GSK3B
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Summary
GSK3B (glycogen synthase kinase 3 beta, HGNC:4617) is a protein-coding gene on chromosome 3q13.33, encoding Glycogen synthase kinase-3 beta (P49841). Constitutively active protein kinase that acts as a negative regulator in the hormonal control of glucose homeostasis, Wnt signaling and regulation of transcription factors and microtubules, by phosphorylating and inactivating glycogen synthase (GYS1 or GYS2), EIF2B, CTNNB1/beta….
The protein encoded by this gene is a serine-threonine kinase belonging to the glycogen synthase kinase subfamily. It is a negative regulator of glucose homeostasis and is involved in energy metabolism, inflammation, ER-stress, mitochondrial dysfunction, and apoptotic pathways. Defects in this gene have been associated with Parkinson disease and Alzheimer disease.
Source: NCBI Gene 2932 — RefSeq curated summary.
At a glance
- Gene–disease (curated): neurodevelopmental disorder (Definitive, GenCC)
- GWAS associations: 8
- Clinical variants (ClinVar): 76 total — 2 pathogenic, 1 likely-pathogenic
- Phenotypes (HPO): 1
- Druggable target: yes — 67 molecules with ChEMBL bioactivity
- Cancer driver (intOGen): loss-of-function (tumor-suppressor-like) across 1 cancer types
- Transcription factor: yes — 10 downstream targets (CollecTRI)
- MANE Select transcript:
NM_001146156
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:4617 |
| Approved symbol | GSK3B |
| Name | glycogen synthase kinase 3 beta |
| Location | 3q13.33 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000082701 |
| Ensembl biotype | protein_coding |
| OMIM | 605004 |
| Entrez | 2932 |
Gene structure
Transcript identifiers
Ensembl transcripts: 71 — 26 protein_coding, 21 nonsense_mediated_decay, 20 protein_coding_CDS_not_defined, 4 retained_intron
ENST00000264235, ENST00000316626, ENST00000473886, ENST00000474830, ENST00000650344, ENST00000676566, ENST00000676650, ENST00000676722, ENST00000676723, ENST00000676733, ENST00000676743, ENST00000676775, ENST00000676844, ENST00000676887, ENST00000676890, ENST00000676910, ENST00000676948, ENST00000677034, ENST00000677046, ENST00000677067, ENST00000677069, ENST00000677128, ENST00000677169, ENST00000677338, ENST00000677362, ENST00000677400, ENST00000677423, ENST00000677483, ENST00000677502, ENST00000677530, ENST00000677648, ENST00000677716, ENST00000677788, ENST00000677804, ENST00000677870, ENST00000677875, ENST00000677878, ENST00000677885, ENST00000677903, ENST00000677959, ENST00000677995, ENST00000678013, ENST00000678064, ENST00000678121, ENST00000678159, ENST00000678181, ENST00000678210, ENST00000678245, ENST00000678286, ENST00000678342, ENST00000678350, ENST00000678377, ENST00000678439, ENST00000678509, ENST00000678561, ENST00000678608, ENST00000678678, ENST00000678754, ENST00000678787, ENST00000678967, ENST00000679066, ENST00000679068, ENST00000679085, ENST00000679131, ENST00000679164, ENST00000679188, ENST00000679194, ENST00000679201, ENST00000679206, ENST00000899265, ENST00000899266
RefSeq mRNA: 3 — MANE Select: NM_001146156
NM_001146156, NM_001354596, NM_002093
CCDS: CCDS2996, CCDS54628, CCDS93346
Canonical transcript exons
ENST00000264235 — 11 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001149998 | 119843255 | 119843353 |
| ENSE00001206838 | 120093347 | 120094447 |
| ENSE00001863284 | 119821321 | 119826855 |
| ENSE00002371679 | 119923373 | 119923483 |
| ENSE00002373333 | 120002046 | 120002239 |
| ENSE00002375726 | 119947268 | 119947351 |
| ENSE00002376570 | 119916044 | 119916174 |
| ENSE00002378955 | 119905755 | 119905852 |
| ENSE00002423863 | 119912704 | 119912810 |
| ENSE00003476725 | 119876413 | 119876508 |
| ENSE00003549723 | 119863419 | 119863605 |
Expression profiles
Bgee: expression breadth ubiquitous, 288 present calls, max score 98.84.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 38.7487 / max 357.5144, expressed in 1819 samples.
