GPR15
gene geneOn this page
Summary
GPR15 (G protein-coupled receptor 15, HGNC:4469) is a protein-coding gene on chromosome 3q11.2, encoding G-protein coupled receptor 15 (P49685). G protein-coupled receptor that plays an important role in immune homeostasis.
This gene encodes a G protein-coupled receptor that acts as a chemokine receptor for human immunodeficiency virus type 1 and 2. The encoded protein localizes to the cell membrane.
Source: NCBI Gene 2838 — RefSeq curated summary.
At a glance
- GWAS associations: 2
- Clinical variants (ClinVar): 57 total
- Druggable target: yes
- MANE Select transcript:
NM_005290
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:4469 |
| Approved symbol | GPR15 |
| Name | G protein-coupled receptor 15 |
| Location | 3q11.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000154165 |
| Ensembl biotype | protein_coding |
| OMIM | 601166 |
| Entrez | 2838 |
Gene structure
Transcript identifiers
Ensembl transcripts: 1 — 1 protein_coding
ENST00000284311
RefSeq mRNA: 1 — MANE Select: NM_005290
NM_005290
CCDS: CCDS2931
Canonical transcript exons
ENST00000284311 — 1 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001014369 | 98531978 | 98534681 |
Expression profiles
Bgee: expression breadth ubiquitous, 110 present calls, max score 92.41.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 2.7119 / max 583.4987, expressed in 121 samples.
FANTOM5 promoters (6 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 37530 | 2.1857 | 104 |
| 37529 | 0.2328 | 43 |
| 37531 | 0.1918 | 44 |
| 37533 | 0.0403 | 22 |
| 37532 | 0.0335 | 14 |
| 37528 | 0.0279 | 18 |
Top tissues by expression
266 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| rectum | UBERON:0001052 | 92.41 | gold quality |
| colonic epithelium | UBERON:0000397 | 89.27 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 77.65 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 73.87 | gold quality |
| transverse colon | UBERON:0001157 | 72.18 | gold quality |
| vermiform appendix | UBERON:0001154 | 69.55 | gold quality |
| small intestine | UBERON:0002108 | 69.37 | gold quality |
| bone marrow cell | CL:0002092 | 66.89 | gold quality |
| caecum | UBERON:0001153 | 65.60 | gold quality |
| gall bladder | UBERON:0002110 | 64.57 | gold quality |
| lymph node | UBERON:0000029 | 63.31 | gold quality |
| spleen | UBERON:0002106 | 63.21 | gold quality |
| minor salivary gland | UBERON:0001830 | 63.05 | gold quality |
| tibialis anterior | UBERON:0001385 | 62.95 | silver quality |
| granulocyte | CL:0000094 | 62.29 | gold quality |
| intestine | UBERON:0000160 | 62.09 | gold quality |
| endometrium epithelium | UBERON:0004811 | 61.09 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 60.83 | gold quality |
| tonsil | UBERON:0002372 | 60.68 | gold quality |
| esophagus mucosa | UBERON:0002469 | 60.57 | gold quality |
| saliva-secreting gland | UBERON:0001044 | 60.43 | gold quality |
| large intestine | UBERON:0000059 | 60.36 | gold quality |
| mouth mucosa | UBERON:0003729 | 60.07 | gold quality |
| colon | UBERON:0001155 | 59.96 | gold quality |
| blood | UBERON:0000178 | 59.85 | gold quality |
| frontal pole | UBERON:0002795 | 59.50 | gold quality |
| paraflocculus | UBERON:0005351 | 59.33 | gold quality |
| middle frontal gyrus | UBERON:0002702 | 59.29 | gold quality |
| mucosa of sigmoid colon | UBERON:0004993 | 58.59 | gold quality |
| ileal mucosa | UBERON:0000331 | 57.17 | silver quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-8410 | yes | 23.43 |
| E-ANND-3 | yes | 5.73 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
