GSC2
gene geneOn this page
Summary
GSC2 (goosecoid homeobox 2, HGNC:4613) is a protein-coding gene on chromosome 22q11.21, encoding Homeobox protein goosecoid-2 (O15499). May have a role in development.
Goosecoidlike (GSCL), a homeodomain-containing gene, resides in the critical region for VCFS/DGS on 22q11. Velocardiofacial syndrome (VCFS) is a developmental disorder characterized by conotruncal heart defects, craniofacial anomalies, and learning disabilities. VCFS is phenotypically related to DiGeorge syndrome (DGS) and both syndromes are associated with hemizygous 22q11 deletions. Because many of the tissues and structures affected in VCFS/DGS derive from the pharyngeal arches of the developing embryo, it is believed that haploinsufficiency of a gene involved in embryonic development may be responsible for its etiology. The gene is expressed in a limited number of adult tissues, as well as in early human development.
Source: NCBI Gene 2928 — RefSeq curated summary.
At a glance
- GWAS associations: 1
- Clinical variants (ClinVar): 59 total — 4 pathogenic
- MANE Select transcript:
NM_005315
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:4613 |
| Approved symbol | GSC2 |
| Name | goosecoid homeobox 2 |
| Location | 22q11.21 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000063515 |
| Ensembl biotype | protein_coding |
| OMIM | 601845 |
| Entrez | 2928 |
Gene structure
Transcript identifiers
Ensembl transcripts: 1 — 1 protein_coding
ENST00000086933
RefSeq mRNA: 1 — MANE Select: NM_005315
NM_005315
CCDS: CCDS13757
Canonical transcript exons
ENST00000086933 — 3 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000331106 | 19146993 | 19149095 |
| ENSE00000650651 | 19149663 | 19149916 |
| ENSE00000650652 | 19150025 | 19150292 |
Expression profiles
Bgee: expression breadth broad, 11 present calls, max score 85.43.
Top tissues by expression
130 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 85.43 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 79.68 | gold quality |
| testis | UBERON:0000473 | 61.73 | gold quality |
| right testis | UBERON:0004534 | 60.96 | gold quality |
| left testis | UBERON:0004533 | 60.23 | gold quality |
| cortical plate | UBERON:0005343 | 44.05 | silver quality |
| colonic epithelium | UBERON:0000397 | 41.17 | gold quality |
| sural nerve | UBERON:0015488 | 40.94 | gold quality |
| bone marrow cell | CL:0002092 | 39.99 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 37.17 | gold quality |
| prefrontal cortex | UBERON:0000451 | 37.05 | gold quality |
| bone marrow | UBERON:0002371 | 36.95 | gold quality |
| apex of heart | UBERON:0002098 | 36.51 | gold quality |
| ventricular zone | UBERON:0003053 | 36.48 | gold quality |
| granulocyte | CL:0000094 | 36.03 | gold quality |
| ganglionic eminence | UBERON:0004023 | 35.49 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 34.93 | gold quality |
| skin of leg | UBERON:0001511 | 34.91 | silver quality |
| zone of skin | UBERON:0000014 | 34.40 | silver quality |
| skin of abdomen | UBERON:0001416 | 33.44 | silver quality |
| ectocervix | UBERON:0012249 | 33.31 | gold quality |
| frontal cortex | UBERON:0001870 | 32.94 | gold quality |
| primary visual cortex | UBERON:0002436 | 32.83 | gold quality |
| uterine cervix | UBERON:0000002 | 32.68 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 32.35 | gold quality |
| muscle tissue | UBERON:0002385 | 32.20 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 32.15 | gold quality |
| leukocyte | CL:0000738 | 31.90 | gold quality |
| nucleus accumbens | UBERON:0001882 | 31.27 | gold quality |
| monocyte | CL:0000576 | 30.52 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 0.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | no | 0.20 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
2 targets.