FANTOM5 promoters (10 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 44044 | 25.2393 | 1817 |
| 44045 | 5.8006 | 1718 |
| 44040 | 2.0009 | 693 |
| 44046 | 1.9290 | 1236 |
| 44047 | 1.0313 | 593 |
| 44043 | 0.9428 | 680 |
| 44042 | 0.6717 | 329 |
| 44038 | 0.5186 | 254 |
| 44039 | 0.4482 | 191 |
| 44041 | 0.1662 | 60 |
Top tissues by expression
299 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| calcaneal tendon | UBERON:0003701 | 98.84 | gold quality |
| adrenal tissue | UBERON:0018303 | 97.76 | gold quality |
| colonic epithelium | UBERON:0000397 | 96.96 | gold quality |
| sural nerve | UBERON:0015488 | 96.74 | gold quality |
| buccal mucosa cell | CL:0002336 | 95.66 | gold quality |
| upper leg skin | UBERON:0004262 | 95.48 | gold quality |
| cortical plate | UBERON:0005343 | 95.32 | gold quality |
| tongue squamous epithelium | UBERON:0006919 | 95.09 | gold quality |
| ventricular zone | UBERON:0003053 | 94.73 | gold quality |
| ganglionic eminence | UBERON:0004023 | 94.54 | gold quality |
| postcentral gyrus | UBERON:0002581 | 94.20 | gold quality |
| left testis | UBERON:0004533 | 93.97 | gold quality |
| parietal lobe | UBERON:0001872 | 93.81 | gold quality |
| right testis | UBERON:0004534 | 93.70 | gold quality |
| testis | UBERON:0000473 | 93.56 | gold quality |
| skin of hip | UBERON:0001554 | 93.42 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 92.99 | gold quality |
| corpus epididymis | UBERON:0004359 | 92.83 | gold quality |
| islet of Langerhans | UBERON:0000006 | 92.77 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 92.75 | gold quality |
| monocyte | CL:0000576 | 92.61 | gold quality |
| blood | UBERON:0000178 | 92.57 | gold quality |
| tendon | UBERON:0000043 | 92.32 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 92.29 | gold quality |
| tonsil | UBERON:0002372 | 92.25 | gold quality |
| skin of abdomen | UBERON:0001416 | 92.22 | gold quality |
| superior vestibular nucleus | UBERON:0007227 | 92.18 | gold quality |
| corpus callosum | UBERON:0002336 | 92.14 | gold quality |
| mononuclear cell | CL:0000842 | 92.05 | gold quality |
| leukocyte | CL:0000738 | 91.94 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 5.28 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
10 targets.
