GET3
gene geneOn this page
Also known as ARSA-ITRC40
Summary
GET3 (guided entry of tail-anchored proteins factor 3, ATPase, HGNC:752) is a protein-coding gene on chromosome 19p13.13, encoding ATPase GET3 (O43681). ATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. It is a selective cancer dependency (DepMap: 71.6% of cell lines).
This gene represents the human homolog of the bacterial arsA gene, encoding the arsenite-stimulated ATPase component of the arsenite transporter responsible for resistance to arsenicals. This protein is also a central component of a transmembrane domain (TMD) recognition complex (TRC) that is involved in the post-translational delivery of tail-anchored (TA) proteins from the cytosol to the endoplasmic reticulum (ER). It recognizes and selectively binds the TMD of TA proteins in the cytosol, and delivers them to the ER for insertion.
Source: NCBI Gene 439 — RefSeq curated summary.
At a glance
- Gene–disease (curated): cardiomyopathy, dilated, 2H (Limited, ClinGen) — +1 more curated relationship
- Clinical variants (ClinVar): 42 total — 1 pathogenic
- GTEx eGene: eQTL in 6 tissues, sQTL in 1 (q < 0.05)
- Phenotypes (HPO): 22
- Cancer dependency (DepMap): dependent in 71.6% of screened cell lines
- Constraint (gnomAD): pLI 0.03 (LoF-tolerant), LOEUF 0.73 (unconstrained)
- MANE Select transcript:
NM_004317 - Interaction hub: 1,738 STRING partners (top 10% of genes corpus-wide)
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:752 |
| Approved symbol | GET3 |
| Name | guided entry of tail-anchored proteins factor 3, ATPase |
| Location | 19p13.13 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | ARSA-I, TRC40 |
| Ensembl gene | ENSG00000198356 |
| Ensembl biotype | protein_coding |
| OMIM | 601913 |
| Entrez | 439 |
Gene structure
Transcript identifiers
Ensembl transcripts: 23 — 17 protein_coding, 5 nonsense_mediated_decay, 1 retained_intron
MANE Select: ENST00000357332
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 1, TSL 2: 1, TSL 5: 1
ENST00000357332, ENST00000590633, ENST00000591090, ENST00000904140, ENST00000904141, ENST00000904142, ENST00000935714, ENST00000935715, ENST00000935716, ENST00000935717, ENST00000935718, ENST00000935719, ENST00000935720, ENST00000935721, ENST00000935722, ENST00000973363, ENST00001066119, ENST00001066120, ENST00001066121, ENST00001066125, ENST00001094027, ENST00001094028, ENST00001120267
RefSeq mRNA: 3 — MANE Select: NM_004317
NM_001371488, NM_001371489, NM_004317
CCDS: CCDS32920
Canonical transcript exons
ENST00000357332 — 7 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000681706 | 12747395 | 12747592 |
| ENSE00000681709 | 12747197 | 12747304 |
| ENSE00000681719 | 12745377 | 12745525 |
| ENSE00000836333 | 12747973 | 12748323 |
| ENSE00001425509 | 12737497 | 12737666 |
| ENSE00001505519 | 12745609 | 12745759 |
| ENSE00003684440 | 12738511 | 12738658 |
Expression profiles
Bgee: expression breadth ubiquitous, 283 present calls, max score 96.23.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 34.4239 / max 172.4390, expressed in 1820 samples.
Highest expression (Bgee): monocyte, stromal cell of endometrium, prefrontal cortex, adrenal gland, apex of heart.
Genetic regulation across tissues (GTEx eQTL / sQTL)
GET3 is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 6 tissues and its splicing (sQTL) in 1 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
7 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Ovary | eqtl | 7.5e-04 | -0.68 | 19:12831272:G:T |
| Brain Cerebellar Hemisphere | eqtl | 4.0e-03 | -0.36 | 19:12998987:C:T |
| Skin Sun Exposed Lower leg | eqtl | 7.4e-03 | -0.29 | 19:13206785:CTGG:C |
| Heart Atrial Appendage | eqtl | 2.3e-02 | +0.09 | 19:11771792:A:G |
| Artery Tibial | eqtl | 3.0e-02 | -0.17 | 19:11882535:A:G |
| Cells Cultured fibroblasts | eqtl | 4.5e-02 | +0.22 | 19:13736861:G:A |
| Artery Coronary | sqtl | 4.9e-02 | -0.58 | 19:13432241:C:A |
FANTOM5 promoters
2 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 174009 | 32.6554 | 1817 |
| 174008 | 1.7685 | 1303 |
Top tissues by expression
showing 100 of 294 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| monocyte | CL:0000576 | 96.23 | gold quality |
| stromal cell of endometrium | CL:0002255 | 96.15 | gold quality |
| prefrontal cortex | UBERON:0000451 | 96.11 | gold quality |
| right adrenal gland | UBERON:0001233 | 96.07 | gold quality |
| apex of heart | UBERON:0002098 | 96.04 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 95.92 | gold quality |
| mononuclear cell | CL:0000842 | 95.89 | gold quality |
| leukocyte | CL:0000738 | 95.84 | gold quality |
| right frontal lobe | UBERON:0002810 | 95.84 | gold quality |
| left adrenal gland | UBERON:0001234 | 95.69 | gold quality |
| right testis | UBERON:0004534 | 95.65 | gold quality |
| islet of Langerhans | UBERON:0000006 | 95.60 | gold quality |
| granulocyte | CL:0000094 | 95.56 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 95.49 | gold quality |
| left testis | UBERON:0004533 | 95.46 | gold quality |
| endometrium epithelium | UBERON:0004811 | 95.22 | gold quality |
| cingulate cortex | UBERON:0003027 | 95.08 | gold quality |
| heart left ventricle | UBERON:0002084 | 95.05 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 95.01 | gold quality |
| metanephros cortex | UBERON:0010533 | 94.92 | gold quality |
| skin of leg | UBERON:0001511 | 94.77 | gold quality |
| cardiac ventricle | UBERON:0002082 | 94.76 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 94.76 | gold quality |
| body of stomach | UBERON:0001161 | 94.72 | gold quality |
| cortical plate | UBERON:0005343 | 94.71 | gold quality |
| nucleus accumbens | UBERON:0001882 | 94.67 | gold quality |
| amygdala | UBERON:0001876 | 94.63 | gold quality |
| adrenal cortex | UBERON:0001235 | 94.59 | gold quality |
| caudate nucleus | UBERON:0001873 | 94.55 | gold quality |
| skin of abdomen | UBERON:0001416 | 94.46 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 94.31 | gold quality |
| ganglionic eminence | UBERON:0004023 | 94.30 | gold quality |
| ectocervix | UBERON:0012249 | 94.30 | gold quality |
| adenohypophysis | UBERON:0002196 | 94.27 | gold quality |
| right atrium auricular region | UBERON:0006631 | 94.23 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 94.22 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 94.22 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 94.20 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 94.18 | gold quality |