87 targeting GPR15, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-656-3P | 100.00 | 72.15 | 2788 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-3924 | 100.00 | 72.09 | 2394 |
| HSA-MIR-5696 | 99.98 | 72.36 | 4487 |
| HSA-MIR-3148 | 99.97 | 75.06 | 6478 |
| HSA-MIR-3688-3P | 99.97 | 72.02 | 2834 |
| HSA-MIR-607 | 99.97 | 73.62 | 5593 |
| HSA-MIR-3658 | 99.96 | 73.87 | 4379 |
| HSA-MIR-548AA | 99.96 | 70.64 | 3753 |
| HSA-MIR-548AP-3P | 99.96 | 70.64 | 3753 |
| HSA-MIR-548T-3P | 99.96 | 70.64 | 3753 |
| HSA-MIR-9718 | 99.94 | 68.91 | 918 |
| HSA-MIR-651-3P | 99.94 | 73.48 | 5177 |
| HSA-MIR-1236-3P | 99.94 | 68.04 | 1695 |
| HSA-MIR-4760-3P | 99.93 | 70.50 | 2385 |
| HSA-MIR-335-3P | 99.93 | 73.36 | 4958 |
| HSA-MIR-6835-3P | 99.93 | 70.49 | 2904 |
| HSA-MIR-6809-3P | 99.91 | 71.45 | 3814 |
| HSA-MIR-10527-5P | 99.91 | 72.28 | 3754 |
| HSA-MIR-4753-3P | 99.90 | 71.03 | 3786 |
| HSA-MIR-95-5P | 99.89 | 72.17 | 3973 |
| HSA-MIR-579-3P | 99.86 | 71.66 | 3628 |
| HSA-MIR-664B-3P | 99.84 | 71.65 | 3590 |
| HSA-MIR-6515-3P | 99.82 | 68.19 | 1933 |
| HSA-MIR-6844 | 99.82 | 70.69 | 2423 |
| HSA-MIR-623 | 99.76 | 68.16 | 1170 |
| HSA-MIR-92A-2-5P | 99.75 | 67.01 | 2164 |
Literature-anchored findings (GeneRIF, showing 24)
- role of GPR15-HIV1 gp120 interactions in gp120 binding to intestinal epithelial cells and gp120-induced cytopathic effects (PMID:12566994)
- HIV-2 isolates from aviremic and viremic individuals commonly use as coreceptors CCR5, GPR15, and CXCR6 (PMID:15650194)
- 14-3-3 proteins play multiple roles in biogenesis and trafficking of an HIV co-receptor GPR15 to control its cell surface density in response to the phosphorylation signal (PMID:21189250)
- C-terminal membrane-proximal basic residues have a role in cell surface trafficking of HIV coreceptor GPR15 protein (PMID:23430259)
- GPR15 expression was minimal in lymphocytes from the blood and the small intestine; however, it was expressed at high levels in lymphocytes from the large intestine (PMID:23661644)
- infection-induced up-regulation of GPR15 expression through TLR3 could increase susceptibility of CD4(+) T cells to HIV infection and target cell availability in the gut in some infected individuals (PMID:24558379)
- Data indicate that orphan receptor GPR15/BOB is expressed by macrophages in synovial tissue and on monocytes and neutrophils in peripheral blood, and expression is up-regulated in arthritis (RA)patients (PMID:24725539)
- Analysis of GPR15 methylation identified significantly greater hypomethylation in smokers compared with that in never-smokers. (PMID:26348578)
- we for the first time demonstrated that TM binds to GPR15 via its EGF-like domain and exerts angiogenesis and cytoprotective function in vascular ECs. (PMID:28386128)
- Results suggested that Ser-357 phosphorylation critically controls the ligand-independent endocytosis of GPR15. The functional role of Ser-357 in endocytosis was distinct from that of a conserved Ser/Thr cluster in the more proximal C-terminus, which was responsible for the beta-arrestin- and GPCR kinase-dependent endocytosis of GPR15. (PMID:28615320)
- In the peripheral blood, tobacco smoking is, to date, the only specific condition leading to an increase in GPR15+ T cells. (PMID:30387691)
- While the chronic smoking-induced enrichment of GPR15+ T cells in blood might indicate a systemic inflammation, by the widespread presence in different T cell subtypes, GPR15 could feature a general impact on maintaining the systemic homeostasis to putatively prevent harm from smoking. (PMID:30387691)
