GNB1-DT

Summary

GNB1-DT (GNB1 divergent transcript, HGNC:55772) is a long non-coding RNA gene on chromosome 1p36.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55772
Approved symbol	GNB1-DT
Name	GNB1 divergent transcript
Location	1p36.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231050
Ensembl biotype	lncRNA
Entrez	105378949
RNAcentral	URS0001BBE638 — lncRNA, 903 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 18 — 18 lncRNA

ENST00000412228, ENST00000685593, ENST00000686550, ENST00000689170, ENST00000702668, ENST00000798456, ENST00000798457, ENST00000798458, ENST00000798459, ENST00000798460, ENST00000798461, ENST00000798462, ENST00000798463, ENST00000798464, ENST00000798465, ENST00000798466, ENST00000798467, ENST00000798468

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000412228 — 2 exons

Exon	Start	End
ENSE00001607876	1891471	1891851
ENSE00001780565	1892134	1892658

Expression profiles

Bgee: expression breadth ubiquitous, 125 present calls, max score 72.56.

Top tissues by expression

125 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
colonic epithelium	UBERON:0000397	72.56	silver quality
left testis	UBERON:0004533	68.45	gold quality
mucosa of transverse colon	UBERON:0004991	67.86	gold quality
testis	UBERON:0000473	67.19	gold quality
muscle of leg	UBERON:0001383	67.17	gold quality
gastrocnemius	UBERON:0001388	67.11	gold quality
skeletal muscle tissue	UBERON:0001134	65.81	gold quality
putamen	UBERON:0001874	65.35	gold quality
anterior cingulate cortex	UBERON:0009835	65.15	gold quality
ventricular zone	UBERON:0003053	65.09	gold quality
nucleus accumbens	UBERON:0001882	65.08	gold quality
adenohypophysis	UBERON:0002196	64.98	gold quality
hindlimb stylopod muscle	UBERON:0004252	64.70	gold quality
right testis	UBERON:0004534	64.60	gold quality
right frontal lobe	UBERON:0002810	64.56	gold quality
ganglionic eminence	UBERON:0004023	64.40	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	64.13	gold quality
pituitary gland	UBERON:0000007	63.93	gold quality
cerebral cortex	UBERON:0000956	63.89	gold quality
brain	UBERON:0000955	63.75	gold quality
cortical plate	UBERON:0005343	63.65	gold quality
frontal cortex	UBERON:0001870	63.60	gold quality
Ammon’s horn	UBERON:0001954	63.52	gold quality
substantia nigra	UBERON:0002038	63.41	gold quality
Brodmann (1909) area 9	UBERON:0013540	63.40	gold quality
caudate nucleus	UBERON:0001873	63.27	gold quality
prefrontal cortex	UBERON:0000451	63.18	gold quality
right hemisphere of cerebellum	UBERON:0014890	63.16	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	63.04	gold quality
hypothalamus	UBERON:0001898	63.00	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.29

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.