GHRL
geneOn this page
Also known as MTLRPghrelinobestatin
Summary
GHRL (ghrelin and obestatin prepropeptide, HGNC:18129) is a protein-coding gene on chromosome 3p25.3, encoding Appetite-regulating hormone (Q9UBU3). Precursor of the appetite-regulating peptide ghrelin, including ghrelin-27 and ghrelin-28.
This gene encodes the ghrelin-obestatin preproprotein that is cleaved to yield two peptides, ghrelin and obestatin. Ghrelin is a powerful appetite stimulant and plays an important role in energy homeostasis. Its secretion is initiated when the stomach is empty, whereupon it binds to the growth hormone secretagogue receptor in the hypothalamus which results in the secretion of growth hormone (somatotropin). Ghrelin is thought to regulate multiple activities, including hunger, reward perception via the mesolimbic pathway, gastric acid secretion, gastrointestinal motility, and pancreatic glucose-stimulated insulin secretion. It was initially proposed that obestatin plays an opposing role to ghrelin by promoting satiety and thus decreasing food intake, but this action is still debated. Recent reports suggest multiple metabolic roles for obestatin, including regulating adipocyte function and glucose metabolism. Alternative splicing results in multiple transcript variants. In addition, antisense transcripts for this gene have been identified and may potentially regulate ghrelin-obestatin preproprotein expression.
Source: NCBI Gene 51738 — RefSeq curated summary.
At a glance
- GWAS associations: 2
- Clinical variants (ClinVar): 31 total
- Phenotypes (HPO): 6
- Druggable target: yes
- MANE Select transcript:
NM_016362
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:18129 |
| Approved symbol | GHRL |
| Name | ghrelin and obestatin prepropeptide |
| Location | 3p25.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | MTLRP, ghrelin, obestatin |
| Ensembl gene | ENSG00000157017 |
| Ensembl biotype | protein_coding |
| OMIM | 605353 |
| Entrez | 51738 |
Gene structure
Transcript identifiers
Ensembl transcripts: 19 — 15 protein_coding, 3 protein_coding_CDS_not_defined, 1 retained_intron
ENST00000287656, ENST00000335542, ENST00000422159, ENST00000425479, ENST00000429122, ENST00000430179, ENST00000437422, ENST00000439975, ENST00000446937, ENST00000449238, ENST00000457360, ENST00000475759, ENST00000476283, ENST00000481287, ENST00000491589, ENST00000910666, ENST00000910668, ENST00000910670, ENST00000910671
RefSeq mRNA: 10 — MANE Select: NM_016362
NM_001134941, NM_001134944, NM_001134945, NM_001134946, NM_001302821, NM_001302822, NM_001302823, NM_001302824, NM_001302825, NM_016362
CCDS: CCDS33700, CCDS46747, CCDS46748, CCDS46749, CCDS46750
Canonical transcript exons
ENST00000335542 — 6 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001386954 | 10290073 | 10290209 |
| ENSE00001547498 | 10290716 | 10291451 |
| ENSE00001812025 | 10285666 | 10285894 |
| ENSE00002106906 | 10292842 | 10292947 |
| ENSE00003542562 | 10289762 | 10289878 |
| ENSE00003637018 | 10286704 | 10286812 |
Expression profiles
Bgee: expression breadth ubiquitous, 174 present calls, max score 98.31.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.5417 / max 72.6116, expressed in 154 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 41036 | 0.3812 | 117 |
| 41035 | 0.0985 | 30 |
| 41034 | 0.0621 | 10 |
Top tissues by expression
249 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| cardia of stomach | UBERON:0001162 | 98.31 | gold quality |
| body of stomach | UBERON:0001161 | 92.22 | gold quality |
| stomach | UBERON:0000945 | 91.85 | gold quality |
| epithelial cell of pancreas | CL:0000083 | 90.06 | silver quality |
| fundus of stomach | UBERON:0001160 | 89.13 | gold quality |
| bone marrow cell | CL:0002092 | 88.54 | gold quality |
| pancreatic ductal cell | CL:0002079 | 88.33 | silver quality |
| islet of Langerhans | UBERON:0000006 | 88.07 | gold quality |
| duodenum | UBERON:0002114 | 87.82 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 86.40 | gold quality |
| mammary duct | UBERON:0001765 | 84.30 | gold quality |
| epithelium of mammary gland | UBERON:0003244 | 84.15 | gold quality |
| nasal cavity epithelium | UBERON:0005384 | 83.66 | gold quality |
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 82.07 | gold quality |
| pancreas | UBERON:0001264 | 81.32 | gold quality |
| blood | UBERON:0000178 | 80.25 | gold quality |
| granulocyte | CL:0000094 | 80.21 | gold quality |
| sural nerve | UBERON:0015488 | 79.95 | gold quality |
| pylorus | UBERON:0001166 | 79.85 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 79.01 | gold quality |
| body of pancreas | UBERON:0001150 | 78.52 | gold quality |
| lymph node | UBERON:0000029 | 78.07 | gold quality |
| leukocyte | CL:0000738 | 77.48 | gold quality |
| monocyte | CL:0000576 | 77.44 | gold quality |
| myocardium | UBERON:0002349 | 77.29 | gold quality |
| upper arm skin | UBERON:0004263 | 76.69 | gold quality |
| bone marrow | UBERON:0002371 | 75.81 | gold quality |
| vermiform appendix | UBERON:0001154 | 75.59 | gold quality |
| sperm | CL:0000019 | 75.49 | gold quality |
| jejunal mucosa | UBERON:0000399 | 75.49 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-31 | yes | 134187.85 |
| E-MTAB-5061 | no | 43853.54 |
| E-ANND-3 | no | 2.16 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): ARX, ISL1, KLF4, NEUROD1, NKX2-2, POU1F1, USF1
miRNA regulators (miRDB)
5 targeting GHRL, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6758-5P | 100.00 | 66.21 | 1470 |
| HSA-MIR-6856-5P | 100.00 | 65.47 | 1298 |
| HSA-LET-7C-3P | 99.95 | 73.42 | 2862 |
| HSA-MIR-298 | 99.63 | 67.56 | 1916 |
| HSA-MIR-1281 | 92.96 | 65.73 | 260 |
Literature-anchored findings (GeneRIF, showing 40)
- ghrelin inhibited Akt kinase activity as well as up-regulated gluconeogenesis. These findings raise the possibility that ghrelin modulates insulin activities in humans (PMID:11724768)
- identification of missense variants and a frameshift mutation in extremely obese children and adolescents and healthy normal weight students (PMID:12050239)
- Elevated plasma levels in Prader Willi syndrome (PMID:12091883)
- Characterisation of gastric ghrelin cells in man and other mammals in adult and fetal tissues (PMID:12107501)
- expression of ghrelin in endocrine growths of the stomach and endocrine tumours of the pancreas, intestine and lung (PMID:12107502)
- patients with active acromegaly show low levels of circulating ghrelin that are not further reduced by oral glucose tolerance test (PMID:12153739)
- A variation in the ghrelin gene increases weight and decreases insulin secretion in tall, obese children. (PMID:12161552)
- ghrelin levels are decreased in polycystic ovary syndrome women and are highly correlated to the degree of insulin resistance (PMID:12364442)
- study shows that somatostatin and cortistatin strongly inhibit ghrelin secretion and inhibition persists even after stopping the infusion of SRIF or CST (PMID:12364482)