- Cigarette and Cannabis Smoking Effects on GPR15+ Helper T Cell Levels in Peripheral Blood: Relationships with Epigenetic Biomarkers. (PMID:32019074)
- Ahr-Foxp3-RORgammat axis controls gut homing of CD4(+) T cells by regulating GPR15. (PMID:32532834)
- Inflammatory biomarker relationships with helper T cell GPR15 expression and cannabis and tobacco smoking. (PMID:33310155)
- Natural cystatin C fragments inhibit GPR15-mediated HIV and SIV infection without interfering with GPR15L signaling. (PMID:33431697)
- The aryl hydrocarbon receptor regulates expression of mucosal trafficking receptor GPR15. (PMID:33674764)
- GPR15 Facilitates Recruitment of Regulatory T Cells to Promote Colorectal Cancer. (PMID:33727229)
- Clonally expanded, GPR15-expressing pathogenic effector TH2 cells are associated with eosinophilic esophagitis. (PMID:34389613)
- GPR15 expressed in T lymphocytes from RA patients is involved in leukocyte chemotaxis to the synovium. (PMID:36164808)
- Elevated Expression and Activation of GPR15 in Immune Cells in Graves’ Disease. (PMID:36551327)
- Emerging roles of a chemoattractant receptor GPR15 and ligands in pathophysiology. (PMID:37457732)
- Blocking GPR15 Counteracts Integrin-dependent T Cell Gut Homing in Vivo. (PMID:38243565)
- Thrombin receptor activating peptide-6 decreases acute graft-versus-host disease through activating GPR15. (PMID:38459169)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Gpr15 | ENSMUSG00000047293 |
| rattus_norvegicus | Gpr15 | ENSRNOG00000039680 |
Paralogs (7): BDKRB1 (ENSG00000100739), APLNR (ENSG00000134817), AGTR1 (ENSG00000144891), BDKRB2 (ENSG00000168398), GPR25 (ENSG00000170128), RXFP4 (ENSG00000173080), AGTR2 (ENSG00000180772)
Protein
Protein identifiers
G-protein coupled receptor 15 — P49685 (reviewed: P49685)
Alternative names: Brother of Bonzo
All UniProt accessions (2): P49685, B6V9G9
UniProt curated annotations — full annotation on UniProt →
Function. G protein-coupled receptor that plays an important role in immune homeostasis. Acts via its natural ligand GPR15LG, a chemokine-like polypeptide strongly expressed in gastrointestinal tissues. GPR15-GPR15LG signaling axis regulates intestinal homeostasis and inflammation through the migration of immune cells. Controls thereby the specific homing of T-cells, particularly FOXP3+ regulatory T-cells (Tregs), to the large intestine lamina propria. Also required for skin localization of thymus-derived dendritic epidermal T-cells. Plays an important role in mediating cytoprotective function as well as angiogenesis of thrombomodulin. Mechanistically, preferentially signals through the Gi/o pathway to inhibit adenylate cyclase activity and activate a phosphatidylinositol-calcium second messenger system that regulates the release of Ca(2+) ions from intracellular stores. (Microbial infection) Acts as an alternative coreceptor with CD4 for HIV-1 infection.
Subunit / interactions. Interacts with adapter YWHAE; this interaction promotes ER-to-Golgi transport of GPR15. Interacts with GNAI1; this interaction initiates the signaling pathway.
Subcellular location. Cell membrane.
Tissue specificity. Highly expressed in lymphoid tissues, including macrophages and peripheral blood mononuclear cells.
Post-translational modifications. Phosphorylation is necessary for YWHAE binding and efficient surface expression. O-glycosylated. Sialylated O-glycans in the N-terminal tail inhibits binding of GPR15LG. Sulfation is required for efficient binding of GPR15LG.
Similarity. Belongs to the G-protein coupled receptor 1 family.
