GHRHR

gene
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Summary

GHRHR (growth hormone releasing hormone receptor, HGNC:4266) is a protein-coding gene on chromosome 7p14.3, encoding Growth hormone-releasing hormone receptor (Q02643). Receptor for GRF, coupled to G proteins which activate adenylyl cyclase.

This gene encodes a receptor for growth hormone-releasing hormone. Binding of this hormone to the receptor leads to synthesis and release of growth hormone. Mutations in this gene have been associated with isolated growth hormone deficiency (IGHD), also known as Dwarfism of Sindh, a disorder characterized by short stature.

Source: NCBI Gene 2692 — RefSeq curated summary.

At a glance

  • Gene–disease (curated): isolated growth hormone deficiency type IB (Definitive, GenCC) — +1 more curated relationship
  • GWAS associations: 1
  • Clinical variants (ClinVar): 344 total — 25 pathogenic, 11 likely-pathogenic
  • Phenotypes (HPO): 7
  • Druggable target: yes — 1 molecules with ChEMBL bioactivity
  • MANE Select transcript: NM_000823

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:4266
Approved symbolGHRHR
Namegrowth hormone releasing hormone receptor
Location7p14.3
Locus typegene with protein product
StatusApproved
Ensembl geneENSG00000106128
Ensembl biotypeprotein_coding
OMIM139191
Entrez2692

Gene structure

Transcript identifiers

Ensembl transcripts: 11 — 4 protein_coding_CDS_not_defined, 3 protein_coding, 2 nonsense_mediated_decay, 2 retained_intron

ENST00000326139, ENST00000337750, ENST00000396227, ENST00000409316, ENST00000409904, ENST00000461390, ENST00000461424, ENST00000463164, ENST00000466427, ENST00000473133, ENST00000489974

RefSeq mRNA: 1 — MANE Select: NM_000823 NM_000823

CCDS: CCDS5432

Canonical transcript exons

ENST00000326139 — 13 exons

ExonStartEnd
ENSE000016160533096906330969170
ENSE000016771883096883430968936
ENSE000019514193096395330964125
ENSE000034679103097577730975868
ENSE000035250163097442930974489
ENSE000035348603097196330972095
ENSE000035982653096986730969964
ENSE000036416153097497130975040
ENSE000036427703097911930979528
ENSE000036651813097728130977322
ENSE000036842633097111930971216
ENSE000036880943097642930976558
ENSE000036940243097398530974138

Expression profiles

Bgee: expression breadth ubiquitous, 154 present calls, max score 98.60.

FANTOM5 (CAGE): breadth broad, TPM avg 1.3273 / max 773.4305, expressed in 186 samples.

FANTOM5 promoters (10 alternative TSS)

Promoter IDTPM avgSamples expressed
780300.3978182
780210.25935
780220.24383
780190.13653
780280.12566
780200.06903
780230.03073
780290.03075
780270.02524
780260.00871

Top tissues by expression

278 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
pituitary glandUBERON:000000798.60gold quality
adenohypophysisUBERON:000219697.60gold quality
oocyteCL:000002373.55silver quality
secondary oocyteCL:000065570.77gold quality
hypothalamusUBERON:000189869.04gold quality
cingulate cortexUBERON:000302767.81gold quality
anterior cingulate cortexUBERON:000983567.80gold quality
amygdalaUBERON:000187667.06gold quality
pancreatic ductal cellCL:000207966.98silver quality
descending thoracic aortaUBERON:000234565.96gold quality
nucleus accumbensUBERON:000188264.05gold quality
right frontal lobeUBERON:000281063.47gold quality
caudate nucleusUBERON:000187363.23gold quality
thoracic aortaUBERON:000151563.02gold quality
ascending aortaUBERON:000149662.80gold quality
primordial germ cell in gonadCL:0000670 ∩ UBERON:000099161.34gold quality
forebrainUBERON:000189060.96gold quality
gluteal muscleUBERON:000200060.51gold quality
triceps brachiiUBERON:000150960.43gold quality
substantia nigraUBERON:000203860.43gold quality
cerebellar hemisphereUBERON:000224560.24gold quality
cerebellar cortexUBERON:000212960.15gold quality
putamenUBERON:000187460.10gold quality
brainUBERON:000095560.07gold quality
right hemisphere of cerebellumUBERON:001489060.06gold quality
gall bladderUBERON:000211059.39gold quality
cerebellumUBERON:000203758.78gold quality
dorsolateral prefrontal cortexUBERON:000983458.75gold quality
C1 segment of cervical spinal cordUBERON:000646958.54gold quality
midbrainUBERON:000189158.29gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

ExperimentMarker?Max mean expression
E-ANND-3yes2.92

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): AHR, AP1, APEX1, AR, BCL6, BMAL1, CEBPB, CXXC1, EGR1, ELF1, EPAS1, ESR1, EZH2, FOXP3, HAND1, HIF3A, HOXA10, ID1, IRF1, JUN, JUNB, KDM5B, KMT2B, MYC, NR2C1, NRG1, PAX3, POU1F1, PRDM1, PROX1, RARA, SNAI1, SPI1, SRY, TCF3, TFAM, TFCP2, THRB, TP53, WT1

miRNA regulators (miRDB)