| left coronary artery | UBERON:0001626 | 94.14 | gold quality |
| gall bladder | UBERON:0002110 | 94.13 | gold quality |
| gastrocnemius | UBERON:0001388 | 94.07 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 94.02 | gold quality |
| endocervix | UBERON:0000458 | 93.96 | gold quality |
| lower esophagus | UBERON:0013473 | 93.89 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 93.89 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 93.83 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 93.83 | gold quality |
| adrenal gland | UBERON:0002369 | 93.82 | gold quality |
| thoracic aorta | UBERON:0001515 | 93.79 | gold quality |
| cerebellar cortex | UBERON:0002129 | 93.79 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 93.77 | gold quality |
| esophagus mucosa | UBERON:0002469 | 93.77 | gold quality |
| mucosa of stomach | UBERON:0001199 | 93.75 | gold quality |
| right coronary artery | UBERON:0001625 | 93.75 | gold quality |
| putamen | UBERON:0001874 | 93.74 | gold quality |
| minor salivary gland | UBERON:0001830 | 93.73 | gold quality |
| muscle of leg | UBERON:0001383 | 93.72 | gold quality |
| ascending aorta | UBERON:0001496 | 93.72 | gold quality |
| ventricular zone | UBERON:0003053 | 93.71 | gold quality |
| esophagus | UBERON:0001043 | 93.70 | gold quality |
| heart | UBERON:0000948 | 93.67 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 93.67 | gold quality |
| popliteal artery | UBERON:0002250 | 93.64 | gold quality |
| tibial artery | UBERON:0007610 | 93.64 | gold quality |
| aorta | UBERON:0000947 | 93.63 | gold quality |
| testis | UBERON:0000473 | 93.60 | gold quality |
| pituitary gland | UBERON:0000007 | 93.59 | gold quality |
| transverse colon | UBERON:0001157 | 93.59 | gold quality |
| left uterine tube | UBERON:0001303 | 93.56 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 93.53 | gold quality |
| omental fat pad | UBERON:0010414 | 93.48 | gold quality |
| peritoneum | UBERON:0002358 | 93.46 | gold quality |
| coronary artery | UBERON:0001621 | 93.44 | gold quality |
| right ovary | UBERON:0002118 | 93.41 | gold quality |
| right uterine tube | UBERON:0001302 | 93.34 | gold quality |
| cardiac atrium | UBERON:0002081 | 93.32 | gold quality |
| body of pancreas | UBERON:0001150 | 93.27 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 93.25 | gold quality |
| hypothalamus | UBERON:0001898 | 93.21 | gold quality |
| body of uterus | UBERON:0009853 | 93.15 | gold quality |
| spinal cord | UBERON:0002240 | 93.03 | gold quality |
| frontal cortex | UBERON:0001870 | 93.02 | gold quality |
| thyroid gland | UBERON:0002046 | 92.96 | gold quality |
| neocortex | UBERON:0001950 | 92.95 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 92.89 | gold quality |
| cerebellum | UBERON:0002037 | 92.78 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 92.76 | gold quality |
| left ovary | UBERON:0002119 | 92.59 | gold quality |
| pancreas | UBERON:0001264 | 92.51 | gold quality |
| mouth mucosa | UBERON:0003729 | 92.44 | gold quality |
| zone of skin | UBERON:0000014 | 92.41 | gold quality |
| stomach | UBERON:0000945 | 92.33 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 92.30 | gold quality |
| forebrain | UBERON:0001890 | 92.27 | gold quality |
| upper lobe of lung | UBERON:0008948 | 92.26 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 92.24 | gold quality |
| telencephalon | UBERON:0001893 | 92.17 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 92.15 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 92.08 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 11.10 |
HPA expression
RNA tissue specificity: Low tissue specificity
showing 60 of 80 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM | Protein (IHC) |
|---|---|---|---|
| Frontal cortex | tissue | 155.7 | |
| Caudate putamen | tissue | 134.2 | |
| Thalamus | tissue | 128.1 | |
| Superior colliculi | tissue | 124.6 | |
| Pons | tissue | 121.1 | |
| Midbrain | tissue | 115.2 | |
| Cerebral cortex | tissue | 103.7 | medium |
| Somatosensory cortex | tissue | 103.7 | |
| Medulla oblongata | tissue | 103.6 | |
| Putamen | tissue | 103.0 | |
| Hippocampal formation | tissue | 102.8 | |
| Occipital cortex | tissue | 99.5 | |
| Substantia nigra | tissue | 98.7 | |
| Spinal cord | tissue | 94.3 | |
| Prefrontal cortex | tissue | 93.6 | |
| Motor cortex | tissue | 93.2 | |
| Basal ganglia | tissue | 92.9 | medium |
| Temporal cortex | tissue | 89.7 | |
| Entorhinal cortex | tissue | 89.0 | |
| Septum | tissue | 88.5 | |
| Hypothalamus | tissue | 88.1 | |
| Periaqueductal gray | tissue | 87.6 | |
| Ventral forebrain | tissue | 86.8 | |
| Retrosplenial and cingulate cortex | tissue | 84.0 | |
| Retrosplenial cortex | tissue | 78.6 | |
| Cerebellum | tissue | 78.2 | high |
| Corpus callosum | tissue | 77.5 | |
| Insular cortex | tissue | 71.8 | |
| Olfactory bulb | tissue | 69.5 | |
| Parathyroid gland | tissue | 68.9 | low |
| Amygdala | tissue | 67.9 | |
| Choroid plexus | tissue | 64.2 | |
| Bone marrow | tissue | 62.5 | low |
| Skeletal muscle | tissue | 61.0 | not detected |
| Heart muscle | tissue | 58.1 | low |
| Tongue | tissue | 54.8 | |
| Thyroid gland | tissue | 52.7 | high |
| Ovary | tissue | 52.6 | high |
| Kidney | tissue | 51.6 | high |
| Postcentral gyrus | tissue | 51.6 | |
| Esophagus | tissue | 49.3 | medium |
| Hippocampus | tissue | 48.8 | medium |
| Pituitary gland | tissue | 48.2 | |
| Nucleus accumbens | tissue | 47.6 | |
| Locus coeruleus | tissue | 47.0 | |
| Pancreas | tissue | 45.4 | medium |
| Lymph node | tissue | 45.2 | medium |
| Adrenal gland | tissue | 44.7 | medium |
| Fallopian tube | tissue | 44.2 | high |
| Skin 1 | tissue | 44.1 | medium |
| Thymus | tissue | 43.7 | |
| Urinary bladder | tissue | 43.3 | high |
| Vagina | tissue | 42.8 | medium |
| Salivary gland | tissue | 41.5 | medium |
| Epididymis | tissue | 38.7 | high |
| Testis | tissue | 37.8 | high |
| Duodenum | tissue | 37.6 | high |
| Appendix | tissue | 37.1 | medium |
| Gallbladder | tissue | 36.8 | medium |
| Tonsil | tissue | 35.7 | high |
Brain sub-regions (HPA Brain Atlas): detected in 192; highest nTPM — Dorsal hippocampus (102.8), Ventral spinal cord (94.3), Ventral hippocampus (91.9), Dorsal spinal cord (88.4), Subiculum (81.5).