- Data suggest that the stomach is the major source of circulating ghrelin and that other tissues compensate for the loss of ghrelin production after gastrectomy. (PMID:12414809)
- plasma ghrelin and growth hormone levels are both reciprocally related with body mass index, but no causative relationship could be demonstrated between low ghrelin levels and the hyposomatropism in human obesity (PMID:12429880)
- ghrelin is increased in anorexia nervosa and constitutionally thin subjects who display very low BMI but different eating behaviors, suggesting that not only is ghrelin dependent on body fat mass, but it is also influenced by nutritional status (PMID:12519838)
- ghrelin levels in children with Prader-Willi syndrome are significantly elevated compared with BMI-matched obese controls; elevated levels may play a role as an orexigenic factor driving the insatiable appetite and obesity found in PWS (PMID:12519848)
- Ghrelin can bind to a species of high density lipoprotein associated with paraoxonase (PMID:12531885)
- Expressed in fetal thyroid tissue: expression affects thyroid tumor growth. (PMID:12547722)
- human ghrelin levels decrease by almost 50% under hyperinsulinemic euglycemic clamp conditions but constant lipid infusion failed to change plasma ghrelin (PMID:12553549)
- ghrelin-induced growth hormone secretion was severely blunted in patients with active Cushing’s syndrome, in addition to a remarkable hyper-response in ACTH and cortisol secretion (PMID:12566947)
- plasma levels are increased in lung cancer cachexia; increased ghrelin may represent a compensatory mechanism under catabolic-anabolic imbalance in cachectic patients with lung cancer (PMID:12576449)
- Helicobacter pylori has no effect on plasma ghrelin concentration (PMID:12656662)
- fat restriction avoids the increase in ghrelin levels caused by dietary energy restriction (PMID:12679442)
- plasma ghrelin increases after gastric bypass surgery in patients experiencing active weight loss (PMID:12679444)
- acute plasma ghrelin response to food intake, which in healthy individuals is independent of meal caloric value, is impaired in women with anorexia nervosa (PMID:12679456)
- lowered serum levels of ghrelin in active acromegaly rise with postsurgery normalization of growth hormone and insulin-like growth factor-I and improved insulin resistance but long-acting octreotide therapy persistently suppressed serum ghrelin levels (PMID:12727951)
- study showed that 1) ghrelin secretion is sexually dimorphic in humans with women in the late follicular stage having higher levels than men; 2) ghrelin secretion is suppressed by somatostatin; and 3) growth hormone has no influence over ghrelin secretion (PMID:12727973)
- ghrelin is a novel paracrine/autocrine factor that is involved in cross-talk between the endometrium and embryo during embryonal implantation (PMID:12727993)
- Cloning and characterization of the 5(’)-flanking region of the ghrelin gene. (PMID:12732215)
- hyperghrelinemia in anorectic patients is caused at least partly by increased secretion of active ghrelin and that glucose ingestion suppresses active ghrelin release in these patients. (PMID:12824869)
- insulin reduces plasma ghrelin in nondiabetic patients and, to a lesser extent, in type 2 diabetic patients before insulin therapy;findings indicate an indirect effect of insulin via ghrelin on the suppression of hunger sensation and appetite (PMID:12829648)
- the involvement of ghrelin in the autocrine-paracrine regulation of human adrenal growth (PMID:12851720)
- results suggest that both body mass index and the presence of binge-eating/purging may have some influence on fasting plasma ghrelin levels in patients with anorexia nervosa (PMID:12892652)
- ghrelin receptor is highly constitutively active and that this activity could be of physiological importance in its role as a regulator of both GH secretion and appetite control (PMID:12907757)
- Umbilical cord concentrations of ghrelin are similar in Caucasian and Asian newborns, suggesting that ghrelin does not cause differences in body composition and growth hormone metabolism in these neonates. (PMID:12931038)
- Low ghrelin associated with type 2 diabetes, insulin concentration, insulin resistance, and hypertension. Might have role in etiology of type 2 diabetes and regulation of blood pressure. The ghrelin Arg51Gln mutation associated with low plasma ghrelin. (PMID:14514639)
- Circulating levels of C-terminal pro-ghrelin peptides are altered in patients with cadiovascular diseases. (PMID:14521948)
- Reduced ghrelin, impaired growth hormone(GH) response to GHRH by excess FFA, and increased somatostatin tone contribute to reduced GH secretion in patients with HIV-lipodystrophy. (PMID:14559725)
- a low-dose i.v. glucose bolus reduces ghrelin both in controls and in type II diabetes mellitus subjects and therefore that early insulin response does not affect plasma ghrelin. (PMID:14585085)
- ghrelin may contribute to fetal and neonatal growth. (PMID:14602792)
- Plasma ghrelin changes were significantly associated with hunger changes so circulating ghrelin is differently suppressed by diet manipulations. (PMID:14602798)
- Type 1 diabetes is associted with abnormal ghrelin secretion (PMID:14614562)
- Insulin resistance is a major factor controlling ghrelin levels in subjects with and without nonalcoholic fatty liver disease. (PMID:14671152)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Ghrl | ENSMUSG00000064177 |
| rattus_norvegicus | Ghrl | ENSRNOG00000010349 |
Protein
Protein identifiers
Appetite-regulating hormone — Q9UBU3 (reviewed: Q9UBU3)
Alternative names: Growth hormone secretagogue, Growth hormone-releasing peptide, Motilin-related peptide, Protein M46
All UniProt accessions (3): Q9UBU3, A8DN24, E7ESW0
UniProt curated annotations — full annotation on UniProt →
Function. Precursor of the appetite-regulating peptide ghrelin, including ghrelin-27 and ghrelin-28. Ghrelin is the ligand for growth hormone secretagogue receptor type 1 (GHSR). Induces the release of growth hormone from the pituitary. Has an appetite-stimulating effect, induces adiposity and stimulates gastric acid secretion. Involved in growth regulation. Ghrelin is the ligand for growth hormone secretagogue receptor type 1 (GHSR). Octanoylated ghrelin-28 is the most commonly found ghrelin and octanoylation is essential for the activation of the growth hormone secretagogue receptor type 1 (GHSR). Induces the release of growth hormone from the pituitary. Has an appetite-stimulating effect, induces adiposity and stimulates gastric acid secretion. Involved in growth regulation. May be the ligand for GPR39. May have an appetite-reducing effect resulting in decreased food intake. May reduce gastric emptying activity and jejunal motility.
