GPR17
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Summary
GPR17 (G protein-coupled receptor 17, HGNC:4471) is a protein-coding gene on chromosome 2q14.3, encoding Uracil nucleotide/cysteinyl leukotriene receptor (Q13304). Dual specificity receptor for uracil nucleotides and cysteinyl leukotrienes (CysLTs).
Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within negative regulation of inflammatory response to antigenic stimulus. Predicted to be located in membrane. Predicted to be active in plasma membrane.
Source: NCBI Gene 2840 — automated summary from GO annotations (Alliance of Genome Resources).
At a glance
- GWAS associations: 1
- Clinical variants (ClinVar): 72 total
- GTEx eGene: eQTL in 38 tissues, sQTL in 7 (q < 0.05)
- ChEMBL bioactivity: 5 clinical-phase molecules tested; no curated mechanism-of-action drug
- Constraint (gnomAD): pLI 0.01 (LoF-tolerant), LOEUF 1.89 (unconstrained)
- MANE Select transcript:
NM_001161417 - Notable: 72 clinical variants but no curated precision-oncology (CIViC) evidence yet
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:4471 |
| Approved symbol | GPR17 |
| Name | G protein-coupled receptor 17 |
| Location | 2q14.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000144230 |
| Ensembl biotype | protein_coding |
| OMIM | 603071 |
| Entrez | 2840 |
Gene structure
Transcript identifiers
Ensembl transcripts: 8 — 7 protein_coding, 1 protein_coding_CDS_not_defined
MANE Select: ENST00000486700
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 3, TSL 3: 1, TSL 4: 1, TSL 5: 1
ENST00000486700, ENST00000272644, ENST00000393018, ENST00000423019, ENST00000496086, ENST00000544369, ENST00000957151, ENST00001143314
RefSeq mRNA: 4 — MANE Select: NM_001161417
NM_001161415, NM_001161416, NM_001161417, NM_005291
CCDS: CCDS2148, CCDS92862
Canonical transcript exons
ENST00000486700 — 2 exons
| Exon | Start | End |
|---|---|---|
| ENSE00003694249 | 127650716 | 127652639 |
| ENSE00003921171 | 127646153 | 127646244 |
Expression profiles
Bgee: expression breadth ubiquitous, 182 present calls, max score 93.60.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 2.6557 / max 524.3901, expressed in 153 samples.
Highest expression (Bgee): apex of heart, sural nerve, mucosa of stomach, muscle layer of sigmoid colon, amygdala.
Genetic regulation across tissues (GTEx eQTL / sQTL)
GPR17 is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 38 tissues and its splicing (sQTL) in 7 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
showing 20 of 45 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Thyroid | eqtl | 6.7e-93 | +1.75 | 2:127648067:C:T |
| Artery Tibial | eqtl | 6.3e-88 | +1.94 | 2:127648067:C:T |
| Nerve Tibial | eqtl | 2.5e-84 | +1.44 | 2:127648067:C:T |
| Muscle Skeletal | eqtl | 5.3e-84 | +1.61 | 2:127648067:C:T |
| Esophagus Mucosa | eqtl | 6.3e-83 | +1.56 | 2:127648067:C:T |
| Colon Transverse | eqtl | 3.4e-79 | +1.22 | 2:127648067:C:T |
| Adipose Visceral Omentum | eqtl | 3.6e-77 | +1.74 | 2:127648067:C:T |
| Adipose Subcutaneous | eqtl | 3.3e-75 | +1.56 | 2:127648067:C:T |
| Esophagus Muscularis | eqtl | 4.2e-75 | +1.78 | 2:127648067:C:T |
| Lung | eqtl | 1.4e-73 | +1.68 | 2:127648067:C:T |
| Colon Sigmoid | eqtl | 2.6e-70 | +1.73 | 2:127648067:C:T |
| Breast Mammary Tissue | eqtl | 1.5e-62 | +1.66 | 2:127648067:C:T |
| Heart Left Ventricle | eqtl | 2.2e-59 | +1.57 | 2:127648067:C:T |
| Skin Sun Exposed Lower leg | eqtl | 1.2e-57 | +1.19 | 2:127648067:C:T |
| Skin Not Sun Exposed Suprapubic | eqtl | 2.0e-56 | +1.35 | 2:127648067:C:T |
| Heart Atrial Appendage | eqtl | 4.7e-56 | +1.68 | 2:127648067:C:T |
| Esophagus Gastroesophageal Junction | eqtl | 2.0e-54 | +1.92 | 2:127648067:C:T |
| Stomach | eqtl | 7.3e-46 | +1.24 | 2:127648067:C:T |
| Artery Aorta | eqtl | 5.4e-45 | +1.76 | 2:127648067:C:T |
| Testis | eqtl | 6.0e-38 | +1.55 | 2:127648067:C:T |
FANTOM5 promoters
7 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 22447 | 1.6199 | 93 |
| 22445 | 0.4593 | 99 |
| 22443 | 0.3210 | 105 |
| 22446 | 0.1012 | 68 |
| 22444 | 0.0606 | 38 |
| 22448 | 0.0585 | 18 |
| 202380 | 0.0352 | 20 |
Top tissues by expression
showing 100 of 293 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| apex of heart | UBERON:0002098 | 93.60 | gold quality |
| sural nerve | UBERON:0015488 | 92.14 | gold quality |
| mucosa of stomach | UBERON:0001199 | 90.26 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 89.52 | gold quality |
| amygdala | UBERON:0001876 | 87.69 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 87.31 | gold quality |
| lower esophagus | UBERON:0013473 | 87.27 | gold quality |
| tibial nerve | UBERON:0001323 | 87.11 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 86.72 | gold quality |
| right atrium auricular region | UBERON:0006631 | 86.47 | gold quality |
| body of uterus | UBERON:0009853 | 86.31 | gold quality |
| left coronary artery | UBERON:0001626 | 86.24 | gold quality |
| heart left ventricle | UBERON:0002084 | 85.18 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 85.09 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 85.03 | gold quality |
| thoracic aorta | UBERON:0001515 | 84.75 | gold quality |
| ascending aorta | UBERON:0001496 | 84.47 | gold quality |
| aorta | UBERON:0000947 | 84.04 | gold quality |
| popliteal artery | UBERON:0002250 | 83.94 | gold quality |
| tibial artery | UBERON:0007610 | 83.88 | gold quality |
| cardiac ventricle | UBERON:0002082 | 83.72 | gold quality |
| right lung | UBERON:0002167 | 83.57 | gold quality |
| cardiac atrium | UBERON:0002081 | 83.30 | gold quality |
| coronary artery | UBERON:0001621 | 83.12 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 83.05 | gold quality |
| left uterine tube | UBERON:0001303 | 82.93 | gold quality |
| temporal lobe | UBERON:0001871 | 82.49 | gold quality |
| caudate nucleus | UBERON:0001873 | 82.38 | gold quality |
| spinal cord | UBERON:0002240 | 82.14 | gold quality |
| inferior vagus X ganglion | UBERON:0005363 | 81.51 | gold quality |
| Ammon’s horn | UBERON:0001954 | 81.49 | gold quality |
| nucleus accumbens | UBERON:0001882 | 81.46 | gold quality |
| heart | UBERON:0000948 | 81.44 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 81.28 | gold quality |
| hypothalamus | UBERON:0001898 | 81.03 | gold quality |
| cingulate cortex | UBERON:0003027 | 80.98 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 80.82 | gold quality |
| prefrontal cortex | UBERON:0000451 | 80.69 | gold quality |
| right frontal lobe | UBERON:0002810 | 80.51 | gold quality |
| sigmoid colon | UBERON:0001159 | 80.45 | gold quality |
| colonic epithelium | UBERON:0000397 | 80.32 | gold quality |
| omental fat pad | UBERON:0010414 | 80.32 | gold quality |
| peritoneum | UBERON:0002358 | 80.21 | gold quality |
| putamen | UBERON:0001874 | 79.44 | gold quality |
| telencephalon | UBERON:0001893 | 78.44 | gold quality |
| metanephros cortex | UBERON:0010533 | 78.29 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 78.15 | gold quality |
| upper lobe of lung | UBERON:0008948 | 78.12 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 78.09 | gold quality |
| substantia nigra | UBERON:0002038 | 78.06 | gold quality |
| right coronary artery | UBERON:0001625 | 78.05 | gold quality |
| frontal cortex | UBERON:0001870 | 77.93 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 77.87 | gold quality |
| gastrocnemius | UBERON:0001388 | 77.69 | gold quality |
| neocortex | UBERON:0001950 | 77.67 | gold quality |
