-5P | 99.69 | 68.05 | 3785 |
| HSA-MIR-298 | 99.63 | 67.56 | 1916 |
| HSA-MIR-12122 | 99.56 | 69.33 | 1672 |
| HSA-MIR-6716-5P | 99.56 | 68.62 | 1244 |
| HSA-MIR-3153 | 99.55 | 67.59 | 2337 |
| HSA-MIR-199A-5P | 99.51 | 69.71 | 1107 |
| HSA-MIR-199B-5P | 99.51 | 69.74 | 1098 |
| HSA-MIR-6727-3P | 99.49 | 65.92 | 1333 |
Functional genomics
ClinGen dosage: haploinsufficiency 3 (sufficient evidence), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map
DepMap (CRISPR cell-line fitness): dependent in 10.7% of screened cell lines.
Literature-anchored findings (GeneRIF, showing 18)
- the apparent occurrence of an unusual TG 3’ splice site in intron 18 is discussed (PMID:17672918)
- PKD3 contributes to growth and survival of prostate cancer cells (PMID:18483269)
- reveal a novel distinction between the exocrine and endocrine cells of the pancreas and further identify PKD3 as a signaling molecule that promotes hormone-stimulated amylase secretion (PMID:19028687)
- In males being treated for infertility, neutral alpha-glucosidase activity correlated with the percentage of sperm DNA fragmentation. (PMID:19737279)
- Loss of the tumor suppression function of Hsp60 or GANAB contribute to aggressive cancers. (PMID:21642380)
- these data suggest that PKD2 and PKD3 coordinate to promote prostate cancer cell invasion through p65 NF-kappaB- and HDAC1-mediated expression and activation of uPA. (PMID:22797919)
- The high frequency of glucosidase II overexpression, which to the best of our knowledge has not been previously described, indicates its crucial roles in lung tumorigenesis and is thus a valuable biomarker (PMID:24008518)
- Data show that similar to a knockdown of serine/threonine kinase protein kinase D3 (PKD3), treatment with this inhibitor targets all tumorigenic processes in vitro and decreases growth of primary tumors and metastasis in vivo (PMID:25852060)
- Mutations in GANAB gene is associated with Autosomal-Dominant Polycystic Kidney and Liver Disease. (PMID:27259053)
- used whole exome sequencing in a discovery cohort of 102 unrelated patients who were excluded for mutations in the 2 most common polycystic liver disease genes, PRKCSH and SEC63, to identify heterozygous loss-of-function mutations in 3 additional genes, ALG8, GANAB, and SEC61B. Similarly to PRKCSH and SEC63, these genes encode proteins that are integral to the protein biogenesis pathway in the endoplasmic reticulum. (PMID:28375157)
- Case Report: GANAB mutation leading to autosomal dominant polycystic kidney disease. (PMID:28784653)
- a novel intronic nine base pair deletion in the vicinity of the GANAB exon 24 splice donor, is reported. (PMID:29243290)
- Our data indicate that PKD3 functions downstream of PKCiota to affect the cytokine-mediated induction of MMP1 and MMP13 in human chondrocytes. (PMID:29652915)
- Novel GANAB variants associated with polycystic liver disease. (PMID:33097077)
- PKD3 promotes metastasis and growth of oral squamous cell carcinoma through positive feedback regulation with PD-L1 and activation of ERK-STAT1/3-EMT signalling. (PMID:33692335)
- Protein Kinase D3 Promotes the Reconstruction of OSCC Immune Escape Niche Via Regulating MHC-I and Immune Inhibit Molecules Expression. (PMID:34545012)
- Glycoprotein alpha-Subunit of Glucosidase II (GIIalpha) is a novel prognostic biomarker correlated with unfavorable outcome of urothelial carcinoma. (PMID:35879690)
- ERVW-1 Activates ATF6-Mediated Unfolded Protein Response by Decreasing GANAB in Recent-Onset Schizophrenia. (PMID:37376599)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ganabb | ENSDARG00000076811 |
| danio_rerio | ganaba | ENSDARG00000076888 |
| mus_musculus | Ganab | ENSMUSG00000071650 |
| rattus_norvegicus | Ganab | ENSRNOG00000019724 |
| caenorhabditis_elegans | WBGENE00019895 |
Paralogs (6): SI (ENSG00000090402), MYORG (ENSG00000164976), GAA (ENSG00000171298), GANC (ENSG00000214013), MGAM (ENSG00000257335), MGAM2 (ENSG00000257743)
Protein
Protein identifiers
Neutral alpha-glucosidase AB — Q14697 (reviewed: Q14697)
Alternative names: Alpha-glucosidase 2, Glucosidase II subunit alpha
All UniProt accessions (6): Q14697, E9PKU7, E9PNH1, E9PQ69, F5H6X6, V9HWJ0
UniProt curated annotations — full annotation on UniProt →
Function. Catalytic subunit of glucosidase II that cleaves sequentially the 2 innermost alpha-1,3-linked glucose residues from the Glc(2)Man(9)GlcNAc(2) oligosaccharide precursor of immature glycoproteins. Required for PKD1/Polycystin-1 and PKD2/Polycystin-2 maturation and localization to the cell surface and cilia.
Subunit / interactions. Heterodimer of a catalytic alpha subunit (GANAB) and a beta subunit (PRKCSH). Binds glycosylated PTPRC.
Subcellular location. Endoplasmic reticulum. Golgi apparatus. Melanosome.