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
Targeting GET3 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).
29 miRNAs:
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-574-5P | 100.00 | 66.01 | 989 |
| HSA-MIR-6798-5P | 100.00 | 65.77 | 699 |
| HSA-MIR-19A-3P | 99.98 | 75.33 | 2762 |
| HSA-MIR-19B-3P | 99.98 | 75.44 | 2754 |
| HSA-MIR-6825-5P | 99.96 | 69.81 | 3431 |
| HSA-MIR-1250-3P | 99.96 | 70.04 | 4038 |
| HSA-MIR-153-5P | 99.89 | 73.86 | 6317 |
| HSA-MIR-6756-5P | 99.82 | 67.97 | 2466 |
| HSA-MIR-6794-5P | 99.76 | 66.38 | 1048 |
| HSA-MIR-4716-3P | 99.69 | 66.73 | 1022 |
| HSA-MIR-6134 | 99.63 | 65.68 | 1537 |
| HSA-MIR-2113 | 99.58 | 71.22 | 1521 |
| HSA-MIR-6731-5P | 99.28 | 67.42 | 2375 |
| HSA-MIR-8085 | 99.28 | 67.56 | 2362 |
| HSA-MIR-7109-5P | 99.18 | 66.13 | 1057 |
| HSA-MIR-4758-3P | 99.12 | 63.96 | 869 |
| HSA-MIR-328-5P | 99.08 | 64.65 | 1000 |
| HSA-MIR-4709-3P | 98.88 | 68.04 | 1594 |
| HSA-MIR-6885-5P | 98.71 | 64.33 | 902 |
| HSA-MIR-6887-5P | 98.56 | 68.49 | 1295 |
| HSA-MIR-6795-5P | 98.52 | 68.51 | 1277 |
| HSA-MIR-6804-5P | 98.39 | 65.77 | 1084 |
| HSA-MIR-1233-5P | 98.19 | 66.71 | 1201 |
| HSA-MIR-6778-5P | 98.19 | 66.59 | 1239 |
| HSA-MIR-10398-5P | 97.12 | 64.94 | 1051 |
| HSA-MIR-1913 | 97.07 | 66.20 | 1417 |
| HSA-MIR-5694 | 97.06 | 67.70 | 682 |
| HSA-MIR-4652-5P | 96.46 | 64.22 | 553 |
| HSA-MIR-885-3P | 95.14 | 63.08 | 448 |
Functional genomics
gnomAD constraint: pLI 0.0327, LOEUF 0.734, missense Z 2.19 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD)
ENST00000357332 splits into 3 regions with different missense tolerance; 0 are missense-constrained. Missense variants in a constrained region (low observed/expected) are more likely to be pathogenic. gnomAD
| Region (GRCh38) | Missense obs / exp | o/e | Constrained |
|---|---|---|---|
| 19:12,737,506–12,737,591 | 64 / 36.7 | 1.74 | no |
| 19:12,737,592–12,748,024 | 230 / 389.2 | 0.59 | no |
| 19:12,748,025–12,748,101 | 39 / 33.0 | 1.18 | no |
| DepMap (CRISPR cell-line fitness): dependent in 71.6% of screened cell lines. |
Most-dependent cell lines (DepMap gene-effect, lower = stronger; ≤ −0.5 shown): OCI-AML2 (-2.238), HT-29 (-2.061), 769-P (-1.98), TC-71 (-1.977), PC-14 (-1.96), OE21 (-1.939), KMRC-3 (-1.926), LP-1 (-1.916), DK-MG (-1.897), C2BBe1 (-1.885), SK-BR-3 (-1.805), SU-DHL-5 (-1.793), HCC1806 (-1.766), Caov-4 (-1.738), SNU-16 (-1.699).
Literature-anchored findings (GeneRIF, showing 18)
- Human ASNA1 is highly expressed in pancreatic beta cells, but not in other pancreatic endocrine cell types, and regulates insulin secretion in cultured cells. (PMID:17289575)
- TRC40/Asna-1 interacts posttranslationally with tail-anchored proteins in a transmembrane domain-dependent manner for delivery to a proteinaceous receptor at the endoplasmic reticulum membrane. (PMID:17382883)
- the hydrophobicity of the TA region dictates whether a precursor is delivered to the ER via the Hsp40/Hsc70 or Asna-1/TRC40-dependent route. (PMID:18667436)
- ASNA1 is a target to overcome platinum resistance in ovarian cancer (PMID:19724867)
- Asna1 can mediate membrane insertion of RAMP4 and Sec61beta without the participation of other cytosolic proteins by a mechanism that depends on the presence of ATP or ADP and a protease-sensitive receptor in the endoplasmic reticulum membrane. (PMID:20375064)
- Asna1 is required for efficient histocompatibility (HLA) class I downregulation mediated by viral protein BNLF2a. (PMID:21296983)
- The coiled-coil domain of WRB is the binding site for TRC40/Asna1. (PMID:21444755)
- Post-translational membrane insertion of tail-anchored transmembrane EF-hand Ca2+ sensor calneurons requires the TRC40/Asna1 protein chaperone. (PMID:21878631)
- Proteins bind to TRC40 and can utilise this component for their delivery to the ER membrane. (PMID:22505607)
- Results indicate calcium-modulating cyclophilin ligand (CAML) and WRB as components of the TRC40 receptor complex and a crucial mechanism for driving ER membrane insertion of TA proteins in mammalian cells. (PMID:23041287)
- PEX19 formed a complex with the peroxisomal tail anchored protein PEX26 in the cytosol and translocated it directly to peroxisomes by a TRC40-independent class I pathway. (PMID:23460677)
- The repertoire of VAPB interactors is more diverse than previously anticipated and link VAPB to the function of ATPase complexes such as p97/FAF1 and ASNA1/transmembrane-domain recognition complex. (PMID:24885147)
- Emerin interacts with TRC40 in situ. (PMID:26675233)
- reveal unanticipated complexity in the mutual regulation of the TRC40 receptor subunits and raise the question as to the role of the excess CAML in the endoplasmic reticulum (PMID:27226539)
- The authors conclude that the TRC40 pathway is critical for hearing and propose that otoferlin is an essential substrate of this pathway in hair cells. (PMID:27458190)
- Asna1/TRC40 is required at a late step of herpes simplex virus type 1 infection for efficient release of mature virions to the extracellular milieu. (PMID:27765046)
- Golgi-resident tail-anchored proteins such as the golgins golgin-84, CASP and giantin as well as the vesicle-associated membrane-protein-associated proteins VAPA and VAPB interact with TRC40. (PMID:31182645)
- Mutation in ASNA1 cause severe pediatric cardiomyopathy and early death. (PMID:31461301)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | get3 | ENSDARG00000018190 |
| mus_musculus | Get3 | ENSMUSG00000052456 |
| rattus_norvegicus | Get3 | ENSRNOG00000003747 |
| drosophila_melanogaster | CG1598 | FBGN0033191 |
| caenorhabditis_elegans | WBGENE00014025 |
Mouse-model phenotypes
Observed phenotypes of the mouse ortholog (MGI:1928379) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 1 distinct phenotype terms.
