GNA15
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Also known as GNA16
Summary
GNA15 (G protein subunit alpha 15, HGNC:4383) is a protein-coding gene on chromosome 19p13.3, encoding Guanine nucleotide-binding protein subunit alpha-15 (P30679). Member of the G-protein alpha subunit family that plays a crucial role in intracellular signaling.
Enables G protein-coupled receptor binding activity. Acts upstream of or within with a positive effect on calcium-mediated signaling. Predicted to be located in plasma membrane. Predicted to be part of heterotrimeric G-protein complex.
Source: NCBI Gene 2769 — RefSeq curated summary.
At a glance
- GWAS associations: 11
- Clinical variants (ClinVar): 64 total
- Druggable target: yes — 2 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_002068
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:4383 |
| Approved symbol | GNA15 |
| Name | G protein subunit alpha 15 |
| Location | 19p13.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | GNA16 |
| Ensembl gene | ENSG00000060558 |
| Ensembl biotype | protein_coding |
| OMIM | 139314 |
| Entrez | 2769 |
Gene structure
Transcript identifiers
Ensembl transcripts: 3 — 1 protein_coding, 1 retained_intron, 1 nonsense_mediated_decay
ENST00000262958, ENST00000586082, ENST00000592455
RefSeq mRNA: 1 — MANE Select: NM_002068
NM_002068
CCDS: CCDS12104
Canonical transcript exons
ENST00000262958 — 7 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000382975 | 3157728 | 3157881 |
| ENSE00000663864 | 3155823 | 3155952 |
| ENSE00000859540 | 3136033 | 3136595 |
| ENSE00000859541 | 3162793 | 3163749 |
| ENSE00003518039 | 3151707 | 3151835 |
| ENSE00003576971 | 3148591 | 3148775 |
| ENSE00003628220 | 3150131 | 3150285 |
Expression profiles
Bgee: expression breadth ubiquitous, 218 present calls, max score 98.14.
FANTOM5 (CAGE): breadth broad, TPM avg 14.8247 / max 834.2004, expressed in 633 samples.
FANTOM5 promoters (9 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 173145 | 6.0390 | 426 |
| 173144 | 4.5048 | 395 |
| 173142 | 3.2293 | 501 |
| 173147 | 0.5609 | 38 |
| 173146 | 0.1955 | 31 |
| 173143 | 0.1050 | 60 |
| 208644 | 0.0804 | 45 |
| 173149 | 0.0582 | 28 |
| 173148 | 0.0516 | 29 |
Top tissues by expression
284 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| lower esophagus mucosa | UBERON:0035834 | 98.14 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 95.29 | gold quality |
| esophagus mucosa | UBERON:0002469 | 95.24 | gold quality |
| palpebral conjunctiva | UBERON:0001812 | 94.80 | gold quality |
| squamous epithelium | UBERON:0006914 | 94.68 | gold quality |
| epithelium of esophagus | UBERON:0001976 | 94.62 | gold quality |
| cervix squamous epithelium | UBERON:0006922 | 94.35 | gold quality |
| tongue squamous epithelium | UBERON:0006919 | 93.48 | gold quality |
| gingival epithelium | UBERON:0001949 | 92.79 | gold quality |
| gingiva | UBERON:0001828 | 92.23 | gold quality |
| monocyte | CL:0000576 | 91.06 | gold quality |
| oral cavity | UBERON:0000167 | 90.79 | gold quality |
| mononuclear cell | CL:0000842 | 90.70 | gold quality |
| skin of abdomen | UBERON:0001416 | 90.50 | gold quality |
| buccal mucosa cell | CL:0002336 | 90.46 | gold quality |
| leukocyte | CL:0000738 | 90.35 | gold quality |
| amniotic fluid | UBERON:0000173 | 90.32 | gold quality |
| skin of leg | UBERON:0001511 | 89.68 | gold quality |
| cervix epithelium | UBERON:0004801 | 88.61 | gold quality |
| zone of skin | UBERON:0000014 | 88.37 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 88.30 | gold quality |
| periodontal ligament | UBERON:0008266 | 87.59 | gold quality |
| granulocyte | CL:0000094 | 87.06 | gold quality |
| pharyngeal mucosa | UBERON:0000355 | 86.34 | gold quality |
| nasal cavity epithelium | UBERON:0005384 | 85.32 | gold quality |
| blood | UBERON:0000178 | 85.28 | gold quality |
| eye | UBERON:0000970 | 84.90 | gold quality |
| pancreatic ductal cell | CL:0002079 | 84.37 | silver quality |
| vagina | UBERON:0000996 | 84.03 | gold quality |
| nasal cavity mucosa | UBERON:0001826 | 82.21 | gold quality |
Single-cell (SCXA)
Detected in 8 experiment(s), a significant marker in 6.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-4 | yes | 40.83 |
| E-MTAB-8142 | yes | 18.00 |
| E-ANND-3 | yes | 15.60 |
| E-CURD-122 | yes | 13.78 |
| E-MTAB-6701 | yes | 12.33 |
| E-CURD-112 | yes | 8.87 |
| E-GEOD-86618 | no | 31.19 |
| E-GEOD-36552 | no | 9.89 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
23 targeting GNA15, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4283 | 100.00 | 66.42 | 2097 |