20 targeting GHRHR, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-450099.9972.722367
HSA-MIR-569699.9872.364487
HSA-MIR-22-3P99.9368.13917
HSA-MIR-1255A99.7468.09744
HSA-MIR-1255B-5P99.7468.16741
HSA-MIR-6861-3P99.6068.46444
HSA-MIR-6513-3P99.5969.771102
HSA-MIR-3678-3P99.3167.101432
HSA-MIR-664A-3P99.2271.082696
HSA-MIR-140-3P99.0467.691324
HSA-MIR-1199-5P98.4466.51829
HSA-MIR-6751-3P98.4466.35835
HSA-MIR-211-3P98.1466.771052
HSA-MIR-425797.8668.051190
HSA-MIR-379-5P97.5267.81485
HSA-MIR-3529-5P97.1267.06440
HSA-MIR-6772-3P97.0465.89784
HSA-MIR-874-5P96.9363.921014
HSA-MIR-570296.6868.21958
HSA-MIR-426894.4564.09819

Literature-anchored findings (GeneRIF, showing 40)

  • To ascertain whether (splice variant) SV1 mediates mitogenic effects on nonpituitary tissues, we expressed SV1 in 3T3 mouse fibroblasts and studied the properties of the transfected cells (PMID:11773624)
  • results demonstrate that mutations in the GHRHR are not limited to the coding sequence and that promoter mutations that impair Pit-1 binding can reduce expression of the GHRHR gene (PMID:11875102)
  • human GHRHR isoforms are found in experimental prostate neoplasms in mice; this could explain the effects of GHRH antagonists on growth of prostate cancer (PMID:12126741)
  • expression of mRNA and splice variants of this receptor in human malignant bone tumors (PMID:12220726)
  • an examination of the possible clinical significance of a polymorphism in the gene of this receptor: involvement in acromegaly (PMID:12220735)
  • presence of GHRH and its tumoral receptor splice variants in prostate cancers suggests the possible existence of an autocrine mitogenic loop (PMID:12364462)
  • mutations in the GHRH receptor gene make abnormalities of this gene one of the most common causes of of isolated growth hormone deficiency–REVIEW (PMID:12424433)
  • Compound heterozygotes for two previously undescribed mutations in the GHRHR that are predicted to cause complete lack of functional GHRHR protein: a nonsense mutation in codon 43 (Q43X), and a splice mutation at the beginning of intron 3 (IVS3+1G–>A). (PMID:12444890)
  • GHRH receptor may be associated with carcinogenesis (PMID:12867592)
  • autocrine stimulatory loop between GHRH and SV1 variant of GHRH receptor in primary cancers. (PMID:15362970)
  • GHRH-R was demonstrated in prostate and breast carcinomas, opening a variety of possibilities for the use of GHRH antagonists in the treatment of prostatic and mammary tumors. (PMID:15944917)
  • analysis of receptors for growth hormone-releasing hormone in human osteosarcomas and Ewing’s sarcomas (PMID:16820890)
  • Heterozygosity for a null GHRHR mutation is not associated with reduction in adult stature or in serum IGF-I but is associated with changes in body composition and possibly an increase in insulin sensitivity (PMID:17356054)
  • Size of individual abdominal organs is influenced in different ways by severe and congenital lack of GH due to a GHRH-R mutation. (PMID:18034778)
  • the expression of GHRH and its tumoral receptor SV1 in primary human melanomas and dysplastic nevi by immunohistochemistry. None of the specimens tested expressed GHRH (PMID:18255167)
  • targeting the GHRH receptor may be a therapeutic option in Triple-negative breast cancers (PMID:18629632)
  • Genetic screening of GH1 and GHRHR mutations in a Dutch population with isolated GH deficiency (IGHD). (PMID:18785993)
  • Gsp mutations up-regulate GHRHR mRNA expression in GH-secreting pituitary adenoma cells & desensitize the adenoma cells to GHRH in terms of their GHRHR mRNA expression. (PMID:19029774)
  • GHRHR might be one of the most important genes so far identified affecting normal variation in human height. (PMID:19209235)
  • The endometriotic stromal cells (ESCs) and transformed human ESCs, but not normal endometrial tissues, expressed GHRH-R mRNA. (PMID:19524226)
  • Mutations in GH1 and GHRHR were identified in 41 patients from 21 pedigrees, representing 11.1% of our cohort with a higher prevalence of mutations in familial cases (38.6%) and in consanguineous pedigrees (75%) of congenital growth hormone deficiency. (PMID:19567534)
  • Common variants of the GNRH1 and GNRHR genes are not associated with risk of invasive breast cancer in Caucasians (PMID:19640273)
  • These results provide strong evidence that the splicing mutation IVS8+1G>A of growth hormone-releasing hormone receptor is a cause of pituitary dwarfism in the Chinese family. (PMID:19733620)
  • These results show, for the first time, the activation of the MAPKs cascade by the splic variant (SV1) receptor. (PMID:19897610)
  • Longevity in untreated congenital growth hormone deficiency due to a homozygous mutation in the GHRH receptor gene. (PMID:19965916)
  • This chapter reviews the biology of the GHRHR, the mutations that affect its gene and their effects in homozygous and heterozygous individuals. (PMID:20374725)
  • The homozygous GHRHR mutation was rare, being detected in only one Japanese isolated GH deficiency family. (PMID:21044116)
  • study describes a new frame shift mutation in the coding sequence of exon 4 (corresponding to the extracellular domain of the receptor)(c.391delG) in the GHRHR in a family with isolated GH deficiency (PMID:21816782)
  • bone quality and metabolism and its correlation with insulin sensitivity in subjects heterozygous for a null mutation in GHRHR (PMID:21995288)
  • GHRH-R and Hsp90 were found to be independent predictive factors of histopathological response to neoadjuvant RCT. (PMID:22160161)
  • The study established the GHRHR gene sequence variation map in isolated severe growth hormone deficiency patients and normal adult height. (PMID:22489751)
  • We report a novel splice-disrupting mutation in GHRHR in 2 siblings and provide evidence that all c.57+1G>A (IVS1+1G>A) mutant chromosomes have the same haplotype ancestor (PMID:23052699)
  • Compound heterozygous mutations of the growth hormone-releasing hormone receptor gene is associated with isolated growth hormone deficiency (PMID:23602557)
  • we present the results of screening for mutations in GH1 and GHRHR genes in a large cohort of Argentinian patients with IGHD. These suggest that the p.Arg183His mutation associated with the type II dominant form of IGHD might be relatively common. (PMID:23789946)
  • Genu valgum was more prevalent in growth hormone deficiency GHRHR mutation patients than controls. (PMID:24057284)
  • These preliminary results suggest a greater than average GHRH-R expression in invasive lobular carcinomas and invasive ductal carcinomas associated with casting-type calcifications on the mammogram. (PMID:24479854)
  • Indel mutation in the growth hormone releasing hormone receptor gene is associated with isolated growth hormone deficiency. (PMID:25153028)
  • Identification of new missense mutations and an insertion mutation for the GHRHR gene in patients with isolated growth hormone deficiency. (PMID:25541890)
  • we found that pGHRH-R and its main splice variant are expressed in thyroid tissue and was upregulated in tumor cells compared to normal thyroid cells (PMID:25752763)
  • A reduced stature in older subjects heterozygous for the c.57+1G>A GHRHR mutation, indicating different effects of heterozygosis through lifespan. (PMID:25761575)