Tissue specificity. Detected in placenta. Isoform 1 and isoform 2 are expressed in the kidney and liver.
Disease relevance. Polycystic kidney disease 3 with or without polycystic liver disease (PKD3) [MIM:600666] A form of polycystic kidney disease, a disorder characterized by progressive formation and enlargement of cysts in both kidneys, typically leading to end-stage renal disease in adult life. Cysts also occur in other organs, particularly the liver. PKD3 inheritance is autosomal dominant. The disease is caused by variants affecting the gene represented in this entry. GANAB variations may act as a disease modifier in autosomal dominant polycystic liver disease in patients who have causative mutations in other genes, such as PKHD1 or ALG8.
Activity regulation. Inhibited by deoxynojirimycin.
Pathway. Glycan metabolism; N-glycan metabolism.
Miscellaneous. May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay.
Similarity. Belongs to the glycosyl hydrolase 31 family.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q14697-1 | 1 | yes |
| Q14697-2 | 2 | |
| Q14697-3 | 3 |
RefSeq proteins (9): NP_001265121, NP_001265122, NP_001265123, NP_001316151, NP_001316152, NP_001316153, NP_001316154, NP_938148, NP_938149 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000322 | Glyco_hydro_31_TIM | Domain |
| IPR011013 | Gal_mutarotase_sf_dom | Homologous_superfamily |
| IPR013780 | Glyco_hydro_b | Homologous_superfamily |
| IPR017853 | GH_hydrolase_sf | Homologous_superfamily |
| IPR025887 | Glyco_hydro_31_N_dom | Domain |
| IPR030458 | Glyco_hydro_31_AS | Active_site |
| IPR030459 | Glyco_hydro_31_CS | Conserved_site |
| IPR048395 | Glyco_hydro_31_C | Domain |
Pfam: PF01055, PF13802, PF21365
Enzyme classification (BRENDA):
- EC 3.2.1.207 — mannosyl-oligosaccharide alpha-1,3-glucosidase (BRENDA: 26 organisms, 73 substrates, 66 inhibitors, 27 Km, 5 kcat entries)
Substrate kinetics (BRENDA)
14 substrates with measured Km, best-characterized 14. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| MALTOSE | 0.43–57.7 | 4 |
| P-NITROPHENYL ALPHA-D-GLUCOPYRANOSIDE | 0.78–481 | 4 |
| 4-NITROPHENYL ALPHA-D-GLUCOPYRANOSIDE | 2.2–2.82 | 3 |
| P-NITROPHENYL-ALPHA-D-GLUCOPYRANOSIDE | 0.5–0.92 | 3 |
| 4-METHYLUMBELLIFERYL ALPHA-D-GLUCOPYRANOSIDE | 0.013–0.019 | 2 |
| 4-METHYLUMBELLIFERYL-ALPHA-D-GLUCOPYRANOSIDE | 0.0003 | 1 |
| 4-METHYLUMBELLIFERYL-ALPHA-D-GLUCOSIDE | 0.0552 | 1 |
| 4-METHYLUMBELLYFERYL ALPHA-D-GLUCOPYRANOSIDE | 0.055 | 1 |
| MALTOHEXAOSE | 15.3 | 1 |
| MALTOTRIOSE | 26.7 | 1 |
| N-[[2-CARBOXY-5-(4-METHOXYPHENYL)THIOPHEN-3-YL]C | 0.49 | 1 |
| NIGEROSE | 2.13 | 1 |
| P-NITROPHENYL-2-DEOXY-ALPHA-D-GLUCOPYRANOSIDE | 0.76 | 1 |
| SUCROSE | 15.3 | 1 |
Catalyzed reactions (Rhea), 2 shown:
- N(4)-(alpha-D-Glc-(1->3)-alpha-D-Glc-(1->3)-alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->2)-alpha-D-Man-(1->6)]-alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-beta-D-GlcNAc)-L-asparaginyl-[protein] + H2O = N(4)-(alpha-D-Glc-(1->3)-alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->2)-alpha-D-Man-(1->6)]-alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-beta-D-GlcNAc)-L-asparaginyl-[protein] + beta-D-glucose (RHEA:55996)
- N(4)-(alpha-D-Glc-(1->3)-alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->2)-alpha-D-Man-(1->6)]-alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-beta-D-GlcNAc)-L-asparaginyl-[protein] + H2O = N(4)-(alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->2)-alpha-D-Man-(1->6)]-alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-beta-D-GlcNAc)-L-asparaginyl-[protein] (N-glucan mannose isomer 9A1,2,3B1,2,3) + beta-D-glucose (RHEA:56000)
UniProt features (125 total): strand 54, helix 23, sequence variant 15, turn 13, binding site 4, splice variant 3, disulfide bond 2, sequence conflict 2, active site 2, signal peptide 1, chain 1, modified residue 1, glycosylation site 1, region of interest 1, compositionally biased region 1, mutagenesis site 1
Structure
Experimental structures (PDB)
2 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 8D43 | ELECTRON MICROSCOPY | 2.88 |
| 8EMR | ELECTRON MICROSCOPY | 2.92 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q14697-F1 | 93.43 | 0.90 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (2): 542 (nucleophile); 618 (proton donor)
