GPC5-AS2

Summary

GPC5-AS2 (GPC5 antisense RNA 2, HGNC:39887) is a long non-coding RNA gene on chromosome 13q31.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:39887
Approved symbol	GPC5-AS2
Name	GPC5 antisense RNA 2
Location	13q31.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000232885
Ensembl biotype	lncRNA
Entrez	100873970
RNAcentral	URS000075DAF4 — lncRNA, 415 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000417589, ENST00000656007, ENST00000810843

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000417589 — 2 exons

Exon	Start	End
ENSE00001635065	92340397	92340603
ENSE00001659567	92339794	92339987

Expression profiles

Bgee: expression breadth broad, 64 present calls, max score 81.57.

Top tissues by expression

64 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.57	silver quality
calcaneal tendon	UBERON:0003701	68.33	gold quality
small intestine	UBERON:0002108	64.75	silver quality
corpus callosum	UBERON:0002336	64.18	gold quality
kidney	UBERON:0002113	60.08	gold quality
lung	UBERON:0002048	58.13	gold quality
prefrontal cortex	UBERON:0000451	58.04	gold quality
adrenal tissue	UBERON:0018303	56.46	gold quality
adrenal gland	UBERON:0002369	55.91	gold quality
endometrium	UBERON:0001295	53.83	silver quality
stomach	UBERON:0000945	50.69	gold quality
blood	UBERON:0000178	50.51	gold quality
liver	UBERON:0002107	50.13	silver quality
adult mammalian kidney	UBERON:0000082	49.87	gold quality
monocyte	CL:0000576	48.77	silver quality
tibial artery	UBERON:0007610	48.50	gold quality
body of stomach	UBERON:0001161	48.31	gold quality
subcutaneous adipose tissue	UBERON:0002190	47.93	gold quality
heart	UBERON:0000948	47.90	gold quality
right adrenal gland cortex	UBERON:0035827	47.18	gold quality
heart left ventricle	UBERON:0002084	46.86	silver quality
tibial nerve	UBERON:0001323	46.49	gold quality
skin of abdomen	UBERON:0001416	46.10	gold quality
ascending aorta	UBERON:0001496	45.51	silver quality
zone of skin	UBERON:0000014	45.47	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	45.03	gold quality
intestine	UBERON:0000160	44.84	silver quality
adipose tissue	UBERON:0001013	44.72	gold quality
esophagus	UBERON:0001043	44.61	silver quality
skin of leg	UBERON:0001511	44.29	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.97

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.