| cerebral cortex | UBERON:0000956 | 77.60 | gold quality |
| esophagus | UBERON:0001043 | 77.60 | gold quality |
| transverse colon | UBERON:0001157 | 77.50 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 77.34 | gold quality |
| midbrain | UBERON:0001891 | 77.03 | gold quality |
| entorhinal cortex | UBERON:0002728 | 77.02 | gold quality |
| muscle of leg | UBERON:0001383 | 76.94 | gold quality |
| primary visual cortex | UBERON:0002436 | 76.83 | gold quality |
| forebrain | UBERON:0001890 | 76.71 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 76.54 | gold quality |
| spleen | UBERON:0002106 | 76.36 | gold quality |
| central nervous system | UBERON:0001017 | 75.23 | gold quality |
| body of stomach | UBERON:0001161 | 75.07 | gold quality |
| colon | UBERON:0001155 | 75.04 | gold quality |
| brain | UBERON:0000955 | 75.02 | gold quality |
| corpus callosum | UBERON:0002336 | 74.96 | gold quality |
| endocervix | UBERON:0000458 | 74.80 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 74.48 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 73.98 | gold quality |
| large intestine | UBERON:0000059 | 73.82 | gold quality |
| ectocervix | UBERON:0012249 | 73.62 | gold quality |
| occipital lobe | UBERON:0002021 | 72.90 | gold quality |
| intestine | UBERON:0000160 | 72.75 | gold quality |
| skin of leg | UBERON:0001511 | 71.98 | gold quality |
| thyroid gland | UBERON:0002046 | 71.97 | gold quality |
| stomach | UBERON:0000945 | 71.96 | gold quality |
| small intestine | UBERON:0002108 | 71.36 | gold quality |
| right lobe of liver | UBERON:0001114 | 71.07 | gold quality |
| Brodmann (1909) area 46 | UBERON:0006483 | 71.00 | silver quality |
| ventral tegmental area | UBERON:0002691 | 70.95 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 70.92 | gold quality |
| vagina | UBERON:0000996 | 70.81 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 70.71 | gold quality |
| cranial nerve II | UBERON:0000941 | 70.38 | gold quality |
| adipose tissue | UBERON:0001013 | 70.00 | gold quality |
| skin of abdomen | UBERON:0001416 | 69.96 | gold quality |
| endothelial cell | CL:0000115 | 69.93 | gold quality |
| esophagus mucosa | UBERON:0002469 | 69.80 | gold quality |
| skeletal muscle organ | UBERON:0014892 | 69.62 | gold quality |
| muscle organ | UBERON:0001630 | 69.61 | gold quality |
| minor salivary gland | UBERON:0001830 | 69.53 | gold quality |
| Brodmann (1909) area 23 | UBERON:0013554 | 69.34 | silver quality |
| middle temporal gyrus | UBERON:0002771 | 69.16 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 68.95 | gold quality |
| gall bladder | UBERON:0002110 | 68.88 | gold quality |
Single-cell (SCXA)
Detected in 5 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-35 | yes | 2014.90 |
| E-GEOD-84465 | yes | 24.53 |
| E-ENAD-17 | no | 359.21 |
| E-HCAD-30 | no | 344.13 |
| E-ANND-3 | no | 1.63 |
HPA expression
RNA tissue specificity: Tissue enriched
showing 60 of 73 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM | Protein (IHC) |
|---|---|---|---|
| Caudate putamen | tissue | 39.1 | |
| Hippocampus | tissue | 35.7 | medium |
| Corpus callosum | tissue | 35.1 | |
| Nucleus accumbens | tissue | 31.8 | |
| Spinal cord | tissue | 31.8 | |
| Substantia nigra | tissue | 31.0 | |
| Frontal cortex | tissue | 30.9 | |
| Midbrain | tissue | 30.0 | |
| Thalamus | tissue | 29.9 | |
| Medulla oblongata | tissue | 29.4 | |
| Amygdala | tissue | 27.5 | |
| Hypothalamus | tissue | 25.1 | |
| Locus coeruleus | tissue | 25.1 | |
| Ventral forebrain | tissue | 24.7 | |
| Periaqueductal gray | tissue | 24.1 | |
| Pons | tissue | 23.8 | |
| Hippocampal formation | tissue | 23.5 | |
| Putamen | tissue | 23.2 | |
| Superior colliculi | tissue | 22.7 | |
| Septum | tissue | 21.5 | |
| Olfactory bulb | tissue | 18.9 | |
| Cerebral cortex | tissue | 18.4 | medium |
| Insular cortex | tissue | 18.4 | |
| Prefrontal cortex | tissue | 16.5 | |
| Entorhinal cortex | tissue | 16.0 | |
| Motor cortex | tissue | 15.8 | |
| Temporal cortex | tissue | 15.7 | |
| Retrosplenial cortex | tissue | 15.6 | |
| Basal ganglia | tissue | 15.1 | medium |
| Retrosplenial and cingulate cortex | tissue | 14.3 | |
| Somatosensory cortex | tissue | 12.5 | |
| Occipital cortex | tissue | 12.4 | |
| Postcentral gyrus | tissue | 10.8 | |
| Cerebellum | tissue | 10.3 | high |
| Skeletal muscle | tissue | 7.9 | not detected |
| Heart muscle | tissue | 7.0 | not detected |
| Spleen | tissue | 7.0 | low |
| Choroid plexus | tissue | 6.9 | |
| Endometrium 1 | tissue | 5.1 | not detected |
| Lung | tissue | 4.6 | not detected |
| Skin 1 | tissue | 3.5 | not detected |
| Appendix | tissue | 3.4 | not detected |
| Esophagus | tissue | 2.4 | not detected |
| Pancreas | tissue | 2.3 | not detected |
| Gallbladder | tissue | 2.3 | not detected |
| Vagina | tissue | 1.9 | not detected |
| Adipose tissue | tissue | 1.9 | not detected |
| Duodenum | tissue | 1.7 | not detected |
| Epididymis | tissue | 1.4 | not detected |
| Small intestine | tissue | 1.3 | not detected |
| Lymph node | tissue | 1.2 | low |
| Placenta | tissue | 1.2 | not detected |
| Thyroid gland | tissue | 1.0 | not detected |
| Adrenal gland | tissue | 1.0 | not detected |
| Salivary gland | tissue | 0.9 | not detected |
| Prostate | tissue | 0.9 | not detected |
| Urinary bladder | tissue | 0.8 | not detected |
| Testis | tissue | 0.7 | not detected |
| Colon | tissue | 0.7 | not detected |
| Stomach 1 | tissue | 0.6 | not detected |
Brain sub-regions (HPA Brain Atlas): detected in 189; highest nTPM — Corticomedial amygdala (47.9), Basal amygdala (43.8), Cerebellar white matter (43.8), Ventral medullary reticular nucleus (42.8), Lateral amygdala (41.7).
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
Targeting GPR17 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).
showing 30 of 71 miRNAs:
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-518D-5P | 100.00 | 67.51 | 979 |
| HSA-MIR-518E-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-518F-5P | 100.00 | 67.51 | 979 |
| HSA-MIR-519A-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-519B-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-519C-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-520C-5P | 100.00 | 67.51 | 979 |
| HSA-MIR-522-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-523-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-526A-5P | 100.00 | 67.51 | 979 |
| HSA-MIR-520G-5P | 99.99 | 66.76 | 658 |
| HSA-MIR-9-3P | 99.96 | 70.88 | 2068 |
| HSA-MIR-7-1-3P | 99.91 | 71.53 | 4384 |
| HSA-MIR-7-2-3P | 99.91 | 71.40 | 4394 |
| HSA-MIR-4731-5P | 99.89 | 67.23 | 2537 |
| HSA-MIR-6780A-5P | 99.88 | 66.69 | 2776 |
| HSA-MIR-4728-5P | 99.85 | 69.39 | 4718 |
| HSA-MIR-6785-5P | 99.82 | 68.68 | 4428 |
| HSA-MIR-6515-3P | 99.82 | 68.19 | 1933 |
| HSA-MIR-1273H-5P | 99.77 | 66.32 | 2471 |
| HSA-MIR-4658 | 99.77 | 64.94 | 514 |
| HSA-MIR-6790-5P | 99.77 | 65.24 | 505 |
| HSA-MIR-6752-3P | 99.72 | 66.71 | 1587 |
| HSA-MIR-149-3P | 99.72 | 68.22 | 3963 |
| HSA-MIR-4306 | 99.72 | 70.50 | 3630 |
| HSA-MIR-30B-3P | 99.70 | 65.76 | 2325 |
| HSA-MIR-3689A-3P | 99.70 | 65.73 | 2306 |
| HSA-MIR-3689B-3P | 99.70 | 65.71 | 2311 |
| HSA-MIR-3689C | 99.70 | 65.71 | 2311 |
| HSA-MIR-6779-5P | 99.70 | 65.76 | 2363 |
Functional genomics
gnomAD constraint: pLI 0.0138, LOEUF 1.89, missense Z 0.166 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD RMC): no regional variation along ENST00000486700 — one region, missense o/e 1.00.