Ligand- & substrate-binding residues (4): 283; 429; 602; 676
Post-translational modifications (1): 52
Disulfide bonds (2): 41–47, 633–644
Glycosylation sites (1): 97
Mutagenesis-validated functional residues (1):
| Position | Phenotype |
|---|---|
| 542 | loss of activity. |
Function
Pathways and Gene Ontology
Reactome pathways
5 pathways
| ID | Pathway |
|---|---|
| R-HSA-532668 | N-glycan trimming in the ER and Calnexin/Calreticulin cycle |
| R-HSA-901042 | Calnexin/calreticulin cycle |
| R-HSA-9683686 | Maturation of spike protein |
| R-HSA-9694548 | Maturation of spike protein |
| R-HSA-9768727 | Regulation of CDH1 posttranslational processing and trafficking to plasma membrane |
MSigDB gene sets: 266 (showing top):
GSE45365_NK_CELL_VS_CD8A_DC_UP, GGGACCA_MIR133A_MIR133B, GOBP_N_GLYCAN_PROCESSING, GOBP_PROTEIN_N_LINKED_GLYCOSYLATION, CGGAARNGGCNG_UNKNOWN, MORF_UBE2I, KEGG_N_GLYCAN_BIOSYNTHESIS, MORF_HDAC1, GOBP_CARBOHYDRATE_DERIVATIVE_METABOLIC_PROCESS, REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS, TCGATGG_MIR213, OSWALD_HEMATOPOIETIC_STEM_CELL_IN_COLLAGEN_GEL_UP, WANG_LMO4_TARGETS_DN, MORF_CTBP1, GOBP_CARBOHYDRATE_DERIVATIVE_BIOSYNTHETIC_PROCESS
GO Biological Process (2): carbohydrate metabolic process (GO:0005975), N-glycan processing (GO:0006491)
GO Molecular Function (10): RNA binding (GO:0003723), carbohydrate binding (GO:0030246), glucan 1,3-alpha-glucosidase activity (GO:0033919), alpha-glucosidase activity (GO:0090599), Glc2Man9GlcNAc2 oligosaccharide glucosidase activity (GO:0106407), catalytic activity (GO:0003824), hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), protein binding (GO:0005515), hydrolase activity (GO:0016787), hydrolase activity, acting on glycosyl bonds (GO:0016798)
GO Cellular Component (8): endoplasmic reticulum (GO:0005783), endoplasmic reticulum lumen (GO:0005788), Golgi apparatus (GO:0005794), membrane (GO:0016020), glucosidase II complex (GO:0017177), melanosome (GO:0042470), intracellular membrane-bounded organelle (GO:0043231), extracellular exosome (GO:0070062)
Reactome top-level categories
Rollup of top-5 pathways:
| Category | Pathways |
|---|---|
| Asparagine N-linked glycosylation | 1 |
| N-glycan trimming in the ER and Calnexin/Calreticulin cycle | 1 |
| Translation of Structural Proteins | 1 |
| Regulation of CDH1 Expression and Function | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| binding | 2 |
| alpha-glucosidase activity | 2 |
| cytoplasm | 2 |
| endomembrane system | 2 |
| intracellular membrane-bounded organelle | 2 |
| primary metabolic process | 1 |
| protein N-linked glycosylation | 1 |
| glycoprotein biosynthetic process | 1 |
| nucleic acid binding | 1 |
| glucosidase activity | 1 |
| molecular_function | 1 |
| hydrolase activity, acting on glycosyl bonds | 1 |
| catalytic activity | 1 |
| hydrolase activity | 1 |
| endoplasmic reticulum | 1 |
| intracellular organelle lumen | 1 |
| cellular anatomical structure | 1 |
| endoplasmic reticulum protein-containing complex | 1 |
| glucosidase complex | 1 |
| pigment granule | 1 |
| intracellular anatomical structure | 1 |
| membrane-bounded organelle | 1 |
| intracellular organelle | 1 |
| extracellular vesicle | 1 |
Protein interactions and networks
STRING
3104 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| GANAB | MOGS | Q13724 | 968 |
| GANAB | PRKCSH | P14314 | 934 |
| GANAB | ALG8 | Q9BVK2 | 805 |
| GANAB | DNAJB11 | Q9UBS4 | 768 |
| GANAB | HYOU1 | Q9Y4L1 | 755 |
| GANAB | HSPA5 | P11021 | 712 |
| GANAB | PDIA3 | P30101 | 700 |
| GANAB | UGGT1 | Q9NYU2 | 690 |
| GANAB | SEC63 | Q9UGP8 | 651 |
| GANAB | SEC61B | P38390 | 649 |
| GANAB | HSP90B1 | P14625 | 649 |
| GANAB | CALR | P27797 | 635 |
| GANAB | PLA2G2A | P14555 | 621 |
| GANAB | PKD1 | P98161 | 613 |
| GANAB | PLA2G2D | Q9UNK4 | 610 |
IntAct
196 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| HSPA8 | GAK | psi-mi:“MI:0914”(association) | 0.760 |
| CFTR | ESYT2 | psi-mi:“MI:0914”(association) | 0.710 |
| CFTR | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.710 |
| NCBP2 | KPNA3 | psi-mi:“MI:0914”(association) | 0.640 |
| CRIPTO | AIP | psi-mi:“MI:0914”(association) | 0.640 |
| CFTR | HAX1 | psi-mi:“MI:0914”(association) | 0.610 |
| IGF1R | PIK3R2 | psi-mi:“MI:2364”(proximity) | 0.590 |