| Target | Regulation |
|---|---|
| CCND1 | Activation |
| CDKN1A | Repression |
| LGALS3 | Activation |
| MMP9 | Activation |
| MYH6 | Activation |
| NR3C1 | Activation |
| POU5F1 | Repression |
| RELA | Activation |
| SOX2 | Repression |
| TNNT2 | Activation |
Upstream regulators (CollecTRI, top): AP1, AR, ARID4B, CDX2, CEBPA, CEBPB, CREB1, EGR1, ELF1, ETS2, FOXO3, HNF4A, KAT7, KLF6, MEF2A, MITF, MYB, MYC, NFATC4, NFE2L2, NFKB1, NFKBIA, PAX3, PITX2, POU4F2, PPARA, RFX2, RFX3, SNAI1, SP3, STAT3, TFCP2, TP53, VEZF1
miRNA regulators (miRDB)
375 targeting GSK3B, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-8485 | 100.00 | 77.57 | 4731 |
| HSA-MIR-3646 | 100.00 | 73.56 | 5283 |
| HSA-MIR-4795-3P | 100.00 | 74.62 | 4024 |
| HSA-MIR-3924 | 100.00 | 72.09 | 2394 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-LET-7A-3P | 100.00 | 74.03 | 3932 |
| HSA-LET-7B-3P | 100.00 | 74.08 | 3913 |
| HSA-LET-7F-1-3P | 100.00 | 74.02 | 3928 |
| HSA-MIR-98-3P | 100.00 | 74.08 | 3907 |
| HSA-MIR-126-5P | 100.00 | 72.71 | 3180 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-4533 | 100.00 | 69.48 | 2758 |
| HSA-MIR-9-5P | 100.00 | 72.28 | 2361 |
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-7110-3P | 100.00 | 73.18 | 2486 |
| HSA-MIR-3120-5P | 100.00 | 65.56 | 965 |
| HSA-MIR-6873-3P | 100.00 | 71.42 | 2626 |
| HSA-MIR-4768-5P | 100.00 | 69.49 | 2861 |
| HSA-MIR-29A-3P | 100.00 | 73.11 | 1835 |
| HSA-MIR-29B-3P | 100.00 | 73.18 | 1833 |
| HSA-MIR-29C-3P | 100.00 | 73.15 | 1833 |
| HSA-MIR-4692 | 100.00 | 67.32 | 2066 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-196A-1-3P | 99.99 | 72.15 | 2772 |
| HSA-MIR-513B-5P | 99.99 | 69.96 | 2150 |
Literature-anchored findings (GeneRIF, showing 40)
- The intracellular distribution of GSK-3 beta is dynamically regulated by signaling cascades, and apoptotic stimuli cause increased nuclear levels of GSK-3 beta, which facilitates interactions with nuclear substrates. (PMID:11495916)
- Protein kinase A enhances, whereas glycogen synthase kinase-3 beta inhibits, the activity of the exon 2-encoded transactivator domain of heterogeneous nuclear ribonucleoprotein D in a hierarchical fashion. (PMID:11903055)
- Arg(96) mutant has a dominant-negative effect on GSK-3beta-dependent phosphorylation of beta-catenin and targeting of beta-catenin for degradation requires prior priming through phosphorylation of Ser(45) (PMID:11967263)
- signaling systems determining cell fate appear to be important targets of mood stabilizers, and these may include signaling pathways encompassing GSK3beta, including transcription factors regulated by GSK3beta(REVIEW) (PMID:11986994)
- reacts with p53 protein after dna damage (PMID:12048243)
- Human serum and glucocorticoid-inducible kinase-like kinase (SGKL) phosphorylates glycogen syntheses kinase 3 beta (GSK-3beta) at serine-9 through direct interaction (PMID:12054501)
- improves insulin action and glucose metabolism in skeletal muscle (PMID:12086949)
- GSK3b binds to and phosphorylates serine493 in glutamate E segment of NEFH (PMID:12130654)
- A-kinase anchoring protein AKAP220 binds to this enzyme and mediates protein kinase A-dependent inhibition of GSK-3beta (PMID:12147701)
- GSK3beta functions at the nodal point of converging signaling pathways in endothelial cells to regulate vessel growth through its control of vascular cell migration and survival. (PMID:12167628)
- Glycogen synthase kinase 3 beta influenced post-natal maturation and differentiation of neurons in vivo in transgenic mice that overexpress a constitutively active GSK-3beta. (PMID:12182887)