Cross-species orthologs

3 orthologs

OrganismSymbolGene ID
danio_rerioghrhrlENSDARG00000095788
mus_musculusGhrhrENSMUSG00000004654
rattus_norvegicusGhrhrENSRNOG00000011808

Paralogs (42): CALCR (ENSG00000004948), GIPR (ENSG00000010310), ADGRA2 (ENSG00000020181), CALCRL (ENSG00000064989), GLP2R (ENSG00000065325), ADGRF5 (ENSG00000069122), ADGRL1 (ENSG00000072071), ADCYAP1R1 (ENSG00000078549), SCTR (ENSG00000080293), VIPR2 (ENSG00000106018), CRHR2 (ENSG00000106113), ADGRD1 (ENSG00000111452), GLP1R (ENSG00000112164), ADGRG6 (ENSG00000112414), VIPR1 (ENSG00000114812), ADGRL2 (ENSG00000117114), CRHR1 (ENSG00000120088), ADGRB2 (ENSG00000121753), ADGRE5 (ENSG00000123146), ADGRE2 (ENSG00000127507), ADGRE3 (ENSG00000131355), ADGRB3 (ENSG00000135298), PTH2R (ENSG00000144407), ADGRG7 (ENSG00000144820), ADGRL3 (ENSG00000150471), ADGRA3 (ENSG00000152990), ADGRF1 (ENSG00000153292), ADGRF4 (ENSG00000153294), ADGRG4 (ENSG00000156920), ADGRG5 (ENSG00000159618), PTH1R (ENSG00000160801), ADGRL4 (ENSG00000162618), EVA1C (ENSG00000166979), ADGRF3 (ENSG00000173567), ADGRG2 (ENSG00000173698), ADGRE1 (ENSG00000174837), ADGRD2 (ENSG00000180264), ADGRB1 (ENSG00000181790), ADGRG3 (ENSG00000182885), ADGRA1 (ENSG00000197177)

Protein

Protein identifiers

Growth hormone-releasing hormone receptorQ02643 (reviewed: Q02643)

Alternative names: Growth hormone-releasing factor receptor

All UniProt accessions (6): Q02643, A0A090N8Y6, Q9HB42, Q9HB43, Q9HB44, Q9HB45

UniProt curated annotations — full annotation on UniProt →

Function. Receptor for GRF, coupled to G proteins which activate adenylyl cyclase. Stimulates somatotroph cell growth, growth hormone gene transcription and growth hormone secretion.

Subcellular location. Cell membrane.

Tissue specificity. Pituitary gland.