| ADAMTS4 | MANBA | psi-mi:“MI:0914”(association) | 0.530 |
| NPTN | TNPO2 | psi-mi:“MI:0914”(association) | 0.530 |
| COL1A1 | GOLIM4 | psi-mi:“MI:0914”(association) | 0.500 |
| CFTR | PLEKHG3 | psi-mi:“MI:0914”(association) | 0.480 |
| sseJ | AGPS | psi-mi:“MI:0914”(association) | 0.460 |
| env | PSMD11 | psi-mi:“MI:0914”(association) | 0.460 |
| env | APP | psi-mi:“MI:0914”(association) | 0.460 |
| env | PGRMC1 | psi-mi:“MI:0914”(association) | 0.460 |
| Zwint | NDC80 | psi-mi:“MI:0915”(physical association) | 0.400 |
| TK2 | psi-mi:“MI:0915”(physical association) | 0.400 |
BioGRID (517): GANAB (Affinity Capture-MS), GANAB (Affinity Capture-MS), GANAB (Affinity Capture-MS), GANAB (Affinity Capture-MS), MOGS (Co-fractionation), MRPL9 (Co-fractionation), UQCRC2 (Co-fractionation), GANAB (Affinity Capture-MS), GANAB (Proximity Label-MS), GANAB (Proximity Label-MS), GANAB (Proximity Label-MS), GANAB (Proximity Label-MS), GANAB (Affinity Capture-MS), GANAB (Affinity Capture-MS), GANAB (Affinity Capture-MS)
ESM2 similar proteins: A0JNU3, A6QNR0, O18835, O35632, O77695, O88202, O97524, P04066, P06760, P06865, P07686, P08236, P10253, P12265, P16444, P17164, P22412, P29416, P31429, P31430, P43477, P48300, P54802, P70699, P79403, Q0V8R6, Q12891, Q14697, Q3SZM7, Q3U4H6, Q4FAT7, Q4QR99, Q4R4N7, Q5R5N6, Q5R7A9, Q5RC84, Q5RFI5, Q60HF8, Q641X3, Q6AYS4
Diamond homologs: B9F676, D0KQM8, F4J6T7, O04893, O04931, O43451, P07768, P0CD66, P10253, P14410, P23739, P38138, P70699, P79403, Q12558, Q14697, Q43763, Q4R4N7, Q5R7A9, Q653V7, Q6P7A9, Q8BHN3, Q8BVW0, Q8TET4, Q92442, Q94502, Q9BE70, Q9F234, Q9FN05, Q9MYM4, Q9US55, Q09901, Q9P999, A1CNK4, A1D1E6, B0XNL6, B8MZ41, D4B0X3, O00906, O62653
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
631 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 18 |
| Likely pathogenic | 33 |
| Uncertain significance | 294 |
| Likely benign | 170 |
| Benign | 32 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1711179 | NM_198334.3(GANAB):c.2516C>T (p.Thr839Ile) | Pathogenic |
| 2050292 | NM_198334.3(GANAB):c.499_500del (p.Leu167fs) | Pathogenic |
| 253129 | NM_198334.3(GANAB):c.1848_1849del (p.Asp618fs) | Pathogenic |
| 253130 | NM_198334.3(GANAB):c.1148C>G (p.Thr383Arg) | Pathogenic |
| 253131 | NM_198334.3(GANAB):c.2624+2_2624+7del | Pathogenic |
| 2691267 | NM_198334.3(GANAB):c.1936+1del | Pathogenic |
| 2700204 | NM_198334.3(GANAB):c.2280_2281del (p.Gly761fs) | Pathogenic |
| 2783444 | NM_198334.3(GANAB):c.755del (p.Gly252fs) | Pathogenic |
| 3236796 | NM_198334.3(GANAB):c.1310_1320del (p.Arg437fs) | Pathogenic |
| 3254987 | NM_198334.3(GANAB):c.1495G>T (p.Glu499Ter) | Pathogenic |
| 492969 | NM_198334.3(GANAB):c.2725+4_2725+12del | Pathogenic |
| 590347 | NM_198334.3(GANAB):c.11_16del (p.Val4_Ala5del) | Pathogenic |
| 590348 | NM_198334.3(GANAB):c.621del (p.Asp207fs) | Pathogenic |
| 590349 | NM_198334.3(GANAB):c.1769G>C (p.Arg590Pro) | Pathogenic |
| 590350 | NM_198334.3(GANAB):c.1936+1G>C | Pathogenic |
| 590352 | NM_198334.3(GANAB):c.2590C>T (p.Arg864Ter) | Pathogenic |
| 620175 | NM_198334.3(GANAB):c.181C>T (p.Arg61Ter) | Pathogenic |
| 810838 | NC_000011.10:g.62628412_62655064del | Pathogenic |
| 1691315 | NM_198334.3(GANAB):c.560+444A>C | Likely pathogenic |
| 1803160 | NM_198334.3(GANAB):c.1429T>C (p.Tyr477His) | Likely pathogenic |
| 2505230 | NM_198334.3(GANAB):c.517C>T (p.Arg173Ter) | Likely pathogenic |
| 253132 | NM_198334.3(GANAB):c.2449C>T (p.Arg817Trp) | Likely pathogenic |
| 2572928 | NM_198334.3(GANAB):c.2110C>T (p.Arg704Ter) | Likely pathogenic |
| 2575050 | NM_198334.3(GANAB):c.677G>A (p.Trp226Ter) | Likely pathogenic |
| 2575052 | NM_198334.3(GANAB):c.644_645del (p.Gln215fs) | Likely pathogenic |
| 3057233 | NM_198334.3(GANAB):c.1502G>A (p.Trp501Ter) | Likely pathogenic |
| 3068388 | NM_198334.3(GANAB):c.12_38+2del | Likely pathogenic |
| 3236803 | NM_198334.3(GANAB):c.174_175del (p.Pro59fs) | Likely pathogenic |
| 3256692 | NM_198334.3(GANAB):c.842dup (p.Asn281fs) | Likely pathogenic |
| 3599837 | NM_198334.3(GANAB):c.2496_2502del (p.Ser835fs) | Likely pathogenic |
SpliceAI
3336 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 11:62625922:ATCC:A | acceptor_loss | 1.0000 |
| 11:62625923:TC:T | acceptor_gain | 1.0000 |
| 11:62625924:CC:C | acceptor_gain | 1.0000 |
