GNG5
gene geneOn this page
Summary
GNG5 (G protein subunit gamma 5, HGNC:4408) is a protein-coding gene on chromosome 1p22.3, encoding Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 (P63218). Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems.
G proteins are trimeric (alpha-beta-gamma) membrane-associated proteins that regulate flow of information from cell surface receptors to a variety of internal metabolic effectors. Interaction of a G protein with its activated receptor promotes exchange of GTP for GDP that is bound to the alpha subunit. The alpha-GTP complex dissociates from the beta-gamma heterodimer so that the subunits, in turn, may interact with and regulate effector molecules (Gilman, 1987 [PubMed 3113327]; summary by Ahmad et al., 1995) [PubMed 7606925].
Source: NCBI Gene 2787 — RefSeq curated summary.
At a glance
- Clinical variants (ClinVar): 8 total
- MANE Select transcript:
NM_005274
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:4408 |
| Approved symbol | GNG5 |
| Name | G protein subunit gamma 5 |
| Location | 1p22.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000174021 |
| Ensembl biotype | protein_coding |
| OMIM | 600874 |
| Entrez | 2787 |
Gene structure
Transcript identifiers
Ensembl transcripts: 7 — 5 protein_coding, 2 protein_coding_CDS_not_defined
ENST00000370641, ENST00000370645, ENST00000487806, ENST00000686161, ENST00000689285, ENST00000880086, ENST00000923435
RefSeq mRNA: 1 — MANE Select: NM_005274
NM_005274
CCDS: CCDS696
Canonical transcript exons
ENST00000370645 — 4 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001453220 | 84506011 | 84506301 |
| ENSE00001453221 | 84506436 | 84506581 |
| ENSE00001921485 | 84498325 | 84498548 |
| ENSE00003459775 | 84501826 | 84501970 |
Expression profiles
Bgee: expression breadth ubiquitous, 134 present calls, max score 98.84.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 208.8821 / max 1186.1659, expressed in 1828 samples.
FANTOM5 promoters (5 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 12982 | 180.2863 | 1828 |
| 12984 | 18.6127 | 1741 |
| 12981 | 8.9111 | 1742 |
| 12985 | 0.9396 | 598 |
| 12983 | 0.1326 | 38 |
Top tissues by expression
134 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| mucosa of transverse colon | UBERON:0004991 | 98.84 | gold quality |
| heart left ventricle | UBERON:0002084 | 98.80 | gold quality |
| apex of heart | UBERON:0002098 | 98.66 | gold quality |
| right atrium auricular region | UBERON:0006631 | 98.66 | gold quality |
| heart | UBERON:0000948 | 98.63 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 98.62 | gold quality |
| right lung | UBERON:0002167 | 98.58 | gold quality |
| ventricular zone | UBERON:0003053 | 98.53 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 98.50 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 98.49 | gold quality |
| metanephros cortex | UBERON:0010533 | 98.45 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 98.40 | gold quality |
| granulocyte | CL:0000094 | 98.38 | gold quality |
| gastrocnemius | UBERON:0001388 | 98.36 | gold quality |
| leukocyte | CL:0000738 | 98.30 | gold quality |
| monocyte | CL:0000576 | 98.28 | gold quality |
| transverse colon | UBERON:0001157 | 98.25 | gold quality |
| body of stomach | UBERON:0001161 | 98.20 | gold quality |
| body of pancreas | UBERON:0001150 | 98.19 | gold quality |
| bone marrow | UBERON:0002371 | 98.19 | gold quality |
| ganglionic eminence | UBERON:0004023 | 98.19 | gold quality |
| spleen | UBERON:0002106 | 98.10 | gold quality |
| tonsil | UBERON:0002372 | 98.10 | gold quality |
| bone marrow cell | CL:0002092 | 98.08 | gold quality |
| ascending aorta | UBERON:0001496 | 98.07 | gold quality |
| thoracic aorta | UBERON:0001515 | 98.07 | gold quality |