| Target | Regulation |
|---|---|
| GSC2 | |
| TH |
JASPAR motifs
| Motif | Name | Family |
|---|---|---|
| MA0891.1 | GSC2 | Paired-related HD factors |
| MA0891.2 | GSC2 | Paired-related HD factors |
JASPAR matrix evidence (PMIDs): PMID:9441739
Upstream regulators (CollecTRI, top): GSC2, GSC
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Gsc2 | ENSMUSG00000022738 |
| rattus_norvegicus | Gsc2 | ENSRNOG00000000282 |
Paralogs (50): ARX (ENSG00000004848), PAX6 (ENSG00000007372), PAX7 (ENSG00000009709), ALX4 (ENSG00000052850), PITX1 (ENSG00000069011), PAX2 (ENSG00000075891), RHOXF1 (ENSG00000101883), CRX (ENSG00000105392), EVX1 (ENSG00000106038), PAX4 (ENSG00000106331), NOBOX (ENSG00000106410), PITX3 (ENSG00000107859), PHOX2B (ENSG00000109132), OTX1 (ENSG00000115507), PRRX1 (ENSG00000116132), VSX2 (ENSG00000119614), ESX1 (ENSG00000123576), PAX8 (ENSG00000125618), PAX1 (ENSG00000125813), RHOXF2 (ENSG00000131721), GSC (ENSG00000133937), RAX (ENSG00000134438), PAX3 (ENSG00000135903), ALX3 (ENSG00000156150), HESX1 (ENSG00000163666), PITX2 (ENSG00000164093), UNCX (ENSG00000164853), PHOX2A (ENSG00000165462), OTX2 (ENSG00000165588), DRGX (ENSG00000165606), PRRX2 (ENSG00000167157), SHOX2 (ENSG00000168779), OTP (ENSG00000171540), RAX2 (ENSG00000173976), EVX2 (ENSG00000174279), PROP1 (ENSG00000175325), ISX (ENSG00000175329), ALX1 (ENSG00000180318), MIXL1 (ENSG00000185155), SHOX (ENSG00000185960)
Protein
Protein identifiers
Homeobox protein goosecoid-2 — O15499 (reviewed: O15499)
Alternative names: Homeobox protein goosecoid-like
All UniProt accessions (1): O15499
UniProt curated annotations — full annotation on UniProt →
Function. May have a role in development. May regulate its own transcription. May bind the bicoid consensus sequence TAATCC.
Subcellular location. Nucleus.
Tissue specificity. Detected in adult testis and pituitary, and in 9-10 week fetal tissue (thorax). Probably expressed in other tissues at low levels.
Similarity. Belongs to the paired homeobox family. Bicoid subfamily.
RefSeq proteins (1): NP_005306* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001356 | HD | Domain |
| IPR009057 | Homeodomain-like_sf | Homologous_superfamily |
| IPR017970 | Homeobox_CS | Conserved_site |
| IPR051440 | Goosecoid-like_HB | Family |
Pfam: PF00046
UniProt features (5 total): region of interest 2, chain 1, DNA-binding region 1, sequence variant 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O15499-F1 | 70.08 | 0.30 |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 45 (showing top):
BENPORATH_ES_WITH_H3K27ME3, HU_ANGIOGENESIS_DN, GOMF_SEQUENCE_SPECIFIC_DNA_BINDING, P53_DN.V2_UP, PRC2_EED_DN.V1_UP, GSE13522_WT_VS_IFNG_KO_SKIN_UP, GOMF_TRANSCRIPTION_REGULATOR_ACTIVITY, GSE14386_UNTREATED_VS_IFNA_TREATED_ACT_PBMC_MS_PATIENT_UP, GSE10325_BCELL_VS_LUPUS_BCELL_UP, GSE13306_RA_VS_UNTREATED_TREG_DN, GSE14769_20MIN_VS_360MIN_LPS_BMDM_DN, GSE14769_40MIN_VS_360MIN_LPS_BMDM_DN, GSE15750_WT_VS_TRAF6KO_DAY6_EFF_CD8_TCELL_UP, WP_22Q112_COPY_NUMBER_VARIATION_SYNDROME, MYOCD_TARGET_GENES
GO Biological Process (3): regulation of transcription by RNA polymerase II (GO:0006357), anatomical structure morphogenesis (GO:0009653), regulation of DNA-templated transcription (GO:0006355)