Subcellular location. Secreted.
Tissue specificity. Highest level in stomach. All forms are found in serum as well. Other tissues compensate for the loss of ghrelin synthesis in the stomach following gastrectomy.
Post-translational modifications. O-octanoylated by GOAT/MBOAT4. O-octanoylation or O-decanoylation is essential for ghrelin activity. The O-decanoylated forms Ghrelin-27-C10 and Ghrelin-28-C10 differ in the length of the carbon backbone of the carboxylic acid bound to Ser-26. A small fraction of ghrelin, ghrelin-28-C10:1, may be modified with a singly unsaturated carboxylic acid. Also O-acetylated and O-butyrylated on Ser-26 to minor levels. Amidation of Leu-98 is essential for obestatin activity.
Similarity. Belongs to the motilin family.
Isoforms (6)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q9UBU3-1 | 1, Ghrelin | yes |
| Q9UBU3-2 | 2, des-Gln14-ghrelin | |
| Q9UBU3-3 | 3 | |
| Q9UBU3-4 | 4 | |
| Q9UBU3-5 | 5 | |
| Q9UBU3-6 | 6 |
RefSeq proteins (10): NP_001128413, NP_001128416, NP_001128417, NP_001128418, NP_001289750, NP_001289751, NP_001289752, NP_001289753, NP_001289754, NP_057446* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR005441 | Preproghrelin | Family |
| IPR006737 | Motilin_assoc | Domain |
| IPR006738 | Motilin_ghrelin | Domain |
Pfam: PF04643, PF04644
UniProt features (19 total): splice variant 4, peptide 3, lipid moiety-binding region 3, sequence variant 2, propeptide 2, signal peptide 1, helix 1, region of interest 1, compositionally biased region 1, modified residue 1
Structure
Experimental structures (PDB)
4 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 7NA7 | ELECTRON MICROSCOPY | 2.7 |
| 7W2Z | ELECTRON MICROSCOPY | 2.8 |
| 7F9Y | ELECTRON MICROSCOPY | 2.9 |
| 6H3E | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9UBU3-F1 | 64.12 | 0.00 |
Antibody-complex structures (SAbDab): 3 — 7F9Y, 7NA7, 7W2Z
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (4): 26, 26, 98, 26
Function
Pathways and Gene Ontology
Reactome pathways
3 pathways
| ID | Pathway |
|---|---|
| R-HSA-375276 | Peptide ligand-binding receptors |
| R-HSA-416476 | G alpha (q) signalling events |
| R-HSA-422085 | Synthesis, secretion, and deacylation of Ghrelin |
MSigDB gene sets: 366 (showing top):
GOBP_CIRCADIAN_RHYTHM, GOBP_NEGATIVE_REGULATION_OF_EPITHELIAL_CELL_PROLIFERATION, GOBP_DENDRITE_DEVELOPMENT, GOBP_DIGESTION, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, GOBP_ACID_SECRETION, GOBP_BEHAVIOR, GOBP_RESPONSE_TO_ELECTRICAL_STIMULUS, GOBP_CARTILAGE_DEVELOPMENT, GOBP_CIRCULATORY_SYSTEM_PROCESS, GOBP_NEGATIVE_REGULATION_OF_INTERLEUKIN_1_PRODUCTION, GOBP_SKELETAL_SYSTEM_DEVELOPMENT, GOBP_INFLAMMATORY_RESPONSE, GOBP_SYNAPSE_ASSEMBLY, GOCC_SECRETORY_GRANULE
GO Biological Process (61): gastric acid secretion (GO:0001696), negative regulation of endothelial cell proliferation (GO:0001937), glucose metabolic process (GO:0006006), G protein-coupled receptor signaling pathway (GO:0007186), positive regulation of cytosolic calcium ion concentration (GO:0007204), synapse assembly (GO:0007416), actin polymerization or depolymerization (GO:0008154), adult feeding behavior (GO:0008343), response to hormone (GO:0009725), hormone-mediated signaling pathway (GO:0009755), dendrite development (GO:0016358), negative regulation of angiogenesis (GO:0016525), growth hormone secretion (GO:0030252), positive regulation of insulin secretion (GO:0032024), regulation of response to food (GO:0032095), positive regulation of appetite (GO:0032100), negative regulation of interleukin-1 beta production (GO:0032691), negative regulation of interleukin-6 production (GO:0032715), negative regulation of tumor necrosis factor production (GO:0032720), positive regulation of insulin secretion involved in cellular response to glucose stimulus (GO:0035774), positive regulation of growth rate (GO:0040010), negative regulation of locomotion (GO:0040013), positive regulation of multicellular organism growth (GO:0040018), regulation of cell population proliferation (GO:0042127), negative regulation of circadian sleep/wake cycle, REM sleep (GO:0042322), negative regulation of apoptotic process (GO:0043066), cortisol secretion (GO:0043400), positive regulation of MAPK cascade (GO:0043410), response to estrogen (GO:0043627), positive regulation of circadian sleep/wake cycle, non-REM sleep (GO:0046010), negative regulation of insulin secretion (GO:0046676), decidualization (GO:0046697), negative regulation of inflammatory response (GO:0050728), cartilage development (GO:0051216), positive regulation of corticotropin secretion (GO:0051461), positive regulation of cortisol secretion (GO:0051464), response to electrical stimulus (GO:0051602), positive regulation of synapse assembly (GO:0051965), regulation of transmission of nerve impulse (GO:0051969), excitatory postsynaptic potential (GO:0060079)
GO Molecular Function (6): G protein-coupled receptor binding (GO:0001664), growth hormone-releasing hormone activity (GO:0016608), protein tyrosine kinase activator activity (GO:0030296), ghrelin receptor binding (GO:0031768), hormone activity (GO:0005179), protein binding (GO:0005515)
GO Cellular Component (10): extracellular region (GO:0005576), obsolete extracellular space (GO:0005615), endoplasmic reticulum lumen (GO:0005788), axon (GO:0030424), secretory granule lumen (GO:0034774), Schaffer collateral - CA1 synapse (GO:0098685), postsynapse (GO:0098794), glutamatergic synapse (GO:0098978), neuronal dense core vesicle lumen (GO:0099013), cytoplasm (GO:0005737)