- Data show that endoplasmic reticulum stress induced by thapsigargin not only activated the apoptosis effector caspase-3 but also caused a large and prolonged increase in the activity of glycogen synthase kinase-3beta. (PMID:12228224)
- GSK-3 beta is inhibited by endothelial cell costimulation, allowing nuclear accumulation of NFAT and prolonging IL-2 synthesis in the presence of cyclosporin A. (PMID:12244165)
- inhibition of GSK3beta activity appears to trigger nuclear accumulation of cyclin D1 and cell cycle progression (PMID:12364325)
- GSK3b expresion is regulated by reelin (PMID:12376533)
- Fresh lymphocytes from schizophrenic patients showed no difference in GSK-3 alpha and GSK-3beta mRNA levels, GSK-3beta protein levels, or total GSK-3 (alpha+beta) enzyme activity compared with findings in control subjects. (PMID:12379450)
- role in phosphorylating tau protein (PMID:12387894)
- Data report the crystal structure of glycogen synthase kinase 3beta (GSK3beta) in complex with a minimal GSK3beta-binding segment of axin, at 2.4 A resolution. (PMID:12554650)
- plays a role in Alzheimer disease and other CNS disorders (REVIEW) (PMID:12566926)
- GSK3 beta functions as a natural activator of MEKK1 (PMID:12584189)
- Messenger RNA of beta-catenin and Tcf-4, but not GSK-3beta, was found to be overexpressed in HCC(hepatocellular carcinoma). (PMID:12603528)
- role in mouse hepatic carcinogenesis (PMID:12663502)
- first demonstration that glycogen synthase kinase-3beta associates with type 1 protein phosphatase/inhibitor-2 (PP1C/I-2) complex and phosphorylates I-2 at T72 in intact cells (PMID:12761178)
- Cell adhesion to the extracellular matrix protein fibronectin modulates radiation-dependent G2 phase arrest and involve this enzyme in vitro. (PMID:12778079)
- GSK-3 regulates its own phosphorylation status (PMID:12796505)
- manipulation of GSK-3beta activity may be a mechanism by which HHV-8 latency-associated nuclear antigen (LANA) may modify transcriptional activity and contribute to the phenotype of HHV-8 primary effusion lymphoma. (PMID:12829841)
- molecular cross-talk between glycogen synthase kinase-3 beta (GSK-3 beta) and the p105 precursor of the NF-kappa B p50 subunit (PMID:12871932)
- glycogen synthase kinase-3beta is suppressed by Akt in prostate cancer cells which leads to the phosphorylation of cAMP-response element-binding protein (PMID:12900420)
- Overexpression of phospho-GSK-3beta is associated with hepatocellular carcinoma (PMID:12969793)
- possible role of GSK-3 beta, a pro-apoptotic factor participating in signal transduction involved in cell survival, is discussed in relation to schizophrenia (PMID:14518171)
- Increased expression of glycogen synthase kinase 3 is associated with ovarian epithelial cell transformation and in tumour progression (PMID:14520463)
- role in binding to and promoting action of p53 (PMID:14523002)
- multisite phosphorylation by Cdk2 and GSK3 controls cyclin E degradation (PMID:14536078)
- GSK3beta is a potential regulator of platelet function (PMID:14550568)
- activation of Csk and GSK-3beta by Galphaq may contribute to the physiological and pathological effects of Gq-coupled receptors (PMID:14561750)
- a mechanism involving GSK-3beta activation may be responsible for tumor necrosis factor-related apoptosis-inducing ligand resistance in prostate cancer cells (PMID:14617795)
- TSH/cAMP-stimulated p70S6 kinase activity and cell proliferation is regulated by Rap1GAP in thyroid cells (PMID:14660640)
