GATA6-AS2

Summary

GATA6-AS2 (GATA6 antisense RNA 2, HGNC:58686) is a long non-coding RNA gene on chromosome 18q11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58686
Approved symbol	GATA6-AS2
Name	GATA6 antisense RNA 2
Location	18q11.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP11-627G18.1
Ensembl gene	ENSG00000266283
Ensembl biotype	lncRNA
Entrez	142876910

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000583442, ENST00000822675

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000583442 — 2 exons

Exon	Start	End
ENSE00002703749	22200619	22200976
ENSE00002734446	22204818	22205229

Expression profiles

Bgee: expression breadth ubiquitous, 112 present calls, max score 87.03.

Top tissues by expression

112 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.03	gold quality
left adrenal gland cortex	UBERON:0035825	76.50	gold quality
left ovary	UBERON:0002119	76.32	gold quality
left adrenal gland	UBERON:0001234	76.28	gold quality
sural nerve	UBERON:0015488	76.23	gold quality
right adrenal gland	UBERON:0001233	75.34	gold quality
ovary	UBERON:0000992	75.06	gold quality
adrenal gland	UBERON:0002369	74.73	gold quality
right ovary	UBERON:0002118	74.48	gold quality
apex of heart	UBERON:0002098	74.38	gold quality
right adrenal gland cortex	UBERON:0035827	74.06	gold quality
left uterine tube	UBERON:0001303	72.94	gold quality
colonic epithelium	UBERON:0000397	70.51	silver quality
stomach	UBERON:0000945	70.51	gold quality
body of stomach	UBERON:0001161	70.51	gold quality
right atrium auricular region	UBERON:0006631	69.41	gold quality
descending thoracic aorta	UBERON:0002345	69.10	gold quality
fundus of stomach	UBERON:0001160	68.94	gold quality
heart	UBERON:0000948	68.24	gold quality
heart left ventricle	UBERON:0002084	67.88	gold quality
left coronary artery	UBERON:0001626	67.49	gold quality
thoracic aorta	UBERON:0001515	67.17	gold quality
ascending aorta	UBERON:0001496	66.91	gold quality
fallopian tube	UBERON:0003889	66.84	gold quality
mucosa of transverse colon	UBERON:0004991	66.80	gold quality
right coronary artery	UBERON:0001625	66.74	gold quality
body of pancreas	UBERON:0001150	66.36	gold quality
stromal cell of endometrium	CL:0002255	65.31	gold quality
duodenum	UBERON:0002114	65.27	gold quality
omental fat pad	UBERON:0010414	65.14	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.75

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.