| left coronary artery | UBERON:0001626 | 98.05 | gold quality |
| cortex of kidney | UBERON:0001225 | 98.04 | gold quality |
| blood | UBERON:0000178 | 98.03 | gold quality |
| muscle of leg | UBERON:0001383 | 98.03 | gold quality |
Single-cell (SCXA)
Detected in 12 experiment(s), a significant marker in 9.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-56 | yes | 2166.46 |
| E-GEOD-93593 | yes | 480.98 |
| E-CURD-122 | yes | 56.40 |
| E-HCAD-5 | yes | 41.78 |
| E-GEOD-137537 | yes | 30.71 |
| E-MTAB-7316 | yes | 24.29 |
| E-CURD-46 | yes | 19.22 |
| E-MTAB-10042 | yes | 9.47 |
| E-MTAB-6819 | no | 1040.62 |
| E-GEOD-111727 | no | 717.37 |
| E-MTAB-3929 | no | 447.65 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
62 targeting GNG5, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6758-5P | 100.00 | 66.21 | 1470 |
| HSA-MIR-6856-5P | 100.00 | 65.47 | 1298 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-450A-1-3P | 100.00 | 69.33 | 1837 |
| HSA-MIR-4500 | 99.99 | 72.72 | 2367 |
| HSA-LET-7A-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7B-5P | 99.98 | 72.31 | 1790 |
| HSA-LET-7C-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7E-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7F-5P | 99.98 | 72.56 | 1784 |
| HSA-LET-7G-5P | 99.98 | 72.37 | 1784 |
| HSA-LET-7I-5P | 99.98 | 72.37 | 1788 |
| HSA-MIR-98-5P | 99.98 | 72.33 | 1787 |
| HSA-MIR-485-3P | 99.98 | 70.68 | 1585 |
| HSA-MIR-539-3P | 99.98 | 70.74 | 1616 |
| HSA-LET-7D-5P | 99.96 | 71.76 | 1632 |
| HSA-MIR-4458 | 99.96 | 71.64 | 1650 |
| HSA-MIR-493-5P | 99.96 | 72.47 | 2382 |
| HSA-LET-7C-3P | 99.95 | 73.42 | 2862 |
| HSA-MIR-5680 | 99.91 | 69.83 | 3421 |
| HSA-MIR-3140-3P | 99.88 | 68.47 | 2069 |
| HSA-LET-7A-2-3P | 99.87 | 70.53 | 1921 |
| HSA-MIR-3919 | 99.87 | 69.45 | 2489 |
| HSA-LET-7G-3P | 99.85 | 70.43 | 1929 |
| HSA-MIR-4420 | 99.82 | 70.08 | 1624 |
| HSA-MIR-3121-3P | 99.82 | 71.96 | 3630 |
| HSA-MIR-8080 | 99.82 | 67.52 | 1342 |
| HSA-MIR-181B-2-3P | 99.81 | 70.06 | 1646 |
| HSA-MIR-181B-3P | 99.81 | 70.06 | 1646 |
| HSA-MIR-7154-5P | 99.69 | 70.52 | 1900 |
Literature-anchored findings (GeneRIF, showing 6)
- rs13093 in the promoter region of GNG5 may be associated with an increased risk of essential hypertension in the Polish population. (PMID:26574874)
- GNG5 was differently expressed in melanosis coli tissues.GNG5 expression was related to cell apoptosis. (PMID:30559147)
- MicroRNA-675-3p regulates IL-1beta-stimulated human chondrocyte apoptosis and cartilage degradation by targeting GNG5. (PMID:32336544)
- GNG5 is an unfavourable independent prognostic indicator of gliomas. (PMID:33000557)
- Exosomes derived from M1 macrophages inhibit the proliferation of the A549 and H1299 lung cancer cell lines via the miRNA-let-7b-5p-GNG5 axis. (PMID:36643646)
- Transcription factor YY1-activated GNG5 facilitates glioblastoma cell growth, invasion, stemness and glycolysis through Wnt/beta-catenin pathway. (PMID:39448763)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | gng5 | ENSDARG00000039830 |
| mus_musculus | Gng5 | ENSMUSG00000068523 |
| rattus_norvegicus | Gng5 | ENSRNOG00000084618 |
| drosophila_melanogaster | Ggamma1 | FBGN0004921 |
Paralogs (11): GNG11 (ENSG00000127920), GNGT1 (ENSG00000127928), GNG5B (ENSG00000133136), GNG3 (ENSG00000162188), GNGT2 (ENSG00000167083), GNG8 (ENSG00000167414), GNG4 (ENSG00000168243), GNG12 (ENSG00000172380), GNG7 (ENSG00000176533), GNG2 (ENSG00000186469), GNG10 (ENSG00000242616)
Protein
Protein identifiers
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 — P63218 (reviewed: P63218)
All UniProt accessions (1): P63218
UniProt curated annotations — full annotation on UniProt →
Function. Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
Subunit / interactions. G proteins are composed of 3 units, alpha, beta and gamma.