- CF101 inhibits human colon carcinoma growth in mice via modulation of GSK3B. (PMID:14691449)
- GSK3B regulates the cytoskeleton and translocation of Rac1 in keratinocyte lamellipodia. (PMID:14729058)
- No association was detected between GSK3-beta -50 T/C SNP and the presence of bipolar illness. Homozygotes for the wild variant (T/T) showed an earlier age at onset than carriers of the mutant allele (F=5.53, d.f.=2,182, P=0.0047). (PMID:14729229)
Cross-species orthologs
7 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | gsk3ba | ENSDARG00000017803 |
| danio_rerio | gsk3bb | ENSDARG00000052468 |
| mus_musculus | Gsk3b | ENSMUSG00000022812 |
| rattus_norvegicus | Gsk3b | ENSRNOG00000002833 |
| drosophila_melanogaster | sgg | FBGN0003371 |
| drosophila_melanogaster | gskt | FBGN0046332 |
| caenorhabditis_elegans | gsk-3 | WBGENE00001746 |
Paralogs (1): GSK3A (ENSG00000105723)
Protein
Protein identifiers
Glycogen synthase kinase-3 beta — P49841 (reviewed: P49841)
Alternative names: Serine/threonine-protein kinase GSK3B
All UniProt accessions (41): P49841, A0A3B3ITW1, A0A7I2V2I5, A0A7I2V2K7, A0A7I2V2N4, A0A7I2V2T2, A0A7I2V2U4, A0A7I2V2V4, A0A7I2V2Y0, A0A7I2V3A4, A0A7I2V3D8, A0A7I2V3G9, A0A7I2V3J4, A0A7I2V3K8, A0A7I2V3N7, A0A7I2V3S5, A0A7I2V3T3, A0A7I2V3Z5, A0A7I2V432, A0A7I2V441, A0A7I2V4F3, A0A7I2V4G2, A0A7I2V4W7, A0A7I2V4X2, A0A7I2V4X3, A0A7I2V589, A0A7I2V5B5, A0A7I2V5G5, A0A7I2V5K9, A0A7I2V5M2, A0A7I2V5P4, A0A7I2V606, A0A7I2V626, A0A7I2V675, A0A7I2YQ81, A0A7I2YQB0, A0A7I2YQG6, A0A7I2YQK0, A0A7I2YQK2, A0A7I2YQU1, Q6FI27
UniProt curated annotations — full annotation on UniProt →
Function. Constitutively active protein kinase that acts as a negative regulator in the hormonal control of glucose homeostasis, Wnt signaling and regulation of transcription factors and microtubules, by phosphorylating and inactivating glycogen synthase (GYS1 or GYS2), EIF2B, CTNNB1/beta-catenin, APC, AXIN1, DPYSL2/CRMP2, JUN, NFATC1/NFATC, MAPT/TAU and MACF1. Requires primed phosphorylation of the majority of its substrates. In skeletal muscle, contributes to insulin regulation of glycogen synthesis by phosphorylating and inhibiting GYS1 activity and hence glycogen synthesis. May also mediate the development of insulin resistance by regulating activation of transcription factors. Regulates protein synthesis by controlling the activity of initiation factor 2B (EIF2BE/EIF2B5) in the same manner as glycogen synthase. In Wnt signaling, GSK3B forms a multimeric complex with APC, AXIN1 and CTNNB1/beta-catenin and phosphorylates the N-terminus of CTNNB1 leading to its degradation mediated by ubiquitin/proteasomes. Phosphorylates JUN at sites proximal to its DNA-binding domain, thereby reducing its affinity for DNA. Phosphorylates NFATC1/NFATC on conserved serine residues promoting NFATC1/NFATC nuclear export, shutting off NFATC1/NFATC gene regulation, and thereby opposing the action of calcineurin. Phosphorylates MAPT/TAU on ‘Thr-548’, decreasing significantly MAPT/TAU ability to bind and stabilize microtubules. MAPT/TAU is the principal component of neurofibrillary tangles in Alzheimer disease. Plays an important role in ERBB2-dependent stabilization of microtubules at the cell cortex. Phosphorylates MACF1, inhibiting its binding to microtubules which is critical for its role in bulge stem cell migration and skin wound repair. Probably regulates NF-kappa-B (NFKB1) at the transcriptional level and is required for the NF-kappa-B-mediated anti-apoptotic response to TNF (TNF/TNFA). Negatively regulates