GO Molecular Function (7): RNA polymerase II cis-regulatory region sequence-specific DNA binding (GO:0000978), DNA-binding transcription factor activity, RNA polymerase II-specific (GO:0000981), DNA binding (GO:0003677), DNA-binding transcription factor activity (GO:0003700), sequence-specific DNA binding (GO:0043565), sequence-specific double-stranded DNA binding (GO:1990837), protein binding (GO:0005515)
GO Cellular Component (2): chromatin (GO:0000785), nucleus (GO:0005634)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| regulation of DNA-templated transcription | 2 |
| RNA polymerase II transcription regulatory region sequence-specific DNA binding | 2 |
| transcription by RNA polymerase II | 1 |
| developmental process | 1 |
| anatomical structure development | 1 |
| DNA-templated transcription | 1 |
| regulation of gene expression | 1 |
| regulation of RNA biosynthetic process | 1 |
| cis-regulatory region sequence-specific DNA binding | 1 |
| chromatin | 1 |
| DNA-binding transcription factor activity | 1 |
| regulation of transcription by RNA polymerase II | 1 |
| nucleic acid binding | 1 |
| transcription cis-regulatory region binding | 1 |
| transcription regulator activity | 1 |
| DNA binding | 1 |
| double-stranded DNA binding | 1 |
| sequence-specific DNA binding | 1 |
| binding | 1 |
| chromosome | 1 |
| cellular anatomical structure | 1 |
| intracellular membrane-bounded organelle | 1 |
Protein interactions and networks
STRING
348 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| GSC2 | GNB1L | Q9BYB4 | 803 |
| GSC2 | SLC25A1 | P53007 | 780 |
| GSC2 | TBX1 | O43435 | 721 |
| GSC2 | PRODH | O43272 | 714 |
| GSC2 | PRODH | O43272 | 693 |
| GSC2 | SEPTIN5 | Q99719 | 674 |
| GSC2 | GP1BB | P13224 | 671 |
| GSC2 | RANBP1 | P43487 | 640 |
| GSC2 | DGCR2 | P98153 | 630 |
| GSC2 | CLTCL1 | P53675 | 626 |
| GSC2 | DGCR6L | Q9BY27 | 596 |
| GSC2 | CLDN5 | O00501 | 562 |
| GSC2 | COMT | P21964 | 562 |
| GSC2 | ZNF74 | Q16587 | 560 |
| GSC2 | DGCR6 | Q14129 | 557 |
IntAct
173 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| GSC2 | GTF2H5 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | ASPH | psi-mi:“MI:0915”(physical association) | 0.560 |
| SDCBP | GSC2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | GUCY1A2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | BNIP2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | COL8A1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | psi-mi:“MI:0915”(physical association) | 0.560 | |
| GSC2 | CIAO2A | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | MAPK9 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | MRPS23 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | ANXA5 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | EGLN3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | GALNT11 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | PDE4C | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | GUCA1A | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | PRKAB2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | KLHL38 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | GCM2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | FKBP6 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | ETFDH | psi-mi:“MI:0915”(physical association) | 0.560 |