| Mouse phenotype (MP) | Records |
|---|---|
| embryonic lethality, complete penetrance | 1 |
Additional cross-species homologs
Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.
| Organism | UniProt | Identity | Method |
|---|---|---|---|
| Bos taurus | A5PJI5 | 100.0% | Diamond |
| Histoplasma mississippiense | A6QRP2 | 100.0% | Diamond |
| Saccharomyces cerevisiae YJM789 | A6ZXM9 | 100.0% | Diamond |
| Aspergillus fumigatus A1163 | B0XXL5 | 100.0% | Diamond |
| Saccharomyces cerevisiae RM11-1a | B3LGZ3 | 100.0% | Diamond |
| Aspergillus flavus NRRL3357 | B8N3P7 | 100.0% | Diamond |
| Paracoccidioides brasiliensis Pb03 | C0S3F7 | 100.0% | Diamond |
| Paracoccidioides brasiliensis Pb18 | C1G182 | 100.0% | Diamond |
| Blastomyces dermatitidis ER-3 | C5G9V3 | 100.0% | Diamond |
| Blastomyces gilchristii SLH14081 | C5JUG0 | 100.0% | Diamond |
| Coccidioides posadasii C735 delta SOWgp | C5P9K5 | 100.0% | Diamond |
| Histoplasma capsulatum H143 | C6HRP6 | 100.0% | Diamond |
| Candida albicans SC5314 | P0CB54 | 100.0% | Diamond |
| Candida albicans WO-1 | P0CB55 | 100.0% | Diamond |
| Cryptococcus deneoformans JEC21 | P0CM24 | 100.0% | Diamond |
| Cryptococcus deneoformans B-3501A | P0CM25 | 100.0% | Diamond |
| Saccharomyces cerevisiae S288C | Q12154 | 100.0% | Diamond |
| Coccidioides immitis RS | Q1E167 | 100.0% | Diamond |
| Aspergillus oryzae RIB40 | Q2UKT0 | 100.0% | Diamond |
| Aspergillus fumigatus Af293 | Q4WY07 | 100.0% | Diamond |
| Aspergillus fischeri NRRL 181 | A1D6T7 | 99.4% | Diamond |
| Botrytis cinerea B05.10 | A6S7T2 | 99.4% | Diamond |
| Sclerotinia sclerotiorum 1980 UF-70 | A7EHP6 | 99.4% | Diamond |
| Histoplasma capsulatum G186AR | C0NV23 | 99.4% | Diamond |
| Drosophila persimilis | B4H8J5 | 99.1% | Diamond |
| Drosophila simulans | B4QEC4 | 99.1% | Diamond |
| Drosophila pseudoobscura pseudoobscura | Q28YJ2 | 99.1% | Diamond |
| Drosophila erecta | B3N9X2 | 98.8% | Diamond |
| Drosophila yakuba | B4P1R6 | 98.8% | Diamond |
| Paracoccidioides lutzii Pb01 | C1GTV2 | 98.8% | Diamond |
| Talaromyces marneffei ATCC 18224 | B6Q334 | 98.5% | Diamond |
| Talaromyces stipitatus ATCC 10500 | B8M4Y9 | 98.5% | Diamond |
| Xenopus tropicalis | Q0IIZ2 | 98.5% | Diamond |
| Xenopus laevis | Q6GNQ1 | 98.5% | Diamond |
| Candida dubliniensis CD36 | B9W757 | 98.3% | Diamond |
| Drosophila mojavensis | B4KTG7 | 97.9% | Diamond |
| Drosophila virilis | B4LN33 | 97.9% | Diamond |
| Drosophila ananassae | B3MHB7 | 97.6% | Diamond |
| Plasmodium vivax Sal-1 | A5K5W9 | 97.1% | Diamond |
| Plasmodium knowlesi strain H | B3L1G8 | 97.1% | Diamond |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| HOOK2 | protein-coding | 29911 |
| JUNB | protein-coding | 3726 |
| BEST2 | protein-coding | 54831 |
| PRDX2 | protein-coding | 7001 |
| SNORD135 | snoRNA | 106633804 |
| SNORD41 | snoRNA | 26810 |
| TNPO2 | protein-coding | 30000 |
| TRIR | protein-coding | 79002 |
| MIR5684 | ncRNA | 100847071 |
| FBXW9 | protein-coding | 84261 |
| THSD8 | protein-coding | 111644133 |
| GNG14 | protein-coding | 105372280 |
Protein
Protein identifiers
ATPase GET3 — O43681 (reviewed: O43681)
Alternative names: Arsenical pump-driving ATPase, Arsenite-stimulated ATPase, Guided entry of tail-anchored proteins factor 3, ATPase, Transmembrane domain recognition complex 40 kDa ATPase subunit, hARSA-I, hASNA-I
All UniProt accessions (1): O43681
UniProt curated annotations — full annotation on UniProt →
Function. ATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors GET1/WRB and CAMLG/GET2, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subsequently, the homodimer reverts towards the open dimer state, lowering its affinity for the GET1-CAMLG receptor, and returning it to the cytosol to initiate a new round of targeting. May be involved in insulin signaling.
Subunit / interactions. Homodimer. Component of the Golgi to ER traffic (GET) complex, which is composed of GET1/WRB, CAMLG/GET2 and GET3/TRC40. Within the complex, CAMLG and GET1 form a heterotetramer which is stabilized by phosphatidylinositol binding and which binds to the GET3 homodimer. Interacts with CAMLG (via N-terminus). GET3 shows a higher affinity for CAMLG than for GET1. Interacts with SERP1 and SEC61B. Interacts with GET4.
Subcellular location. Cytoplasm. Endoplasmic reticulum. Nucleus. Nucleolus.
Tissue specificity. Expressed in the epithelial cells of the liver, kidney, and stomach wall, in the adrenal medulla, in the islet cells of the pancreas, in the red pulp of the spleen, and in cardiac and skeletal muscle.
Disease relevance. Cardiomyopathy, dilated, 2H (CMD2H) [MIM:620203] A form of dilated cardiomyopathy, a disorder characterized by ventricular dilation and impaired systolic function, resulting in congestive heart failure and arrhythmia. Patients are at risk of premature death. CMD2H is an autosomal recessive form characterized by rapid progression and death in early infancy. The disease is caused by variants affecting the gene represented in this entry.
Similarity. Belongs to the arsA ATPase family.
