GATB-AS1

Summary

GATB-AS1 (GATB antisense RNA 1, HGNC:58895) is a long non-coding RNA gene on chromosome 4q31.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58895
Approved symbol	GATB-AS1
Name	GATB antisense RNA 1
Location	4q31.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251455
Ensembl biotype	lncRNA
Entrez	107986197

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000514269

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000514269 — 3 exons

Exon	Start	End
ENSE00002047126	151677539	151677893
ENSE00002059143	151674483	151676560
ENSE00002087015	151677300	151677431

Expression profiles

Bgee: expression breadth ubiquitous, 124 present calls, max score 71.98.

Top tissues by expression

124 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	71.98	gold quality
lower esophagus mucosa	UBERON:0035834	70.47	gold quality
gastrocnemius	UBERON:0001388	65.53	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.13	gold quality
muscle of leg	UBERON:0001383	64.53	gold quality
skeletal muscle tissue	UBERON:0001134	63.36	gold quality
cerebellar hemisphere	UBERON:0002245	61.21	gold quality
cerebellar cortex	UBERON:0002129	61.19	gold quality
right hemisphere of cerebellum	UBERON:0014890	61.13	gold quality
cerebellum	UBERON:0002037	61.08	gold quality
skin of abdomen	UBERON:0001416	60.73	gold quality
zone of skin	UBERON:0000014	60.15	gold quality
skin of leg	UBERON:0001511	59.74	gold quality
mucosa of transverse colon	UBERON:0004991	58.85	gold quality
ganglionic eminence	UBERON:0004023	57.08	silver quality
esophagus mucosa	UBERON:0002469	56.12	gold quality
stromal cell of endometrium	CL:0002255	55.72	gold quality
body of pancreas	UBERON:0001150	55.54	gold quality
endometrium	UBERON:0001295	55.23	gold quality
minor salivary gland	UBERON:0001830	54.69	gold quality
saliva-secreting gland	UBERON:0001044	54.54	gold quality
heart left ventricle	UBERON:0002084	54.45	gold quality
right atrium auricular region	UBERON:0006631	54.45	gold quality
pancreas	UBERON:0001264	53.89	gold quality
superior frontal gyrus	UBERON:0002661	53.63	gold quality
tibial nerve	UBERON:0001323	53.22	gold quality
heart	UBERON:0000948	53.13	gold quality
monocyte	CL:0000576	52.76	silver quality
vagina	UBERON:0000996	52.69	gold quality
transverse colon	UBERON:0001157	52.54	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.29

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.