| HSA-MIR-4779 | 99.86 | 66.50 | 1583 |
| HSA-MIR-204-5P | 99.79 | 71.62 | 2439 |
| HSA-MIR-211-5P | 99.79 | 71.65 | 2440 |
| HSA-MIR-4766-5P | 99.75 | 69.23 | 2662 |
| HSA-MIR-4306 | 99.72 | 70.50 | 3630 |
| HSA-MIR-6752-3P | 99.72 | 66.71 | 1587 |
| HSA-MIR-298 | 99.63 | 67.56 | 1916 |
| HSA-MIR-1827 | 99.63 | 68.57 | 3265 |
| HSA-MIR-6832-3P | 99.52 | 70.44 | 1726 |
| HSA-MIR-185-5P | 99.35 | 68.60 | 2497 |
| HSA-MIR-4644 | 99.35 | 69.12 | 2514 |
| HSA-MIR-361-3P | 99.19 | 66.45 | 1381 |
| HSA-MIR-12135 | 98.99 | 70.26 | 1814 |
| HSA-MIR-412-3P | 98.86 | 66.89 | 712 |
| HSA-MIR-6754-3P | 98.84 | 66.60 | 889 |
| HSA-MIR-4710 | 98.61 | 65.96 | 1048 |
| HSA-MIR-6887-5P | 98.56 | 68.49 | 1295 |
| HSA-MIR-6795-5P | 98.52 | 68.51 | 1277 |
| HSA-MIR-6748-3P | 97.20 | 65.66 | 836 |
| HSA-MIR-4296 | 96.35 | 63.55 | 1233 |
| HSA-MIR-4265 | 96.18 | 64.68 | 557 |
| HSA-MIR-4322 | 96.18 | 64.85 | 539 |
Literature-anchored findings (GeneRIF, showing 16)
- Megakaryocytopoiesis was accompanied by down-regulation of the 43 kDa and 46 kDa variants of G16alpha, constant expression of Gsalpha, and up-regulation of Gqalpha and Gialpha1/2. (PMID:11686331)
- role of intracellular loops of cannabinoid CB1 receptor in functional interaction with Galpha16. (PMID:12095632)
- G protein-coupled receptors activate STAT3 via G alpha(16), a G alpha subunit which is primarily expressed in hematopoietic cells. (PMID:12670499)
- Galpha16 stimulates STAT3 via a c-Src/JAK- and ERK-dependent mechanism (PMID:14551213)
- Results suggest that the G(q) class proteins are degraded through the proteasome pathway and that cellular localization and/or other protein interactions determine their stability. (PMID:16218966)
- Co-stimulation of G(s) and G(q) can result in the fine-tuning of STAT3 activation status, and this may provide the basis for cell type-specific responses following activation of hIP. (PMID:18755267)
- The paper describes G alpha 15 resistance to arrestin-desensitization making it differ from other heterotrimeric G proteins (Gq, Gs, Gi, G12/13 class) (PMID:19275934)
- The ability of CCR1 to signal through Galpha(14/16) thus provides a linkage for chemokines to regulate NF-kappaB-dependent responses. (PMID:19687291)
- This review summarizes the specific features that distinguish Galpha15/GNA15 (G15 alpha subunit) from all other alpha subunits of the Gq class. G15 is a heterotrimeric G protein complex that is named after its alpha subunit. (PMID:20150327)
- beta3 region of Galpha16 is essential for interaction with TPR1 and the subsequent activation of Ras (PMID:21486497)
- This paper shows how G alpha 15 and other Gq class members phosphorylate PKD in differing patterns (PMID:22227248)
- G15 ectopic presence could functionally contribute to the transformation process since siRNA-induced depletion of Galpha15 in pancreatic carcinoma cell lines dramatically inhibited anchorage-independent growth and resistance to the lack of nutrients. (PMID:23200847)
- Data indicate the importance of Galpha16 as a downstream effector of the non-canonical Wnt signaling pathway and as a potential therapeutic target for the treatment of non small cell lung cancer. (PMID:24204697)
- GNA15 was not expressed in normal neuroendocrine cells but was overexpressed in gastroenteropancreatic neuroendocrine neoplasia cell lines. (PMID:25701539)
- Exosomal miR-211-5p regulates glucose metabolism, pyroptosis, and immune microenvironment of melanoma through GNA15. (PMID:36642112)
- GNA15 facilitates the malignant development of thyroid carcinoma cells via the BTK-mediated MAPK signaling pathway. (PMID:38333922)
Cross-species orthologs
26 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | gna15.1 | ENSDARG00000016364 |
| danio_rerio | gna15.2 | ENSDARG00000056654 |
| danio_rerio | gna15.4 | ENSDARG00000071416 |
| danio_rerio | si:ch211-207c7.2 | ENSDARG00000092481 |
| danio_rerio | gna15.3 | ENSDARG00000092948 |
| danio_rerio | ENSDARG00000116003 | |
| mus_musculus | Gna15 | ENSMUSG00000034792 |
| rattus_norvegicus | Gna15 | ENSRNOG00000005378 |
| drosophila_melanogaster | cta | FBGN0000384 |
| drosophila_melanogaster | Galphai | FBGN0001104 |
| drosophila_melanogaster | Galphaf | FBGN0010223 |
| drosophila_melanogaster | CG17760 | FBGN0033756 |
| drosophila_melanogaster | CG30054 | FBGN0050054 |
| caenorhabditis_elegans | WBGENE00001664 | |
| caenorhabditis_elegans | WBGENE00001665 | |
| caenorhabditis_elegans | WBGENE00001666 | |
| caenorhabditis_elegans | WBGENE00001667 | |
| caenorhabditis_elegans | WBGENE00001668 | |