RefSeq proteins (3): NP_001358417, NP_001358418, NP_004308* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR016300 | ATPase_ArsA/GET3 | Family |
| IPR025723 | ArsA/GET3_ATPase-like | Domain |
| IPR027417 | P-loop_NTPase | Homologous_superfamily |
| IPR027542 | ATPase_ArsA/GET3_euk | Family |
Pfam: PF02374
Enzyme classification (BRENDA)
- EC 7.3.2.7 — arsenite-transporting ATPase (BRENDA: 14 organisms, 34 substrates, 5 inhibitors, 15 Km, 0 kcat entries)
Substrate kinetics (BRENDA)
3 substrates with measured Km, best-characterized 3. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| ATP | 0.021–2 | 11 |
| ARSENITE | 0.1 | 1 |
| SB3+ | — | 1 |
Catalyzed reactions (Rhea)
- ATP + H2O = ADP + phosphate + H(+) (RHEA:13065)
UniProt features (56 total): helix 17, binding site 12, strand 9, turn 5, sequence variant 4, sequence conflict 3, mutagenesis site 2, initiator methionine 1, chain 1, modified residue 1, active site 1
Structure
Experimental structures (PDB)
4 structures by resolution:
| PDB | Title | Method | Resolution (Å) |
|---|---|---|---|
| 8CQZ | Homo sapiens Get3 in complex with the Get1 cytoplasmic domain | X-RAY DIFFRACTION | 2.8 |
| 8CR1 | Homo sapiens Get1/Get2 heterotetramer in complex with a Get3 dimer | ELECTRON MICROSCOPY | 3.2 |
| 6SO5 | Homo sapiens WRB/CAML heterotetramer in complex with a TRC40 dimer | ELECTRON MICROSCOPY | 4.2 |
| 8CR2 | Homo sapiens Get1/Get2 heterotetramer (a3’ deletion variant) in complex with a Get3 dimer | ELECTRON MICROSCOPY | 4.2 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O43681-F1 | 79.69 | 0.50 |
Human Protein Atlas
Protein class: Transporters, Primary Active Transporters, Predicted intracellular proteins, Essential proteins
Protein evidence: Evidence at protein level
Subcellular location (HPA, imaging): nucleoli; nucleoplasm
Antibody reliability (HPA): IH approved · IF enhanced
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1)
| Position | Role |
|---|---|
| 74 |
Ligand- & substrate-binding residues (12)
| Position | Role |
|---|---|
| 278 | ATP |
| 289 | Zn(2+) |
| 292 | Zn(2+) |
| 319 | ATP |
| 321 | ATP |
| 45 | ATP |
| 46 | ATP |
| 49 | ATP |
| 50 | ATP |
| 51 | ATP |
| 52 | ATP |
| 251 | ATP |
Post-translational modifications (1)
| Type | Positions |
|---|---|
| N-acetylalanine | 2 |
Mutagenesis-validated functional residues (2)
| Position | Phenotype |
|---|---|
| 46 | abolishes atpase activity, dominantly inhibits the ta protein insertion pathway. |
| 86 | reduces ta protein insertion pathway. |
Function
Pathways and Gene Ontology
Reactome pathways
0 curated (TAS) of 2; 0 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
2 pathways:
| ID | Pathway | Evidence |
|---|---|---|
| R-HSA-9609523 | Insertion of tail-anchored proteins into the endoplasmic reticulum membrane | electronic |
| R-HSA-9609507 | Protein localization | — |
MSigDB gene sets: 179 (showing top):
STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN, IVANOVA_HEMATOPOIESIS_LATE_PROGENITOR, DACOSTA_UV_RESPONSE_VIA_ERCC3_UP, SHIPP_DLBCL_CURED_VS_FATAL_DN, MODULE_70, MARTINEZ_RB1_TARGETS_UP, RICKMAN_METASTASIS_DN, GOBP_ESTABLISHMENT_OF_PROTEIN_LOCALIZATION_TO_MEMBRANE, GOBP_ENDOMEMBRANE_SYSTEM_ORGANIZATION, CYTAGCAAY_UNKNOWN, GOBP_PROTEIN_LOCALIZATION_TO_ORGANELLE, USF_02, GOBP_MEMBRANE_ORGANIZATION, GRUETZMANN_PANCREATIC_CANCER_UP, GOBP_ENDOPLASMIC_RETICULUM_ORGANIZATION
GO Biological Process (2): protein insertion into ER membrane (GO:0045048), tail-anchored membrane protein insertion into ER membrane (GO:0071816)
GO Molecular Function (7): ATP binding (GO:0005524), ATP hydrolysis activity (GO:0016887), metal ion binding (GO:0046872), protein carrier activity (GO:0140597), nucleotide binding (GO:0000166), protein binding (GO:0005515), hydrolase activity (GO:0016787)
GO Cellular Component (7): nucleoplasm (GO:0005654), nucleolus (GO:0005730), cytoplasm (GO:0005737), endoplasmic reticulum membrane (GO:0005789), GET complex (GO:0043529), extracellular exosome (GO:0070062), endoplasmic reticulum (GO:0005783)
Reactome top-level categories
1 top-level categories:
| Category | Pathways |
|---|---|
| Protein localization | 1 |
GO top-level categories
27 GO namespaces:
| Category | Terms |
|---|---|
| nuclear lumen | 2 |
| cellular anatomical structure | 2 |
| endoplasmic reticulum organization | 1 |
| protein localization to organelle | 1 |
| protein insertion into membrane | 1 |
| protein insertion into ER membrane | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| anion binding | 1 |
| ribonucleoside triphosphate phosphatase activity | 1 |
| ATP-dependent activity | 1 |
| cation binding | 1 |
| molecular carrier activity | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| binding | 1 |
| catalytic activity | 1 |
| intracellular membraneless organelle | 1 |
| intracellular anatomical structure | 1 |
| organelle membrane | 1 |
| nuclear outer membrane-endoplasmic reticulum membrane network | 1 |
| endoplasmic reticulum subcompartment | 1 |
| endoplasmic reticulum protein-containing complex | 1 |
| extracellular vesicle | 1 |
| cytoplasm | 1 |
| endomembrane system | 1 |
| intracellular membrane-bounded organelle | 1 |
Experimentally-supported GO annotations
GO terms backed by direct experimental evidence (ECO experimental codes) — 8 of 16 annotations. The rest are phylogenetic / computational / electronic (IEA).