Subcellular location. Cell membrane.
Similarity. Belongs to the G protein gamma family.
RefSeq proteins (1): NP_005265* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001770 | G-protein_gamma | Family |
| IPR015898 | G-protein_gamma-like_dom | Domain |
| IPR036284 | GGL_sf | Homologous_superfamily |
Pfam: PF00631
UniProt features (7 total): modified residue 3, initiator methionine 1, chain 1, propeptide 1, lipid moiety-binding region 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P63218-F1 | 88.89 | 0.61 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (4): 2, 2, 65, 65
Function
Pathways and Gene Ontology
Reactome pathways
29 pathways
| ID | Pathway |
|---|---|
| R-HSA-1296041 | Activation of G protein gated Potassium channels |
| R-HSA-163359 | Glucagon signaling in metabolic regulation |
| R-HSA-202040 | G-protein activation |
| R-HSA-381676 | Glucagon-like Peptide-1 (GLP1) regulates insulin secretion |
| R-HSA-392170 | ADP signalling through P2Y purinoceptor 12 |
| R-HSA-392451 | G beta:gamma signalling through PI3Kgamma |
| R-HSA-392851 | Prostacyclin signalling through prostacyclin receptor |
| R-HSA-400042 | Adrenaline,noradrenaline inhibits insulin secretion |
| R-HSA-4086398 | Ca2+ pathway |
| R-HSA-416476 | G alpha (q) signalling events |
| R-HSA-416482 | G alpha (12/13) signalling events |
| R-HSA-418217 | G beta:gamma signalling through PLC beta |
| R-HSA-418555 | G alpha (s) signalling events |
| R-HSA-418592 | ADP signalling through P2Y purinoceptor 1 |
| R-HSA-418594 | G alpha (i) signalling events |
| R-HSA-418597 | G alpha (z) signalling events |
| R-HSA-420092 | Glucagon-type ligand receptors |
| R-HSA-428930 | Thromboxane signalling through TP receptor |
| R-HSA-432040 | Vasopressin regulates renal water homeostasis via Aquaporins |
| R-HSA-456926 | Thrombin signalling through proteinase activated receptors (PARs) |
| R-HSA-500657 | Presynaptic function of Kainate receptors |
| R-HSA-6814122 | Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding |
| R-HSA-8964315 | G beta:gamma signalling through BTK |
| R-HSA-8964616 | G beta:gamma signalling through CDC42 |
| R-HSA-9009391 | Extra-nuclear estrogen signaling |
| R-HSA-9634597 | GPER1 signaling |
| R-HSA-9660821 | ADORA2B mediated anti-inflammatory cytokines production |
| R-HSA-9856530 | High laminar flow shear stress activates signaling by PIEZO1 and PECAM1:CDH5:KDR in endothelial cells |
| R-HSA-997272 | Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits |
MSigDB gene sets: 247 (showing top):
REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS, REACTOME_ADRENALINE_NORADRENALINE_INHIBITS_INSULIN_SECRETION, REACTOME_POTASSIUM_CHANNELS, REACTOME_INWARDLY_RECTIFYING_K_CHANNELS, REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION, REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, MORF_HDAC1, MORF_HDAC2, REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION, REACTOME_G_PROTEIN_ACTIVATION, MORF_BUB3, MORF_PRKDC, REACTOME_G_BETA_GAMMA_SIGNALLING_THROUGH_PI3KGAMMA, REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING
GO Biological Process (2): signal transduction (GO:0007165), G protein-coupled receptor signaling pathway (GO:0007186)
