GOT1-DT

Summary

GOT1-DT (GOT1 divergent transcript, HGNC:55848) is a long non-coding RNA gene on chromosome 10q24.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55848
Approved symbol	GOT1-DT
Name	GOT1 divergent transcript
Location	10q24.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224934
Ensembl biotype	lncRNA
Entrez	101927300
RNAcentral	URS00026A2289 — lncRNA, 2163 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 40 — 40 lncRNA

ENST00000416191, ENST00000641293, ENST00000647895, ENST00000652903, ENST00000657109, ENST00000659667, ENST00000662162, ENST00000668010, ENST00000669986, ENST00000689675, ENST00000691866, ENST00000692010, ENST00000693242, ENST00000701833, ENST00000845448, ENST00000845449, ENST00000845450, ENST00000845451, ENST00000845452, ENST00000845453, ENST00000845454, ENST00000845455, ENST00000845456, ENST00000845457, ENST00000845458, ENST00000845459, ENST00000845460, ENST00000845461, ENST00000845462, ENST00000845463, ENST00000845464, ENST00000845465, ENST00000845466, ENST00000845467, ENST00000845468, ENST00000845469, ENST00000845470, ENST00000845471, ENST00000845472, ENST00000845473

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000416191 — 4 exons

Exon	Start	End
ENSE00001627945	99435505	99435623
ENSE00001651686	99431191	99431265
ENSE00001669035	99433546	99433940
ENSE00001778455	99435709	99438117

Expression profiles

Bgee: expression breadth ubiquitous, 135 present calls, max score 89.07.

Top tissues by expression

137 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
quadriceps femoris	UBERON:0001377	89.07	gold quality
right hemisphere of cerebellum	UBERON:0014890	84.23	gold quality
cerebellar hemisphere	UBERON:0002245	84.13	gold quality
skeletal muscle tissue	UBERON:0001134	84.02	gold quality
cerebellar cortex	UBERON:0002129	84.00	gold quality
cerebellum	UBERON:0002037	83.78	gold quality
thymus	UBERON:0002370	83.40	silver quality
hindlimb stylopod muscle	UBERON:0004252	83.10	gold quality
gastrocnemius	UBERON:0001388	82.89	gold quality
muscle of leg	UBERON:0001383	82.30	gold quality
right uterine tube	UBERON:0001302	81.17	gold quality
muscle layer of sigmoid colon	UBERON:0035805	79.27	gold quality
muscle tissue	UBERON:0002385	78.79	gold quality
left ovary	UBERON:0002119	78.53	gold quality
lower esophagus muscularis layer	UBERON:0035833	78.33	gold quality
lower esophagus	UBERON:0013473	78.29	gold quality
right ovary	UBERON:0002118	78.15	gold quality
nucleus accumbens	UBERON:0001882	78.00	gold quality
pituitary gland	UBERON:0000007	77.81	gold quality
right lobe of thyroid gland	UBERON:0001119	77.63	gold quality
ovary	UBERON:0000992	77.61	gold quality
caudate nucleus	UBERON:0001873	77.35	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	77.24	gold quality
primary visual cortex	UBERON:0002436	77.10	gold quality
thyroid gland	UBERON:0002046	77.07	gold quality
cerebellar vermis	UBERON:0004720	77.02	gold quality
left lobe of thyroid gland	UBERON:0001120	76.87	gold quality
right frontal lobe	UBERON:0002810	76.45	gold quality
putamen	UBERON:0001874	76.40	gold quality
Brodmann (1909) area 9	UBERON:0013540	76.40	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	4.78

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.