Literature-anchored findings (GeneRIF, showing 26)
- GPR17, a Gi-coupled orphan receptor at intermediate phylogenetic position between P2Y and CysLT receptors, is specifically activated by both families of endogenous ligands. (PMID:16990797)
- Molecular dynamics simulations suggest that GPR17 nucleotide binding pocket is similar to that described for the other P2Y receptors, although only one of the 3 basic residues that have been typically involved in ligand recognition is conserved (Arg255). (PMID:18533035)
- long-GPR17 isoform is a functional receptor that is stimulated by both uracil nucleotides and cysteinyl leukotrienes (PMID:19625605)
- We present the first isoform-specific characterization of GPR17 and show that differences exist between the isoforms in expression pattern and pharmacological profile; the two human isoforms might serve tissue-specific functions (PMID:20148890)
- REVIEW: functional properties and in vivo biology (PMID:21261596)
- A functional cross-talk exists between cysteinyl-leukotriene and purinergic sites at GPR17; the latter have a hierarchy in producing desensitizing signals. (PMID:21531793)
- analysis of agonist-induced trafficking of native GPR17 in oligodendroglial cells (PMID:23288840)
- Data validate GPR17 as a target for neurorepair (PMID:23801362)
- Nucleotides, nucleotide sugars, and cysteinyl leukotrienes do not promote activation of GPR17 in five different cell lines, nor does GPR17 have signaling properties. (PMID:23908386)
- Data indicate that small molecule MDL29,951 activates human, mouse and rat orphan G protein-coupled receptor GPR17. (PMID:24150254)
- Low levels of GRK2/GRK5 causes a slow and not complete desensitization/down-regulation of GPR17. (PMID:24613411)
- GPR17 gene disruption does not alter food intake or glucose homeostasis in mice. (PMID:25624481)
- This review summarizes knowledge about role of GPR17 receptors in physiology and pathology of nervous system, with special attention to remyelination processes. (PMID:25807830)
- Results show a crucial role of SNX27 in modulating GPR17 levels by means of a post-translational mechanism and highlights the relationship between the trafficking of the receptor through the endomembrane system and oligodendrocyte differentiation; and provide novel evidence of impairment of GPR17 expression and oligodendrocyte maturation in a mouse model of Down syndrome that is characterized by SNX27 down-regulation. (PMID:27270750)
- uracil nucleotides and cysteinyl leukotrienes do not activate human, mouse, or rat GPR17 in various cellular backgrounds. (PMID:28254957)
- In silico and ex vivo validation experiments provided the deep understanding of ligand binding with GPR17 and the present findings reported here may lead to use these two compounds as a potential activator of GPR17 for therapeutic intervention. (PMID:28827203)
- GPR17 may mediate hypoxia injury in RGC-5 cells, while the knockdown of GPR17 can reduce the hypoxia injury (PMID:30693690)
- FLIM-FRET-Based Structural Characterization of a Class-A GPCR Dimer in the Cell Membrane. (PMID:32553728)
- Transcriptomic analysis of glioblastoma multiforme providing new insights into GPR17 signaling communication. (PMID:33140689)
- Microglial vesicles improve post-stroke recovery by preventing immune cell senescence and favoring oligodendrogenesis. (PMID:33309882)
- The Distribution of GPR17-Expressing Cells Correlates with White Matter Inflammation Status in Brain Tissues of Multiple Sclerosis Patients. (PMID:33925469)
- G-protein-coupled receptor GPR17 inhibits glioma development by increasing polycomb repressive complex 1-mediated ROS production. (PMID:34120140)
- Human GPR17 missense variants identified in metabolic disease patients have distinct downstream signaling profiles. (PMID:34144038)
- GPR17 signaling activation by CHBC agonist induced cell death via modulation of MAPK pathway in glioblastoma. (PMID:35016881)
- Insulin-like Growth Factor 1 Promotes Cell Proliferation by Downregulation of G-Protein-Coupled Receptor 17 Expression via PI3K/Akt/FoxO1 Signaling in SK-N-SH Cells. (PMID:35163437)
- Structural analysis of human G-protein-coupled receptor 17 ligand binding sites. (PMID:36791278)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | gpr17 | ENSDARG00000062030 |
| mus_musculus | Gpr17 | ENSMUSG00000052229 |
| rattus_norvegicus | Gpr17 | ENSRNOG00000065480 |
| caenorhabditis_elegans | WBGENE00016570 |
Paralogs (16): P2RY10 (ENSG00000078589), GPR18 (ENSG00000125245), F2RL3 (ENSG00000127533), GPR55 (ENSG00000135898), LPAR6 (ENSG00000139679), GPR65 (ENSG00000140030), LPAR4 (ENSG00000147145), CYSLTR2 (ENSG00000152207), F2RL2 (ENSG00000164220), F2RL1 (ENSG00000164251), CYSLTR1 (ENSG00000173198), GPR4 (ENSG00000177464), GPR35 (ENSG00000178623), F2R (ENSG00000181104), P2RY8 (ENSG00000182162), GPR20 (ENSG00000204882)
Mouse-model phenotypes
Observed phenotypes of the mouse ortholog (MGI:3584514) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 11 distinct phenotype terms.
| Mouse phenotype (MP) | Records |
|---|---|
| increased neutrophil cell number | 1 |
| tremors | 1 |
| hindlimb paralysis | 1 |
| abnormal myelination | 1 |
| abnormal oligodendrocyte morphology | 1 |
| seizures | 1 |
| postnatal lethality | 1 |
| gliosis | 1 |
| increased mean platelet volume | 1 |
| increased vascular permeability | 1 |
| microgliosis | 1 |
Additional cross-species homologs
Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.
| Organism | UniProt | Identity | Method |
|---|---|---|---|
| Pan troglodytes | P60019 | 100.0% | Diamond |
| Pan paniscus | Q3SAG9 | 100.0% | Diamond |
| Gorilla gorilla gorilla | Q6XCF2 | 100.0% | Diamond |
| Gallus gallus | P34996 | 99.7% | Diamond |
| Meleagris gallopavo | P49652 | 99.7% | Diamond |
| Chlorocebus pygerythrus | Q8HZP3 | 99.7% | Diamond |
| Sus scrofa | P79291 | 99.6% | Diamond |
| Macaca mulatta | O97664 | 99.2% | Diamond |
| Macaca fascicularis | Q95LH1 | 99.2% | Diamond |
| Cricetulus griseus | P58825 | 98.8% | Diamond |
| Meriones unguiculatus | Q99PE3 | 98.8% | Diamond |
| Papio hamadryas | P56488 | 97.9% | Diamond |
| Bos taurus | P48042 | 96.8% | Diamond |
| Procambarus clarkii | P35356 | 96.7% | Diamond |
| Cavia porcellus | P59902 | 96.2% | Diamond |
| Cricetulus longicaudatus | Q00991 | 89.5% | Diamond |
| Todarodes pacificus | P31356 | 87.2% | Diamond |
| Human herpesvirus 5 strain Merlin | F5HDK1 | 96.0% | Diamond |
| Human herpesvirus 5 strain AD169 | P09703 | 94.8% | Diamond |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| WDR33 | protein-coding | 55339 |
| LIMS2 | protein-coding | 55679 |
| SFT2D3 | protein-coding | 84826 |
| MYO7B | protein-coding | 4648 |
| IWS1 | protein-coding | 55677 |
| MYO7B-AS1 | ncRNA | 101927834 |
Protein
Protein identifiers
Uracil nucleotide/cysteinyl leukotriene receptor — Q13304 (reviewed: Q13304)
Alternative names: G protein-coupled receptor 17, P2Y-like receptor, R12
All UniProt accessions (3): C9JWY5, Q13304, G4XH68
UniProt curated annotations — full annotation on UniProt →
Function. Dual specificity receptor for uracil nucleotides and cysteinyl leukotrienes (CysLTs). Signals through G(i) and inhibition of adenylyl cyclase. May mediate brain damage by nucleotides and CysLTs following ischemia.
Subcellular location. Cell membrane.
Tissue specificity. Expressed in brain, kidney, heart and umbilical vein endothelial cells. Highest level in brain.
Similarity. Belongs to the G protein-coupled receptor 1 family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q13304-1 | 1 | yes |
| Q13304-2 | 2 |
RefSeq proteins (4): NP_001154887, NP_001154888, NP_001154889, NP_005282 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000276 | GPCR_Rhodpsn | Family |
| IPR017452 | GPCR_Rhodpsn_7TM | Domain |
Pfam: PF00001
UniProt features (39 total): helix 13, topological domain 8, transmembrane region 7, glycosylation site 3, strand 2, chain 1, region of interest 1, disulfide bond 1, splice variant 1, sequence conflict 1, turn 1