GO Molecular Function (4): GTPase activity (GO:0003924), PDZ domain binding (GO:0030165), G-protein beta-subunit binding (GO:0031681), protein binding (GO:0005515)
GO Cellular Component (4): heterotrimeric G-protein complex (GO:0005834), plasma membrane (GO:0005886), membrane (GO:0016020), extracellular exosome (GO:0070062)
Reactome top-level categories
Rollup of top-12 pathways:
| Category | Pathways |
|---|---|
| GPCR downstream signalling | 5 |
| Signal amplification | 3 |
| Regulation of insulin secretion | 2 |
| G-protein beta:gamma signalling | 2 |
| G protein gated Potassium channels | 1 |
| Integration of energy metabolism | 1 |
| Opioid Signalling | 1 |
| Platelet homeostasis | 1 |
| Beta-catenin independent WNT signaling | 1 |
| Class B/2 (Secretin family receptors) | 1 |
| Aquaporin-mediated transport | 1 |
| Platelet activation, signaling and aggregation | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| G protein-coupled receptor activity | 1 |
| signal transduction | 1 |
| ribonucleoside triphosphate phosphatase activity | 1 |
| protein domain specific binding | 1 |
| protein binding | 1 |
| binding | 1 |
| extrinsic component of cytoplasmic side of plasma membrane | 1 |
| plasma membrane protein complex | 1 |
| GTPase complex | 1 |
| membrane | 1 |
| cell periphery | 1 |
| cellular anatomical structure | 1 |
| extracellular vesicle | 1 |
Protein interactions and networks
STRING
0 interactions, top by confidence (×1000):
IntAct
94 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| GNB1 | GNG5 | psi-mi:“MI:0915”(physical association) | 0.740 |
| GNG5 | GNB1 | psi-mi:“MI:0914”(association) | 0.740 |
| NFKBIA | POLRMT | psi-mi:“MI:0914”(association) | 0.670 |
| GNG5 | GNB2 | psi-mi:“MI:0914”(association) | 0.640 |
| GNG5 | GNAI1 | psi-mi:“MI:0914”(association) | 0.640 |
| GNAI3 | RGS12 | psi-mi:“MI:0914”(association) | 0.640 |
| GNG5 | GNB5 | psi-mi:“MI:0914”(association) | 0.620 |
| GNG5 | GNB5 | psi-mi:“MI:0915”(physical association) | 0.620 |
| GNG5 | GOLGA2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GNG5 | TRAF1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT31 | GNG5 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GNG5 | KRT40 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MDFI | GNG5 | psi-mi:“MI:0915”(physical association) | 0.560 |
| EPS15L1 | GNG5 | psi-mi:“MI:0915”(physical association) | 0.560 |
| AMOTL2 | GNG5 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GNG5 | KRT31 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GNG5 | AMOTL2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TRAF1 | GNG5 | psi-mi:“MI:0915”(physical association) | 0.560 |
BioGRID (131): GOLGA2 (Two-hybrid), KRT31 (Two-hybrid), MDFI (Two-hybrid), TRAF1 (Two-hybrid), AMOTL2 (Two-hybrid), EPS15L1 (Two-hybrid), KRT40 (Two-hybrid), GNG5 (Affinity Capture-MS), GNG5 (Affinity Capture-MS), GNG5 (Affinity Capture-MS), GNG5 (Affinity Capture-MS), GNG5 (Affinity Capture-MS), GNG5 (Affinity Capture-MS), GNG5 (Affinity Capture-MS), GNG5 (Affinity Capture-MS)
ESM2 similar proteins: A0A804HLA8, O14610, O60262, O97564, P02698, P30671, P38040, P43425, P50150, P50151, P50153, P50154, P54406, P59768, P61952, P61953, P61954, P63077, P63078, P63210, P63211, P63212, P63213, P63214, P63215, P63216, P63217, P63218, P63219, Q28024, Q4VT26, Q5E9F0, Q5R639, Q5R7U4, Q5RBQ0, Q5REH7, Q61012, Q61016, Q61017, Q6CPB4