| 11:62625925:C:CC | acceptor_gain | 1.0000 |
| 11:62626061:TCAC:T | donor_loss | 1.0000 |
| 11:62626062:CACC:C | donor_loss | 1.0000 |
| 11:62626063:A:AC | donor_gain | 1.0000 |
| 11:62626063:AC:A | donor_gain | 1.0000 |
| 11:62626063:ACCT:A | donor_loss | 1.0000 |
| 11:62626064:C:CA | donor_loss | 1.0000 |
| 11:62626064:C:CC | donor_gain | 1.0000 |
| 11:62626064:CC:C | donor_gain | 1.0000 |
| 11:62626064:CCT:C | donor_gain | 1.0000 |
| 11:62626064:CCTT:C | donor_gain | 1.0000 |
| 11:62626161:CTGAG:C | acceptor_gain | 1.0000 |
| 11:62626162:TGAG:T | acceptor_gain | 1.0000 |
| 11:62626163:GAG:G | acceptor_gain | 1.0000 |
| 11:62626164:AG:A | acceptor_gain | 1.0000 |
| 11:62626166:C:CC | acceptor_gain | 1.0000 |
| 11:62626172:A:AC | acceptor_gain | 1.0000 |
| 11:62626172:A:C | acceptor_gain | 1.0000 |
| 11:62626175:G:C | acceptor_gain | 1.0000 |
| 11:62626175:G:GC | acceptor_gain | 1.0000 |
| 11:62626182:C:CT | acceptor_gain | 1.0000 |
| 11:62626190:C:CT | acceptor_gain | 1.0000 |
| 11:62626193:C:CT | acceptor_gain | 1.0000 |
| 11:62626194:A:T | acceptor_gain | 1.0000 |
| 11:62626329:CATTA:C | donor_loss | 1.0000 |
| 11:62626331:TTA:T | donor_loss | 1.0000 |
| 11:62626332:TA:T | donor_loss | 1.0000 |
AlphaMissense
6149 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 11:62628996:G:C | F651L | 1.000 |
| 11:62628996:G:T | F651L | 1.000 |
| 11:62628998:A:G | F651L | 1.000 |
| 11:62629277:T:A | D618V | 1.000 |
| 11:62629277:T:G | D618A | 1.000 |
| 11:62629287:A:G | W615R | 1.000 |
| 11:62629287:A:T | W615R | 1.000 |
| 11:62628923:G:C | H676D | 0.999 |
| 11:62629277:T:C | D618G | 0.999 |
| 11:62629278:C:G | D618H | 0.999 |
| 11:62629285:C:A | W615C | 0.999 |
| 11:62629285:C:G | W615C | 0.999 |
| 11:62629617:C:A | R602M | 0.999 |
| 11:62629904:G:C | F549L | 0.999 |
| 11:62629904:G:T | F549L | 0.999 |
| 11:62629906:A:G | F549L | 0.999 |
| 11:62629926:T:A | D542V | 0.999 |
| 11:62629933:A:G | W540R | 0.999 |
| 11:62629933:A:T | W540R | 0.999 |
| 11:62630383:C:A | W503C | 0.999 |
| 11:62630383:C:G | W503C | 0.999 |
| 11:62630385:A:G | W503R | 0.999 |
| 11:62630385:A:T | W503R | 0.999 |
| 11:62630701:T:A | D429V | 0.999 |
| 11:62630786:A:G | W401R | 0.999 |
| 11:62630786:A:T | W401R | 0.999 |
| 11:62631117:A:G | W355R | 0.999 |
| 11:62631117:A:T | W355R | 0.999 |
| 11:62632713:T:A | D283V | 0.999 |
| 11:62628997:A:G | F651S | 0.998 |
dbSNP variants (sampled 300 via entrez): RS1000012695 (11:62635200 T>A), RS1000088195 (11:62642367 T>G), RS1000153104 (11:62627631 C>T), RS1000221761 (11:62637981 T>C), RS1000344692 (11:62632182 C>T), RS1000686133 (11:62643445 C>A,G), RS1000728814 (11:62643651 T>C), RS1000777541 (11:62631877 C>A), RS1000918508 (11:62643916 C>G), RS1000928320 (11:62633629 G>A,T), RS1000972057 (11:62643639 C>T), RS1001063199 (11:62638630 G>A), RS1001191042 (11:62637850 C>G), RS1001353340 (11:62626813 G>C,T), RS1001548701 (11:62632265 C>T)
Disease associations
OMIM: gene MIM:104160 | disease phenotypes: MIM:600666, MIM:174050, MIM:620369
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| polycystic kidney disease 3 with or without polycystic liver disease | Definitive | Autosomal dominant |
| autosomal dominant polycystic kidney disease | Supportive | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| polycystic kidney disease 3 with or without polycystic liver disease | Definitive | AD |
Mondo (7): polycystic kidney disease 3 with or without polycystic liver disease (MONDO:0010916), autosomal dominant polycystic liver disease (MONDO:0000447), cystic kidney disease (MONDO:0002473), biliary tract disorder (MONDO:0004868), congenital myopathy 22B, severe fetal (MONDO:0957265), autosomal dominant polycystic kidney disease (MONDO:0004691), chronic kidney disease (MONDO:0005300)
Orphanet (2): Isolated polycystic liver disease (Orphanet:2924), Autosomal dominant polycystic kidney disease (Orphanet:730)
HPO phenotypes
33 total (30 of 33 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000010 | Recurrent urinary tract infections |
| HP:0000083 | Renal insufficiency |
| HP:0000105 | Enlarged kidney |
| HP:0000107 | Renal cyst |
| HP:0000113 | Polycystic kidney dysplasia |
| HP:0000790 | Hematuria |
| HP:0000791 | Uric acid nephrolithiasis |
| HP:0000822 | Hypertension |
| HP:0001407 | Hepatic cysts |
| HP:0001410 | Decreased liver function |