Structure
Experimental structures (PDB)
1 structures by resolution:
| PDB | Title | Method | Resolution (Å) |
|---|---|---|---|
| 7Y89 | Structure of the GPR17-Gi complex | ELECTRON MICROSCOPY | 3.02 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q13304-F1 | 80.73 | 0.50 |
Antibody-complex structures (SAbDab)
1 antibodies co-crystallized with this protein: 7Y89
Human Protein Atlas
Protein class: G-protein coupled receptors, GPCRs excl olfactory receptors, Predicted membrane proteins, GPCRHMM predicted membrane proteins
Protein evidence: Evidence at protein level
Subcellular location (HPA, imaging): vesicles
Antibody reliability (HPA): IH enhanced · IF approved
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Disulfide bonds (1)
| Type | Positions |
|---|---|
| Disulfide bond | 132–209 |
Glycosylation sites (3)
| Type | Positions |
|---|---|
| N-linked (glcnac…) asparagine | 42, 204, 282 |
Function
Pathways and Gene Ontology
Reactome pathways
4 curated (TAS) of 11; 0 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
11 pathways:
| ID | Pathway | Evidence |
|---|---|---|
| R-HSA-418594 | G alpha (i) signalling events | curated |
| R-HSA-416476 | G alpha (q) signalling events | curated |
| R-HSA-391906 | Leukotriene receptors | curated |
| R-HSA-417957 | P2Y receptors | curated |
| R-HSA-373076 | Class A/1 (Rhodopsin-like receptors) | — |
| R-HSA-391903 | Eicosanoid ligand-binding receptors | — |
| R-HSA-388396 | GPCR downstream signalling | — |
| R-HSA-500792 | GPCR ligand binding | — |
| R-HSA-418038 | Nucleotide-like (purinergic) receptors | — |
| R-HSA-162582 | Signal Transduction | — |
| R-HSA-372790 | Signaling by GPCR | — |
MSigDB gene sets: 115 (showing top):
GOBP_REGULATION_OF_INFLAMMATORY_RESPONSE_TO_ANTIGENIC_STIMULUS, GOBP_INFLAMMATORY_RESPONSE, REACTOME_EICOSANOID_LIGAND_BINDING_RECEPTORS, GOBP_RESPONSE_TO_PEPTIDE, REACTOME_P2Y_RECEPTORS, GOBP_NEUROGENESIS, GGGTGGRR_PAX4_03, CAGCTG_AP4_Q5, GOBP_REGULATION_OF_IMMUNE_RESPONSE, MODULE_289, GOBP_REGULATION_OF_RESPONSE_TO_STRESS, GOBP_NEGATIVE_REGULATION_OF_DEFENSE_RESPONSE, GOBP_NEGATIVE_REGULATION_OF_INFLAMMATORY_RESPONSE, GOBP_INFLAMMATORY_RESPONSE_TO_ANTIGENIC_STIMULUS, MODULE_88
GO Biological Process (4): G protein-coupled receptor signaling pathway (GO:0007186), oligodendrocyte differentiation (GO:0048709), signal transduction (GO:0007165), chemokine-mediated signaling pathway (GO:0070098)
GO Molecular Function (4): G protein-coupled receptor activity (GO:0004930), chemokine receptor activity (GO:0004950), receptor serine/threonine kinase binding (GO:0033612), protein binding (GO:0005515)
GO Cellular Component (2): plasma membrane (GO:0005886), membrane (GO:0016020)
Reactome top-level categories
7 top-level categories:
| Category | Pathways |
|---|---|
| GPCR downstream signalling | 2 |
| Signaling by GPCR | 2 |
| Class A/1 (Rhodopsin-like receptors) | 2 |
| Eicosanoid ligand-binding receptors | 1 |
| Nucleotide-like (purinergic) receptors | 1 |
| Signal Transduction | 1 |
| GPCR ligand binding | 1 |
GO top-level categories
22 GO namespaces:
| Category | Terms |
|---|---|
| G protein-coupled receptor signaling pathway | 2 |
| G protein-coupled receptor activity | 1 |
| signal transduction | 1 |
| central nervous system development | 1 |
| glial cell differentiation | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| cytokine-mediated signaling pathway | 1 |
| cellular response to chemokine | 1 |
| transmembrane signaling receptor activity | 1 |
| G protein-coupled chemoattractant receptor activity | 1 |
| cytokine receptor activity | 1 |
| chemokine binding | 1 |
| chemokine-mediated signaling pathway | 1 |
| signaling receptor binding | 1 |
| binding | 1 |
| membrane | 1 |
| cell periphery | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
showing 15 of 900 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| GPR17 | ITGA4 | P13612 | 702 |
| GPR17 | P0DN79 | P0DN79 | 636 |
| GPR17 | MBP | P02686 | 575 |
| GPR17 | ITGAL | P20701 | 547 |
| GPR17 | OLIG1 | Q8TAK6 | 546 |
| GPR17 | OLIG2 | Q13516 | 545 |
| GPR17 | PDGFRA | P16234 | 544 |
| GPR17 | CNP | P09543 | 509 |
| GPR17 | ENPP6 | Q6UWR7 | 502 |
| GPR17 | MYRF | Q9Y2G1 | 497 |
| GPR17 | PLP1 | P04400 | 492 |
| GPR17 | BCAS1 | O75363 | 485 |
| GPR17 | GPR37 | O15354 | 463 |
| GPR17 | SOX10 | P56693 | 453 |
| GPR17 | SELL | P14151 | 451 |
IntAct
Human interaction partners of GPR17 in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
5 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| IPO8 | association | 0.530 | 1 |
| PDZK1 | direct interaction | 0.440 | 1 |
| GPR37 | physical association | 0.370 | 1 |
| C1QTNF9B | association | 0.350 | 1 |
| TMEM120B | association | 0.350 | 1 |
BioGRID (280 interactions; top human partners by supporting records): AARS2 (Affinity Capture-MS), ABCB8 (Affinity Capture-MS), ABHD17B (Affinity Capture-MS), ADCK1 (Affinity Capture-MS), ADCK4 (Affinity Capture-MS), ADRBK1 (Affinity Capture-Luminescence), ALG10 (Affinity Capture-MS), ALG8 (Affinity Capture-MS), ANAPC7 (Affinity Capture-MS), ARFGEF1 (Affinity Capture-MS), ARFGEF2 (Affinity Capture-MS), ARMC6 (Affinity Capture-MS), ARMC9 (Affinity Capture-MS), ATL2 (Affinity Capture-MS), ATL3 (Affinity Capture-MS)
SIGNOR signaling
6 signaling interactions:
| A | Effect | B | Mechanism |
|---|---|---|---|
| GPR17 | “up-regulates activity” | GNAI1 | binding |
| GPR17 | “up-regulates activity” | GNAI3 | binding |
| GPR17 | “up-regulates activity” | GNAO1 | binding |
| GPR17 | “up-regulates activity” | GNAQ | binding |
| “3-(2-Carboxyethyl)-4,6-dichloro-1H-indole-2-carboxylic acid” | “up-regulates activity” | GPR17 | “chemical activation” |
| GRK2 | “down-regulates activity” | GPR17 | phosphorylation |
Ligand–receptor pairs (CellPhoneDB) (3)
Curated ligand–receptor partners (cell-cell communication), distinct from the protein–protein interactions above.
3 ligand–receptor pairs:
| Partner | This gene’s role | Signaling class |
|---|---|---|
| ALOX5AP;ALOX5;LTC4S | receptor | Signaling by Lipoxin/Leukotriene |
| GGT1;GGT5 | receptor | Signaling by Lipoxin/Leukotriene |
| LTA4H | receptor | Signaling by Lipoxin/Leukotriene |
Disease & clinical
Genetic variants
Variant evidence for GPR17: 72 ClinVar records (0 pathogenic / likely pathogenic); 1 GWAS association.
ClinVar
72 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 56 |
| Likely benign | 10 |
| Benign | 3 |
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 24 predictions of 297):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 2:127646245–127646246 | donor_loss | 0.9900 | 4 |
| 2:127650714–127650715 | acceptor_loss | 0.9900 | 6 |
| 2:127646245 | donor_loss | 0.9300 | |
| 2:127650704 | acceptor_loss | 0.9300 | |
| 2:127648220 | donor_gain | 0.8600 | |
| 2:127648248 | donor_gain | 0.8600 | |
| 2:127648287–127648288 | donor_loss | 0.8300 | 6 |
| 2:127648286 | donor_loss | 0.8200 | 2 |
| 2:127649523 | donor_gain | 0.8100 | |
| 2:127648286 | donor_loss | 0.7900 |
AlphaMissense
727 missense substitutions predicted likely pathogenic (of 2,190 scored), across 212 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| D105 | 8 | 0.975 | 0.989 |
| D321 | 8 | 0.958 | 0.988 |
| D156 | 8 | 0.951 | 0.975 |
| N77 | 8 | 0.941 | 0.986 |
| F229 | 8 | 0.923 | 0.993 |
| F276 | 8 | 0.922 | 0.994 |
| H280 | 8 | 0.919 | 0.982 |
| F84 | 8 | 0.901 | 0.969 |
| F149 | 8 | 0.802 | 0.931 |
| C209 | 7 | 0.989 | 0.995 |
| C132 | 7 | 0.987 | 0.994 |
| W125 | 7 | 0.971 | 0.997 |
| F97 | 7 | 0.938 | 0.972 |
| F272 | 7 | 0.935 | 0.983 |
| F332 | 7 | 0.917 | 0.985 |
| W184 | 7 | 0.914 | 0.995 |
| F139 | 7 | 0.893 | 0.966 |
| F137 | 7 | 0.878 | 0.972 |
| S146 | 7 | 0.873 | 0.994 |
| F158 | 7 | 0.866 | 0.956 |
HPA cancer prognostics
RNA cancer specificity: Cancer enriched (Glioblastoma Multiforme)
Human Protein Atlas survival analysis — favorable = higher expression predicts better survival.