Diamond homologs: A0A804HLA8, O60262, P30671, P38040, P43425, P50150, P50151, P50153, P59768, P63077, P63078, P63212, P63213, P63214, P63215, P63216, P63217, P63218, P63219, Q28024, Q4VT26, Q5R639, Q5R7U4, Q5RBQ0, Q5REH7, Q61016, Q80SZ7, Q9CXP8, Q9DAS9, Q9UBI6, Q9UK08, O14610, O97564, P02698, P50154, P54406, P61952, P61953, P61954, P63210
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 82 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| ADP signalling through P2Y purinoceptor 12 | 10 | 75.2× | 3e-15 |
| Prostacyclin signalling through prostacyclin receptor | 7 | 63.8× | 4e-10 |
| G beta:gamma signalling through BTK | 6 | 57.7× | 2e-08 |
| Adenylate cyclase inhibitory pathway | 5 | 57.7× | 3e-07 |
| G beta:gamma signalling through PLC beta | 6 | 51.9× | 3e-08 |
| G beta:gamma signalling through CDC42 | 6 | 51.9× | 3e-08 |
| Presynaptic function of Kainate receptors | 6 | 49.4× | 4e-08 |
| Adrenaline,noradrenaline inhibits insulin secretion | 8 | 47.7× | 2e-10 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| G protein-coupled receptor signaling pathway | 11 | 5.2× | 2e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
8 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 5 |
| Likely benign | 0 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
294 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:84498549:CT:C | acceptor_loss | 1.0000 |
| 1:84498549:C:CC | acceptor_gain | 0.9900 |
| 1:84501865:T:A | donor_gain | 0.9900 |
| 1:84501971:CTAT:C | acceptor_loss | 0.9900 |
| 1:84501972:T:G | acceptor_loss | 0.9900 |
| 1:84506009:A:AC | donor_gain | 0.9900 |
| 1:84506010:C:CC | donor_gain | 0.9900 |
| 1:84498554:A:AC | acceptor_gain | 0.9800 |
| 1:84501819:AACTT:A | donor_loss | 0.9800 |
| 1:84501820:ACTTA:A | donor_loss | 0.9800 |
| 1:84501821:CTTA:C | donor_loss | 0.9800 |
| 1:84501822:TTACC:T | donor_loss | 0.9800 |
| 1:84501823:TA:T | donor_loss | 0.9800 |
| 1:84506010:CTT:C | donor_gain | 0.9800 |
| 1:84506011:TTT:T | donor_gain | 0.9800 |
| 1:84506012:TTT:T | donor_gain | 0.9800 |
| 1:84498544:GAAAC:G | acceptor_gain | 0.9700 |
| 1:84498554:A:C | acceptor_gain | 0.9700 |
| 1:84501689:T:A | donor_gain | 0.9700 |
| 1:84501971:C:CC | acceptor_gain | 0.9700 |
| 1:84506008:CACTT:C | donor_gain | 0.9700 |
| 1:84498546:AAC:A | acceptor_gain | 0.9600 |
| 1:84501845:C:CT | donor_gain | 0.9600 |
| 1:84501846:T:TT | donor_gain | 0.9600 |
| 1:84506007:TCA:T | donor_loss | 0.9600 |
| 1:84506008:CACT:C | donor_loss | 0.9600 |
| 1:84506009:A:C | donor_loss | 0.9600 |
| 1:84498547:AC:A | acceptor_gain | 0.9500 |
| 1:84498548:CC:C | acceptor_gain | 0.9500 |
| 1:84501970:CCTAT:C | acceptor_gain | 0.9500 |
AlphaMissense
433 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 1:84501938:G:C | F38L | 0.999 |
| 1:84501938:G:T | F38L | 0.999 |
| 1:84501940:A:G | F38L | 0.999 |
| 1:84501875:G:C | F59L | 0.998 |
| 1:84501875:G:T | F59L | 0.998 |
| 1:84501877:A:G | F59L | 0.998 |
| 1:84501877:A:T | F59I | 0.997 |
| 1:84501948:A:G | L35S | 0.997 |
| 1:84501957:G:T | A32D | 0.997 |
| 1:84501881:A:C | N57K | 0.996 |
| 1:84501881:A:T | N57K | 0.996 |
| 1:84501958:C:G | A32P | 0.996 |
| 1:84501877:A:C | F59V | 0.995 |