| TNPO2 | GSC2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | CRCP | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | CSNK2A1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | CDKN2D | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | MORF4L1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | PTER | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | KRTAP5-9 | psi-mi:“MI:0915”(physical association) | 0.560 |
| FAM221B | GSC2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | CALR | psi-mi:“MI:0915”(physical association) | 0.560 |
| GSC2 | LTO1 | psi-mi:“MI:0915”(physical association) | 0.560 |
BioGRID (61): GSC2 (Two-hybrid), GSC2 (Two-hybrid), TIPIN (Two-hybrid), FKBP6 (Two-hybrid), MID2 (Two-hybrid), PACSIN2 (Two-hybrid), CSNK2A1 (Two-hybrid), DYRK1B (Two-hybrid), TNPO2 (Two-hybrid), PDE4C (Two-hybrid), UBE2R2 (Two-hybrid), MAD2L2 (Two-hybrid), YPEL5 (Two-hybrid), GTSF1L (Two-hybrid), GCM2 (Two-hybrid)
ESM2 similar proteins: A0A0U1RQS6, A0A286YF58, A0A494C0N9, A0A494C0Y3, A0A7I2V3R4, A2AEV7, A2VDX9, A5PJP1, A6NCS6, A6NIN4, A6NJG2, A6NLJ0, A8MVW0, B7Z1M9, B8ZZ34, C9JTQ0, M0QZC1, O15499, O43541, P03971, P08353, P0C7L8, P0CG09, P0DPE3, P28283, P36313, P37318, P37319, Q0PHV7, Q1HCM0, Q29RM6, Q2EGB9, Q2KJ18, Q2M3V2, Q5VY09, Q6ZW31, Q8BLS7, Q8BRJ4, Q8N4B5, Q8NCU7
Diamond homologs: A0A1W2PPK0, A0A1W2PPM1, A1A546, A1YEY5, A1YFI3, A1YG57, A1YGA2, A2T733, A2T777, A2T7P4, A6NFQ7, G5EC89, L8E946, O14813, O15499, O35690, O42250, O42356, O42357, O42477, O70137, O73917, O75360, O95076, O97670, P0DMV5, P26367, P26630, P29454, P41935, P47237, P47238, P53544, P53545, P53546, P54366, P55813, P55864, P56915, P56916
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
59 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 4 |
| Likely pathogenic | 0 |
| Uncertain significance | 53 |
| Likely benign | 1 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (4)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1180540 | GRCh37/hg19 22q11.21(chr22:18889571-21464697)x1 | Pathogenic |
| 1879566 | GRCh37/hg19 22q11.21(chr22:18893888-21570386)x1 | Pathogenic |
| 526039 | NC_000022.10:g.(?18910310)(19770565_?)del | Pathogenic |
| 929331 | GRCh37/hg19 22q11.21(chr22:18886915-21463730)x1 | Pathogenic |
SpliceAI
347 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 22:19149424:G:GC | acceptor_gain | 1.0000 |
| 22:19149658:CTCA:C | donor_loss | 1.0000 |
| 22:19149659:TCAC:T | donor_loss | 1.0000 |
| 22:19149660:CAC:C | donor_loss | 1.0000 |
| 22:19149661:A:AC | donor_gain | 1.0000 |
| 22:19149661:A:C | donor_loss | 1.0000 |
| 22:19149662:C:CC | donor_gain | 1.0000 |
| 22:19149346:C:A | donor_gain | 0.9900 |
| 22:19149661:ACCT:A | donor_gain | 0.9900 |
| 22:19149662:CCT:C | donor_gain | 0.9900 |
| 22:19149662:CCTC:C | donor_gain | 0.9900 |
| 22:19149415:C:CT | acceptor_gain | 0.9800 |
| 22:19149416:A:T | acceptor_gain | 0.9800 |
| 22:19149424:G:C | acceptor_gain | 0.9800 |
| 22:19149657:ACTC:A | donor_loss | 0.9800 |
| 22:19149426:G:C | acceptor_gain | 0.9700 |
| 22:19149656:CACT:C | donor_loss | 0.9700 |
| 22:19149183:T:TA | donor_gain | 0.9600 |
| 22:19150023:AC:A | donor_gain | 0.9600 |
| 22:19150024:CC:C | donor_gain | 0.9600 |
| 22:19149183:TCGCA:T | donor_gain | 0.9500 |
| 22:19149249:G:A | donor_gain | 0.9500 |
| 22:19149322:T:TA | donor_gain | 0.9500 |
| 22:19149426:G:GC | acceptor_gain | 0.9500 |
| 22:19149718:A:AC | donor_gain | 0.9500 |
| 22:19149719:C:CC | donor_gain | 0.9500 |
| 22:19150018:CACT:C | donor_loss | 0.9500 |
| 22:19150019:ACTC:A | donor_loss | 0.9500 |
| 22:19150020:CTCA:C | donor_loss | 0.9500 |