| caenorhabditis_elegans | WBGENE00001670 | |
| caenorhabditis_elegans | WBGENE00001671 | |
| caenorhabditis_elegans | WBGENE00001673 | |
| caenorhabditis_elegans | WBGENE00001674 | |
| caenorhabditis_elegans | WBGENE00001675 | |
| caenorhabditis_elegans | gpa-14 | WBGENE00001676 |
| caenorhabditis_elegans | gpa-16 | WBGENE00001678 |
| caenorhabditis_elegans | gsa-1 | WBGENE00001745 |
Paralogs (15): GNAI3 (ENSG00000065135), GNAO1 (ENSG00000087258), GNAS (ENSG00000087460), GNA11 (ENSG00000088256), GNAT1 (ENSG00000114349), GNAI2 (ENSG00000114353), GNA13 (ENSG00000120063), GNAI1 (ENSG00000127955), GNAZ (ENSG00000128266), GNAT2 (ENSG00000134183), GNAL (ENSG00000141404), GNA12 (ENSG00000146535), GNA14 (ENSG00000156049), GNAQ (ENSG00000156052), GNAT3 (ENSG00000214415)
Protein
Protein identifiers
Guanine nucleotide-binding protein subunit alpha-15 — P30679 (reviewed: P30679)
Alternative names: Epididymis tissue protein Li 17E, Guanine nucleotide-binding protein subunit alpha-16
All UniProt accessions (2): P30679, K7EP74
UniProt curated annotations — full annotation on UniProt →
Function. Member of the G-protein alpha subunit family that plays a crucial role in intracellular signaling. Functions as a molecular switch, transducing signals from G protein-coupled receptors (GPCRs) to downstream effectors. In collaboration with the adapter protein TTC1, promotes HRAS activation and ERK1/2 phosphorylation independently of phospholipase Cbeta signaling. Also initiates EMR2-mediated signaling, leading to activation of Akt, MAPK, and NF-kappa-B, which in turn drives macrophage differentiation and inflammatory responses.
Subunit / interactions. G proteins are composed of 3 units; alpha, beta and gamma. The alpha chain contains the guanine nucleotide binding site. Interacts with adapter protein TTC1. Interacts with SOS2.
Tissue specificity. Specifically expressed in hematopoietic cells. Expressed in epididymis (at protein level).
Similarity. Belongs to the G-alpha family. G(q) subfamily.
RefSeq proteins (1): NP_002059* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000654 | Gprotein_alpha_Q | Family |
| IPR001019 | Gprotein_alpha_su | Family |
| IPR011025 | GproteinA_insert | Homologous_superfamily |
| IPR027417 | P-loop_NTPase | Homologous_superfamily |
Pfam: PF00503
Enzyme classification (BRENDA):
- EC 3.6.5.1 — heterotrimeric G-protein GTPase (BRENDA: 35 organisms, 39 substrates, 15 inhibitors, 17 Km, 24 kcat entries)
Substrate kinetics (BRENDA)
1 substrates with measured Km, best-characterized 1. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| GTP | 0.0008–0.85 | 16 |
UniProt features (17 total): binding site 7, region of interest 5, chain 1, domain 1, modified residue 1, sequence variant 1, mutagenesis site 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P30679-F1 | 90.74 | 0.76 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (7): 189; 208–212; 277–280; 346; 49–56; 56; 183–189
Post-translational modifications (1): 186
Mutagenesis-validated functional residues (1):
| Position | Phenotype |
|---|---|
| 212 | gtpase-deficient mutant. no loss of binding to ttc1. |
Function
Pathways and Gene Ontology
Reactome pathways
9 pathways
| ID | Pathway |
|---|---|
| R-HSA-112043 | PLC beta mediated events |
| R-HSA-202040 | G-protein activation |
| R-HSA-399997 | Acetylcholine regulates insulin secretion |
| R-HSA-416476 | G alpha (q) signalling events |
| R-HSA-418592 | ADP signalling through P2Y purinoceptor 1 |
| R-HSA-428930 | Thromboxane signalling through TP receptor |
| R-HSA-434316 | Fatty Acids bound to GPR40 (FFAR1) regulate insulin secretion |
| R-HSA-456926 | Thrombin signalling through proteinase activated receptors (PARs) |
| R-HSA-6814122 | Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding |
MSigDB gene sets: 307 (showing top):
GSE37336_LY6C_POS_VS_NEG_NAIVE_CD4_TCELL_DN, GSE45365_NK_CELL_VS_CD8_TCELL_UP, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, BIOCARTA_FMLP_PATHWAY, YAGI_AML_WITH_INV_16_TRANSLOCATION, JAEGER_METASTASIS_DN, REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION, MODULE_64, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_UP, MODULE_16, GOBP_CELLULAR_RESPONSE_TO_OXYGEN_CONTAINING_COMPOUND, GOBP_CELL_CELL_SIGNALING, RICKMAN_METASTASIS_DN, RICKMAN_TUMOR_DIFFERENTIATED_WELL_VS_POORLY_DN, MODULE_289
GO Biological Process (5): phospholipase C-activating G protein-coupled acetylcholine receptor signaling pathway (GO:0007207), calcium-mediated signaling (GO:0019722), signal transduction (GO:0007165), G protein-coupled receptor signaling pathway (GO:0007186), phospholipase C-activating G protein-coupled receptor signaling pathway (GO:0007200)
