GOLPH3-DT

Summary

GOLPH3-DT (GOLPH3 divergent transcript, HGNC:55231) is a long non-coding RNA gene on chromosome 5p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55231
Approved symbol	GOLPH3-DT
Name	GOLPH3 divergent transcript
Location	5p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000272086
Ensembl biotype	lncRNA
Entrez	118597838
RNAcentral	URS0002A3F8FA — lncRNA, 1926 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000606994, ENST00000787374, ENST00000787375, ENST00000787376

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000606994 — 1 exons

Exon	Start	End
ENSE00004164871	32173960	32175885

Expression profiles

Bgee: expression breadth ubiquitous, 196 present calls, max score 91.46.

Top tissues by expression

244 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
pancreatic ductal cell	CL:0002079	91.46	silver quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.02	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	86.85	gold quality
sperm	CL:0000019	86.13	gold quality
bronchial epithelial cell	CL:0002328	84.68	gold quality
calcaneal tendon	UBERON:0003701	83.29	gold quality
parotid gland	UBERON:0001831	83.00	gold quality
bronchus	UBERON:0002185	82.71	gold quality
mucosa of stomach	UBERON:0001199	80.65	gold quality
lower esophagus muscularis layer	UBERON:0035833	80.56	gold quality
lower esophagus	UBERON:0013473	80.49	gold quality
amniotic fluid	UBERON:0000173	80.07	gold quality
endothelial cell	CL:0000115	79.94	gold quality
right uterine tube	UBERON:0001302	79.81	gold quality
tendon	UBERON:0000043	79.37	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	79.31	gold quality
muscle layer of sigmoid colon	UBERON:0035805	79.30	gold quality
mucosa of transverse colon	UBERON:0004991	78.61	gold quality
gastrocnemius	UBERON:0001388	78.43	gold quality
muscle of leg	UBERON:0001383	78.38	gold quality
caput epididymis	UBERON:0004358	78.22	gold quality
transverse colon	UBERON:0001157	78.13	gold quality
popliteal artery	UBERON:0002250	77.85	gold quality
tibial artery	UBERON:0007610	77.85	gold quality
nasal cavity mucosa	UBERON:0001826	77.37	gold quality
descending thoracic aorta	UBERON:0002345	77.20	gold quality
right lobe of liver	UBERON:0001114	76.91	gold quality
aorta	UBERON:0000947	76.71	gold quality
small intestine Peyer’s patch	UBERON:0003454	76.71	gold quality
oviduct epithelium	UBERON:0004804	76.63	gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 2.

Experiment	Marker?	Max mean expression
E-MTAB-9543	yes	11.22
E-ANND-3	yes	3.07

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.