| 22:19150021:T:TA | donor_loss | 0.9500 |
AlphaMissense
1285 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 22:19149083:T:C | N176D | 0.999 |
| 22:19149087:G:C | F174L | 0.999 |
| 22:19149087:G:T | F174L | 0.999 |
| 22:19149089:A:G | F174L | 0.999 |
| 22:19149727:T:C | Y150C | 0.999 |
| 22:19149741:G:C | F145L | 0.999 |
| 22:19149741:G:T | F145L | 0.999 |
| 22:19149743:A:G | F145L | 0.999 |
| 22:19149777:G:C | F133L | 0.999 |
| 22:19149777:G:T | F133L | 0.999 |
| 22:19149778:A:C | F133C | 0.999 |
| 22:19149778:A:G | F133S | 0.999 |
| 22:19149779:A:G | F133L | 0.999 |
| 22:19149081:G:C | N176K | 0.998 |
| 22:19149081:G:T | N176K | 0.998 |
| 22:19149082:T:C | N176S | 0.998 |
| 22:19149082:T:G | N176T | 0.998 |
| 22:19149084:C:A | K175N | 0.998 |
| 22:19149084:C:G | K175N | 0.998 |
| 22:19149088:A:G | F174S | 0.998 |
| 22:19149728:A:G | Y150H | 0.998 |
| 22:19149742:A:C | F145C | 0.998 |
| 22:19149742:A:G | F145S | 0.998 |
| 22:19149082:T:A | N176I | 0.997 |
| 22:19149743:A:T | F145I | 0.997 |
| 22:19149754:A:T | L141H | 0.997 |
| 22:19149069:T:A | K180N | 0.996 |
| 22:19149069:T:G | K180N | 0.996 |
| 22:19149080:G:T | R177S | 0.996 |
| 22:19149088:A:C | F174C | 0.996 |
dbSNP variants (sampled 300 via entrez): RS1000833361 (22:19151594 C>G), RS1000906962 (22:19151853 A>G), RS1001015822 (22:19146688 A>G), RS1001099218 (22:19152029 G>A), RS1001983311 (22:19149212 G>A,C), RS1003190868 (22:19148600 A>G), RS1004952958 (22:19149232 G>A,C), RS1005261635 (22:19149337 C>A), RS1005847943 (22:19148771 C>A,G,T), RS1007695058 (22:19151231 G>A,C), RS1008364609 (22:19148800 G>A,C,T), RS1009113176 (22:19149555 G>A,C), RS1009470297 (22:19149719 C>G,T), RS1010627674 (22:19146713 A>T), RS1011723882 (22:19149203 G>T)
Disease associations
OMIM: gene MIM:601845 | disease phenotypes: MIM:188400
GenCC curated gene-disease
Mondo (1): DiGeorge syndrome (MONDO:0008564)
Orphanet (1): 22q11.2 deletion syndrome (Orphanet:567)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
1 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001639_30 | Metabolite levels | 3.000000e-11 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004723 | coronary artery calcification |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D004062 | DiGeorge Syndrome | C05.660.207.103.500; C14.240.400.021.500; C14.280.400.044.500; C15.604.451.249.500; C16.131.077.019.500; C16.131.240.400.021.500; C16.131.260.019.500; C16.131.482.249.500; C16.131.621.207.103.500; C16.320.180.019.500; C19.642.482.500.500 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
7 total (human), top 7 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Resveratrol | affects cotreatment, decreases expression | 1 |
| Benzo(a)pyrene | affects methylation | 1 |
| Cadmium | increases expression | 1 |
| Plant Extracts | affects cotreatment, decreases expression | 1 |
| Valproic Acid | increases methylation | 1 |
| Asbestos, Crocidolite | decreases methylation | 1 |
| Asbestos, Amosite | decreases methylation | 1 |
Clinical trials (associated diseases)
31 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00395538 | PHASE3 | TERMINATED | Effects of PTH Replacement on Bone in Hypoparathyroidism |
| NCT00576407 | PHASE2 | COMPLETED | Thymus Transplantation in DiGeorge Syndrome #668 |
| NCT00576836 | PHASE2 | COMPLETED | Thymus Transplantation Dose in DiGeorge #932 |