8 experimentally-supported GO terms:
| GO term | NS | Evidence |
|---|---|---|
| tail-anchored membrane protein insertion into ER membrane | BP | direct assay |
| GET complex | CC | direct assay |
| endoplasmic reticulum membrane | CC | direct assay |
| extracellular exosome | CC | high-throughput assay |
| nucleolus | CC | direct assay |
| nucleoplasm | CC | direct assay |
| ATP hydrolysis activity | MF | direct assay |
| protein carrier activity | MF | direct assay |
Protein interactions and networks
STRING
showing 15 of 1,738 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| GET3 | GET4 | Q7L5D6 | 992 |
| GET3 | UBL4A | P11441 | 982 |
| GET3 | GET1 | O00258 | 922 |
| GET3 | SGTA | O43765 | 819 |
| GET3 | CAMLG | P49069 | 812 |
| GET3 | BAG6 | P46379 | 750 |
| GET3 | SEC61A1 | P38378 | 728 |
| GET3 | SRP54 | P13624 | 698 |
| GET3 | STX5 | Q13190 | 667 |
| GET3 | PEX3 | P56589 | 645 |
| GET3 | PEX19 | P40855 | 641 |
| GET3 | PEX26 | Q7Z412 | 639 |
| GET3 | ARSD | P51689 | 621 |
| GET3 | TMEM208 | Q9BTX3 | 617 |
| GET3 | RNF126 | Q9BV68 | 595 |
IntAct
Human interaction partners of GET3 in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
showing 30 of 44 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| CAMLG | association | 0.820 | 6 |
| GET4 | physical association | 0.800 | 7 |
| GPX7 | physical association | 0.720 | 6 |
| GET1 | association | 0.640 | 4 |
| AGR2 | physical association | 0.560 | 7 |
| ASPH | physical association | 0.560 | 6 |
| RCN1 | physical association | 0.560 | 5 |
| CPR5 | physical association | 0.560 | 3 |
| CREB3L4 | physical association | 0.560 | 3 |
| CSPG5 | physical association | 0.560 | 3 |
| DDIT4L | physical association | 0.560 | 3 |
| EMSY | physical association | 0.560 | 3 |
| FAM163A | physical association | 0.560 | 3 |
| FAM209A | physical association | 0.560 | 3 |
| FKBP7 | physical association | 0.560 | 3 |
| GOLM1 | physical association | 0.560 | 3 |
| GPX8 | physical association | 0.560 | 3 |
| HILPDA | physical association | 0.560 | 3 |
| IGFBP6 | physical association | 0.560 | 3 |
| KCNE4 | physical association | 0.560 | 3 |
| KCNE5 | physical association | 0.560 | 3 |
| LDLRAD4 | physical association | 0.560 | 3 |
| PDIA6 | physical association | 0.560 | 3 |
| PEX14 | physical association | 0.560 | 3 |
| PGRMC1 | physical association | 0.560 | 3 |
| PGRMC2 | physical association | 0.560 | 3 |
| PRB3 | physical association | 0.560 | 3 |
| PRR4 | physical association | 0.560 | 3 |
| RHEX | physical association | 0.560 | 3 |
| SMIM19 | physical association | 0.560 | 3 |
SIGNOR signaling
1 signaling interactions:
| A | Effect | B | Mechanism |
|---|---|---|---|
| GET3 | “form complex” | “GET complex” | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 44 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs) | 5 | 16.6× | 4e-04 |
Disease & clinical
Genetic variants
Variant evidence for GET3: 42 ClinVar records (1 pathogenic / likely pathogenic). Per-variant detail is on Sugi Variant.
ClinVar
42 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 0 |
| Uncertain significance | 29 |
| Likely benign | 1 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (1)
Showing all 1 pathogenic / likely-pathogenic ClinVar records, ranked by ClinVar review status (expert panel → multiple submitters → single submitter), then by number of submitting labs.
| Variant ID | HGVS | Classification | Review | Submitters |
|---|---|---|---|---|
| 2443825 | NM_004317.4(GET3):c.488T>C (p.Val163Ala) | Pathogenic | no assertion criteria provided | 1 |
Per-variant reference — Sugi Variant
Explore GET3’s pathogenic and likely-pathogenic variants individually — each with its ClinVar classification and conditions, applied ACMG criteria (ClinGen expert panel, where curated), the calibrated in-silico predictors (AlphaMissense, REVEL, SaProt, conservation), gnomAD frequency, and the predictor-disagreement QC signal — on Sugi Variant.
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 34 predictions of 453):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 19:12737667–12737668 | donor_loss | 1.0000 | 4 |
| 19:12745367–12745368 | acceptor_gain | 1.0000 | 2 |
| 19:12745375–12745376 | acceptor_loss | 1.0000 | 5 |
| 19:12745508 | donor_gain | 1.0000 | |
| 19:12745526–12745527 | donor_loss | 1.0000 | 5 |
| 19:12745739 | donor_gain | 1.0000 | |
| 19:12747305–12747306 | donor_loss | 1.0000 | 4 |
| 19:12747393–12747394 | acceptor_loss | 1.0000 | 6 |
| 19:12747593–12747594 | donor_loss | 1.0000 | 5 |
| 19:12747938 | acceptor_gain | 1.0000 |
AlphaMissense
1,397 missense substitutions predicted likely pathogenic (of 2,327 scored), across 285 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| M103 | 9 | 0.928 | 0.996 |
| D74 | 8 | 1.000 | 1.000 |
| D166 | 8 | 1.000 | 1.000 |
| D81 | 8 | 0.999 | 1.000 |
| H172 | 8 | 0.999 | 1.000 |
| H77 | 8 | 0.997 | 1.000 |
| D143 | 8 | 0.994 | 0.998 |
| F41 | 8 | 0.992 | 0.999 |
| F165 | 8 | 0.992 | 0.999 |
| F244 | 8 | 0.992 | 1.000 |
| N278 | 8 | 0.986 | 1.000 |
| F83 | 8 | 0.985 | 0.999 |
| F236 | 8 | 0.985 | 0.999 |
| D271 | 8 | 0.979 | 0.993 |
| D312 | 8 | 0.979 | 0.995 |
| N78 | 8 | 0.978 | 1.000 |
| F252 | 8 | 0.978 | 1.000 |
| F87 | 8 | 0.973 | 0.999 |
| F179 | 8 | 0.963 | 0.994 |
| D106 | 8 | 0.956 | 0.993 |
HPA cancer prognostics
RNA cancer specificity: Low cancer specificity
Human Protein Atlas survival analysis — favorable = higher expression predicts better survival.
1 prognostic cancer types:
| Cancer | Prognostic | p-value |
|---|---|---|
| Kidney Renal Clear Cell Carcinoma (TCGA) | favorable | 2.37e-08 |
Disease associations
OMIM: gene MIM:601913 | disease phenotypes: MIM:620203
GenCC curated gene-disease
2 curated gene-disease records:
| Disease | Classification | Inheritance | Records |
|---|---|---|---|
| cardiomyopathy, dilated, 2H | Limited | Autosomal recessive | |
| acute proliferative glomerulonephritis | Limited | Autosomal recessive |
ClinGen Gene-Disease Validity
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
1 validity classifications:
| Disease | Classification | Inheritance |
|---|---|---|
| cardiomyopathy, dilated, 2H | Limited | AR |
Genomics England panels (PanelApp)
Clinical diagnostic gene panels including this gene (2 panels, 0 green/diagnostic-grade). Confidence: green = diagnostic, amber = moderate.
