GCC2-AS1

Summary

GCC2-AS1 (GCC2 antisense RNA 1, HGNC:28126) is a long non-coding RNA gene on chromosome 2q12.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:28126
Approved symbol	GCC2-AS1
Name	GCC2 antisense RNA 1
Location	2q12.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000214184
Ensembl biotype	lncRNA
Entrez	644903
RNAcentral	URS0000A76E29 — lncRNA, 569 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 18 — 18 lncRNA

ENST00000322353, ENST00000440975, ENST00000722733, ENST00000722734, ENST00000722735, ENST00000722736, ENST00000722737, ENST00000722738, ENST00000722739, ENST00000722740, ENST00000722741, ENST00000722742, ENST00000722743, ENST00000722744, ENST00000722745, ENST00000722746, ENST00000722747, ENST00000722748

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000322353 — 3 exons

Exon	Start	End
ENSE00001263602	108511930	108512012
ENSE00004043644	108507502	108507621
ENSE00004043659	108533829	108534196

Expression profiles

Bgee: expression breadth ubiquitous, 157 present calls, max score 86.11.

Top tissues by expression

243 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.11	gold quality
right lobe of liver	UBERON:0001114	79.56	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	78.01	silver quality
stromal cell of endometrium	CL:0002255	70.01	gold quality
ventricular zone	UBERON:0003053	69.84	gold quality
calcaneal tendon	UBERON:0003701	69.40	gold quality
bone marrow cell	CL:0002092	68.02	silver quality
ganglionic eminence	UBERON:0004023	66.40	gold quality
cortical plate	UBERON:0005343	66.08	gold quality
liver	UBERON:0002107	65.95	gold quality
hindlimb stylopod muscle	UBERON:0004252	64.36	gold quality
right ovary	UBERON:0002118	63.35	gold quality
endocervix	UBERON:0000458	63.20	gold quality
islet of Langerhans	UBERON:0000006	62.93	gold quality
leukocyte	CL:0000738	62.81	gold quality
monocyte	CL:0000576	62.79	gold quality
left ovary	UBERON:0002119	62.54	gold quality
tendon	UBERON:0000043	62.34	gold quality
right lung	UBERON:0002167	61.21	gold quality
right adrenal gland cortex	UBERON:0035827	60.99	gold quality
body of uterus	UBERON:0009853	60.67	gold quality
right adrenal gland	UBERON:0001233	60.35	gold quality
granulocyte	CL:0000094	60.02	gold quality
right coronary artery	UBERON:0001625	60.02	gold quality
descending thoracic aorta	UBERON:0002345	59.94	gold quality
adrenal tissue	UBERON:0018303	59.94	gold quality
gall bladder	UBERON:0002110	59.51	gold quality
mucosa of stomach	UBERON:0001199	59.50	gold quality
ovary	UBERON:0000992	59.47	gold quality
left adrenal gland cortex	UBERON:0035825	59.37	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.00

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.