Reactome top-level categories
Rollup of top-3 pathways:
| Category | Pathways |
|---|---|
| Class A/1 (Rhodopsin-like receptors) | 1 |
| GPCR downstream signalling | 1 |
| Peptide hormone metabolism | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 3 |
| synapse | 3 |
| signal transduction | 2 |
| digestive system process | 1 |
| acid secretion | 1 |
| endothelial cell proliferation | 1 |
| regulation of endothelial cell proliferation | 1 |
| negative regulation of epithelial cell proliferation | 1 |
| hexose metabolic process | 1 |
| G protein-coupled receptor activity | 1 |
| regulation of biological quality | 1 |
| nervous system development | 1 |
| cell junction assembly | 1 |
| synapse organization | 1 |
| actin filament organization | 1 |
| feeding behavior | 1 |
| adult behavior | 1 |
| response to endogenous stimulus | 1 |
| response to chemical | 1 |
| cellular response to hormone stimulus | 1 |
| neuron projection development | 1 |
| anatomical structure development | 1 |
| angiogenesis | 1 |
| regulation of angiogenesis | 1 |
| negative regulation of blood vessel morphogenesis | 1 |
| peptide hormone secretion | 1 |
| insulin secretion | 1 |
| positive regulation of protein secretion | 1 |
| regulation of insulin secretion | 1 |
| positive regulation of peptide hormone secretion | 1 |
| response to food | 1 |
| regulation of response to nutrient levels | 1 |
| positive regulation of response to food | 1 |
| regulation of appetite | 1 |
| interleukin-1 beta production | 1 |
| regulation of interleukin-1 beta production | 1 |
| negative regulation of interleukin-1 production | 1 |
| negative regulation of cytokine production | 1 |
| interleukin-6 production | 1 |
| regulation of interleukin-6 production | 1 |
Protein interactions and networks
STRING
1922 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| GHRL | GHSR | Q92847 | 999 |
| GHRL | GPR39 | O43194 | 983 |
| GHRL | NPY | P01303 | 983 |
| GHRL | LEP | P41159 | 978 |
| GHRL | AGRP | O00253 | 977 |
| GHRL | MBOAT4 | Q96T53 | 968 |
| GHRL | PYY | P10082 | 959 |
| GHRL | INS | P01308 | 936 |
| GHRL | POMC | P01189 | 933 |
| GHRL | CCK | P06307 | 933 |
| GHRL | GHRH | P01286 | 931 |
| GHRL | SST | P01166 | 926 |
| GHRL | PPY | P01298 | 903 |
| GHRL | GCG | P01275 | 897 |
| GHRL | MC4R | P32245 | 884 |
IntAct
14 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| UBQLN1 | GHRL | psi-mi:“MI:0915”(physical association) | 0.560 |
| GHRL | UBQLN1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GHRL | UBQLN2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GHRL | GNPAT | psi-mi:“MI:0914”(association) | 0.350 |
| BRK1 | KIF5C | psi-mi:“MI:0914”(association) | 0.350 |
| FARSB | HSBP1 | psi-mi:“MI:0914”(association) | 0.350 |
| DNAJC19 | CORO7 | psi-mi:“MI:0914”(association) | 0.350 |
| GHRL | UBQLN2 | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (22): GHRL (Two-hybrid), GHRL (Reconstituted Complex), UBQLN2 (Two-hybrid), GPD2 (Affinity Capture-MS), GHRL (Affinity Capture-MS), SIRT5 (Affinity Capture-MS), C2orf44 (Affinity Capture-MS), GHRL (Affinity Capture-MS), GNPAT (Affinity Capture-MS), GHRL (Affinity Capture-MS), NECAP2 (Affinity Capture-MS), HSPA5 (Affinity Capture-MS), UTP6 (Affinity Capture-MS), GHRL (Cross-Linking-MS (XL-MS)), GHRL (FRET)
ESM2 similar proteins: A0MLS4, A2BD09, A2D4U1, A2D670, A2T6K4, O14669, P01257, P01286, P02818, P02820, P02822, P27916, P41547, P51693, P63292, P70160, P84348, P84349, P84350, Q03157, Q0VCT2, Q2NL23, Q3KNT9, Q3TYX2, Q5HZE8, Q5T124, Q60549, Q64375, Q6AYE5, Q6BEG6, Q6BEG7, Q71SY6, Q76IQ4, Q7M742, Q7TNI2, Q86UD1, Q8JFY4, Q8K2B0, Q8QZR4, Q8R182
Diamond homologs: A0MLS4, Q6BEG6, Q6BEG7, Q76IQ4, Q8JFY4, Q9BDJ6, Q9BEF8, Q9EQX0, Q9GKY5, Q9QYH7, Q9UBU3, Q8AUU1
SIGNOR signaling
1 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| GHRL | up-regulates | GHSR | binding |
Disease & clinical
Clinical variants and AI predictions
ClinVar
31 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 16 |
| Likely benign | 1 |
| Benign | 6 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1072 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 3:10289769:T:TA | donor_gain | 1.0000 |
| 3:10286697:GACTC:G | donor_loss | 0.9900 |
| 3:10286698:ACTCA:A | donor_loss | 0.9900 |
| 3:10286699:CTCA:C | donor_loss | 0.9900 |
| 3:10286700:TCACC:T | donor_loss | 0.9900 |
| 3:10286701:CACCT:C | donor_loss | 0.9900 |
| 3:10286813:C:CC | acceptor_gain | 0.9900 |
| 3:10289758:CGA:C | donor_loss | 0.9900 |
| 3:10289759:GA:G | donor_loss | 0.9900 |
| 3:10289760:A:AG | donor_loss | 0.9900 |
| 3:10289760:AC:A | donor_gain | 0.9900 |
| 3:10289761:CC:C | donor_gain | 0.9900 |
| 3:10289770:C:A | donor_gain | 0.9900 |
| 3:10289796:TG:T | donor_gain | 0.9900 |
| 3:10289874:CTCTG:C | acceptor_gain | 0.9900 |
| 3:10289875:TCTG:T | acceptor_loss | 0.9900 |
| 3:10289876:CTG:C | acceptor_gain | 0.9900 |
| 3:10289876:CTGC:C | acceptor_loss | 0.9900 |
| 3:10289878:GC:G | acceptor_loss | 0.9900 |
| 3:10289879:C:CA | acceptor_loss | 0.9900 |
| 3:10289879:C:CC | acceptor_gain | 0.9900 |
| 3:10289880:T:G | acceptor_loss | 0.9900 |
| 3:10292837:CTTA:C | donor_loss | 0.9900 |
| 3:10292838:TTA:T | donor_loss | 0.9900 |
| 3:10292839:TA:T | donor_loss | 0.9900 |
| 3:10285893:CT:C | acceptor_gain | 0.9800 |
| 3:10285895:C:CC | acceptor_gain | 0.9800 |
| 3:10286808:TTGAA:T | acceptor_gain | 0.9800 |
| 3:10286809:TGAA:T | acceptor_gain | 0.9800 |
| 3:10289760:A:AC | donor_gain | 0.9800 |
AlphaMissense
0 scored. Top likely-pathogenic:
dbSNP variants (sampled 300 via entrez): RS1000183653 (3:10288125 C>T), RS1000408195 (3:10291645 G>A), RS1000466170 (3:10288950 G>A), RS1000796435 (3:10293265 G>C,T), RS1001102122 (3:10289038 G>A), RS1001143811 (3:10293047 C>T), RS1001245968 (3:10291993 T>C), RS1001470480 (3:10288119 A>G), RS1001533674 (3:10289225 C>T), RS1001782502 (3:10288619 A>G), RS1001839466 (3:10287879 A>G), RS1001959162 (3:10291040 T>C), RS1002067066 (3:10289328 C>A,T), RS1003109466 (3:10286206 T>G), RS1003326045 (3:10293357 G>A)
Disease associations
OMIM: gene MIM:605353 | disease phenotypes: MIM:601665
GenCC curated gene-disease
Mondo (2): obesity disorder (MONDO:0011122), inherited obesity (MONDO:0019182)
Orphanet (3): Obesity due to melanocortin 4 receptor deficiency (Orphanet:71529), Genetic obesity (Orphanet:77828), NON RARE IN EUROPE: Non rare obesity (Orphanet:521399)
HPO phenotypes
6 total (6 of 6 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000007 | Autosomal recessive inheritance |
| HP:0001513 | Obesity |
| HP:0010982 | Polygenic inheritance |
| HP:0012340 | Decreased resting energy expenditure |
| HP:0031819 | Increased waist to hip ratio |
GWAS associations
2 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST004521_106 | Autism spectrum disorder or schizophrenia | 2.000000e-08 |
| GCST012316_3 | ghrelin levels | 3.000000e-08 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0600001 | ghrelin measurement |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1921664 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
67 potent at pChembl≥5 of 67 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 9.03 | IC50 | 0.9333 | nM | CHEMBL5177247 |
| 9.00 | EC50 | 1 | nM | CHEMBL5177247 |
| 8.86 | EC50 | 1.38 | nM | CHEMBL5180468 |
| 8.84 | IC50 | 1.45 | nM | CHEMBL5177247 |
| 8.84 | IC50 | 1.445 | nM | CHEMBL5177247 |
| 8.82 | EC50 | 1.51 | nM | CHEMBL5177624 |
| 8.82 | EC50 | 1.514 | nM | CHEMBL5177624 |
| 8.80 | IC50 | 1.585 | nM | CHEMBL5180468 |
| 8.80 | EC50 | 1.58 | nM | CHEMBL5174499 |
| 8.80 | EC50 | 1.585 | nM | CHEMBL5174499 |
| 8.79 | EC50 | 1.62 | nM | CHEMBL5193962 |
| 8.79 | EC50 | 1.622 | nM | CHEMBL5193962 |
| 8.78 | IC50 | 1.66 | nM | CHEMBL5177624 |
| 8.72 | IC50 | 1.905 | nM | CHEMBL5174499 |
| 8.71 | EC50 | 1.95 | nM | CHEMBL425281 |
| 8.66 | IC50 | 2.19 | nM | CHEMBL425281 |
| 8.66 | IC50 | 2.188 | nM | CHEMBL425281 |
| 8.66 | IC50 | 2.19 | nM | CHEMBL5177624 |
| 8.66 | IC50 | 2.188 | nM | CHEMBL5177624 |
| 8.65 | IC50 | 2.239 | nM | CHEMBL5193962 |
| 8.63 | EC50 | 2.344 | nM | CHEMBL5185223 |
| 8.62 | EC50 | 2.4 | nM | CHEMBL5185223 |
| 8.60 | IC50 | 2.512 | nM | CHEMBL5185223 |
| 8.57 | IC50 | 2.69 | nM | CHEMBL5180468 |
| 8.57 | IC50 | 2.692 | nM | CHEMBL5180468 |
| 8.49 | IC50 | 3.24 | nM | CHEMBL5174499 |
| 8.49 | IC50 | 3.236 | nM | CHEMBL5174499 |
| 8.48 | EC50 | 3.31 | nM | CHEMBL5171639 |
| 8.48 | EC50 | 3.311 | nM | CHEMBL5171639 |
| 8.45 | IC50 | 3.55 | nM | CHEMBL425281 |
| 8.45 | IC50 | 3.548 | nM | CHEMBL425281 |
| 8.42 | IC50 | 3.802 | nM | CHEMBL5171639 |
| 8.37 | IC50 | 4.27 | nM | CHEMBL5185223 |
| 8.37 | IC50 | 4.266 | nM | CHEMBL5185223 |
| 8.34 | IC50 | 4.57 | nM | CHEMBL5193962 |
| 8.34 | IC50 | 4.571 | nM | CHEMBL5193962 |
| 8.22 | IC50 | 6.026 | nM | CHEMBL5200946 |
| 8.18 | EC50 | 6.61 | nM | CHEMBL5200946 |
| 8.18 | EC50 | 6.607 | nM | CHEMBL5200946 |
| 8.17 | EC50 | 6.76 | nM | CHEMBL5183670 |
| 8.17 | EC50 | 6.761 | nM | CHEMBL5183670 |
| 8.07 | IC50 | 8.51 | nM | CHEMBL5171639 |
| 8.07 | IC50 | 8.511 | nM | CHEMBL5171639 |
| 8.00 | IC50 | 10 | nM | CHEMBL5200946 |
| 7.98 | IC50 | 10.5 | nM | CHEMBL5177247 |
| 7.98 | IC50 | 10.47 | nM | CHEMBL5177247 |
| 7.94 | IC50 | 11.48 | nM | CHEMBL5183670 |
| 7.93 | IC50 | 11.7 | nM | CHEMBL425281 |
| 7.93 | IC50 | 11.75 | nM | CHEMBL425281 |
| 7.92 | IC50 | 12 | nM | CHEMBL5180468 |
PubChem BioAssay actives
67 with measured affinity, of 67 total; 12 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (4S)-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[(2-aminoacetyl)amino]-3-hydroxypropanoyl]amino]-3-(2-methyloctylsulfanyl)propanoyl]amino]-3-phenylpropanoyl]amino]-4-methylpentanoyl]amino]-3-hydroxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[(2S)-2-[(2S)-2-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-5-amino-1-[(2S)-2-[[(1S)-4-carbamimidamido-1-carboxybutyl]carbamoyl]pyrrolidin-1-yl]-1,5-dioxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxopropan-2-yl]carbamoyl]pyrrolidine-1-carbonyl]pyrrolidin-1-yl]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-4-carboxy-1-oxobutan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-(1H-imidazol-4-yl)-1-oxopropan-2-yl]amino]-5-oxopentanoic acid | 1865461: Displacement of C-terminal Cys-tagged SmBiT tracer from C-terminal Cys-tagged human Ghrelin expressed in HEK293T cells by microplate reader based NanoBiT-binding assay | ic50 | 0.0009 | uM |
| (4S)-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[(2-aminoacetyl)amino]-3-hydroxypropanoyl]amino]-3-(2-methylheptylsulfanyl)propanoyl]amino]-3-phenylpropanoyl]amino]-4-methylpentanoyl]amino]-3-hydroxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[(2S)-2-[(2S)-2-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-5-amino-1-[(2S)-2-[[(1S)-4-carbamimidamido-1-carboxybutyl]carbamoyl]pyrrolidin-1-yl]-1,5-dioxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxopropan-2-yl]carbamoyl]pyrrolidine-1-carbonyl]pyrrolidin-1-yl]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-4-carboxy-1-oxobutan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-(1H-imidazol-4-yl)-1-oxopropan-2-yl]amino]-5-oxopentanoic acid | 1865463: Displacement of C-terminal Cys-tagged NanoLuc luciferase from C-terminal Cys-tagged human Ghrelin expressed in HEK293T cells by microplate reader based NanoBiT-binding assay | ec50 | 0.0014 | uM |