Disease relevance. Growth hormone deficiency, isolated, 4 (IGHD4) [MIM:618157] An autosomal recessive deficiency of growth hormone leading to early and severe growth failure and short stature. Patients have low but detectable levels of growth hormone, significantly retarded bone age, and a positive response and immunologic tolerance to growth hormone therapy. The disease is caused by variants affecting the gene represented in this entry.

Similarity. Belongs to the G-protein coupled receptor 2 family.

RefSeq proteins (1): NP_000814* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR000832GPCR_2_secretin-likeFamily
IPR001879GPCR_2_extracellular_domDomain
IPR003288GPCR_2_GHRH_rcptFamily
IPR017981GPCR_2-like_7TMDomain
IPR017983GPCR_2_secretin-like_CSConserved_site
IPR036445GPCR_2_extracell_dom_sfHomologous_superfamily
IPR050332GPCR_2Family

Pfam: PF00002, PF02793

UniProt features (57 total): helix 17, sequence variant 11, topological domain 8, transmembrane region 7, strand 7, disulfide bond 3, signal peptide 1, chain 1, glycosylation site 1, sequence conflict 1

Structure

Experimental structures (PDB)

2 structures.

PDBMethodResolution (Å)
2XDGX-RAY DIFFRACTION1.95
7CZ5ELECTRON MICROSCOPY2.6

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-Q02643-F175.890.26

Antibody-complex structures (SAbDab): 17CZ5

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Disulfide bonds (3): 41–64, 55–96, 78–112

Glycosylation sites (1): 50

Function

Pathways and Gene Ontology

Reactome pathways

2 pathways

IDPathway
R-HSA-418555G alpha (s) signalling events
R-HSA-420092Glucagon-type ligand receptors

MSigDB gene sets: 218 (showing top): GOBP_CIRCADIAN_RHYTHM, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS, GOBP_BEHAVIOR, YAGI_AML_WITH_INV_16_TRANSLOCATION, GOBP_CELLULAR_RESPONSE_TO_LIPID, GOCC_SECRETORY_GRANULE, GOBP_REGULATION_OF_DEVELOPMENTAL_GROWTH, GOBP_RESPONSE_TO_CORTICOSTEROID, MODULE_64, GOBP_CELLULAR_RESPONSE_TO_CARBOHYDRATE_STIMULUS, GOBP_GROWTH, GOBP_REGULATION_OF_HORMONE_LEVELS, GOCC_CELL_SURFACE, GOBP_HORMONE_TRANSPORT

GO Biological Process (29): cell surface receptor signaling pathway (GO:0007166), adenylate cyclase-activating G protein-coupled receptor signaling pathway (GO:0007189), lactation (GO:0007595), positive regulation of cell population proliferation (GO:0008284), determination of adult lifespan (GO:0008340), growth hormone secretion (GO:0030252), response to insulin (GO:0032868), cellular response to insulin stimulus (GO:0032869), regulation of intracellular steroid hormone receptor signaling pathway (GO:0033143), positive regulation of multicellular organism growth (GO:0040018), hormone metabolic process (GO:0042445), positive regulation of insulin-like growth factor receptor signaling pathway (GO:0043568), response to estrogen (GO:0043627), positive regulation of circadian sleep/wake cycle, non-REM sleep (GO:0046010), cell maturation (GO:0048469), regulation of protein metabolic process (GO:0051246), response to glucocorticoid (GO:0051384), establishment of localization in cell (GO:0051649), positive regulation of growth hormone secretion (GO:0060124), somatotropin secreting cell development (GO:0060133), cellular response to glucose stimulus (GO:0071333), cAMP/PKA signal transduction (GO:0141156), signal transduction (GO:0007165), G protein-coupled receptor signaling pathway (GO:0007186), adenohypophysis development (GO:0021984), mammary gland development (GO:0030879), regulation of insulin-like growth factor receptor signaling pathway (GO:0043567), hormone secretion (GO:0046879), positive regulation of hormone secretion (GO:0046887)

GO Molecular Function (7): G protein-coupled receptor activity (GO:0004930), G protein-coupled peptide receptor activity (GO:0008528), growth hormone-releasing hormone receptor activity (GO:0016520), peptide hormone binding (GO:0017046), growth factor binding (GO:0019838), transmembrane signaling receptor activity (GO:0004888), protein binding (GO:0005515)

GO Cellular Component (9): nuclear inner membrane (GO:0005637), nuclear outer membrane (GO:0005640), cytoplasm (GO:0005737), plasma membrane (GO:0005886), cell surface (GO:0009986), membrane (GO:0016020), nuclear matrix (GO:0016363), secretory granule (GO:0030141), sarcolemma (GO:0042383)

Reactome top-level categories

Rollup of top-2 pathways:

CategoryPathways
GPCR downstream signalling1
Class B/2 (Secretin family receptors)1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
cellular anatomical structure4
cell development2
G protein-coupled receptor activity2
nuclear membrane2
signal transduction1
adenylate cyclase-modulating G protein-coupled receptor signaling pathway1
adenylate cyclase activator activity1
body fluid secretion1
mammary gland development1
milk ejection reflex1
cell population proliferation1
regulation of cell population proliferation1
positive regulation of cellular process1
multicellular organismal process1
peptide hormone secretion1
response to peptide hormone1
response to insulin1
cellular response to peptide hormone stimulus1
nuclear receptor-mediated steroid hormone signaling pathway1
regulation of intracellular signal transduction1
multicellular organism growth1
regulation of multicellular organism growth1
positive regulation of developmental growth1
positive regulation of multicellular organismal process1
metabolic process1
regulation of hormone levels1
positive regulation of signal transduction1
regulation of insulin-like growth factor receptor signaling pathway1
insulin-like growth factor receptor signaling pathway1
response to hormone1
circadian sleep/wake cycle, non-REM sleep1
regulation of circadian sleep/wake cycle, non-REM sleep1
positive regulation of circadian sleep/wake cycle, sleep1
cellular developmental process1
anatomical structure maturation1
protein metabolic process1
regulation of macromolecule metabolic process1
regulation of primary metabolic process1
response to corticosteroid1
establishment of localization1

Protein interactions and networks

STRING

926 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
GHRHRGHRHP01286999
GHRHRPROP1O75360916
GHRHRGH1P01241909
GHRHRGHSRQ92847888
GHRHRPOU1F1P28069869
GHRHRGHRP10912843
GHRHRPRLP01236833
GHRHRIGF1P01343821
GHRHRGHRLQ9UBU3798
GHRHRA6NFB4A6NFB4785
GHRHRCSH1P01243774
GHRHRGNRHRP30968771
GHRHRCSH1P01243758
GHRHRSSTP01166720
GHRHRFSHBP01225700

IntAct

119 interactions, top by confidence:

ABTypeScore
GHRHRSNX27psi-mi:“MI:0407”(direct interaction)0.440
GHRHRPDZD2psi-mi:“MI:0407”(direct interaction)0.440
GHRHRPDZD7psi-mi:“MI:0407”(direct interaction)0.440
GHRHRARHGEF12psi-mi:“MI:0407”(direct interaction)0.440
GHRHRSCRIBpsi-mi:“MI:0407”(direct interaction)0.440
GHRHRGRID2IPpsi-mi:“MI:0407”(direct interaction)0.440
GHRHRMAGI2psi-mi:“MI:0407”(direct interaction)0.440
GHRHRNHERF4psi-mi:“MI:0407”(direct interaction)0.440
TAMALINGHRHRpsi-mi:“MI:0407”(direct interaction)0.440
GHRHRHTRA3psi-mi:“MI:0407”(direct interaction)0.440
GHRHRARHGEF11psi-mi:“MI:0407”(direct interaction)0.440
GHRHRMAST2psi-mi:“MI:0407”(direct interaction)0.440
GHRHRDLG3psi-mi:“MI:0407”(direct interaction)0.440
GHRHRWHRNpsi-mi:“MI:0407”(direct interaction)0.440
GHRHRPATJpsi-mi:“MI:0407”(direct interaction)0.440
GHRHRRHPN1psi-mi:“MI:0407”(direct interaction)0.440
GHRHRPDZK1psi-mi:“MI:0407”(direct interaction)0.440
APBA3GHRHRpsi-mi:“MI:0407”(direct interaction)0.440
GHRHRMAST1psi-mi:“MI:0407”(direct interaction)0.440
GHRHRTIAM2psi-mi:“MI:0407”(direct interaction)0.440
GHRHRPDZRN4psi-mi:“MI:0407”(direct interaction)0.440
GHRHRGIPC2psi-mi:“MI:0407”(direct interaction)0.440
GHRHRMPDZpsi-mi:“MI:0407”(direct interaction)0.440
GHRHRLIN7Apsi-mi:“MI:0407”(direct interaction)0.440
GHRHRSNTG2psi-mi:“MI:0407”(direct interaction)0.440
GHRHRDLG4psi-mi:“MI:0407”(direct interaction)0.440
GHRHRNHERF2psi-mi:“MI:0407”(direct interaction)0.440
GHRHRPTPN13psi-mi:“MI:0407”(direct interaction)0.440

BioGRID (2): GHRHR (Affinity Capture-MS), GHRH (Reconstituted Complex)

ESM2 similar proteins: A0A2Z2U4G9, O35659, O46502, O95838, P23811, P25107, P25117, P25961, P30082, P30083, P30988, P32082, P32214, P32215, P32241, P32301, P34999, P35000, P41587, P41588, P41593, P43218, P43219, P43220, P47871, P47872, P48546, P49190, P50133, P51839, P70555, P79222, P97751, Q02643, Q02644, Q03431, Q0P543, Q1LZF7, Q28992, Q29627

Diamond homologs: A0A2Z2U4G9, A6QP74, O35659, O42602, O42603, O46502, O62772, O95838, P23811, P25107, P25117, P25961, P30082, P30083, P32082, P32215, P32241, P32301, P34998, P34999, P35000, P35347, P35353, P41586, P41587, P41588, P41593, P43218, P43219, P43220, P47866, P47871, P47872, P48546, P48960, P49190, P50133, P70205, P70555, P97751

SIGNOR signaling

0 interactions.

