GJD4-AS1

Summary

GJD4-AS1 (GJD4 antisense RNA 1, HGNC:58343) is a long non-coding RNA gene on chromosome 10p11.21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58343
Approved symbol	GJD4-AS1
Name	GJD4 antisense RNA 1
Location	10p11.21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000273312
Ensembl biotype	lncRNA
Entrez	140577505

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000609313, ENST00000635993

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000609313 — 1 exons

Exon	Start	End
ENSE00003708846	35606001	35608153

Expression profiles

Bgee: expression breadth broad, 96 present calls, max score 72.32.

Top tissues by expression

96 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	72.32	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	70.70	gold quality
ventricular zone	UBERON:0003053	68.78	gold quality
prefrontal cortex	UBERON:0000451	68.32	gold quality
superior frontal gyrus	UBERON:0002661	68.15	gold quality
cerebellar hemisphere	UBERON:0002245	67.03	gold quality
frontal cortex	UBERON:0001870	66.95	gold quality
right hemisphere of cerebellum	UBERON:0014890	66.75	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	65.09	gold quality
right frontal lobe	UBERON:0002810	64.72	gold quality
Brodmann (1909) area 9	UBERON:0013540	64.08	gold quality
ganglionic eminence	UBERON:0004023	63.71	gold quality
anterior cingulate cortex	UBERON:0009835	63.71	gold quality
cerebral cortex	UBERON:0000956	63.63	gold quality
primary visual cortex	UBERON:0002436	62.90	gold quality
liver	UBERON:0002107	57.64	silver quality
hypothalamus	UBERON:0001898	57.52	gold quality
brain	UBERON:0000955	56.95	gold quality
temporal lobe	UBERON:0001871	56.23	gold quality
amygdala	UBERON:0001876	56.05	gold quality
ectocervix	UBERON:0012249	54.05	gold quality
urinary bladder	UBERON:0001255	53.90	gold quality
substantia nigra	UBERON:0002038	52.96	gold quality
Ammon’s horn	UBERON:0001954	51.49	gold quality
gall bladder	UBERON:0002110	51.37	gold quality
myometrium	UBERON:0001296	50.98	gold quality
monocyte	CL:0000576	50.45	silver quality
blood	UBERON:0000178	49.10	gold quality
multicellular organism	UBERON:0000468	48.99	gold quality
putamen	UBERON:0001874	48.50	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.95

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.