| HP:0001634 | Mitral valve prolapse |
| HP:0001737 | Pancreatic cysts |
| HP:0002616 | Aortic root aneurysm |
| HP:0003259 | Elevated circulating creatinine concentration |
| HP:0003584 | Late onset |
| HP:0003596 | Middle age onset |
| HP:0003621 | Juvenile onset |
| HP:0003774 | Stage 5 chronic kidney disease |
| HP:0004944 | Dilatation of the cerebral artery |
| HP:0006557 | Polycystic liver disease |
| HP:0008672 | Calcium oxalate nephrolithiasis |
| HP:0011004 | Abnormal systemic arterial morphology |
| HP:0011462 | Young adult onset |
| HP:0011760 | Pituitary growth hormone cell adenoma |
| HP:0012207 | Reduced sperm motility |
| HP:0012213 | Decreased glomerular filtration rate |
| HP:0012330 | Pyelonephritis |
| HP:0012591 | Abnormal urinary electrolyte concentration |
| HP:0012592 | Albuminuria |
GWAS associations
9 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST005956_12 | Waist-to-hip ratio adjusted for BMI | 2.000000e-06 |
| GCST005956_2 | Waist-to-hip ratio adjusted for BMI | 1.000000e-08 |
| GCST005962_37 | Waist-to-hip ratio adjusted for BMI x sex x age interaction (4df test) | 5.000000e-07 |
| GCST005962_51 | Waist-to-hip ratio adjusted for BMI x sex x age interaction (4df test) | 1.000000e-07 |
| GCST90020024_382 | A body shape index | 2.000000e-11 |
| GCST90020025_947 | Waist-to-hip ratio adjusted for BMI | 1.000000e-16 |
| GCST90020026_778 | Hip index | 5.000000e-08 |
| GCST90020027_1466 | Waist-hip index | 4.000000e-17 |
| GCST90020029_314 | Waist circumference adjusted for body mass index | 2.000000e-10 |
EFO canonical traits (5, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0007788 | BMI-adjusted waist-hip ratio |
| EFO:0008007 | age at assessment |
| EFO:0008343 | sex interaction measurement |
| EFO:0007789 | BMI-adjusted waist circumference |
| EFO:0008039 | BMI-adjusted hip circumference |
MeSH disease descriptors (4)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D001660 | Biliary Tract Diseases | C06.130 |
| D052177 | Kidney Diseases, Cystic | C12.050.351.968.419.403; C12.200.777.419.403; C12.950.419.403 |
| D007676 | Kidney Failure, Chronic | C12.050.351.968.419.780.750.500; C12.200.777.419.780.750.500; C12.950.419.780.750.500; C23.550.291.500.906.500 |
| D016891 | Polycystic Kidney, Autosomal Dominant | C12.050.351.968.419.403.875.500; C12.200.777.419.403.875.500; C12.950.419.403.875.500; C16.131.077.717.500; C16.320.184.625.500 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL2519 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 4,739 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL307429 | DUVOGLUSTAT | 2 | 4,739 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
10 potent at pChembl≥5 of 21 total, top 10 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.85 | Ki | 14 | nM | DUVOGLUSTAT |
| 7.82 | Ki | 15 | nM | CHEMBL421040 |
| 7.39 | Kd | 40.23 | nM | CHEMBL5653589 |
| 7.39 | ED50 | 40.23 | nM | CHEMBL5653589 |
| 6.80 | Ki | 160 | nM | DUVOGLUSTAT |
| 5.89 | IC50 | 1300 | nM | DUVOGLUSTAT |
| 5.52 | Ki | 3000 | nM | CHEMBL108656 |
| 5.39 | Kd | 4094 | nM | CHEMBL3752910 |
| 5.39 | ED50 | 4094 | nM | CHEMBL3752910 |
| 5.10 | Ki | 8000 | nM | CHEMBL111326 |
PubChem BioAssay actives
3 with measured affinity, of 70 total; 3 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2148412: Binding affinity to human GANAB incubated for 45 mins by Kinobead based pull down assay | kd | 0.0402 | uM |
| (2R,3R,4R,5S)-2-(hydroxymethyl)piperidine-3,4,5-triol | 37439: Tested for competitive inhibition of endoplasmic reticulum alpha-glucosidase II. | ic50 | 1.3000 | uM |
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2148412: Binding affinity to human GANAB incubated for 45 mins by Kinobead based pull down assay | kd | 4.0937 | uM |
CTD chemical–gene interactions
58 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | decreases expression, increases expression | 2 |
| methacrylaldehyde | affects cotreatment, increases oxidation, increases abundance | 2 |
| Acrolein | affects cotreatment, increases oxidation, increases abundance | 2 |
| Benzo(a)pyrene | affects methylation | 2 |
| Ozone | affects cotreatment, increases oxidation, increases abundance | 2 |
| Valproic Acid | affects cotreatment, increases expression, decreases expression | 2 |