Enriched among interaction partners

Reactome pathways and GO biological processes over-represented among this gene’s 75 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.

Reactome pathways:

PathwayPartnersFoldFDR
Ras activation upon Ca2+ influx through NMDA receptor559.5×9e-07
Unblocking of NMDA receptors, glutamate binding and activation556.6×9e-07
Negative regulation of NMDA receptor-mediated neuronal transmission556.6×9e-07
Long-term potentiation549.6×1e-06
Assembly and cell surface presentation of NMDA receptors947.6×3e-11
Neurexins and neuroligins936.9×2e-10
Protein-protein interactions at synapses527.7×3e-05
RHOA GTPase cycle57.8×4e-03

GO biological processes:

GO termPartnersFoldFDR
establishment or maintenance of epithelial cell apical/basal polarity1188.8×6e-17
receptor clustering760.7×4e-09
protein localization to synapse553.2×2e-06
regulation of postsynaptic membrane neurotransmitter receptor levels748.2×2e-08
cell-cell adhesion912.7×2e-06
protein-containing complex assembly812.7×1e-05
regulation of small GTPase mediated signal transduction510.0×4e-03
protein localization to plasma membrane57.5×1e-02

Disease & clinical

Clinical variants and AI predictions

ClinVar

344 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic25
Likely pathogenic11
Uncertain significance123
Likely benign119
Benign39

Top pathogenic / likely-pathogenic (30)

Variant IDHGVSClassification
1012249NM_000823.4(GHRHR):c.1102C>T (p.Gln368Ter)Pathogenic
1064692NM_000823.4(GHRHR):c.967C>T (p.Gln323Ter)Pathogenic
1322999NM_000823.4(GHRHR):c.1069C>T (p.Arg357Cys)Pathogenic
1449976NM_000823.4(GHRHR):c.280C>T (p.Arg94Trp)Pathogenic
1459534NM_000823.4(GHRHR):c.22dup (p.Ala8fs)Pathogenic
15989NM_000823.4(GHRHR):c.214G>T (p.Glu72Ter)Pathogenic
15990NM_000823.4(GHRHR):c.57+1G>APathogenic
15992NM_000823.4(GHRHR):c.725T>G (p.Phe242Cys)Pathogenic
15993NM_000823.4(GHRHR):c.665C>A (p.Ala222Glu)Pathogenic
15994NM_000823.4(GHRHR):c.985A>G (p.Lys329Glu)Pathogenic
15995NC_000007.14:g.30963945A>CPathogenic
2418946NC_000007.14:g.30969869dupPathogenic
265396NM_000823.4(GHRHR):c.1089_1093del (p.Leu364fs)Pathogenic
2719597NM_000823.4(GHRHR):c.290del (p.Thr97fs)Pathogenic
2811869NM_000823.4(GHRHR):c.461_462del (p.Leu154fs)Pathogenic
3026388NM_000823.4(GHRHR):c.160+1G>TPathogenic
3616306NM_000823.4(GHRHR):c.22del (p.Ala8fs)Pathogenic
3697787NM_000823.4(GHRHR):c.848G>A (p.Trp283Ter)Pathogenic
3720730NM_000823.4(GHRHR):c.1146G>A (p.Glu382=)Pathogenic
4281667NM_000823.4(GHRHR):c.367-1G>APathogenic
4725915NM_000823.4(GHRHR):c.675_676del (p.Tyr226fs)Pathogenic
56966NC_000007.14:g.30959635_30967328delinsAGAGATCCAPathogenic
597306NM_000823.4(GHRHR):c.194G>A (p.Trp65Ter)Pathogenic
626257NC_000007.14:g.31008681G>TPathogenic
998031NM_000823.4(GHRHR):c.731G>A (p.Trp244Ter)Pathogenic
161435NM_000823.4(GHRHR):c.418T>C (p.Ser140Pro)Likely pathogenic
161437NM_000823.4(GHRHR):c.495C>A (p.His165Gln)Likely pathogenic
1693449NM_000823.4(GHRHR):c.527C>T (p.Ala176Val)Likely pathogenic
2440458NM_000823.4(GHRHR):c.260C>A (p.Ser87Ter)Likely pathogenic
3339202NM_000823.4(GHRHR):c.847T>C (p.Trp283Arg)Likely pathogenic

SpliceAI

2220 predictions. Top by Δscore:

VariantEffectΔscore
7:30972096:G:GGdonor_gain1.0000
7:30974105:A:Tdonor_gain1.0000
7:30974490:G:GGdonor_gain1.0000
7:30974585:G:GTdonor_gain1.0000
7:30975116:G:GTdonor_gain1.0000
7:30975117:A:Tdonor_gain1.0000
7:30975131:GC:Gdonor_gain1.0000
7:30964122:GACC:Gdonor_gain0.9900
7:30964126:G:GGdonor_gain0.9900
7:30971115:CCAG:Cacceptor_loss0.9900
7:30971116:CA:Cacceptor_loss0.9900
7:30971118:G:GTacceptor_loss0.9900
7:30971212:CTCAG:Cdonor_loss0.9900
7:30971213:TCAG:Tdonor_loss0.9900
7:30971214:CAGGT:Cdonor_loss0.9900
7:30971215:AGGTT:Adonor_loss0.9900
7:30971216:G:GAdonor_loss0.9900
7:30971217:G:Tdonor_loss0.9900
7:30971218:T:Gdonor_loss0.9900
7:30972102:GCCA:Gdonor_gain0.9900
7:30974488:GC:Gdonor_gain0.9900
7:30974579:G:Tdonor_gain0.9900
7:30974595:G:Tdonor_gain0.9900
7:30975863:G:GGdonor_gain0.9900
7:30976084:A:Gdonor_gain0.9900
7:30976428:GGC:Gacceptor_gain0.9900
7:30976554:TCCAG:Tdonor_loss0.9900
7:30976555:CCAG:Cdonor_loss0.9900
7:30976556:CAGGT:Cdonor_loss0.9900
7:30976557:AGGT:Adonor_loss0.9900

AlphaMissense

2753 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
7:30969097:G:CW65C0.996
7:30969097:G:TW65C0.996
7:30969901:G:CW101C0.996
7:30969901:G:TW101C0.996
7:30969079:G:CW59C0.993
7:30969079:G:TW59C0.993
7:30974977:G:CW273C0.992
7:30974977:G:TW273C0.992
7:30969879:G:CR94P0.991
7:30969899:T:AW101R0.989
7:30969899:T:CW101R0.989
7:30969884:T:AC96S0.988
7:30969885:G:CC96S0.988
7:30969932:T:AC112S0.987
7:30969933:G:CC112S0.987
7:30977281:G:CG369R0.987
7:30974036:T:CF217L0.985
7:30974038:C:AF217L0.985
7:30974038:C:GF217L0.985
7:30969932:T:CC112R0.984
7:30969095:T:AW65R0.982
7:30969095:T:CW65R0.982
7:30969134:T:AC78S0.982
7:30969135:G:CC78S0.982
7:30969886:T:GC96W0.982
7:30974042:T:AW219R0.982
7:30974042:T:CW219R0.982
7:30974135:T:AW250R0.981
7:30974135:T:CW250R0.981
7:30972003:T:CF169L0.980

dbSNP variants (sampled 300 via entrez): RS1000183830 (7:30972775 T>C), RS1000200624 (7:30966696 A>G), RS1000301392 (7:30978294 G>A,T), RS1000810563 (7:30978296 G>A,T), RS1000936639 (7:30967771 C>T), RS1000986556 (7:30963510 A>T), RS1001017625 (7:30963203 C>G), RS1001067010 (7:30967981 A>G), RS1001090446 (7:30968109 C>A,G,T), RS1001176311 (7:30979355 C>A,T), RS1001179931 (7:30971526 C>T), RS1001211138 (7:30971157 G>A), RS1001411091 (7:30976999 T>C), RS1001603909 (7:30962686 C>T), RS1001841226 (7:30976721 T>C)

Disease associations

OMIM: gene MIM:139191 | disease phenotypes: MIM:618157, MIM:612781

GenCC curated gene-disease

DiseaseClassificationInheritance
isolated growth hormone deficiency type IBDefinitiveAutosomal recessive
isolated growth hormone deficiency, type 4StrongAutosomal recessive

Mondo (3): isolated growth hormone deficiency, type 4 (MONDO:0032567), isolated growth hormone deficiency type IB (MONDO:0013006), disorder of sexual differentiation (MONDO:0002145)

Orphanet (4): Isolated growth hormone deficiency type IV (Orphanet:684247), Isolated growth hormone deficiency type IB (Orphanet:231671), Non-acquired isolated growth hormone deficiency (Orphanet:631), Difference of sex development (Orphanet:90771)

HPO phenotypes

7 total (7 of 7 shown, HPO-id order):

HPOTerm
HP:0000007Autosomal recessive inheritance
HP:0000824Decreased response to growth hormone stimulation test
HP:0002750Delayed skeletal maturation
HP:0003510Severe short stature
HP:0010627Anterior pituitary hypoplasia
HP:0030353Decreased circulating serum insulin-like growth factor 1 concentration
HP:0031079Impaired growth-hormone response to insulin stimulation test

GWAS associations

1 associations (top):

StudyTraitp-value
GCST012048_9Triglyceride levels8.000000e-07

EFO canonical traits (1, from GWAS)

EFO IDTrait name
EFO:0004530triglyceride measurement

MeSH disease descriptors (2)

DescriptorNameTree numbers
D012734Disorders of Sex DevelopmentC12.050.351.875.253; C12.200.706.316; C12.800.316; C16.131.939.316; C19.391.119
C567564Isolated Growth Hormone Deficiency, Type IB (supp.)