RefSeq proteins (1): NP_005281* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000276 | GPCR_Rhodpsn | Family |
| IPR017452 | GPCR_Rhodpsn_7TM | Domain |
| IPR050119 | CCR1-9-like | Family |
Pfam: PF00001
UniProt features (40 total): helix 12, topological domain 8, transmembrane region 7, mutagenesis site 4, strand 3, sequence variant 2, turn 2, chain 1, modified residue 1
Structure
Experimental structures (PDB)
2 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 8ZQE | ELECTRON MICROSCOPY | 2.9 |
| 9WXM | ELECTRON MICROSCOPY | 3.3 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P49685-F1 | 81.62 | 0.50 |
Antibody-complex structures (SAbDab): 2 — 8ZQE, 9WXM
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (1): 359
Mutagenesis-validated functional residues (4):
| Position | Phenotype |
|---|---|
| 40 | complete loss of ligand-induced receptor activation. |
| 261 | complete loss of ligand-induced receptor activation. |
| 356 | abolished ywhae binding. |
| 359 | abolished ywhae binding and substantially reduced cell surface expression. |
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-418555 | G alpha (s) signalling events |
MSigDB gene sets: 172 (showing top):
MORF_MSH3, MORF_BRCA1, MORF_ATRX, RACCACAR_AML_Q6, MORF_RAD51L3, GOBP_LEUKOCYTE_MIGRATION, MORF_CTSB, MORF_IL4, GOBP_BLOOD_VESSEL_MORPHOGENESIS, GOBP_BIOLOGICAL_PROCESS_INVOLVED_IN_INTERACTION_WITH_HOST, GOBP_VIRAL_LIFE_CYCLE, GOBP_T_CELL_MIGRATION, GOBP_LYMPHOCYTE_MIGRATION, MORF_ATF2, SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_DN
GO Biological Process (7): angiogenesis (GO:0001525), G protein-coupled receptor signaling pathway (GO:0007186), symbiont entry into host cell (GO:0046718), T cell migration (GO:0072678), signal transduction (GO:0007165), adenylate cyclase-activating G protein-coupled receptor signaling pathway (GO:0007189), adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (GO:0007193)
GO Molecular Function (4): virus receptor activity (GO:0001618), G protein-coupled receptor activity (GO:0004930), coreceptor activity (GO:0015026), protein binding (GO:0005515)
GO Cellular Component (4): cytoplasm (GO:0005737), endosome (GO:0005768), plasma membrane (GO:0005886), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| GPCR downstream signalling | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| adenylate cyclase-modulating G protein-coupled receptor signaling pathway | 2 |
| cellular anatomical structure | 2 |
| blood vessel morphogenesis | 1 |
| anatomical structure formation involved in morphogenesis | 1 |
| G protein-coupled receptor activity | 1 |
| signal transduction | 1 |
| viral life cycle | 1 |
| symbiont entry into host | 1 |
| lymphocyte migration | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| adenylate cyclase activator activity | 1 |
| adenylate cyclase inhibitor activity | 1 |
| symbiont entry into host cell | 1 |
| exogenous protein binding | 1 |
| transmembrane signaling receptor activity | 1 |
| G protein-coupled receptor signaling pathway | 1 |
| signaling receptor activity | 1 |
| binding | 1 |
| intracellular anatomical structure | 1 |
| endomembrane system | 1 |
| cytoplasmic vesicle | 1 |
| membrane | 1 |
| cell periphery | 1 |
Protein interactions and networks
STRING
670 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| GPR15 | GPR15LG | Q6UWK7 | 776 |
| GPR15 | ITIH4 | Q14624 | 638 |
| GPR15 | ZNF80 | P51504 | 600 |