| (4S)-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[(2-aminoacetyl)amino]-3-hydroxypropanoyl]amino]-3-(2,6-dimethylheptylsulfanyl)propanoyl]amino]-3-phenylpropanoyl]amino]-4-methylpentanoyl]amino]-3-hydroxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[(2S)-2-[(2S)-2-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-5-amino-1-[(2S)-2-[[(1S)-4-carbamimidamido-1-carboxybutyl]carbamoyl]pyrrolidin-1-yl]-1,5-dioxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxopropan-2-yl]carbamoyl]pyrrolidine-1-carbonyl]pyrrolidin-1-yl]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-4-carboxy-1-oxobutan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-(1H-imidazol-4-yl)-1-oxopropan-2-yl]amino]-5-oxopentanoic acid | 1865463: Displacement of C-terminal Cys-tagged NanoLuc luciferase from C-terminal Cys-tagged human Ghrelin expressed in HEK293T cells by microplate reader based NanoBiT-binding assay | ec50 | 0.0015 | uM |
| (4S)-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[(2-aminoacetyl)amino]-3-hydroxypropanoyl]amino]-3-nonylsulfanylpropanoyl]amino]-3-phenylpropanoyl]amino]-4-methylpentanoyl]amino]-3-hydroxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[(2S)-2-[(2S)-2-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-5-amino-1-[(2S)-2-[[(1S)-4-carbamimidamido-1-carboxybutyl]carbamoyl]pyrrolidin-1-yl]-1,5-dioxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxopropan-2-yl]carbamoyl]pyrrolidine-1-carbonyl]pyrrolidin-1-yl]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-4-carboxy-1-oxobutan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-(1H-imidazol-4-yl)-1-oxopropan-2-yl]amino]-5-oxopentanoic acid | 1865463: Displacement of C-terminal Cys-tagged NanoLuc luciferase from C-terminal Cys-tagged human Ghrelin expressed in HEK293T cells by microplate reader based NanoBiT-binding assay | ec50 | 0.0016 | uM |
| (4S)-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[(2-aminoacetyl)amino]-3-hydroxypropanoyl]amino]-3-decylsulfanylpropanoyl]amino]-3-phenylpropanoyl]amino]-4-methylpentanoyl]amino]-3-hydroxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[(2S)-2-[(2S)-2-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-5-amino-1-[(2S)-2-[[(1S)-4-carbamimidamido-1-carboxybutyl]carbamoyl]pyrrolidin-1-yl]-1,5-dioxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxopropan-2-yl]carbamoyl]pyrrolidine-1-carbonyl]pyrrolidin-1-yl]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-4-carboxy-1-oxobutan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-(1H-imidazol-4-yl)-1-oxopropan-2-yl]amino]-5-oxopentanoic acid | 1865463: Displacement of C-terminal Cys-tagged NanoLuc luciferase from C-terminal Cys-tagged human Ghrelin expressed in HEK293T cells by microplate reader based NanoBiT-binding assay | ec50 | 0.0016 | uM |
| (4S)-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[(2-aminoacetyl)amino]-3-hydroxypropanoyl]amino]-3-octanoyloxypropanoyl]amino]-3-phenylpropanoyl]amino]-4-methylpentanoyl]amino]-3-hydroxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[(2S)-2-[(2S)-2-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-5-amino-1-[(2S)-2-[[(1S)-4-carbamimidamido-1-carboxybutyl]carbamoyl]pyrrolidin-1-yl]-1,5-dioxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxopropan-2-yl]carbamoyl]pyrrolidine-1-carbonyl]pyrrolidin-1-yl]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-4-carboxy-1-oxobutan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-(1H-imidazol-5-yl)-1-oxopropan-2-yl]amino]-5-oxopentanoic acid | 1865463: Displacement of C-terminal Cys-tagged NanoLuc luciferase from C-terminal Cys-tagged human Ghrelin expressed in HEK293T cells by microplate reader based NanoBiT-binding assay | ec50 | 0.0019 | uM |
| (4S)-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[(2-aminoacetyl)amino]-3-hydroxypropanoyl]amino]-3-octylsulfanylpropanoyl]amino]-3-phenylpropanoyl]amino]-4-methylpentanoyl]amino]-3-hydroxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[(2S)-2-[(2S)-2-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-5-amino-1-[(2S)-2-[[(1S)-4-carbamimidamido-1-carboxybutyl]carbamoyl]pyrrolidin-1-yl]-1,5-dioxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxopropan-2-yl]carbamoyl]pyrrolidine-1-carbonyl]pyrrolidin-1-yl]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-4-carboxy-1-oxobutan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-(1H-imidazol-4-yl)-1-oxopropan-2-yl]amino]-5-oxopentanoic acid | 1865463: Displacement of C-terminal Cys-tagged NanoLuc luciferase from C-terminal Cys-tagged human Ghrelin expressed in HEK293T cells by microplate reader based NanoBiT-binding assay | ec50 | 0.0023 | uM |
| (4S)-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[(2-aminoacetyl)amino]-3-hydroxypropanoyl]amino]-3-heptylsulfanylpropanoyl]amino]-3-phenylpropanoyl]amino]-4-methylpentanoyl]amino]-3-hydroxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[(2S)-2-[(2S)-2-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-5-amino-1-[(2S)-2-[[(1S)-4-carbamimidamido-1-carboxybutyl]carbamoyl]pyrrolidin-1-yl]-1,5-dioxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxopropan-2-yl]carbamoyl]pyrrolidine-1-carbonyl]pyrrolidin-1-yl]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-4-carboxy-1-oxobutan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-(1H-imidazol-4-yl)-1-oxopropan-2-yl]amino]-5-oxopentanoic acid | 1865463: Displacement of C-terminal Cys-tagged NanoLuc luciferase from C-terminal Cys-tagged human Ghrelin expressed in HEK293T cells by microplate reader based NanoBiT-binding assay | ec50 | 0.0033 | uM |
