GPA33-AS1

Summary

GPA33-AS1 (GPA33 antisense RNA 1, HGNC:58358) is a long non-coding RNA gene on chromosome 1q24.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58358
Approved symbol	GPA33-AS1
Name	GPA33 antisense RNA 1
Location	1q24.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000227907
Ensembl biotype	lncRNA
Entrez	105371600

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000417644, ENST00000762840, ENST00000762841, ENST00000762842

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000417644 — 2 exons

Exon	Start	End
ENSE00004118400	167052480	167052766
ENSE00004118404	167058307	167058556

Expression profiles

Bgee: expression breadth broad, 74 present calls, max score 85.68.

Top tissues by expression

191 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.68	gold quality
sperm	CL:0000019	83.30	silver quality
left testis	UBERON:0004533	82.54	gold quality
right testis	UBERON:0004534	81.07	gold quality
testis	UBERON:0000473	79.26	gold quality
rectum	UBERON:0001052	76.90	gold quality
parotid gland	UBERON:0001831	71.16	gold quality
epithelial cell of pancreas	CL:0000083	69.42	gold quality
transverse colon	UBERON:0001157	68.05	gold quality
mucosa of transverse colon	UBERON:0004991	67.38	gold quality
islet of Langerhans	UBERON:0000006	64.35	gold quality
pancreatic ductal cell	CL:0002079	63.05	silver quality
colonic epithelium	UBERON:0000397	62.87	silver quality
colon	UBERON:0001155	62.83	gold quality
large intestine	UBERON:0000059	62.57	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	61.67	gold quality
intestine	UBERON:0000160	61.04	gold quality
myocardium	UBERON:0002349	59.63	gold quality
lateral nuclear group of thalamus	UBERON:0002736	59.63	gold quality
biceps brachii	UBERON:0001507	59.48	gold quality
vermiform appendix	UBERON:0001154	59.44	gold quality
nasal cavity epithelium	UBERON:0005384	58.70	gold quality
vena cava	UBERON:0004087	58.68	gold quality
small intestine Peyer’s patch	UBERON:0003454	58.57	gold quality
small intestine	UBERON:0002108	57.75	gold quality
skeletal muscle tissue	UBERON:0001134	57.19	gold quality
monocyte	CL:0000576	56.69	gold quality
mucosa of sigmoid colon	UBERON:0004993	56.13	gold quality
upper arm skin	UBERON:0004263	56.12	gold quality
esophagus squamous epithelium	UBERON:0006920	56.11	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.65

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.