GO Molecular Function (7): G protein-coupled receptor binding (GO:0001664), GTPase activity (GO:0003924), GTP binding (GO:0005525), G-protein beta/gamma-subunit complex binding (GO:0031683), metal ion binding (GO:0046872), nucleotide binding (GO:0000166), guanyl nucleotide binding (GO:0019001)
GO Cellular Component (3): heterotrimeric G-protein complex (GO:0005834), plasma membrane (GO:0005886), synapse (GO:0045202)
Reactome top-level categories
Rollup of top-8 pathways:
| Category | Pathways |
|---|---|
| Signal amplification | 2 |
| G-protein mediated events | 1 |
| Opioid Signalling | 1 |
| Regulation of insulin secretion | 1 |
| GPCR downstream signalling | 1 |
| Free fatty acids regulate insulin secretion | 1 |
| Platelet activation, signaling and aggregation | 1 |
| Chaperonin-mediated protein folding | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| phospholipase C-activating G protein-coupled receptor signaling pathway | 1 |
| G protein-coupled acetylcholine receptor signaling pathway | 1 |
| intracellular signaling cassette | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| G protein-coupled receptor activity | 1 |
| signal transduction | 1 |
| G protein-coupled receptor signaling pathway | 1 |
| phospholipase C activator activity | 1 |
| signaling receptor binding | 1 |
| ribonucleoside triphosphate phosphatase activity | 1 |
| guanyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| protein-containing complex binding | 1 |
| cation binding | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| purine nucleotide binding | 1 |
| extrinsic component of cytoplasmic side of plasma membrane | 1 |
| plasma membrane protein complex | 1 |
| GTPase complex | 1 |
| membrane | 1 |
| cell periphery | 1 |
| cell junction | 1 |
Protein interactions and networks
STRING
1336 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| GNA15 | S1PR4 | O95977 | 870 |
| GNA15 | NPFFR2 | Q9Y5X5 | 800 |
| GNA15 | PLCB2 | Q00722 | 744 |
| GNA15 | LPAR2 | Q9HBW0 | 713 |
| GNA15 | S1PR3 | Q99500 | 708 |
| GNA15 | NPFF | O15130 | 705 |
| GNA15 | ADRB2 | P07550 | 642 |
| GNA15 | GRK2 | P25098 | 642 |
| GNA15 | GNA14 | O95837 | 641 |
| GNA15 | C5AR1 | P21730 | 614 |
| GNA15 | NPFFR1 | Q9GZQ6 | 559 |
| GNA15 | SUCLG1 | P53597 | 532 |
| GNA15 | TAS1R2 | Q8TE23 | 528 |
| GNA15 | CXCR2 | P25025 | 517 |
| GNA15 | TAS1R3 | Q7RTX0 | 509 |
IntAct
14 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| GNA15 | HSPA8 | psi-mi:“MI:0914”(association) | 0.530 |
| KISS1R | GNA15 | psi-mi:“MI:0915”(physical association) | 0.400 |
| MLF1 | GNA15 | psi-mi:“MI:0915”(physical association) | 0.400 |
| Hacd3 | GNA15 | psi-mi:“MI:0915”(physical association) | 0.400 |
| GNA15 | MLF2 | psi-mi:“MI:0915”(physical association) | 0.400 |
| GNA15 | psi-mi:“MI:0915”(physical association) | 0.400 | |
| PSMD2 | GNA15 | psi-mi:“MI:0915”(physical association) | 0.400 |
| Usp19 | GNA15 | psi-mi:“MI:0915”(physical association) | 0.400 |
| GNA15 | FKBPL | psi-mi:“MI:0915”(physical association) | 0.400 |
| CACYBP | GNA15 | psi-mi:“MI:0915”(physical association) | 0.400 |
| GNA15 | AARSD1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| M | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (20): C2orf44 (Affinity Capture-MS), HSPA8 (Affinity Capture-MS), APPBP2 (Affinity Capture-MS), FECH (Affinity Capture-MS), GNA15 (Reconstituted Complex), GNA15 (Affinity Capture-Western), GNA15 (Reconstituted Complex), TTC1 (Two-hybrid), TTC1 (Affinity Capture-Western), GNA15 (Reconstituted Complex), GNA15 (Affinity Capture-Western), APPBP2 (Affinity Capture-MS), MNAT1 (Affinity Capture-MS), C2orf44 (Affinity Capture-MS), HSPA8 (Affinity Capture-MS)
ESM2 similar proteins: A8MTJ3, O14438, O15975, O70443, O73819, O95837, P04695, P11488, P16051, P16894, P19086, P19627, P21278, P21279, P23625, P29992, P30677, P30678, P30679, P38408, P38409, P38410, P38411, P38412, P41776, P43444, P45645, P50148, P53359, P82471, P87033, P87034, P91907, P91950, Q19572, Q21917, Q28294, Q2PKF4, Q2XSV9, Q4VT35
Diamond homologs: A8MTJ3, B0XRA0, B2RSH2, O13055, O13315, O15975, O15976, O42784, O70443, O73819, O74227, O74259, O88302, O95837, P04695, P04696, P04897, P04899, P08239, P08752, P08753, P08754, P09471, P0C7Q4, P10824, P10825, P11488, P16378, P16894, P18872, P19086, P19087, P19627, P20353, P20612, P21278, P21279, P23625, P27044, P27045
SIGNOR signaling
29 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| P2RY2 | “up-regulates activity” | GNA15 | binding |
| P2RY13 | “up-regulates activity” | GNA15 | binding |