| (4S)-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[(2-aminoacetyl)amino]-3-hydroxypropanoyl]amino]-3-(4-phenylbutylsulfanyl)propanoyl]amino]-3-phenylpropanoyl]amino]-4-methylpentanoyl]amino]-3-hydroxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[(2S)-2-[(2S)-2-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-5-amino-1-[(2S)-2-[[(1S)-4-carbamimidamido-1-carboxybutyl]carbamoyl]pyrrolidin-1-yl]-1,5-dioxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxopropan-2-yl]carbamoyl]pyrrolidine-1-carbonyl]pyrrolidin-1-yl]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-4-carboxy-1-oxobutan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-(1H-imidazol-4-yl)-1-oxopropan-2-yl]amino]-5-oxopentanoic acid | 1865461: Displacement of C-terminal Cys-tagged SmBiT tracer from C-terminal Cys-tagged human Ghrelin expressed in HEK293T cells by microplate reader based NanoBiT-binding assay | ic50 | 0.0060 | uM |
| (4S)-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[(2-aminoacetyl)amino]-3-hydroxypropanoyl]amino]-3-hexylsulfanylpropanoyl]amino]-3-phenylpropanoyl]amino]-4-methylpentanoyl]amino]-3-hydroxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[(2S)-2-[(2S)-2-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-5-amino-1-[(2S)-2-[[(1S)-4-carbamimidamido-1-carboxybutyl]carbamoyl]pyrrolidin-1-yl]-1,5-dioxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxopropan-2-yl]carbamoyl]pyrrolidine-1-carbonyl]pyrrolidin-1-yl]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-4-carboxy-1-oxobutan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-(1H-imidazol-4-yl)-1-oxopropan-2-yl]amino]-5-oxopentanoic acid | 1865463: Displacement of C-terminal Cys-tagged NanoLuc luciferase from C-terminal Cys-tagged human Ghrelin expressed in HEK293T cells by microplate reader based NanoBiT-binding assay | ec50 | 0.0068 | uM |
| (4S)-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[(2-aminoacetyl)amino]-3-hydroxypropanoyl]amino]-3-pentylsulfanylpropanoyl]amino]-3-phenylpropanoyl]amino]-4-methylpentanoyl]amino]-3-hydroxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[(2S)-2-[(2S)-2-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-5-amino-1-[(2S)-2-[[(1S)-4-carbamimidamido-1-carboxybutyl]carbamoyl]pyrrolidin-1-yl]-1,5-dioxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxopropan-2-yl]carbamoyl]pyrrolidine-1-carbonyl]pyrrolidin-1-yl]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-4-carboxy-1-oxobutan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-(1H-imidazol-4-yl)-1-oxopropan-2-yl]amino]-5-oxopentanoic acid | 1865463: Displacement of C-terminal Cys-tagged NanoLuc luciferase from C-terminal Cys-tagged human Ghrelin expressed in HEK293T cells by microplate reader based NanoBiT-binding assay | ec50 | 0.0138 | uM |
| (4S)-4-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[(2-aminoacetyl)amino]-3-hydroxypropanoyl]amino]-3-(3-phenylmethoxypropylsulfanyl)propanoyl]amino]-3-phenylpropanoyl]amino]-4-methylpentanoyl]amino]-3-hydroxypropanoyl]pyrrolidine-2-carbonyl]amino]-5-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[(2S)-2-[(2S)-2-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-5-amino-1-[(2S)-2-[[(1S)-4-carbamimidamido-1-carboxybutyl]carbamoyl]pyrrolidin-1-yl]-1,5-dioxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxopropan-2-yl]carbamoyl]pyrrolidine-1-carbonyl]pyrrolidin-1-yl]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-4-carboxy-1-oxobutan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-3-(1H-imidazol-4-yl)-1-oxopropan-2-yl]amino]-5-oxopentanoic acid | 1865463: Displacement of C-terminal Cys-tagged NanoLuc luciferase from C-terminal Cys-tagged human Ghrelin expressed in HEK293T cells by microplate reader based NanoBiT-binding assay | ec50 | 0.0174 | uM |
CTD chemical–gene interactions
23 total (human), top 23 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Orlistat | decreases expression, decreases reaction, decreases secretion | 2 |
| Glucose | decreases reaction, increases expression, increases reaction, affects cotreatment, increases secretion | 2 |
| triphenyl phosphate | affects expression | 1 |
| bisphenol A | affects cotreatment, increases methylation | 1 |
| osteum | decreases expression, decreases reaction | 1 |
| sodium arsenite | decreases expression | 1 |
| arctigenin | increases expression, increases reaction, decreases reaction | 1 |
| dexloxiglumide | decreases reaction, decreases expression | 1 |
| homoeriodictyol | increases secretion, affects cotreatment | 1 |
| 6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxamide | decreases reaction, increases expression | 1 |
| Olive Oil | decreases expression, decreases reaction | 1 |
| Resveratrol | affects cotreatment, decreases expression | 1 |
| Fulvestrant | affects cotreatment, increases methylation | 1 |
| Arsenic | affects methylation | 1 |
| Dust | increases expression | 1 |
| Paraquat | decreases reaction, increases activity | 1 |
| Plant Extracts | affects cotreatment, decreases expression | 1 |
| Polychlorinated Biphenyls | affects expression | 1 |
| Prostaglandins E | increases secretion | 1 |
| Prostaglandins F | increases secretion | 1 |
| Tretinoin | increases expression | 1 |
| Triglycerides | decreases reaction, decreases secretion | 1 |