1 prognostic cancer types:
| Cancer | Prognostic | p-value |
|---|---|---|
| Lung Adenocarcinoma (validation) | favorable | 0.00072 |
Disease associations
OMIM: gene MIM:603071 | disease phenotypes:
GWAS associations
1 associations:
| Study | Trait | p-value |
|---|---|---|
| GCST010916_8 | Proportion of activated microglia (inferior temporal cortex) | 3e-6 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1075162 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
Phase ≥1, by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 197,911 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
5 molecules by phase:
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1097279 | CANGRELOR TETRASODIUM | 4 | 115 |
| CHEMBL6 | INDOMETHACIN | 4 | 157,305 |
| CHEMBL787 | MONTELUKAST | 4 | 26,923 |
| CHEMBL21333 | PRANLUKAST | 4 | 12,846 |
| CHEMBL44793 | GAVESTINEL | 2 | 722 |
PharmGKB: 1 entry (CPIC guideline: no)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: gpcr — Mas1, BB3/Brs3, GPR17
Most potent curated ligand interactions (19 total), top 19:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| ASN02563583 | Agonist | 9.96 | pEC50 |
| ASN04885796 | Agonist | 9.96 | pEC50 |
| ASN06917370 | Agonist | 9.57 | pEC50 |
| UDP-glucose | Agonist | 9.52 | pEC50 |
| LTE4 | Agonist | 9.51 | pEC50 |
| LTC4 | Agonist | 9.48 | pEC50 |
| ASN04450772 | Agonist | 8.93 | pEC50 |
| UDP-galactose | Agonist | 8.92 | pEC50 |
| cangrelor | Antagonist | 8.92 | pIC50 |
| UDP | Agonist | 8.8 | pEC50 |
| ASN04421891 | Agonist | 8.44 | pEC50 |
| I-116 | Antagonist | 8.39 | pIC50 |
| LTD4 | Agonist | 8.36 | pEC50 |
| PSB-18422 | Agonist | 7.55 | pEC50 |
| ATP | Agonist | 7.43 | pEC50 |
| montelukast | Antagonist | 7.21 | pIC50 |
| PSB-24040 | Antagonist | 7.08 | pKi |
| MDL 29,951 | Full agonist | 6.48 | pEC50 |
| 8-methylamino inosinic acid | Antagonist | 6.27 | pIC50 |
Binding affinities (BindingDB)
347 measured of 399 human assays (401 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| ((2R,3S,4R,5R)-5-(6-amino-2-(phenylethynyl)-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methyltriphosphate tetraammonium salt | EC50 | 0.036 nM | |
| cangrelor | IC50 | 0.7 nM | |
| ((2R,3S,4R,5R)-5-(6-(cyclopentylamino)-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methyltriphosphate tetraammonium salt | EC50 | 1.4 nM | |
| ((2R,3S,4R,5R)-5-(6-chloro-4-(methylamino)-1H-imidazo[4,5-c]pyridin-1-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methyltriphosphate tetraammonium salt | EC50 | 1.7 nM | |
| CHEBI:6993 | IC50 | 2.3 nM | |
| 6-chloro-N-[5-(3- fluoropropyl)-4,6-dimethoxy- pyrimidin-2-yl]-1H-indole-3- sulfonamide | IC50 | 7 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-7- (difluoromethylthio)-N-[5-(2- fluoroethoxy)-4,6-dimethoxy- pyrimidin-2-yl]-1H-indole-3- sulfonamide | IC50 | 7 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| CHEMBL5172549 | KD | 7.5 nM | |
| 6-chloro-N-[5-(2,2- difluoroethyl)-4,6-dimethoxy- pyrimidin-2-yl]-1H-indole-3- sulfonamide | IC50 | 8 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[5-(2,2- difluoroethyl)-4-methoxy- pyrimidin-2-yl]-7- (difluoromethylsulfanyl)-1H- indole-3-sulfonamide | IC50 | 8 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[5-(2-cyanoethyl)- 4,6-dimethoxy-pyrimidin-2- yl]-1H-indole-3-sulfonamide | IC50 | 9 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-bromo-N-[5-(2-cyanoethyl)- 4,6-dimethoxy-pyrimidin-2- yl]-7-fluoro-1H-indole-3- sulfonamide | IC50 | 9 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-bromo-N-[5-(2-cyanoethyl)- 4,6-dimethoxy-pyrimidin-2- yl]-1H-indole-3-sulfonamide | IC50 | 10 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| ((2R,3S,4R,5R)-5-(2-chloro-6-(methylamino)-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methyltriphosphate tetraammonium salt | EC50 | 11 nM | |
| 6-chloro-N-[5-(2- fluoroethoxy)-4,6-dimethoxy- pyrimidin-2-yl]-1H-indole-3- sulfonamide | IC50 | 11 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| N-[5-(2-cyanoethyl)-4,6- dimethoxy-pyrimidin-2-yl]-6- (difluoromethyl)-1H-indole-3- sulfonamide | IC50 | 11 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-bromo-N-(4,6-dimethoxy-5- methyl-pyrimidin-2-yl)-1H- pyrrolo[2,3-b]pyridine-3- sulfonamide | IC50 | 11 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[5-(3- fluoropropyl)-4-methoxy- pyrimidin-2-yl]-1H-indole-3- sulfonamide | IC50 | 12 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[5-(3,3- difluoropropyl)-4,6- dimethoxy-pyrimidin-2-yl]- 1H-indole-3-sulfonamide | IC50 | 12 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[5-(2-cyanoethyl)- 4,6-dimethoxy-pyrimidin-2- yl]-7-(difluoromethylthio)-1H- indole-3-sulfonamide | IC50 | 12 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| ((2R,3S,4R,5R)-3,4-dihydroxy-5-(5-iodo-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl)methyl trihydrogen diphosphate | EC50 | 13 nM | |
| N-(5-allyl-4,6-dimethoxy- pyrimidin-2-yl)-6-chloro-1H- indole-3-sulfonamide | IC50 | 13 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[5-(2-fluoroethyl)- 4,6-dimethoxy-pyrimidin-2- yl]-1H-indole-3-sulfonamide | IC50 | 13 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-bromo-N-[5-(2,3-difluoropropyl)-4,6-dimethoxypyrimidin-2-yl]-1H-pyrrolo[2,3-b]pyridine-3-sulfonamide | IC50 | 13 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[5-(2,2- difluoroethyl)-4-methoxy- pyrimidin-2-yl]-7-methoxy-1H- indole-3-sulfonamide | IC50 | 13 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 7-bromo-6-chloro-N-[5-(2,2-difluoroethyl)-4,6-dimethoxypyrimidin-2-yl]-1H-indole-3-sulfonamide | IC50 | 13 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-(5-cyclopropyl- 4,6-dimethoxy-pyrimidin-2- yl)-1H-indole-3-sulfonamide | IC50 | 14 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| N-[5-(2,2-difluoroethoxy)-4,6- dimethoxy-pyrimidin-2-yl]-6- (difluoromethyl)-1H-indole-3- sulfonamide | IC50 | 14 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[5-(2-cyanoethyl)- 4-methoxy-pyrimidin-2-yl]-7- (difluoromethylthio)-1H- indole-3-sulfonamide | IC50 | 14 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 7-bromo-6-chloro-N-[5-(2- fluoroethoxy)-4-methoxy- pyrimidin-2-yl]-1H-indole-3- sulfonamide | IC50 | 14 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[5-(3,3- difluoropropyl)-4-methoxy- pyrimidin-2-yl]-7-fluoro-1H- indole-3-sulfonamide | IC50 | 14 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[5-(2-cyanoethyl)- 4,6-dimethoxy-pyrimidin-2- yl]-7-fluoro-1H-indole-3- sulfonamide | IC50 | 14 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| N-[5-(2,2-difluoroethyl)-4,6- dimethoxy-pyrimidin-2-yl]-6- (difluoromethyl)-1H-indole-3- sulfonamide | IC50 | 14 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| N-[5-(2-cyanoethyl)-4,6-dimethoxypyrimidin-2-yl]-6-(difluoromethyl)-7-fluoro-1H-indole-3-sulfonamide | IC50 | 14 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[5- (cyanomethoxy)-4,6- dimethoxy-pyrimidin-2-yl]- 1H-indole-3-sulfonamide | IC50 | 14 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-bromo-N-[5-(difluoromethoxy)-4,6-dimethoxypyrimidin-2-yl]-1H-pyrrolo[2,3-b]pyridine-3-sulfonamide | IC50 | 15 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-bromo-N-[5-(3,3- difluoropropyl)-4,6- dimethoxy-pyrimidin-2-yl]- 1H-pyrrolo[2,3-b]pyridine-3- sulfonamide | IC50 | 16 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[5-(3,3- difluoropropyl)-4,6- dimethoxy-pyrimidin-2-yl]- 1H-pyrrolo[2,3-b]pyridine-3- sulfonamide | IC50 | 16 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-bromo-N-[5-(2,2- difluoroethyl)-4-methoxy- pyrimidin-2-yl]-7-methoxy-1H- indole-3-sulfonamide | IC50 | 16 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[5-(2,2- difluoroethyl)-4-methoxy- pyrimidin-2-yl]-7- (methylthio)-1H-indole-3- sulfonamide | IC50 | 16 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-bromo-N-[5- (cyanomethoxy)-4,6- dimethoxy-pyrimidin-2-yl]-7- fluoro-1H-indole-3- sulfonamide | IC50 | 16 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[5-(2,2- difluoroethoxy)-4,6- dimethoxy-pyrimidin-2-yl]- 1H-indole-3-sulfonamide | IC50 | 17 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[4,6-dimethoxy-5- (1,1,2- trifluoroethoxy)pyrimidin-2- yl]-1H-indole-3-sulfonamide | IC50 | 17 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-(4,6-dimethoxy-5- propyl-pyrimidin-2-yl)-1H- indole-3-sulfonamide | IC50 | 17 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[5-(2,2- difluoroethyl)-4,6-dimethoxy- pyrimidin-2-yl]-7-fluoro-1H- indole-3-sulfonamide | IC50 | 17 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-bromo-N-[5-(2,2- difluoroethoxy)-4,6- dimethoxy-pyrimidin-2-yl]- 1H-indole-3-sulfonamide | IC50 | 18 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[5-(3,3- difluoropropyl)-4-methoxy- pyrimidin-2-yl]-7-methoxy-1H- indole-3-sulfonamide | IC50 | 18 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6,7-dichloro-N-[5-(2,2- difluoroethyl)-4-methoxy- pyrimidin-2-yl]-1H-indole-3- sulfonamide | IC50 | 18 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-[5- (cyanomethoxy)-4,6- dimethoxy-pyrimidin-2-yl]-7- fluoro-1H-indole-3- sulfonamide | IC50 | 18 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