| Cadmium Chloride | decreases expression, increases abundance, increases expression | 2 |
| bisphenol F | increases expression | 1 |
| alpha-pinene | affects cotreatment, increases oxidation, increases abundance | 1 |
| deoxynivalenol | decreases expression | 1 |
| pyrogallol 1,3-dimethyl ether | affects cotreatment, affects localization, decreases expression | 1 |
| tetrahydropalmatine | decreases expression | 1 |
| sodium arsenite | decreases expression | 1 |
| cobaltous chloride | decreases expression | 1 |
| benzo(e)pyrene | increases methylation | 1 |
| 2,3-bis(3’-hydroxybenzyl)butyrolactone | affects cotreatment, increases expression | 1 |
| aflatoxin B2 | increases methylation | 1 |
| epigallocatechin gallate | decreases expression | 1 |
| perfluorooctane sulfonic acid | increases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| ICG 001 | increases expression | 1 |
| bisphenol B | increases expression | 1 |
| bisphenol S | increases expression | 1 |
| LDN 193189 | affects cotreatment, increases expression | 1 |
| bisphenol AF | increases expression | 1 |
| 4-(4-((5-(4,5-dimethyl-2-nitrophenyl)-2-furanyl)methylene)-4,5-dihydro-3-methyl-5-oxo-1H-pyrazol-1-yl)benzoic acid | increases expression | 1 |
| Bortezomib | decreases expression | 1 |
| Arsenic Trioxide | increases expression | 1 |
| Air Pollutants | affects cotreatment, increases abundance, increases oxidation | 1 |
| Atrazine | increases expression | 1 |
ChEMBL screening assays
38 unique, capped per target: 32 binding, 6 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1685139 | Binding | Inhibition of endoplasmic reticulum alpha-glucosidase 2 in human HL-60 cells assessed as free oligosaccharide level at 50 uM after 24 hrs | Synthesis of N-alkylated noeurostegines and evaluation of their potential as treatment for Gaucher’s disease. — Bioorg Med Chem Lett |
| CHEMBL818494 | Functional | Competitive Inhibition constant on rice alpha Mannosidase; MI=Moderate Inhibition | Synthesis and biological activity of C-6 modified derivatives of the glucosidase inhibitor 1-deoxynojirimycin. — Bioorg Med Chem Lett |
Cellosaurus cell lines
5 cell lines: 5 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_D1MQ | Abcam K-562 GANAB KO | Cancer cell line | Female |
| CVCL_D2JA | Abcam Raji GANAB KO | Cancer cell line | Male |
| CVCL_SP54 | HAP1 GANAB (-) 1 | Cancer cell line | Male |
| CVCL_SP55 | HAP1 GANAB (-) 2 | Cancer cell line | Male |
| CVCL_UQ57 | Abcam Jurkat GANAB KO | Cancer cell line | Male |
Clinical trials (associated diseases)
135 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00414440 | PHASE4 | COMPLETED | Efficacy, Safety and Tolerability of Everolimus in Preventing End-stage Renal Disease in Patients With Autosomal Dominant Polycystic Kidney Disease |
| NCT03273413 | PHASE4 | ACTIVE_NOT_RECRUITING | Statin Therapy in Patients With Early Stage ADPKD |
| NCT03949894 | PHASE4 | COMPLETED | Evaluating the Safety and effectivenesS in Adult KorEaN Patients Treated With Tolvaptan for Management of Autosomal domInAnt poLycystic Kidney Disease |
| NCT00309283 | PHASE3 | COMPLETED | Somatostatin in Polycystic Kidney: a Long-term Three Year Follow up Study |
| NCT00346918 | PHASE3 | COMPLETED | Sirolimus (Rapamune®) for Autosomal Dominant Polycystic Kidney Disease (ADPKD) |
| NCT00428948 | PHASE3 | COMPLETED | Tolvaptan Phase 3 Efficacy and Safety Study in Autosomal Dominant Polycystic Kidney Disease (ADPKD) |
| NCT01022424 | PHASE3 | COMPLETED | A Long-term Administration Study of OPC-41061 in Patients With Autosomal Dominant Polycystic Kidney Disease (ADPKD) (2) [Extension of Study 156-05-002] |
| NCT01214421 | PHASE3 | COMPLETED | Tolvaptan Extension Study in Participants With ADPKD |
| NCT01377246 | PHASE3 | COMPLETED | Somatostatin In Patients With Autosomal Dominant Polycystic Kidney Disease And Moderate To Severe Renal Insufficiency |
| NCT01616927 | PHASE3 | UNKNOWN | Study of Lanreotide to Treat Polycystic Kidney Disease |
| NCT01853553 | PHASE3 | COMPLETED | Mineralocorticoid Antagonism and Endothelial Dysfunction in Autosomal Dominant Polycystic Kidney Disease (ADPKD) |
| NCT02115659 | PHASE3 | UNKNOWN | Triptolide-Containing Formulation as Treatment for Autosomal Dominant Polycystic Kidney Disease (ADPKD) |