| P2RY4 | “up-regulates activity” | GNA15 | binding |
| AGTR1 | “up-regulates activity” | GNA15 | binding |
| CHRM3 | “up-regulates activity” | GNA15 | binding |
| CYSLTR1 | “up-regulates activity” | GNA15 | binding |
| GALR2 | “up-regulates activity” | GNA15 | binding |
| FFAR2 | “up-regulates activity” | GNA15 | binding |
| P2RY6 | “up-regulates activity” | GNA15 | binding |
| BDKRB2 | “up-regulates activity” | GNA15 | binding |
| LPAR1 | “up-regulates activity” | GNA15 | binding |
| P2RY1 | “up-regulates activity” | GNA15 | binding |
| CHRM5 | “up-regulates activity” | GNA15 | binding |
| NMUR2 | “up-regulates activity” | GNA15 | binding |
| F2R | “up-regulates activity” | GNA15 | binding |
| HCRTR1 | “up-regulates activity” | GNA15 | binding |
| HTR2C | “up-regulates activity” | GNA15 | binding |
| MC3R | “up-regulates activity” | GNA15 | binding |
| F2RL2 | “up-regulates activity” | GNA15 | binding |
| MCHR2 | “up-regulates activity” | GNA15 | binding |
| LPAR3 | “up-regulates activity” | GNA15 | binding |
| F2RL1 | “up-regulates activity” | GNA15 | binding |
| CCKAR | “up-regulates activity” | GNA15 | binding |
| BDKRB1 | “up-regulates activity” | GNA15 | binding |
| CCKBR | “up-regulates activity” | GNA15 | binding |
| GPR132 | “up-regulates activity” | GNA15 | binding |
| PMAIP1 | “up-regulates activity” | GNA15 | phosphorylation |
| TRHR | “up-regulates activity” | GNA15 | binding |
| GNA15 | “up-regulates activity” | PLCB1 | binding |
Disease & clinical
Clinical variants and AI predictions
ClinVar
64 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 51 |
| Likely benign | 1 |
| Benign | 3 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
950 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 19:3136591:TTTGG:T | donor_gain | 1.0000 |
| 19:3136592:TTGG:T | donor_gain | 1.0000 |
| 19:3136593:TGG:T | donor_gain | 1.0000 |
| 19:3136594:GG:G | donor_gain | 1.0000 |
| 19:3136594:GGG:G | donor_gain | 1.0000 |
| 19:3136595:GG:G | donor_gain | 1.0000 |
| 19:3136596:G:GG | donor_gain | 1.0000 |
| 19:3148586:CCCA:C | acceptor_loss | 1.0000 |
| 19:3148589:A:AG | acceptor_gain | 1.0000 |
| 19:3148589:A:C | acceptor_loss | 1.0000 |
| 19:3148589:AG:A | acceptor_gain | 1.0000 |
| 19:3148590:G:GT | acceptor_gain | 1.0000 |
| 19:3148590:GG:G | acceptor_gain | 1.0000 |
| 19:3148590:GGC:G | acceptor_gain | 1.0000 |
| 19:3148771:GCAAG:G | donor_gain | 1.0000 |
| 19:3148774:AG:A | donor_gain | 1.0000 |
| 19:3148775:GG:G | donor_gain | 1.0000 |
| 19:3148776:G:GG | donor_gain | 1.0000 |
| 19:3148776:GTG:G | donor_loss | 1.0000 |
| 19:3150128:CA:C | acceptor_loss | 1.0000 |
| 19:3150129:A:AG | acceptor_gain | 1.0000 |
| 19:3150130:G:GA | acceptor_gain | 1.0000 |
| 19:3150130:GC:G | acceptor_gain | 1.0000 |
| 19:3150130:GCA:G | acceptor_gain | 1.0000 |
| 19:3150130:GCAC:G | acceptor_gain | 1.0000 |
| 19:3150130:GCACC:G | acceptor_gain | 1.0000 |
| 19:3150278:GCCGT:G | donor_gain | 1.0000 |
| 19:3150281:GTGTA:G | donor_gain | 1.0000 |
| 19:3150283:GTA:G | donor_gain | 1.0000 |
| 19:3150286:G:GG | donor_gain | 1.0000 |
AlphaMissense
2465 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 19:3155863:T:A | W219R | 1.000 |
| 19:3155863:T:C | W219R | 1.000 |
| 19:3148608:A:C | K55Q | 0.999 |
| 19:3148609:A:T | K55M | 0.999 |
| 19:3148610:G:C | K55N | 0.999 |
| 19:3148610:G:T | K55N | 0.999 |
| 19:3155865:G:C | W219C | 0.999 |
| 19:3155865:G:T | W219C | 0.999 |
| 19:3157816:A:T | K278I | 0.999 |
| 19:3148605:G:T | G54W | 0.998 |
| 19:3148606:G:A | G54E | 0.998 |
| 19:3148611:A:C | S56R | 0.998 |
| 19:3148613:C:A | S56R | 0.998 |
| 19:3148613:C:G | S56R | 0.998 |
| 19:3148628:G:C | Q61H | 0.998 |
| 19:3148628:G:T | Q61H | 0.998 |
| 19:3155875:T:C | F223L | 0.998 |
| 19:3155877:C:A | F223L | 0.998 |
| 19:3155877:C:G | F223L | 0.998 |
| 19:3136587:T:C | L46P | 0.997 |
| 19:3136595:G:C | G49R | 0.997 |
| 19:3148608:A:G | K55E | 0.997 |
| 19:3148612:G:T | S56I | 0.997 |
| 19:3148633:G:C | R63P | 0.997 |
| 19:3155830:G:C | D208H | 0.997 |
| 19:3155831:A:G | D208G | 0.997 |
| 19:3155832:C:A | D208E | 0.997 |
| 19:3155832:C:G | D208E | 0.997 |
| 19:3157807:T:C | F275S | 0.997 |
| 19:3157817:A:C | K278N | 0.997 |
dbSNP variants (sampled 300 via entrez): RS1000111596 (19:3162541 A>G), RS1000121611 (19:3162760 G>A), RS1000204914 (19:3135125 A>C,T), RS1000239405 (19:3137242 A>G), RS1000239753 (19:3140418 G>A), RS1000255629 (19:3135309 C>G,T), RS1000348924 (19:3144731 T>C,G), RS1000371945 (19:3144757 T>C), RS1000456546 (19:3154402 T>C,G), RS1000591831 (19:3140118 CATT>C), RS1000650127 (19:3147480 G>A), RS1000672573 (19:3142708 C>T), RS1000766403 (19:3154035 G>T), RS1000868163 (19:3158275 T>C,G), RS1000945022 (19:3148910 C>A,G)