| 6-chloro-N-(4,6-dimethoxy-5- methyl-pyrimidin-2-yl)-1H- indole-3-sulfonamide | IC50 | 19 nM | US-20240025883: PYRIMIDIN-2-YL SULFONAMIDE DERIVATIVES |
ChEMBL bioactivities
208 potent at pChembl≥5 of 227 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 10.44 | EC50 | 0.036 | nM | CHEMBL1097652 |
| 9.15 | IC50 | 0.7 | nM | CANGRELOR TETRASODIUM |
| 8.85 | EC50 | 1.4 | nM | CHEMBL1096742 |
| 8.77 | EC50 | 1.7 | nM | CHEMBL1098419 |
| 8.20 | EC50 | 6.31 | nM | CHEMBL31344 |
| 8.14 | IC50 | 7.244 | nM | CHEMBL6103168 |
| 8.10 | IC50 | 7.943 | nM | CHEMBL6150589 |
| 8.05 | Ki | 8.913 | nM | CHEMBL6102166 |
| 7.96 | EC50 | 11 | nM | CHEMBL1098083 |
| 7.87 | EC50 | 13.49 | nM | CHEMBL3132880 |
| 7.74 | IC50 | 18.2 | nM | CHEMBL6102339 |
| 7.71 | IC50 | 19.5 | nM | CHEMBL6102166 |
| 7.69 | EC50 | 20.42 | nM | CHEMBL295718 |
| 7.55 | EC50 | 27.9 | nM | CHEMBL4216761 |
| 7.49 | EC50 | 32.1 | nM | CHEMBL4205476 |
| 7.48 | IC50 | 33.11 | nM | CHEMBL6150589 |
| 7.40 | EC50 | 39.81 | nM | CHEMBL31344 |
| 7.38 | EC50 | 41.69 | nM | CHEMBL31344 |
| 7.35 | IC50 | 45 | nM | CHEMBL6165955 |
| 7.20 | IC50 | 63.1 | nM | CHEMBL6145657 |
| 7.17 | EC50 | 67 | nM | CHEMBL4215280 |
| 7.16 | IC50 | 69 | nM | CHEMBL6142632 |
| 7.10 | IC50 | 79.43 | nM | CHEMBL6102055 |
| 7.10 | IC50 | 79.43 | nM | CHEMBL6144714 |
| 7.10 | IC50 | 79.43 | nM | CHEMBL6103168 |
| 7.10 | IC50 | 79.43 | nM | CHEMBL6102339 |
| 7.08 | Ki | 83.18 | nM | CHEMBL6150589 |
| 7.07 | IC50 | 85 | nM | CHEMBL6143347 |
| 7.05 | IC50 | 89.13 | nM | CHEMBL6103168 |
| 7.05 | Ki | 89.13 | nM | CHEMBL6102339 |
| 7.00 | IC50 | 100 | nM | CHEMBL6102740 |
| 7.00 | IC50 | 100 | nM | CHEMBL6102166 |
| 7.00 | IC50 | 100 | nM | CHEMBL6150589 |
| 7.00 | IC50 | 99 | nM | CHEMBL6165919 |
| 6.99 | EC50 | 103 | nM | CHEMBL4203088 |
| 6.95 | IC50 | 112 | nM | CHEMBL1094109 |
| 6.94 | EC50 | 115 | nM | CHEMBL4206497 |
| 6.93 | EC50 | 117 | nM | CHEMBL4209219 |
| 6.90 | IC50 | 125.9 | nM | CHEMBL6078081 |
| 6.90 | IC50 | 125.9 | nM | CHEMBL6133052 |
| 6.90 | IC50 | 125.9 | nM | CHEMBL6149147 |
| 6.90 | IC50 | 125.9 | nM | CHEMBL6147862 |
| 6.90 | IC50 | 125.9 | nM | CHEMBL6102166 |
| 6.88 | IC50 | 131.8 | nM | CHEMBL6144714 |
| 6.86 | Ki | 138 | nM | CHEMBL6145658 |
| 6.80 | IC50 | 158.5 | nM | CHEMBL6145943 |
| 6.80 | IC50 | 158.5 | nM | CHEMBL6102152 |
| 6.79 | EC50 | 162.2 | nM | CHEMBL53914 |
| 6.79 | IC50 | 162.2 | nM | CHEMBL6133618 |
| 6.73 | EC50 | 186.2 | nM | CHEMBL3921330 |
PubChem BioAssay actives
188 with measured affinity, of 389 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| [[(2R,3S,4R,5R)-5-[6-amino-2-(2-phenylethynyl)purin-9-yl]-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] phosphono hydrogen phosphate;azane | 480270: Agonist activity at human GPR17 expressed in human 1321N1 cells assessed as induction of [35S]GTPgammaS binding after 30 mins by rapid filtration assay | ec50 | <0.0001 | uM |
| tetrasodium;[dichloro(phosphonato)methyl]-[[(2R,3S,4R,5R)-3,4-dihydroxy-5-[6-(2-methylsulfanylethylamino)-2-(3,3,3-trifluoropropylsulfanyl)purin-9-yl]oxolan-2-yl]methoxy-oxidophosphoryl]oxyphosphinate | 480271: Antagonist activity at human GPR17 expressed in human 1321N1 cells assessed as inhibition of UDP-glucose-induced [35S]GTPgammaS binding after 30 mins by rapid filtration assay | ic50 | 0.0007 | uM |
| azane;[[(2R,3S,4R,5R)-5-[6-(cyclopentylamino)purin-9-yl]-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] phosphono hydrogen phosphate | 480270: Agonist activity at human GPR17 expressed in human 1321N1 cells assessed as induction of [35S]GTPgammaS binding after 30 mins by rapid filtration assay | ec50 | 0.0014 | uM |
| azane;[[(2R,3S,4R,5R)-5-[6-chloro-4-(methylamino)imidazo[4,5-c]pyridin-1-yl]-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] phosphono hydrogen phosphate | 480270: Agonist activity at human GPR17 expressed in human 1321N1 cells assessed as induction of [35S]GTPgammaS binding after 30 mins by rapid filtration assay | ec50 | 0.0017 | uM |
| 5-methoxy-2-[[5-(2-phenylphenyl)furan-2-carbonyl]amino]benzoic acid | 2207384: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced cAMP decrease preincubated for 30 mins followed by MDL29,951 addition and measured after 60 mins in presence of forskolin by fluorescence based assay | ic50 | 0.0072 | uM |
| 5-methoxy-2-[[5-[2-[3-(trifluoromethyl)phenyl]phenyl]furan-2-carbonyl]amino]benzoic acid | 2207384: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced cAMP decrease preincubated for 30 mins followed by MDL29,951 addition and measured after 60 mins in presence of forskolin by fluorescence based assay | ic50 | 0.0079 | uM |
| 5-methoxy-2-[[5-[2-(3-methoxyphenyl)phenyl]furan-2-carbonyl]amino]benzoic acid | 2207393: Displacement of [3H]PSB-12150 from human GPR17 expressed in Flp-In T-REx system generated CHO cell membrane incubated for 1 hrs by liquid scintillation counter analysis | ki | 0.0089 | uM |
| azane;[[(2R,3S,4R,5R)-5-[2-chloro-6-(methylamino)purin-9-yl]-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] phosphono hydrogen phosphate | 480270: Agonist activity at human GPR17 expressed in human 1321N1 cells assessed as induction of [35S]GTPgammaS binding after 30 mins by rapid filtration assay | ec50 | 0.0110 | uM |
| 5-methoxy-2-[[5-[2-(4-methoxyphenyl)phenyl]furan-2-carbonyl]amino]benzoic acid | 2207384: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced cAMP decrease preincubated for 30 mins followed by MDL29,951 addition and measured after 60 mins in presence of forskolin by fluorescence based assay | ic50 | 0.0182 | uM |
| 6-bromo-3-(2-carboxyethyl)-4-fluoro-1H-indole-2-carboxylic acid | 1385395: Agonist activity at human GPR17 expressed in human 1321N1 cells assessed as induction of calcium mobilization after 1 hr by Oregon Green BAPTA-1/AM dye-based fluorescence assay | ec50 | 0.0279 | uM |
| 3-(2-carboxyethyl)-4-fluoro-6-iodo-1H-indole-2-carboxylic acid | 1385395: Agonist activity at human GPR17 expressed in human 1321N1 cells assessed as induction of calcium mobilization after 1 hr by Oregon Green BAPTA-1/AM dye-based fluorescence assay | ec50 | 0.0321 | uM |
| 3-(2-carboxyethyl)-4,6-dichloro-1H-indole-2-carboxylic acid | 2207387: Agonist activity at human GPR17 expressed in HEK293 cells co-expressing Galphai2 assessed as increase in BRET ratio of RLUcII-tagged Galphai/o effector Rap1GAP-RLucII and membrane tethered rGFP-CAAX incubated for 5 mins by G protein effector membrane translocation assay | ec50 | 0.0398 | uM |
| N-[5-(2-cyanoethyl)-4,6-dimethoxypyrimidin-2-yl]-5-(3-fluoro-2-pyridinyl)-1H-pyrrole-3-sulfonamide | 2236111: Antagonist activity at untagged human GPR17S stably expressed in CHO-K1 cells assessed as inhibition of MDL29,951/IBMX-induced cAMP reduction preincubated for 5 mins followed by forskolin addition and measured after 30 mins by TR-FRET assay | ic50 | 0.0450 | uM |
| 5-methoxy-2-[[5-[2-[3-(2-methoxyethoxy)phenyl]phenyl]furan-2-carbonyl]amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.0631 | uM |
| 3-(2-carboxyethyl)-4-chloro-6-hexoxy-1H-indole-2-carboxylic acid | 1385395: Agonist activity at human GPR17 expressed in human 1321N1 cells assessed as induction of calcium mobilization after 1 hr by Oregon Green BAPTA-1/AM dye-based fluorescence assay | ec50 | 0.0670 | uM |
| N-[5-(2-cyanoethyl)-4,6-dimethoxypyrimidin-2-yl]-5-(1,3-thiazol-2-yl)-1H-pyrrole-3-sulfonamide | 2236111: Antagonist activity at untagged human GPR17S stably expressed in CHO-K1 cells assessed as inhibition of MDL29,951/IBMX-induced cAMP reduction preincubated for 5 mins followed by forskolin addition and measured after 30 mins by TR-FRET assay | ic50 | 0.0690 | uM |