| NCT02134899 | PHASE3 | COMPLETED | The Efficacy of Everolimus in Reducing Total Native Kidney Volume in Polycystic Kidney Disease Transplanted Recipients |
| NCT02160145 | PHASE3 | COMPLETED | Efficacy and Safety of Tolvaptan in Subjects With Chronic Kidney Disease Between Late Stage 2 to Early Stage 4 Due to Autosomal Dominant Polycystic Kidney Disease |
| NCT02964273 | PHASE3 | COMPLETED | Safety, Pharmacokinetics, Tolerability and Efficacy of Tolvaptan in Children and Adolescents With ADPKD (Autosomal Dominant Polycystic Kidney Disease) |
| NCT03764605 | PHASE3 | UNKNOWN | Metformin vs Tolvaptan for Treatment of Autosomal Dominant Polycystic Kidney Disease |
| NCT03918447 | PHASE3 | TERMINATED | A Trial of Bardoxolone Methyl in Patients With ADPKD - FALCON |
| NCT04064346 | PHASE3 | TERMINATED | Efficacy and Safety of Lixivaptan in the Treatment of Autosomal Dominant Polycystic Kidney Disease |
| NCT04152837 | PHASE3 | TERMINATED | Safety of Lixivaptan in Subjects Previously Treated With Tolvaptan for Autosomal Dominant Polycystic Kidney Disease |
| NCT04939935 | PHASE3 | RECRUITING | Implementation of Metformin theraPy to Ease Decline of Kidney Function in Polycystic Kidney Disease (IMPEDE-PKD) |
| NCT05373264 | PHASE3 | RECRUITING | HYDROchlorothiazide to PROTECT Polycystic Kidney Disease Patients and Improve Their Quality of Life |
| NCT04705051 | PHASE3 | TERMINATED | Long-term Treatment of Autosomal Dominant Polycystic Kidney Disease (ADPKD) With Venglustat |
| NCT00841568 | PHASE2 | COMPLETED | A Long-term Administration Study of OPC-41061 in Patients With Autosomal Dominant Polycystic Kidney Disease (ADPKD) [Extension of Study 156-04-001] |
| NCT01210560 | PHASE2 | COMPLETED | Dose-finding Study of New Tolvaptan Formulation in Subjects With ADPKD |
| NCT01336972 | PHASE2 | COMPLETED | Short-term Renal Hemodynamic Effects of Tolvaptan in Subjects With Autosomal Dominant Polycystic Kidney Disease (ADPKD) |
| NCT01451827 | PHASE2 | COMPLETED | 8-Week Study of Tolvaptan Dose Forms in Autosomal Dominant Polycystic Kidney Disease (ADPKD) |
| NCT01670110 | PHASE2 | COMPLETED | Pasireotide LAR in Severe Polycystic Liver Disease |
| NCT01932450 | PHASE2 | UNKNOWN | Radiofrequency Ablation for ADPKD Blood Pressure and Disease Progression Control |
| NCT02527863 | PHASE2 | COMPLETED | Effect of the Aquaretic Tolvaptan on Nitric Oxide System |
| NCT02616055 | PHASE2 | TERMINATED | Long-Term Treatment and Follow up of Subjects Completing 24 Months of Treatment With Tesevatinib on Study KD019-101 |
| NCT03203642 | PHASE2 | COMPLETED | Study of the Efficacy and Safety of Tesevatinib in Subjects With ADPKD |
| NCT03487913 | PHASE2 | COMPLETED | The ELiSA Study - Evaluation of Lixivaptan in Subjects With Autosomal Dominant Polycystic Kidney Disease |
| NCT03541447 | PHASE2 | COMPLETED | Tolvaptan-Octreotide LAR Combination in ADPKD |
| NCT04284657 | PHASE2 | COMPLETED | Pravastatin and Alkali Therapy in Patients With Autosomal Dominant Polycystic Kidney Disease |
| NCT04578548 | PHASE2 | TERMINATED | A Study to Evaluate the Effects of GLPG2737 in Participants With Autosomal Dominant Polycystic Kidney Disease (ADPKD) |
| NCT05190744 | PHASE2 | COMPLETED | Probenecid (PB) to Treat Hereditary Nephrogenic Diabetes Insipidus (NDI), ADPKD Treated With Tolvaptan, and Severely Polyuric Patients With Previous Lithium Administration |
| NCT05870007 | PHASE2 | ENROLLING_BY_INVITATION | Atorvastatin and Alkali Therapy in Patients With Autosomal Dominant Polycystic Kidney Disease |
| NCT06100133 | PHASE2 | UNKNOWN | Treat Autosomal Dominant Polycystic Kidney Disease With Oral Ketone Ester? |
| NCT06289998 | PHASE2 | ACTIVE_NOT_RECRUITING | Study of Tamibarotene in Patients With ADPKD |
| NCT06435858 | PHASE2 | RECRUITING | Short-term Effects of an SGLT2 Inhibitor on Divalent Ions in Autosomal Dominant Polycystic Kidney Disease |
Related Atlas pages
- Associated diseases: polycystic kidney disease 3 with or without polycystic liver disease, autosomal dominant polycystic kidney disease
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): autosomal dominant polycystic kidney disease, autosomal dominant polycystic liver disease, biliary tract disorder, congenital myopathy 22B, severe fetal, cystic kidney disease, polycystic kidney disease 3 with or without polycystic liver disease