Disease associations
OMIM: gene MIM:139314 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
11 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000675_10 | Heart failure | 6.000000e-06 |
| GCST002726_72 | Glucose homeostasis traits | 7.000000e-08 |
| GCST009798_49 | Asthma | 7.000000e-10 |
| GCST009817_4 | Clozapine-induced myocarditis in schizophrenia | 1.000000e-07 |
| GCST010042_35 | Asthma | 4.000000e-11 |
| GCST90002392_51 | Mean corpuscular volume | 2.000000e-09 |
| GCST90002396_8 | Mean reticulocyte volume | 2.000000e-09 |
| GCST90002397_398 | Mean spheric corpuscular volume | 3.000000e-10 |
| GCST90002398_100 | Neutrophil count | 5.000000e-13 |
| GCST90002407_351 | White blood cell count | 2.000000e-09 |
| GCST90014325_70 | Asthma | 9.000000e-09 |
EFO canonical traits (3, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0006830 | insulin metabolic clearance rate measurement |
| EFO:0010701 | mean reticulocyte volume |
| EFO:0004833 | neutrophil count |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL5482994 (PROTEIN COMPLEX)
Molecules with ChEMBL bioactivity
2 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 324,010 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1829174 | FASIGLIFAM | 3 | 815 |
| CHEMBL267476 | LINOLEIC ACID | 2 | 323,195 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
Binding affinities (BindingDB)
566 measured of 568 human assays (568 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| 1-[(2R)-4-[4-(1H-benzimidazol-2-yl)-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-(4-chloropyrazol-1-yl)ethanone | IC50 | 0.1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(1H-benzimidazol-2-yl)-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-(5-methylpyrazol-1-yl)ethanone | IC50 | 0.1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-[6-(2-aminoethyl)-1H-benzimidazol-2-yl]-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-(3,5-dimethyl-1,2,4-triazol-1-yl)ethanone | IC50 | 0.1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(6-chloro-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-pyrrolo[2,3-b]pyridin-1-ylethanone | IC50 | 0.2 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-pyrrolo[2,3-c]pyridin-1-ylethanone | IC50 | 0.2 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(1H-benzimidazol-2-yl)-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-(3-methylpyrazol-1-yl)ethanone | IC50 | 0.2 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 2-imidazo[4,5-b]pyridin-3-yl-1-[(2R)-4-[4-(1H-imidazo[4,5-b]pyridin-2-yl)-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]ethanone | IC50 | 0.3 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[2-[(2R)-4-[4-(1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-oxoethyl]-3,3-difluoroindol-2-one | IC50 | 0.3 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(5,6-difluoro-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 0.4 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(1H-benzimidazol-2-yl)-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-(6-methyl-3-pyridinyl)ethanone | IC50 | 0.4 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(5-chloro-4-methyl-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 0.5 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(6-fluoro-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 0.5 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(1H-benzimidazol-2-yl)-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-pyrazol-1-ylethanone | IC50 | 0.5 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-ethylpiperazin-1-yl]-2-pyrrolo[2,3-b]pyridin-1-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-2-methyl-4-[4-(4-methyl-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]piperazin-1-yl]-2-pyrrolo[2,3-b]pyridin-1-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(6-tert-butyl-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-pyrrolo[2,3-b]pyridin-1-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(5-chloro-6-fluoro-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-pyrrolo[2,3-b]pyridin-1-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(4,5-difluoro-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-pyrrolo[2,3-b]pyridin-1-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(1H-benzimidazol-2-yl)-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2S,6R)-4-[4-(6-chloro-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2,6-dimethylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(1H-benzimidazol-2-yl)-2-bromo-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(6-chloro-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 