| GPR15 | CLDND1 | Q9NY35 | 574 |
| GPR15 | LRRN3 | Q9H3W5 | 571 |
| GPR15 | D6RE68 | D6RE68 | 507 |
| GPR15 | CD4 | P01730 | 480 |
| GPR15 | AHRR | A9YTQ3 | 480 |
| GPR15 | PAX5 | Q02548 | 475 |
| GPR15 | TNFRSF8 | P28908 | 470 |
| GPR15 | GNG7 | O60262 | 445 |
| GPR15 | TAS2R9 | Q9NYW1 | 444 |
| GPR15 | AGT | P01019 | 442 |
| GPR15 | ZNF266 | Q14584 | 442 |
| GPR15 | CCDC163 | A0A0D9SF12 | 438 |
IntAct
0 interactions, top by confidence:
BioGRID (2): GPR15 (Reconstituted Complex), YWHAB (Affinity Capture-Western)
ESM2 similar proteins: A0A0R4IM31, A0A0R4IP11, E9QJ73, F8VQN3, O00270, O00421, O15218, O35457, O97663, P31392, P32302, P34997, P43142, P49685, Q04683, Q0II78, Q0VDU3, Q149R9, Q16570, Q3ZC80, Q67ES2, Q6XKD3, Q75ZH0, Q7TMA4, Q7TQA9, Q7TQP4, Q7TSN5, Q7TSN6, Q863H8, Q8BZR0, Q8TDV2, Q95LF2, Q95LF3, Q95LF4, Q95LF5, Q95LF7, Q95LF9, Q95LG5, Q96CH1, Q96G91
Diamond homologs: A0A4W3GG95, A5PLE7, A7YY44, D4A7K7, E7F7V7, E9QJ73, F1MV99, O00254, O08565, O08858, O18982, O42179, O54689, O88410, O97571, O97663, O97666, P21109, P25024, P25025, P25116, P25930, P26824, P30558, P30937, P30938, P31391, P32249, P32250, P32302, P34996, P34997, P35344, P35346, P35407, P35414, P43657, P47749, P49652, P49682
SIGNOR signaling
1 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| hsa-miR-1225-5p | “down-regulates quantity by repression” | GPR15 | “post transcriptional regulation” |
Disease & clinical
Clinical variants and AI predictions
ClinVar
57 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 51 |
| Likely benign | 4 |
| Benign | 2 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
160 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 3:98532144:A:AG | acceptor_gain | 0.8000 |
| 3:98532145:G:GG | acceptor_gain | 0.8000 |
| 3:98532549:G:GT | donor_gain | 0.6600 |
| 3:98532141:TCCAG:T | acceptor_gain | 0.6300 |
| 3:98532142:CCAG:C | acceptor_gain | 0.6200 |
| 3:98532659:T:A | acceptor_gain | 0.6200 |
| 3:98532143:CAG:C | acceptor_gain | 0.6000 |
| 3:98532596:C:T | donor_gain | 0.5800 |
| 3:98532660:G:GC | acceptor_gain | 0.5800 |
| 3:98532569:A:G | donor_gain | 0.5500 |
| 3:98532723:A:T | donor_gain | 0.5500 |
| 3:98532877:C:G | donor_gain | 0.5400 |
| 3:98532140:TTCCA:T | acceptor_gain | 0.5300 |
| 3:98532693:G:GT | donor_gain | 0.5300 |
| 3:98532844:C:T | donor_gain | 0.5300 |
| 3:98532145:GT:G | acceptor_gain | 0.5200 |
| 3:98532145:G:T | acceptor_gain | 0.5100 |
| 3:98531995:G:GG | donor_gain | 0.5000 |
| 3:98532144:A:T | acceptor_gain | 0.5000 |
| 3:98532656:TGTTG:T | acceptor_gain | 0.5000 |
| 3:98532658:TTG:T | acceptor_gain | 0.5000 |
| 3:98532656:T:TA | acceptor_gain | 0.4900 |
| 3:98532145:GTCT:G | acceptor_gain | 0.4800 |
| 3:98532886:GAG:G | donor_gain | 0.4800 |
| 3:98532145:GTC:G | acceptor_gain | 0.4700 |
| 3:98532876:GCTTG:G | donor_gain | 0.4700 |
| 3:98532885:GGAG:G | donor_gain | 0.4700 |
| 3:98532886:GAGG:G | donor_gain | 0.4700 |
| 3:98532886:GAGGT:G | donor_loss | 0.4700 |
| 3:98532889:G:GG | donor_gain | 0.4700 |
AlphaMissense
2360 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 3:98532781:T:C | F250L | 0.997 |
| 3:98532783:T:A | F250L | 0.997 |
| 3:98532783:T:G | F250L | 0.997 |
| 3:98532330:G:C | W99C | 0.996 |
| 3:98532330:G:T | W99C | 0.996 |
| 3:98532415:A:C | S128R | 0.996 |
| 3:98532417:T:A | S128R | 0.996 |
| 3:98532417:T:G | S128R | 0.996 |
| 3:98532349:T:A | C106S | 0.995 |
| 3:98532350:G:C | C106S | 0.995 |
| 3:98532328:T:A | W99R | 0.993 |