| 2-[[5-(2-phenylphenyl)furan-2-carbonyl]amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.0794 | uM |
| 5-methoxy-2-[(2-naphthalen-1-yl-1,3-thiazole-4-carbonyl)amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.0794 | uM |
| N-[5-(2-fluoroethoxy)-4,6-dimethoxypyrimidin-2-yl]-5-(3-fluoro-2-pyridinyl)-1H-pyrrole-3-sulfonamide | 2236111: Antagonist activity at untagged human GPR17S stably expressed in CHO-K1 cells assessed as inhibition of MDL29,951/IBMX-induced cAMP reduction preincubated for 5 mins followed by forskolin addition and measured after 30 mins by TR-FRET assay | ic50 | 0.0850 | uM |
| N-[5-(2,2-difluoroethoxy)-4,6-dimethoxypyrimidin-2-yl]-5-(3-fluoro-2-pyridinyl)-1H-pyrrole-3-sulfonamide | 2236111: Antagonist activity at untagged human GPR17S stably expressed in CHO-K1 cells assessed as inhibition of MDL29,951/IBMX-induced cAMP reduction preincubated for 5 mins followed by forskolin addition and measured after 30 mins by TR-FRET assay | ic50 | 0.0990 | uM |
| 6-chloro-N-(4-chloro-5-methyl-1,2-thiazol-3-yl)-1H-indole-3-sulfonamide | 2264787: Inhibition of full length GPR17 (unknown origin) stably expressed in human 1321N1 cells incubated for 15 mins by cAMP based HTRF assay | ic50 | 0.1000 | uM |
| 6-chloro-N-[1-(2-chloroethyl)-5-cyanopyrazol-4-yl]-1H-indole-3-sulfonamide | 2264787: Inhibition of full length GPR17 (unknown origin) stably expressed in human 1321N1 cells incubated for 15 mins by cAMP based HTRF assay | ic50 | 0.1000 | uM |
| 6-chloro-N-(5-cyano-1-propylpyrazol-4-yl)-1H-indole-3-sulfonamide | 2264787: Inhibition of full length GPR17 (unknown origin) stably expressed in human 1321N1 cells incubated for 15 mins by cAMP based HTRF assay | ic50 | 0.1000 | uM |
| 6-chloro-N-[5-cyano-1-(3,3,3-trifluoropropyl)pyrazol-4-yl]-1H-indole-3-sulfonamide | 2264787: Inhibition of full length GPR17 (unknown origin) stably expressed in human 1321N1 cells incubated for 15 mins by cAMP based HTRF assay | ic50 | 0.1000 | uM |
| 6-chloro-N-[5-(trifluoromethyl)-1,3-thiazol-2-yl]-1H-indole-3-sulfonamide | 2264787: Inhibition of full length GPR17 (unknown origin) stably expressed in human 1321N1 cells incubated for 15 mins by cAMP based HTRF assay | ic50 | 0.1000 | uM |
| 2-[[5-[2-(3-methoxyphenyl)phenyl]furan-2-carbonyl]amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.1000 | uM |
| 5,6-dichloro-N-(4-chloro-5-methyl-1,2-oxazol-3-yl)-1H-indole-3-sulfonamide | 2264787: Inhibition of full length GPR17 (unknown origin) stably expressed in human 1321N1 cells incubated for 15 mins by cAMP based HTRF assay | ic50 | 0.1000 | uM |
| 3-(2-carboxyethyl)-4-chloro-6-pentoxy-1H-indole-2-carboxylic acid | 1385395: Agonist activity at human GPR17 expressed in human 1321N1 cells assessed as induction of calcium mobilization after 1 hr by Oregon Green BAPTA-1/AM dye-based fluorescence assay | ec50 | 0.1030 | uM |
| azane;[[(2R,3S,4R,5R)-3,4-dihydroxy-5-[6-(methylamino)purin-9-yl]oxolan-2-yl]methoxy-hydroxyphosphoryl] phosphono hydrogen phosphate | 480271: Antagonist activity at human GPR17 expressed in human 1321N1 cells assessed as inhibition of UDP-glucose-induced [35S]GTPgammaS binding after 30 mins by rapid filtration assay | ic50 | 0.1120 | uM |
| 3-(2-carboxyethyl)-6-hexoxy-1H-indole-2-carboxylic acid | 1385395: Agonist activity at human GPR17 expressed in human 1321N1 cells assessed as induction of calcium mobilization after 1 hr by Oregon Green BAPTA-1/AM dye-based fluorescence assay | ec50 | 0.1150 | uM |
| 3-(2-carboxyethyl)-4-chloro-6-octoxy-1H-indole-2-carboxylic acid | 1385395: Agonist activity at human GPR17 expressed in human 1321N1 cells assessed as induction of calcium mobilization after 1 hr by Oregon Green BAPTA-1/AM dye-based fluorescence assay | ec50 | 0.1170 | uM |
| 5-methoxy-2-[(6-naphthalen-1-ylpyridine-2-carbonyl)amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.1259 | uM |
| 5-methyl-2-[(5-naphthalen-1-ylfuran-2-carbonyl)amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.1259 | uM |
| 2-[(5-naphthalen-1-ylfuran-2-carbonyl)amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.1259 | uM |
| 5-methoxy-2-[[5-[2-(3-propan-2-ylphenyl)phenyl]furan-2-carbonyl]amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.1259 | uM |
| 5-fluoro-2-[[5-(2-propan-2-ylphenyl)furan-2-carbonyl]amino]benzoic acid | 2207393: Displacement of [3H]PSB-12150 from human GPR17 expressed in Flp-In T-REx system generated CHO cell membrane incubated for 1 hrs by liquid scintillation counter analysis | ki | 0.1380 | uM |
| 2-[[5-[2-(3-cyanophenyl)phenyl]furan-2-carbonyl]amino]-5-methoxybenzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.1585 | uM |
| 2-[[5-(2-bromophenyl)furan-2-carbonyl]amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.1585 | uM |
| 5-cyclopropyl-2-[(5-naphthalen-1-ylfuran-2-carbonyl)amino]benzoic acid | 2207385: Antagonist activity at wildtype human GPR17 expressed in human 1321N1 cells co-expressing pLVX-IRES assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition and measured immediately by plate reader analysis | ic50 | 0.1622 | uM |
| 4-methoxy-2-[(5-naphthalen-1-ylfuran-2-carbonyl)amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.1995 | uM |
| 4,5-difluoro-2-[(6-naphthalen-1-ylpyridine-2-carbonyl)amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.1995 | uM |
| 5-chloro-2-[(6-naphthalen-1-ylpyridine-2-carbonyl)amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.1995 | uM |
| 5-methoxy-2-[(5-naphthalen-1-ylfuran-2-carbonyl)amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.1995 | uM |
| 5-methoxy-2-[[5-(2-phenoxyphenyl)furan-2-carbonyl]amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.1995 | uM |
| 5-fluoro-2-[(2-naphthalen-1-yl-1,3-thiazole-4-carbonyl)amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.1995 | uM |
| 2-[[5-[2-(3-cyclopropyloxyphenyl)phenyl]furan-2-carbonyl]amino]-5-methoxybenzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.1995 | uM |
| 2-[[5-(2-methoxynaphthalen-1-yl)furan-2-carbonyl]amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.2512 | uM |
| 2-[[5-[2-(2-phenylethoxy)phenyl]furan-2-carbonyl]amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.2512 | uM |
| 4,5-difluoro-2-[(5-naphthalen-1-ylfuran-2-carbonyl)amino]benzoic acid | 2207381: Antagonist activity at human GPR17 expressed in Flp-In T-REx system generated CHO cells assessed as inhibition of MDL29,951-induced calcium mobilization preincubated for 30 mins followed by MDL29,951 addition by calcium 5 dye based FLIPR assay | ic50 | 0.2512 | uM |
| N-[5-(difluoromethoxy)-4,6-dimethoxypyrimidin-2-yl]-5-(1,3-thiazol-2-yl)-1H-pyrrole-3-sulfonamide | 2236111: Antagonist activity at untagged human GPR17S stably expressed in CHO-K1 cells assessed as inhibition of MDL29,951/IBMX-induced cAMP reduction preincubated for 5 mins followed by forskolin addition and measured after 30 mins by TR-FRET assay | ic50 | 0.2560 | uM |
CTD chemical–gene interactions
16 total (human), top 16 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| ochratoxin A | increases expression | 2 |
| Resveratrol | increases expression, decreases expression, affects cotreatment | 2 |
| Esketamine | increases expression | 1 |
| bisphenol A | affects cotreatment, increases methylation | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| enniatins | increases expression | 1 |
| Arsenic Trioxide | decreases expression | 1 |
| Fulvestrant | affects cotreatment, increases methylation | 1 |
| Acetaminophen | increases expression | 1 |
| Benzo(a)pyrene | increases methylation | 1 |
| Copper | affects cotreatment, increases expression | 1 |
| Diazinon | decreases expression | 1 |
| Estradiol | decreases expression, affects cotreatment | 1 |
| Plant Extracts | affects cotreatment, decreases expression | 1 |
| Progesterone | affects cotreatment, decreases expression | 1 |
| Triclosan | decreases expression | 1 |
ChEMBL screening assays
78 unique, capped per target: 57 functional, 21 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1107397 | Functional | Agonist activity at human GPR17 expressed in human 1321N1 cells assessed as induction of [35S]GTPgammaS binding after 30 mins by rapid filtration assay | Frontal affinity chromatography-mass spectrometry useful for characterization of new ligands for GPR17 receptor. — *J Med Chem* |