3-[2-[(2R)-4-[4-(6-chloro-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-oxoethyl]-1,3-benzoxazol-2-one | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 2-imidazo[4,5-b]pyridin-3-yl-1-[(2R)-2-methyl-4-[4-(6-methyl-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]piperazin-1-yl]ethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(6-tert-butyl-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(5-chloro-6-methyl-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 2-imidazo[4,5-b]pyridin-3-yl-1-[(2R)-2-methyl-4-[4-(6-propan-2-yl-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]piperazin-1-yl]ethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(5-chloro-6-fluoro-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 2-imidazo[4,5-b]pyridin-3-yl-1-[(2R)-2-methyl-4-[4-[6-(trifluoromethyl)-1H-benzimidazol-2-yl]-1,3-thiazol-5-yl]piperazin-1-yl]ethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-[5-chloro-6-(trifluoromethyl)-1H-benzimidazol-2-yl]-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(6-ethyl-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 2-imidazo[4,5-b]pyridin-3-yl-1-[(2R)-2-methyl-4-[4-(6-phenyl-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]piperazin-1-yl]ethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[2-[(2R)-4-[4-(1H-benzimidazol-2-yl)-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-oxoethyl]-3H-indol-2-one | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 3-[2-[(2R)-4-[4-(1H-benzimidazol-2-yl)-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-oxoethyl]-1H-imidazo[4,5-b]pyridin-2-one | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-pyrazolo[5,4-b]pyridin-1-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-(3-chloropyrrolo[2,3-b]pyridin-1-yl)ethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(1H-benzimidazol-2-yl)-2-ethyl-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(6-chloro-1H-benzimidazol-2-yl)-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-[6-(hydroxymethyl)-1H-benzimidazol-2-yl]-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(6-cyclopropyl-1H-benzimidazol-2-yl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-[6-(2-hydroxyethoxy)-1H-benzimidazol-2-yl]-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(6-acetyl-1H-benzimidazol-2-yl)-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-[6-(1-hydroxyethyl)-1H-benzimidazol-2-yl]-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-imidazo[4,5-b]pyridin-3-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| methyl 2-[5-[(3R)-4-(2-imidazo[4,5-b]pyridin-3-ylacetyl)-3-methylpiperazin-1-yl]-2-(trifluoromethyl)-1,3-thiazol-4-yl]-3H-benzimidazole-5-carboxylate | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 2-imidazo[4,5-b]pyridin-3-yl-1-[(2R)-2-methyl-4-[4-(7H-purin-8-yl)-2-(trifluoromethyl)-1,3-thiazol-5-yl]piperazin-1-yl]ethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 2-(benzimidazol-1-yl)-1-[(2R)-4-[4-(1H-benzimidazol-2-yl)-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]ethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(1H-benzimidazol-2-yl)-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-quinolin-8-ylethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(1H-benzimidazol-2-yl)-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-(4-methylpyrazol-1-yl)ethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(1H-benzimidazol-2-yl)-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-(3,5-dimethylpyrazol-1-yl)ethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
| 1-[(2R)-4-[4-(1H-benzimidazol-2-yl)-2-(trifluoromethyl)-1,3-thiazol-5-yl]-2-methylpiperazin-1-yl]-2-[3-(trifluoromethyl)pyrazol-1-yl]ethanone | IC50 | 1 nM | US-9266876: 4-(benzoimidazol-2-yl)-thiazole compounds and related aza derivatives |
ChEMBL bioactivities
5 potent at pChembl≥5 of 5 total, top 5 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.56 | EC50 | 27.4 | nM | CHEMBL5422928 |
| 7.45 | EC50 | 35.8 | nM | FASIGLIFAM |
| 7.32 | EC50 | 48 | nM | GW9508 |
| 7.03 | EC50 | 93.3 | nM | CHEMBL2151289 |
| 5.00 | EC50 | 1.01e+04 | nM | LINOLEIC ACID |
PubChem BioAssay actives
4 with measured affinity, of 8 total; 4 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 2-[(S)-[4-[[3-(2,6-dimethylphenyl)phenyl]methoxy]phenyl]sulfinyl]acetic acid | 1996572: Agonist activity at human GPR40/Galpha-16 expressed in HEK293 cells by Fluo4-AM dye based intracellular calcium flux assay | ec50 | 0.0274 | uM |