| 3:98532328:T:C | W99R | 0.993 |
| 3:98532580:T:A | C183S | 0.993 |
| 3:98532581:G:C | C183S | 0.993 |
| 3:98532358:A:C | S109R | 0.992 |
| 3:98532360:C:A | S109R | 0.992 |
| 3:98532360:C:G | S109R | 0.992 |
| 3:98532173:G:A | G47E | 0.991 |
| 3:98532270:C:A | D79E | 0.991 |
| 3:98532270:C:G | D79E | 0.991 |
| 3:98532916:A:C | S295R | 0.991 |
| 3:98532918:C:A | S295R | 0.991 |
| 3:98532918:C:G | S295R | 0.991 |
| 3:98532172:G:A | G47R | 0.990 |
| 3:98532172:G:C | G47R | 0.990 |
| 3:98532269:A:C | D79A | 0.990 |
| 3:98532350:G:A | C106Y | 0.990 |
| 3:98532505:T:A | W158R | 0.989 |
| 3:98532505:T:C | W158R | 0.989 |
| 3:98532269:A:T | D79V | 0.988 |
dbSNP variants (sampled 300 via entrez): RS1000219729 (3:98533436 G>C), RS1000335404 (3:98533156 G>A,C,T), RS1001282150 (3:98532857 T>C,G), RS1001834914 (3:98531057 T>C), RS1003566456 (3:98530132 G>A), RS1005645950 (3:98530792 G>A), RS1006451897 (3:98531026 G>A), RS1007092099 (3:98531738 A>G), RS1007146104 (3:98530566 G>A,C), RS1007429161 (3:98530269 C>A,T), RS1008255085 (3:98534992 A>C,G), RS1008383165 (3:98534946 G>A), RS1009008191 (3:98533533 T>C), RS1009646353 (3:98533522 G>C), RS1009775502 (3:98533754 T>C)
Disease associations
OMIM: gene MIM:601166 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
2 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST009532_16 | Circulating leptin levels in high cardiovascular risk | 3.000000e-06 |
| GCST009532_3 | Circulating leptin levels in high cardiovascular risk | 6.000000e-06 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0005000 | leptin measurement |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL4523866 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: gpcr — Class A Orphans with emerging pharmacology
Most potent curated ligand interactions (2 total), top 2:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| GPR15L (71-81) | Agonist | 6.84 | pEC50 |
| GPR15L | Agonist | 5.85 | pEC50 |
ChEMBL bioactivities
2 potent at pChembl≥5 of 2 total, top 2 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 6.01 | EC50 | 980 | nM | CHEMBL5085657 |
| 5.75 | EC50 | 1770 | nM | CHEMBL5085657 |
CTD chemical–gene interactions
8 total (human), top 8 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | increases expression, increases methylation | 2 |
| aristolochic acid I | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| monomethylpropion | increases expression | 1 |
| Arsenic Trioxide | increases expression | 1 |
| Diuron | decreases expression | 1 |
| Tobacco Smoke Pollution | decreases methylation | 1 |
| Valproic Acid | decreases methylation | 1 |
ChEMBL screening assays
5 unique, capped per target: 4 binding, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4883418 | Binding | PRESTO-Tango GPCRome screening (GPR15) | Data for DCP probe UCSF924 |
| CHEMBL5665248 | Functional | Agonist activity at GPR15 receptor (unknown origin) | In silico design of novel probes for the atypical opioid receptor MRGPRX2. — Nat Chem Biol |
Cellosaurus cell lines
3 cell lines: 1 cancer cell line, 1 transformed cell line, 1 spontaneously immortalized cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_1E05 | GHOST(3).BOB/GPR15 | Cancer cell line | Female |
| CVCL_1E12 | 3T3.T4.BOB | Transformed cell line | Male |
| CVCL_KX39 | PathHunter CHO-K1 GPR15 beta-arrestin | Spontaneously immortalized cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.