GLYATL1-AS1

Summary

GLYATL1-AS1 (GLYATL1 antisense RNA 1, HGNC:58086) is a long non-coding RNA gene on chromosome 11q12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58086
Approved symbol	GLYATL1-AS1
Name	GLYATL1 antisense RNA 1
Location	11q12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000255240
Ensembl biotype	lncRNA
Entrez	283194
RNAcentral	URS0002A37558 — lncRNA, 3361 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 98 — 98 lncRNA

ENST00000525714, ENST00000532098, ENST00000533954, ENST00000663130, ENST00000688864, ENST00000689587, ENST00000821647, ENST00000821648, ENST00000821649, ENST00000821650, ENST00000821651, ENST00000821652, ENST00000821653, ENST00000821654, ENST00000821655, ENST00000821656, ENST00000821657, ENST00000821658, ENST00000821659, ENST00000821660, ENST00000821661, ENST00000821662, ENST00000821663, ENST00000821664, ENST00000821665, ENST00000821666, ENST00000821667, ENST00000821668, ENST00000821669, ENST00000821670, ENST00000821671, ENST00000821672, ENST00000821673, ENST00000821674, ENST00000821675, ENST00000821676, ENST00000821677, ENST00000821678, ENST00000821679, ENST00000821680, ENST00000821681, ENST00000821682, ENST00000821683, ENST00000821684, ENST00000821685, ENST00000821686, ENST00000821687, ENST00000821688, ENST00000821689, ENST00000821690, ENST00000821691, ENST00000821692, ENST00000821693, ENST00000821694, ENST00000821695, ENST00000821696, ENST00000821697, ENST00000821698, ENST00000821699, ENST00000821700, ENST00000821701, ENST00000821702, ENST00000821703, ENST00000821704, ENST00000821705, ENST00000821706, ENST00000821707, ENST00000821708, ENST00000821709, ENST00000821710, ENST00000821711, ENST00000821712, ENST00000821713, ENST00000821714, ENST00000821715, ENST00000821716, ENST00000821717, ENST00000821718, ENST00000821719, ENST00000821720, ENST00000821721, ENST00000821722, ENST00000821723, ENST00000821724, ENST00000821725, ENST00000821726, ENST00000821727, ENST00000821728, ENST00000821729, ENST00000821730, ENST00000821731, ENST00000821732, ENST00000821733, ENST00000821734, ENST00000821735, ENST00000821736, ENST00000821927, ENST00000821928

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000525714 — 3 exons

Exon	Start	End
ENSE00002141600	58968942	58969073
ENSE00002155648	58979128	58979285
ENSE00002187895	58958217	58958820

Expression profiles

Bgee: expression breadth ubiquitous, 143 present calls, max score 84.84.

Top tissues by expression

234 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
monocyte	CL:0000576	84.84	gold quality
leukocyte	CL:0000738	83.79	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.93	gold quality
right lobe of liver	UBERON:0001114	74.48	gold quality
cortical plate	UBERON:0005343	72.29	gold quality
granulocyte	CL:0000094	71.50	gold quality
buccal mucosa cell	CL:0002336	69.69	gold quality
bone marrow cell	CL:0002092	69.31	silver quality
minor salivary gland	UBERON:0001830	67.98	gold quality
ganglionic eminence	UBERON:0004023	66.66	gold quality
superficial temporal artery	UBERON:0001614	66.49	gold quality
lymph node	UBERON:0000029	65.72	gold quality
ventricular zone	UBERON:0003053	65.42	gold quality
saliva-secreting gland	UBERON:0001044	65.35	gold quality
mouth mucosa	UBERON:0003729	65.23	gold quality
prostate gland	UBERON:0002367	65.13	gold quality
skin of abdomen	UBERON:0001416	64.55	gold quality
liver	UBERON:0002107	63.91	gold quality
vermiform appendix	UBERON:0001154	63.69	gold quality
oocyte	CL:0000023	63.49	gold quality
skin of leg	UBERON:0001511	62.18	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	61.35	gold quality
right lung	UBERON:0002167	61.23	gold quality
spleen	UBERON:0002106	61.19	gold quality
zone of skin	UBERON:0000014	60.72	gold quality
secondary oocyte	CL:0000655	60.57	gold quality
caecum	UBERON:0001153	60.20	gold quality
tonsil	UBERON:0002372	60.17	gold quality
tendon of biceps brachii	UBERON:0008188	59.82	silver quality
blood	UBERON:0000178	59.27	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.16

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.