| CHEMBL3269448 | Binding | Binding affinity to human GPR17 expressed in CHO-K1 cell membranes assessed per mg protein after 60 mins by saturation curve study | Development of [(3)H]2-Carboxy-4,6-dichloro-1H-indole-3-propionic Acid ([(3)H]PSB-12150): A Useful Tool for Studying GPR17. — *ACS Med Chem Lett* |
Cellosaurus cell lines
2 cell lines: 1 spontaneously immortalized cell line, 1 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_KU60 | CHO-K1 GPR17 Gq | Spontaneously immortalized cell line | Female |
| CVCL_LA41 | PathHunter U2OS GPR17 beta-arrestin | Cancer cell line | Female |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
showing 60 of 76 trials:
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT00417066 | Phase 4 | COMPLETED | Flexible GnRH Antagonist vs Flare up GnRH Agonist Protocol in Poor Responders |
| NCT00732693 | Phase 4 | COMPLETED | Evaluation of Physiologic and Standard Sex Steroid Replacement Regimens in Women With Premature Ovarian Failure |
| NCT00837616 | Phase 4 | COMPLETED | Estrogen Dosing in Turner Syndrome: Pharmacology and Metabolism |
| NCT01853501 | Phase 4 | UNKNOWN | Effects of ADSC Therapy in Women With POF |
| NCT02783937 | Phase 4 | COMPLETED | Filgrastim for Premature Ovarian Insufficiency |
| NCT03535480 | Phase 4 | UNKNOWN | Autologous Bone Marrow Stem Cell Ovarian Transplantation to Restore Ovarian Function in Premature Ovarian Failure |
| NCT00140998 | Phase 3 | COMPLETED | Estrogen Treatment (Oral vs. Patches) in Turner Syndrome |
| NCT00001951 | Phase 2 | COMPLETED | Hormone Replacement in Young Women With Premature Ovarian Failure |
| NCT00370019 | Phase 2 | WITHDRAWN | Effects of an Estrogen Replacement Therapy Skin Patch on Ovulation in Women With Premature Ovarian Failure |
| NCT00429494 | Phase 2 | COMPLETED | GnRH Analogue for Ovarian Function Preservation in Hematopoietic Stem Cell Transplantation Patients |
| NCT03816852 | Phase 2 | SUSPENDED | The Safety and Efficiency Study of Mesenchymal Stem Cell (19#iSCLife®-POI) in Premature Ovarian Insufficiency |
| NCT04536467 | Phase 2 | UNKNOWN | Prevention of Chemotherapy-Induced Ovarian Failure With Goserelin in Premenopausal Lymphoma Patients |
| NCT06117982 | Phase 2 | COMPLETED | The Impact of Granulocyte Colony Stimulating Factor on Premature Ovarian Insufficiency |
| NCT02912104 | Phase 1 | COMPLETED | A Therapeutic Trial of Human Amniotic Epithelial Cells Transplantation for Primary Ovarian Failure |
| NCT03178695 | Phase 1 | COMPLETED | Inovium Ovarian Rejuvenation Trials |
| NCT04815213 | Phase 1 | ACTIVE_NOT_RECRUITING | The Use of Expandeded Mesenchymal Stromal Cells (MSC) in Premature Ovarian Failure (POF) in Adult Humans |
| NCT05138367 | Phase 1 | COMPLETED | Effects of UCA-PSCs in Women With POF |
| NCT06132542 | Phase 1 | UNKNOWN | Autologous ADMSC Transplantation in Patients With POI |
| NCT05989620 | Not specified | RECRUITING | Long-Term Development of Muscular Dystrophy Outcome Assessments |
| NCT00948857 | Phase 2/3 | TERMINATED | Dehydroepiandrosterone (DHEA) Treatment and Premature Ovarian Failure (POF) |
| NCT04031456 | Phase 2/3 | RECRUITING | Autologous PRP Infusion May Restore Ovarian Function and May Promote Folliculogenesis in POI Patients |
| NCT02043743 | Phase 1/2 | UNKNOWN | Autologous Stem Cells Transplantation in Patients With Idiopathic and Drug Induced Premature Ovarian Failure |
| NCT02062931 | Phase 1/2 | UNKNOWN | Autologous Mesenchymal Stem Cells Transplantation In Women With Premature Ovarian Failure |
| NCT02151890 | Phase 1/2 | COMPLETED | Pregnancy After Stem Cell Transplantation in Premature Ovarian Failure |
| NCT02372474 | Phase 1/2 | COMPLETED | It is a Real The First Baby Of Autologous Stem Cell Therapy in Premature Ovarian Failure |
| NCT02603744 | Phase 1/2 | UNKNOWN | Autologous Adipose Derived Mesenchymal Stromal Cells Transplantation in Women With Premature Ovarian Failure (POF) |
| NCT02644447 | Phase 1/2 | COMPLETED | Transplantation of HUC-MSCs With Injectable Collagen Scaffold for POF |
| NCT03069209 | Phase 1/2 | UNKNOWN | Autologous Bone Marrow-Derived Stem Cell Transplantation in Patients With Premature Ovarian Failure (POF) |
| NCT03985462 | Phase 1/2 | WITHDRAWN | Very Small Embryonic-like Stem Cells for Ovary |
| NCT04009473 | Phase 1/2 | UNKNOWN | Stem Cell Therapy and Growth Factor Ovarian in Vitro Activation |
| NCT04071574 | Phase 1/2 | COMPLETED | Comparative Study on the Efficacy of Ovarian Stimulation Protocols on the Success Rate of ICSI in Female Infertility |
| NCT04922398 | Phase 1/2 | UNKNOWN | Ovarian Injection of PRP (Platelet -Rich Plasma) Vs Normal Saline in Premature Ovarian Insufficiency |
| NCT05462379 | Phase 1/2 | ACTIVE_NOT_RECRUITING | Autologous Heterotopic Fresh Ovarian Graft in Woman With LACC Eligible for Pelvic Radiotherapy Treatment. |
| NCT06202547 | Phase 1/2 | COMPLETED | Intra-ovarian Injection of MSC-EVs in Idiopathic Premature Ovarian Failure |
| NCT01129947 | Early Phase 1 | WITHDRAWN | The Use of DHEA in Women With Premature Ovarian Failure |
| NCT05522634 | Early Phase 1 | UNKNOWN | A Clinical Study of Chinese Herbal Compound TJAOA101 in the Treatment of Premature Ovarian Insufficiency |
| NCT07308327 | Early Phase 1 | ACTIVE_NOT_RECRUITING | The Influence of Gut Microbiota on Ovarian Function: A Single-center, Randomized,Double Blind, Parallel-controlled, Exploratory Clinical Trial |
| NCT00001275 | Not specified | COMPLETED | Ovarian Follicle Function in Patients With Primary Ovarian Failure |
| NCT00001306 | Not specified | COMPLETED | Steroid Therapy in Autoimmune Premature Ovarian Failure |
| NCT00006156 | Not specified | COMPLETED | Feasibility Study for Development of an Early Test for Ovarian Failure |
| NCT00119925 | Not specified | UNKNOWN | ‘SPRING’-Study: Subfertility Guidelines: Patient Related Implementation in the Netherlands Among Gynaecologists |
| NCT00295087 | Not specified | COMPLETED | X-Chromosome Inactivation Status and Premature Ovarian Failure |
| NCT00417157 | Not specified | COMPLETED | Modified Natural Cycle Offers a Chance of Pregnancy in Patients With Poor Response and High Basal FSH |
| NCT00619333 | Not specified | UNKNOWN | Inactive FSH in Galactosemia |
| NCT00780897 | Not specified | UNKNOWN | Premature Ovarian Failure (Genetic and Physiopathologic Analysis) |
| NCT01187524 | Not specified | TERMINATED | The Natural History of Reproductive and Overall Health in Girls and Women With a Pre-Mutation in the FMR1 Gene; Creation of a Patient Registry |
| NCT01411644 | Not specified | UNKNOWN | Pheno- & Genotyping POF (WHO III) |
| NCT02086318 | Not specified | UNKNOWN | A New Algorithm to Predict Ovarian Age |
| NCT02467231 | Not specified | ACTIVE_NOT_RECRUITING | Ovarian Reserve After Cancer: Longitudinal Effects |
| NCT02696889 | Not specified | COMPLETED | Rejuvenation of Premature Ovarian Failure With Stem Cells |
| NCT02779374 | Not specified | TERMINATED | Autologous Bone Marrow Transplantation for Premature Ovarian Insufficiency |
| NCT03207412 | Not specified | UNKNOWN | Human Amniotic Epithelial Cells Treatment for Ovarian Insufficiency |
| NCT03381300 | Not specified | ACTIVE_NOT_RECRUITING | Preservation of Ovarian Cortex Tissue in Girls With Turner Syndrome |
| NCT03412487 | Not specified | UNKNOWN | Ovarian Histopathology and Laparoscopic Assessment of Premature Ovarian Failure |
| NCT03474120 | Not specified | UNKNOWN | Prospective Genetic Study in Patients With Ovarian Insufficiency |
| NCT03480412 | Not specified | UNKNOWN | Second Step Protocol in Poor Ovarian Responder (POR) |
| NCT03840824 | Not specified | COMPLETED | Blood Spot Self-administered Test and Assay |
| NCT03861715 | Not specified | UNKNOWN | Single Follicular Dexarelix for LH Suppression During Ovarian Stimulation in Oocyte Donors. |
| NCT03924648 | Not specified | COMPLETED | Endocan Levels in Women With Premature Ovarian Insufficiency |
| NCT04149028 | Not specified | COMPLETED | Platelet Rich Plasma Injection Into Ovary of Patients With Premature Ovarian Insufficiency |
Predicted chemistry — Sugi Predict
The predicted patent-compound landscape for GPR17 across ~30M SureChEMBL compounds — explore on Sugi Predict.
Related Atlas pages
- Targeted by drugs: Cangrelor, Galactose, Montelukast, Triphosphate
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): autosomal recessive limb-girdle muscular dystrophy type 2W