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL2032 (SINGLE PROTEIN)

Molecules with ChEMBL bioactivity

1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 1,009 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

MoleculeNamePhasePatents
CHEMBL3545252DOCETAXEL41,009

PharmGKB: 1 entry (VIP=true, CPIC=false)

GtoPdb / IUPHAR curated pharmacology

(IUPHAR/BPS Guide to Pharmacology — expert-curated)

Target class: gpcr — Glucagon receptor family

Most potent curated ligand interactions (25 total), top 25:

LigandActionAffinityParameter
JV-1-36Antagonist10.41pKi
JV-1-37Antagonist10.4pKi
JV-1-40Antagonist10.4pKi
JV-1-41Antagonist10.4pKi
JV-1-42Antagonist10.4pKi
JV-1-43Antagonist10.4pKi
MZ-4-169Antagonist10.4pKi
MZ-4-243Antagonist10.4pKi
JV-1-10Antagonist10.3pKi
MZ-4-181Antagonist10.3pKi
JV-1-62Antagonist10.2pKi
JV-1-63Antagonist10.2pKi
MZ-5-156Antagonist10.2pKi
MZ-5-192Antagonist10.2pIC50
MZ-5-78Antagonist10.2pIC50
MZ-6-55Antagonist10.2pKi
JV-1-38Antagonist10.1pKi
JV-1-39Antagonist10.1pKi
MZ-4-71Antagonist9.9pKi
JMR-132Agonist9.85pIC50
GHRH-(1-29)-NH2 (rat)Full agonist9.1pIC50
[Ac-Tyr1, D-Arg2]GHRH-(1-29)-NH2 (human)Antagonist8.5pKi
GHRH-(1-29)-NH2 (human)Full agonist8.2pIC50
GHRH-(1-29)-OH (human)Full agonist8.0pIC50
[125I]GHRH (human)Full agonist7.6pKd

ChEMBL bioactivities

1 potent at pChembl≥5 of 1 total, top 1 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
9.85IC500.14nMDOCETAXEL

PubChem BioAssay actives

1 with measured affinity, of 1 total; 1 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
[(1S,2S,3R,4S,7R,9S,10S,12R,15S)-4-acetyloxy-1,9,12-trihydroxy-15-[(2R,3S)-2-hydroxy-3-[(2-methylpropan-2-yl)oxycarbonylamino]-3-phenylpropanoyl]oxy-10,14,17,17-tetramethyl-11-oxo-6-oxatetracyclo[11.3.1.03,10.04,7]heptadec-13-en-2-yl] benzoate;trihydrate329118: Displacement of [125I]JV1-42 from GHRH receptor expressed in human MX1 cellsic500.0001uM

CTD chemical–gene interactions

14 total (human), top 14 by PubMed support.

ChemicalActions (top 5)PubMed papers
Benzo(a)pyreneaffects methylation, decreases expression2
sodium arseniteincreases expression1
butyraldehydedecreases expression1
tebuconazoledecreases expression1
CGP 52608affects binding, increases reaction1
clothianidinincreases expression1
MZ-J-7-118affects binding, decreases activity1
Cadmiumdecreases expression, increases abundance1
Estradiolaffects binding, increases expression1
Folic Aciddecreases expression1
Phosphorusdecreases expression1
Cadmium Chloridedecreases expression, increases abundance1
Okadaic Aciddecreases expression1
Raloxifene Hydrochlorideaffects response to substance1

ChEMBL screening assays

3 unique, capped per target: 3 binding

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL4883384BindingPRESTO-Tango GPCRome screening (GHRHR)Data for DCP probe UCSF924

Cellosaurus cell lines

2 cell lines: 1 transformed cell line, 1 spontaneously immortalized cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_H369293/GHRH/Galpha15Transformed cell lineFemale
CVCL_KV22cAMP Hunter CHO-K1 GHRHR GsSpontaneously immortalized cell lineFemale

Clinical trials (associated diseases)

12 trials via MONDO — disease-level, not drug-specific.

TrialPhaseStatusTitle
NCT03718234PHASE1COMPLETEDSubcutaneous Hydrocortisone Children With Congenital Adrenal Hyperplasia
NCT00485186Not specifiedWITHDRAWNGene Polymorphisms Influencing Steroid Synthesis and Action
NCT01875640Not specifiedCOMPLETEDDecision Support for Parents Receiving Information About Child’s Rare Disease
NCT02784184Not specifiedUNKNOWNCOPENHAGEN Minipuberty Study
NCT03102554Not specifiedENROLLING_BY_INVITATIONGenetics of Differences of Sex Development and Hypospadias
NCT03283852Not specifiedRECRUITINGIdentifying New Genetic Causes to Development Disorders
NCT04195490Not specifiedUNKNOWNEvaluation of Outcomes of Feminizing Genitoplasty in Children With Disorders of Sex Development
NCT04463316Not specifiedRECRUITINGGROWing Up With Rare GENEtic Syndromes
NCT04717349Not specifiedRECRUITINGData Collection Study of Pediatric and Adolescent Gynecology Conditions
NCT05058781Not specifiedRECRUITINGMinipuberty in Infants Born With Potential Hypogonadism Hypogonadotrope
NCT06692049Not specifiedRECRUITINGGonadal Tissue Cryopreservation for Fertility Preservation in Children with a Disorder of Sex Development
NCT06989593Not specifiedRECRUITINGBreaking Silence Through Story: A Narrative Medicine Intervention for Parents of Children With Urogenital Conditions