2 panels:
| Panel | Rating |
|---|---|
| Paediatric or syndromic cardiomyopathy | amber |
| Unexplained death in infancy and sudden unexplained death in childhood | amber |
Mondo (2): cardiomyopathy, dilated, 2H (MONDO:0859358), acute proliferative glomerulonephritis (MONDO:0001644)
HPO phenotypes
22 phenotypes (HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000407 | Sensorineural hearing impairment |
| HP:0000969 | Edema |
| HP:0001635 | Congestive heart failure |
| HP:0001644 | Dilated cardiomyopathy |
| HP:0001684 | Secundum atrial septal defect |
| HP:0001727 | Thromboembolic stroke |
| HP:0002789 | Tachypnea |
| HP:0002875 | Exertional dyspnea |
| HP:0003198 | Myopathy |
| HP:0003457 | EMG abnormality |
| HP:0003623 | Neonatal onset |
| HP:0003811 | Neonatal death |
| HP:0006543 | Cardiorespiratory arrest |
| HP:0011623 | Muscular ventricular septal defect |
| HP:0011675 | Arrhythmia |
| HP:0011968 | Feeding difficulties |
| HP:0012378 | Fatigue |
| HP:0012664 | Reduced left ventricular ejection fraction |
| HP:0012764 | Orthopnea |
| HP:0025169 | Left ventricular systolic dysfunction |
| HP:0100578 | Lipoatrophy |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL6066311 (SINGLE PROTEIN)
PharmGKB: 1 entry (CPIC guideline: no)
Binding affinities (BindingDB)
1 measured of 1 human assays (1 total across all organisms); most potent 1 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| CHEMBL5653589 | KD | 1440 nM |
ChEMBL bioactivities
2 potent at pChembl≥5 of 2 total, top 2 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.78 | Kd | 16.48 | nM | CHEMBL5653589 |
| 7.78 | ED50 | 16.48 | nM | CHEMBL5653589 |
PubChem BioAssay actives
1 with measured affinity, of 2 total; 1 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2147897: Binding affinity to human ASNA1 incubated for 45 mins by Kinobead based pull down assay | kd | 0.0165 | uM |
CTD chemical–gene interactions
27 total (human), top 27 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | increases activity, increases expression | 2 |
| aristolochic acid I | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| alpha-pinene | affects cotreatment, increases oxidation, increases abundance | 1 |
| pirinixic acid | affects binding, decreases expression, increases activity | 1 |
| bisphenol A | increases expression | 1 |
| perfluorooctanoic acid | increases expression | 1 |
| methacrylaldehyde | affects cotreatment, increases oxidation, increases abundance | 1 |
| perfluorooctane sulfonic acid | increases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| nutlin 3 | affects cotreatment, increases secretion | 1 |
| Arsenic Trioxide | increases expression | 1 |
| Acrolein | affects cotreatment, increases oxidation, increases abundance | 1 |
| Air Pollutants | affects cotreatment, increases abundance, increases oxidation | 1 |
| Arbutin | decreases expression | 1 |
| Benzo(a)pyrene | affects methylation | 1 |
| Cisplatin | affects response to substance | 1 |
| Dactinomycin | affects cotreatment, increases secretion | 1 |
| Doxorubicin | decreases expression | 1 |
| Ivermectin | decreases expression | 1 |
| Lead | decreases expression | 1 |
| Ozone | affects cotreatment, increases oxidation, increases abundance | 1 |
| Smoke | decreases expression | 1 |
| Tretinoin | increases expression | 1 |
| Valproic Acid | increases expression | 1 |
| Aflatoxin B1 | increases expression | 1 |
| Volatile Organic Compounds | affects cotreatment, increases oxidation | 1 |
ChEMBL screening assays
1 unique, capped per target: 1 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5650939 | Binding | Binding affinity to human ASNA1 incubated for 45 mins by Kinobead based pull down assay | NVP-BHG712: Effects of Regioisomers on the Affinity and Selectivity toward the EPHrin Family. — *ChemMedChem* |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
showing 60 of 300 trials:
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT00029224 | Phase 4 | COMPLETED | Treatment With Zoledronic Acid in Patients With Breast Cancer, Multiple Myeloma, and Prostate Cancer With Cancer Related Bone Lesions |
| NCT00035997 | Phase 4 | COMPLETED | Open-label Trial on the Effect of I.V. Zoledronic Acid 4 mg on Bone Density in Hormone Sensitive Prostate Cancer Patients With Bone Metastasis |
| NCT00063609 | Phase 4 | COMPLETED | The Effect of Zoledronic Acid on Bone Loss in Prostate Cancer Patients Undergoing Androgen Deprivation Therapy |
| NCT00103623 | Phase 4 | SUSPENDED | The Plenaxis® Experience Study |
| NCT00106392 | Phase 4 | COMPLETED | A Safety and Efficacy Study of Prograf in the Prevention of Erectile Dysfunction After Radical Prostatectomy |
| NCT00185029 | Phase 4 | UNKNOWN | MR-Lymphography and Lymph Node Staging in Prostate Cancer |
| NCT00199485 | Phase 4 | COMPLETED | Angelica Sinensis for the Treatment of Hot Flashes in Men Undergoing LHRH Therapy for Prostate Cancer |
| NCT00219219 | Phase 4 | COMPLETED | Zoledronic Acid in the Prevention of Skeletal-related Events in Hormone Refractory and Hormone-sensitive Prostate Cancer Patients With Bone Metastases |
| NCT00219271 | Phase 4 | COMPLETED | Effect Of Zoledronic Acid On Circulating And Bone Marrow-Residing Prostate Cancer Cells In Patients With Clinically Localized Prostate Cancer |
| NCT00237146 | Phase 4 | COMPLETED | Study to Evaluate Zoledronic Acid on Quality of Life and Skeletal-related Events as Adjuvant Treatment in Patients With Hormone-naïve Prostate Cancer and Bone Metastasis Who Have Undergone Orchiectomy |
| NCT00242554 | Phase 4 | COMPLETED | Open-label Phase IV Clinical Trial to Evaluate the Safety and Tolerability of Zoledronic Acid in Patients With Prostate Cancer and Bone Metastases |
| NCT00280098 | Phase 4 | COMPLETED | Docetaxel in the Treatment of Hormone Refractory Prostate Cancer |
| NCT00293696 | Phase 4 | COMPLETED | Casodex/Zoladex Biomarkers in Localised Prostate Cancer |
| NCT00334139 | Phase 4 | COMPLETED | Effect of Zoledronic Acid on Bone Metabolism in Patients With Bone Metastasis and Prostate or Breast Cancer |
| NCT00375765 | Phase 4 | COMPLETED | Effects On Dihydrotestosterone Regulated Gene Expression In Benign Prostatic Hyperplasia Or Prostate Cancer |
| NCT00391690 | Phase 4 | COMPLETED | Evaluation of Bone Markers as Diagnostic Tools for Early Detection of Bone Metastases in Patients With High Risk Prostate Cancer |