| 2-[(3S)-6-[[3-[2,6-dimethyl-4-(3-methylsulfonylpropoxy)phenyl]phenyl]methoxy]-2,3-dihydro-1-benzofuran-3-yl]acetic acid | 1996572: Agonist activity at human GPR40/Galpha-16 expressed in HEK293 cells by Fluo4-AM dye based intracellular calcium flux assay | ec50 | 0.0358 | uM |
| 3-[4-[(3-phenoxyphenyl)methylamino]phenyl]propanoic acid | 2087777: Agonist activity at human GPR40/Galpha-16 expressed in HEK293 cells by Fluo4-AM dye based intracellular calcium flux assay | ec50 | 0.0480 | uM |
| (3R)-3-[4-[[4-(3-methoxyphenyl)phenyl]methoxy]phenyl]hex-4-ynoic acid | 1996572: Agonist activity at human GPR40/Galpha-16 expressed in HEK293 cells by Fluo4-AM dye based intracellular calcium flux assay | ec50 | 0.0933 | uM |
CTD chemical–gene interactions
51 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | affects methylation, decreases methylation | 2 |
| Nickel | increases expression | 2 |
| Tobacco Smoke Pollution | affects expression, increases expression | 2 |
| GSK-J4 | increases expression | 1 |
| citral dimethyl acetal | increases response to substance, increases activity | 1 |
| triphenyl phosphate | affects expression | 1 |
| bisphenol A | decreases methylation | 1 |
| geraniol | increases response to substance, increases activity | 1 |
| pelargonic acid | increases response to substance, increases activity | 1 |
| azelaic acid | increases activity, increases response to substance | 1 |
| pyrogallol 1,3-dimethyl ether | increases expression, affects cotreatment, affects localization | 1 |
| alpha-ionone | increases activity, increases response to substance | 1 |
| 2-heptanone | increases response to substance, decreases activity | 1 |
| butyraldehyde | increases expression | 1 |
| benzo(e)pyrene | increases methylation | 1 |
| aflatoxin B2 | increases methylation | 1 |
| nickel sulfate | increases expression | 1 |
| octanoic acid | increases response to substance, increases activity | 1 |
| caprylic aldehyde | increases response to substance, increases activity | 1 |
| 2,4-decadienal | increases response to substance, increases activity | 1 |
| 2,6-nonadienal | increases response to substance, increases activity | 1 |
| 2-palmitoylglycerol | increases expression | 1 |
| 2,4-nonadienal | increases response to substance, increases activity | 1 |
| erucylphospho-N,N,N-trimethylpropylammonium | increases expression | 1 |
| bourgeonal | increases response to substance, increases activity | 1 |
| abrine | increases expression | 1 |
| alpha-methyl-3,4-methylene-dioxyhydrocinnamic aldehyde | increases response to substance, increases activity | 1 |
| bisphenol S | increases methylation | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
| Acetaminophen | decreases expression | 1 |
ChEMBL screening assays
3 unique, capped per target: 2 binding, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5349699 | Binding | Agonist activity at human GPR40/Galpha-16 expressed in HEK293 cells by Fluo4-AM dye based intracellular calcium flux assay | Discovery of orally effective and safe GPR40 agonists by incorporating a chiral, rigid and polar sulfoxide into β-position to the carboxylic acid. — Eur J Med Chem |
| CHEMBL5528508 | Functional | Agonist activity at human GPR40/Galpha-16 expressed in HEK293 cells by Fluo4-AM dye based intracellular calcium flux assay | Synthetic GPR40/FFAR1 agonists: An exhaustive survey on the most recent chemical classes and their structure-activity relationships. — Eur J Med Chem |
Cellosaurus cell lines
127 cell lines: 116 spontaneously immortalized cell line, 8 transformed cell line, 3 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_5I82 | 1321N1 (+Galpha16) AequoScreen | Cancer cell line | Male |
| CVCL_5I89 | CHO-K1 (+Galpha16) AequoScreen | Spontaneously immortalized cell line | Female |
| CVCL_5I97 | HEK293 AequoScreen | Transformed cell line | Female |
| CVCL_B0GV | I3.4.2 | Cancer cell line | Male |
| CVCL_E5JS | CHO-K1/Galpha15/MRGPRX1 | Spontaneously immortalized cell line | Female |
| CVCL_F2AJ | CHO-K1 (+Galpha16) AequoScreen Serotonin 5-HT2A | Spontaneously immortalized cell line | Female |
| CVCL_F2AK | CHO-K1 (+Galpha16) AequoScreen Cannabinoid CB1 | Spontaneously immortalized cell line | Female |
| CVCL_F2AL | CHO-K1 (+Galpha16) AequoScreen Opioid Mu (OP3) | Spontaneously immortalized cell line | Female |
| CVCL_H357 | 1321N1/P2Y12/Galpha15 | Cancer cell line | Male |
| CVCL_H362 | 293/ADORA1/Galpha15 | Transformed cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): heart failure, myocarditis