| 1:84501939:A:G | F38S | 0.995 |
| 1:84501961:C:G | A31P | 0.995 |
| 1:84506042:A:G | L17P | 0.995 |
| 1:84501876:A:G | F59S | 0.994 |
| 1:84501937:A:G | C39R | 0.994 |
| 1:84501876:A:C | F59C | 0.993 |
| 1:84501909:A:G | L48P | 0.993 |
| 1:84501909:A:T | L48Q | 0.993 |
| 1:84501915:T:A | D46V | 0.993 |
| 1:84501915:T:C | D46G | 0.993 |
| 1:84501935:A:C | C39W | 0.992 |
| 1:84506042:A:T | L17H | 0.992 |
| 1:84501906:A:G | L49P | 0.991 |
| 1:84501915:T:G | D46A | 0.991 |
| 1:84501936:C:T | C39Y | 0.991 |
| 1:84506019:G:T | R25S | 0.991 |
| 1:84506031:C:G | A21P | 0.991 |
dbSNP variants (sampled 300 via entrez): RS1000162749 (1:84502854 G>C), RS1000484855 (1:84499206 T>C), RS1000619714 (1:84503204 G>T), RS1000656357 (1:84503946 T>C), RS1001336357 (1:84499475 T>C), RS1001489782 (1:84499148 G>A), RS1001987266 (1:84506353 C>T), RS1002185600 (1:84505836 C>T), RS1002607059 (1:84508509 CT>C), RS1002625224 (1:84506455 A>C), RS1002706419 (1:84505621 G>A), RS1003009928 (1:84500944 C>T), RS1003168553 (1:84500554 T>G), RS1003338371 (1:84502461 C>T), RS1003612888 (1:84507230 G>A)
Disease associations
OMIM: gene MIM:600874 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
32 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | affects expression, increases methylation | 2 |
| sodium arsenite | decreases expression, increases expression | 2 |
| aristolochic acid I | decreases expression, increases expression | 1 |
| FR900359 | decreases phosphorylation | 1 |
| daidzein | affects cotreatment, affects expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| lead acetate | increases expression | 1 |
| daidzin | affects expression, affects cotreatment | 1 |
| genistin | affects cotreatment, affects expression | 1 |
| glycitein | affects cotreatment, affects expression | 1 |
| glycitin | affects cotreatment, affects expression | 1 |
| ICG 001 | increases expression | 1 |
| bisphenol S | affects cotreatment, increases expression | 1 |
| jinfukang | affects cotreatment, decreases expression | 1 |
| 4-(4-((5-(4,5-dimethyl-2-nitrophenyl)-2-furanyl)methylene)-4,5-dihydro-3-methyl-5-oxo-1H-pyrazol-1-yl)benzoic acid | decreases expression | 1 |
| Atrazine | increases expression | 1 |
| Caffeine | increases phosphorylation | 1 |
| Chelating Agents | affects binding, increases expression | 1 |
| Cisplatin | affects cotreatment, decreases expression | 1 |
| Copper | affects binding, increases expression | 1 |
| Dexamethasone | affects cotreatment, increases expression | 1 |
| Indomethacin | affects cotreatment, increases expression | 1 |
| Ivermectin | decreases expression | 1 |
| Potassium Dichromate | increases expression | 1 |
| Thiram | increases expression | 1 |
| Tobacco Smoke Pollution | affects expression | 1 |
| Tretinoin | increases expression | 1 |
| Urethane | decreases expression | 1 |
| 1-Methyl-3-isobutylxanthine | increases expression, affects cotreatment | 1 |
| Cyclosporine | increases expression | 1 |
Cellosaurus cell lines
3 cell lines: 2 cancer cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B2XW | Abcam HEK293T GNG5 KO | Transformed cell line | Female |
| CVCL_SQ18 | HAP1 GNG5 (-) 1 | Cancer cell line | Male |
| CVCL_XP24 | HAP1 GNG5 (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.