| NCT00422708 | Phase 4 | COMPLETED | Local Anesthesia for Prostate Biopsy |
| NCT00526331 | Phase 4 | COMPLETED | Evaluation of Arterial Pressure Based Cardiac Output for Goal-Directed Perioperative Therapy |
| NCT00590213 | Phase 4 | COMPLETED | Compare the Value of Prophylactic Versus Therapeutic Breast Radiotherapy in CASODEX |
| NCT00629330 | Phase 4 | TERMINATED | Dissemination of Prostate Cancer Screening to PCP’s in African American Communities |
| NCT00771966 | Phase 4 | COMPLETED | Radical Prostatectomy and Perioperative Fluid Therapy |
| NCT00805701 | Phase 4 | COMPLETED | Study Assessing The Efficacy And Safety Of Avodart (Dutasteride) At Improving Urinary Symptoms In Men With Prostate Cancer Who Are Undergoing Seed Implantation |
| NCT00859027 | Phase 4 | COMPLETED | Effect Of Risedronate On Bone Mass In Older Men Receiving Neoadjuvant Therapy For Prostate Cancer |
| NCT00906269 | Phase 4 | UNKNOWN | Can Hyperbaric Oxygen Improve Erectile Function Following Surgery for Prostate Cancer |
| NCT00953277 | Phase 4 | COMPLETED | Study of Nerve Reconstruction Using AVANCE in Subjects Who Undergo Robotic Assisted Prostatectomy for Treatment of Prostate Cancer |
| NCT00982800 | Phase 4 | COMPLETED | Does Postoperative Gabapentin Reduce Pain, Opioid Consumption and Anxiety and Have a Positive Effect on Health Related Quality of Life After Radical Prostatectomy? |
| NCT01083199 | Phase 4 | COMPLETED | Global Performance Evaluation of the AMS CONTINUUM™ Device |
| NCT01136226 | Phase 4 | COMPLETED | Evaluate Recovery of Testosterone for Patients Using Eligard |
| NCT01161563 | Phase 4 | COMPLETED | Randomized Crossover Trial to Assess the Tolerability of Gonadotropin Releasing Hormone (GnRH) Analogue Administration |
| NCT01230905 | Phase 4 | COMPLETED | Study to Monitor the Effects of Androgen Suppression Treatment on the Heart |
| NCT01296672 | Phase 4 | COMPLETED | 3 Month Finasteride Challenge Test Can Significantly Improve the Performance of Screening for Prostate Cancer |
| NCT01365143 | Phase 4 | TERMINATED | Prospective Randomized Trial Comparing Robotic Versus Open Radical Prostatectomy |
| NCT01379742 | Phase 4 | UNKNOWN | Comparison of Between ThinSeed™ and OncoSeed™ for Permanent Prostate Brachytherapy |
| NCT01486563 | Phase 4 | COMPLETED | Hydroxyethyl Starch and Renal Function After Radical Prostatectomy |
| NCT01511874 | Phase 4 | COMPLETED | Efficacy and Safety Study of ELIGARD 22.5mg With Prostate Cancer |
| NCT01512472 | Phase 4 | TERMINATED | Firmagon (Degarelix) Intermittent Therapy |
| NCT01547416 | Phase 4 | COMPLETED | The Effect of Combined General/Epidural Anesthesia Versus General Anesthesia on Diaphragmatic Function |
| NCT01571544 | Phase 4 | COMPLETED | The Use of Thermal Suits as Preventing Hypothermia During Surgery |
| NCT01581749 | Phase 4 | UNKNOWN | Evaluation of Truebeam for Low-Intermediate Risk Prostate Cancer |
| NCT01649635 | Phase 4 | COMPLETED | Study of Cabazitaxel Combined With Prednisone and Prophylaxis of Neutropenia Complications in the Treatment of Patients With Metastatic Castration-resistant Prostate Cancer |
| NCT01673984 | Phase 4 | TERMINATED | GP Extended Action Triptorelin |
| NCT01753297 | Phase 4 | COMPLETED | A Study of Immediate 9 Months Adjuvant Hormone Therapy With Triptorelin 11.25 mg Versus Active Surveillance After Radical Prostatectomy in High Risk Prostate Cancer Patients. |
| NCT01794793 | Phase 4 | COMPLETED | Study to Allow Access to Pasireotide for Patients Benefiting From Pasireotide Treatment in Novartis-sponsored Studies |
| NCT01950871 | Phase 4 | TERMINATED | Prostate Guided Biopsy Study Evaluating the Diagnostic Performance of Prostate HistoScanning |
| NCT01995513 | Phase 4 | COMPLETED | Safety Study of Continued Enzalutamide Treatment In Prostate Cancer Patients |
| NCT02102646 | Phase 4 | COMPLETED | MRI Substudy; Metabolic Changes Due to Iatrogenic Hypogonadism |
| NCT02116582 | Phase 4 | COMPLETED | A Study to Evaluate Enzalutamide After Abiraterone in Metastatic Castration-Resistant Prostate Cancer |
| NCT02149628 | Phase 4 | COMPLETED | The Effect of Propofol Based Total Intravenous Anesthesia on Oxidative Stress and Nitric Oxide |
| NCT02405858 | Phase 4 | COMPLETED | A Study of Abiraterone Acetate in Metastatic Castration-Resistant Prostate Cancer Participants Who Responded Poorly to the First-line Combined Androgen Blockade Therapy |
| NCT02441517 | Phase 4 | TERMINATED | A Study of Enzalutamide Re-treatment in Metastatic Castration-resistant Prostate Cancer After Docetaxel and/or Cabazitaxel Treatment |
| NCT02441894 | Phase 4 | COMPLETED | Combination of Cabazitaxel With Prednisolone With Primary Prophylaxis With PEG-G-CSF in Treatment of Patients With Prostate Cancer |
| NCT02475057 | Phase 4 | COMPLETED | Endothelial Function in Prostate Cancer Patients on Degarelix vs. Luteinizing Hormone-Releasing Hormone Agonists |
| NCT02511665 | Phase 4 | UNKNOWN | Metformin And Longevity |
| NCT02651948 | Phase 4 | COMPLETED | Transperineal, MRI-guided, Prostate Biopsy |
| NCT02721433 | Phase 4 | COMPLETED | 4-weekly Versus 12-weekly Administration of Bone-targeted Agents in Patients With Bone Metastases |
| NCT02726009 | Phase 4 | COMPLETED | A Trial to Evaluate Safety of Firmagon® (Degarelix) in Indian Patients Diagnosed With Advanced Hormone-dependent Prostate Cancer |
| NCT02749825 | Phase 4 | TERMINATED | Comparison of Trelstar Versus Lupron or Zoladex in Advanced Prostate Cancer |
| NCT02757365 | Phase 4 | UNKNOWN | Efficiency Study of Aspirin to Prevent the Occurrence of Prostate Cancer |
| NCT02773251 | Phase 4 | COMPLETED | The Effect of Guardix-solution for the Prevention of Postoperative Intestinal Adhesion and Intestinal Obstruction After Laparoscopic Pelvic Cavity Surgery |
| NCT02812186 | Phase 4 | COMPLETED | Deep Versus Moderate Neuromuscular Blockade During Laparoscopic Surgery |
Predicted chemistry — Sugi Predict
The predicted patent-compound landscape for GET3 across ~30M SureChEMBL compounds — explore on Sugi Predict.
Related Atlas pages
- Associated diseases: cardiomyopathy, dilated, 2H, acute proliferative glomerulonephritis
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): acute proliferative glomerulonephritis, cardiomyopathy, dilated, 2H