| Aflatoxin B1 | increases methylation | 1 |
ChEMBL screening assays
4 unique, capped per target: 4 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5120531 | Binding | Displacement of C-terminal Cys-tagged SmBiT tracer from C-terminal Cys-tagged human Ghrelin expressed in HEK293T cells by microplate reader based NanoBiT-binding assay | Development of Esterase-Resistant and Highly Active Ghrelin Analogs via Thiol-Ene Click Chemistry. — ACS Med Chem Lett |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00076362 | PHASE4 | COMPLETED | Pediatric Hypothalamic Obesity |
| NCT00079547 | PHASE4 | COMPLETED | The Safety and Effectiveness of Low and High Carbohydrate Diets |
| NCT00115063 | PHASE4 | TERMINATED | LOSS- Louisiana Obese Subjects Study |
| NCT00134303 | PHASE4 | COMPLETED | Trial Comparing Metformin Versus Placebo in Non Alcoholic Steatohepatitis (NASH) Patients Receiving Bariatric Surgery for Obesity |
| NCT00143936 | PHASE4 | COMPLETED | The Safety and Efficacy of Low and High Carbohydrate Diets |
| NCT00143962 | PHASE4 | COMPLETED | Comparison of Two Approaches to Weight Loss Follow-Up Study |
| NCT00152360 | PHASE4 | COMPLETED | The Effect of Xenical on Weight and Risk Factors |
| NCT00176306 | PHASE4 | COMPLETED | Levofloxacin Pharmacokinetics (PK) in the Severely Obese |
| NCT00203450 | PHASE4 | COMPLETED | Zonegran for the Treatment of Weight Gain Associated With Psychotropic Medication Use: A Placebo-Controlled Trial |
| NCT00205504 | PHASE4 | COMPLETED | Oral Contraceptives in the Metabolic Syndrome |
| NCT00229229 | PHASE4 | TERMINATED | Comparison of 4 Diets in the Management of Overweight Patients With Vascular Disease |
| NCT00234988 | PHASE4 | COMPLETED | A Phase IV, Multi-Center, Open-Label Trial of Sibutramine in Combination With a Hypocaloric Diet in Obese and Overweight Thai Subjects. |
| NCT00264589 | PHASE4 | COMPLETED | Exercise Training and Cardiovascular Function in Obesity and in Type 2 Diabetes |
| NCT00288873 | PHASE4 | COMPLETED | Characterization of Hyperparathyroidism and Vitamin D Deficiency in Obesity |
| NCT00298857 | PHASE4 | TERMINATED | A Pharmacokinetic Study to Compare the Dosing of Valproic Acid in Subjects With Different Body Weights |
| NCT00315146 | PHASE4 | COMPLETED | Optimizing Body Composition for Function in Older Adults |
| NCT00319202 | PHASE4 | TERMINATED | Clinical Trial to Assess the Effects of Candesartan on the Carbohydrate Metabolism of Obese Subjects |
| NCT00327912 | PHASE4 | UNKNOWN | Laparoscopic Roux-en-Y Gastric Bypass Versus Laparoscopic Biliopancreatic Diversion (BPD)- Duodenal Switch for Superobesity |
| NCT00352287 | PHASE4 | COMPLETED | Study to Determine the Effects of Human Growth Hormone and Pioglitazone in Overweight, Prediabetic Adults |
| NCT00353054 | PHASE4 | COMPLETED | Effect of Calcium/Vitamin D Supplementation on Body Weight and Fat Loss. |
| NCT00390637 | PHASE4 | COMPLETED | Diet, Obesity and Genes (DiOGenes) |
| NCT00415688 | PHASE4 | COMPLETED | Lifestyle Modification for Obesity-Related Type 2 Diabetes |
| NCT00433641 | PHASE4 | COMPLETED | Weight Loss in Response to Sibutramine (MERIDIA) is Influenced by the Inherited Genes |
| NCT00440375 | PHASE4 | COMPLETED | Effects of Rosiglitazone on Bone in Postmenopausal Diabetic Women |
| NCT00453557 | PHASE4 | COMPLETED | Mechanism of Growth Hormone Effects on Adipose Tissue |
| NCT00456885 | PHASE4 | COMPLETED | The Effect of Exenatide on Weight and Hunger in Obese, Healthy Women |
| NCT00463112 | PHASE4 | COMPLETED | Effect of Diet Plus Sibutramine on Hormonal and Metabolic Features in Overweight and Obese Women With PCOS |
| NCT00512187 | PHASE4 | COMPLETED | Moderate Weight Loss Makes Obese Patients With Severe Chronic Plaque Psoriasis Responsive to Sub-Optimal Dose of Cyclosporine: an Investigator Blinded, Controlled, Randomized Clinical Trial |
| NCT00516919 | PHASE4 | COMPLETED | Study of Behavioral Weight Loss Therapy for Obesity and Binge Eating in Monolingual Hispanic Persons |
| NCT00522470 | PHASE4 | COMPLETED | Effects of Rosiglitazone on Serum Ghrelin and Peptide YY Levels |
| NCT00537810 | PHASE4 | COMPLETED | Treatment of Binge Eating in Obese Patients in Primary Care |
| NCT00538486 | PHASE4 | COMPLETED | A Randomized, Double-Blind, Active Control Trial Comparing Effects of Telmisartan, Candesartan and Amlodipine, Alone or Plus Metformin, on Non-Diabetic, Obese Hypertensive Patients |
| NCT00584389 | PHASE4 | TERMINATED | The Effect of Rimonabant on Energy Expenditure, Fat Metabolism and Body Composition |
| NCT00585182 | PHASE4 | COMPLETED | Study to Evaluate Weight-based Enoxaparin Dosing in Obese Medical Patients at Risk for DVT |
| NCT00632840 | PHASE4 | COMPLETED | Pharmacological Regulation of Fat Transport in Metabolic Syndrome |
| NCT00636142 | PHASE4 | COMPLETED | Effects of Infliximab on Insulin Sensitivity and Beta Cell Function in Insulin Resistant Human Obesity |
| NCT00675987 | PHASE4 | COMPLETED | A Randomized Clinical Trial To Study Losartan On Endothelial Dysfunction and Insulin Resistance In Obese Patients |
| NCT00694811 | PHASE4 | COMPLETED | Effects of Re-Feeding Duration on Weight Maintenance After Weight Loss With Very-Low-Energy Diets (VLEDs) |
| NCT00699413 | PHASE4 | TERMINATED | Supplements for Controlling Resistance to Insulin |
| NCT00729963 | PHASE4 | COMPLETED | Sibutramine Versus Continuous Positive Airway Pressure (CPAP)in Obstructive Sleep Apnea (OSA) Patients |
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): inherited obesity, obesity disorder