| NCT01821781 | PHASE2 | ACTIVE_NOT_RECRUITING | Immune Disorder HSCT Protocol |
| NCT05149898 | PHASE2 | COMPLETED | Open-Label Study of ZYN002 Administered as a Transdermal Gel to Children and Adolescents With 22q11.2 Deletion Syndrome (INSPIRE) |
| NCT07284641 | PHASE2 | RECRUITING | Hematopoietic Stem Cell Transplantation (HSCT) for Common Variable Immunodeficiency (CVID) and Other Autoimmune Manifestations of Primary Immune Regulatory Disorders (PIRD) |
| NCT00566488 | PHASE1 | COMPLETED | Parathyroid and Thymus Transplantation in DiGeorge #931 |
| NCT00579709 | PHASE1 | COMPLETED | Thymus Transplantation With Immunosuppression |
| NCT00849888 | PHASE1 | TERMINATED | Serum-Free Thymus Transplantation in DiGeorge Anomaly |
| NCT02895906 | PHASE1 | COMPLETED | Safety and Efficacy Study of NFC-1 in Subjects Aged 12-17 Years With 22q11.2DS & Associated Neuropsychiatric Conditions |
| NCT00579527 | PHASE1/PHASE2 | COMPLETED | Phase I/II Thymus Transplantation With Immunosuppression #950 |
| NCT00004351 | Not specified | COMPLETED | Study of Phenotype and Genotype Correlations in Patients With Contiguous Gene Deletion Syndromes |
| NCT00005102 | Not specified | UNKNOWN | Immunologic Evaluation in Patients With DiGeorge Syndrome or Velocardiofacial Syndrome |
| NCT00105274 | Not specified | COMPLETED | Velocardiofacial (VCFS; 22q11.2; DiGeorge) Syndrome Study |
| NCT00278005 | Not specified | TERMINATED | Infection in DiGeorge Following CHD Surgery |
| NCT00556530 | Not specified | RECRUITING | Examining Genetic Factors That Affect the Severity of 22q11.2 Deletion Syndrome |
| NCT00916955 | Not specified | COMPLETED | Genetic Modifiers for 22q11.2 Syndrome |
| NCT01220531 | Not specified | COMPLETED | Thymus Transplantation Safety-Efficacy |
| NCT01781923 | Not specified | COMPLETED | Cognitive Remediation in 22q11DS |
| NCT02381457 | Not specified | COMPLETED | SNP-based Microdeletion and Aneuploidy RegisTry (SMART) |
| NCT02430584 | Not specified | UNKNOWN | Whole Blood Specimen Collection From Pregnant Subjects |
| NCT02460328 | Not specified | COMPLETED | Resolution of Primary Immune Defect in 22q11.2 Deletion Syndrome |
| NCT02787486 | Not specified | COMPLETED | Expanded Noninvasive Genomic Medical Assessment: The Enigma Study |
| NCT03284060 | Not specified | TERMINATED | Social Cognition Training and Cognitive Remediation |
| NCT04141540 | Not specified | COMPLETED | Molecular Variants Associated With Schizophrenia: Differential Analysis of Monozygotic Twins With Variable Phenotypic 22q11 |
| NCT04373226 | Not specified | TERMINATED | Arithmetic Abilities in Children With 22q11.2DS |
| NCT04639388 | Not specified | RECRUITING | Understanding of Psychotic Disorders in Children With 22q11.2DS |
| NCT04639960 | Not specified | TERMINATED | Neuroprotective Effects of Risperdal on Brain and Cognition in 22q11 Deletion Syndrome |
| NCT04647500 | Not specified | COMPLETED | Effects of Methylphenidate on Brain and Cognition in 22q11 Deletion Syndrome |
| NCT05924347 | Not specified | RECRUITING | Early Scoliotic Changes in Children at Increased Risk for Scoliosis Development |
| NCT07493096 | Not specified | RECRUITING | Intensive Multimodal Neurorehabilitation Targeting Neuroplasticity in Pediatric Neurodevelopmental and Chromosomal Disorders |
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): DiGeorge syndrome