replication in pancreatic beta-cells, resulting in apoptosis, loss of beta-cells and diabetes. Through phosphorylation of the anti-apoptotic protein MCL1, may control cell apoptosis in response to growth factors deprivation. Phosphorylates MUC1 in breast cancer cells, decreasing the interaction of MUC1 with CTNNB1/beta-catenin. Is necessary for the establishment of neuronal polarity and axon outgrowth. Phosphorylates MARK2, leading to inhibition of its activity. Phosphorylates SIK1 at ‘Thr-182’, leading to sustainment of its activity. Phosphorylates ZC3HAV1 which enhances its antiviral activity. Phosphorylates SNAI1, leading to its ubiquitination and proteasomal degradation. Phosphorylates SFPQ at ‘Thr-687’ upon T-cell activation. Phosphorylates NR1D1 st ‘Ser-55’ and ‘Ser-59’ and stabilizes it by protecting it from proteasomal degradation. Regulates the circadian clock via phosphorylation of the major clock components including BMAL1, CLOCK and PER2. Phosphorylates FBXL2 at ‘Thr-404’ and primes it for ubiquitination by the SCF(FBXO3) complex and proteasomal degradation. Phosphorylates CLOCK AT ‘Ser-427’ and targets it for proteasomal degradation. Phosphorylates BMAL1 at ‘Ser-17’ and ‘Ser-21’ and primes it for ubiquitination and proteasomal degradation. Phosphorylates OGT at ‘Ser-3’ or ‘Ser-4’ which positively regulates its activity. Phosphorylates MYCN in neuroblastoma cells which may promote its degradation. Regulates the circadian rhythmicity of hippocampal long-term potentiation and BMAL1 and PER2 expression. Acts as a regulator of autophagy by mediating phosphorylation of KAT5/TIP60 under starvation conditions, activating KAT5/TIP60 acetyltransferase activity and promoting acetylation of key autophagy regulators, such as ULK1 and RUBCNL/Pacer. Negatively regulates extrinsic apoptotic signaling pathway via death domain receptors. Promotes the formation of an anti-apoptotic complex, made of DDX3X, BRIC2 and GSK3B, at death receptors, including TNFRSF10B. The anti-apoptotic function is most effective with weak apoptotic signals and can be overcome by stronger stimulation. Phosphorylates E2F1, promoting the interaction between E2F1 and USP11, stabilizing E2F1 and promoting its activity. Phosphorylates mTORC2 complex component RICTOR at ‘Ser-1235’ in response to endoplasmic stress, inhibiting mTORC2. Phosphorylates mTORC2 complex component RICTOR at ‘Thr-1695’ which facilitates FBXW7-mediated ubiquitination and subsequent degradation of RICTOR. Phosphorylates FXR1, promoting FXR1 ubiquitination by the SCF(FBXO4) complex and FXR1 degradation by the proteasome. Phosphorylates interleukin-22 receptor subunit IL22RA1, preventing its proteasomal degradation. Phosphorylates and inhibits the CTP synthase and protein-asparagine deamidase activities of CTPS1. Phosphorylates DSP at multiple sequential serine residues in the C-terminus tail, promoting its recruitment to developing desmosome cell-cell junctions.
Subunit / interactions. Monomer. Interacts with ARRB2, DISC1 and ZBED3. Interacts with CABYR, MMP2, MUC1, NIN and PRUNE1. Interacts with AXIN1; the interaction mediates hyperphosphorylation of CTNNB1 leading to its ubiquitination and destruction. Interacts with and phosphorylates SNAI1. Interacts with DNM1L (via a C-terminal domain). Found in a complex composed of MACF1, APC, AXIN1, CTNNB1 and GSK3B. Interacts with SGK3. Interacts with DAB2IP (via C2 domain); the interaction stimulates GSK3B kinase activation. Interacts (via C2 domain) with PPP2CA. Interacts with the CLOCK-BMAL1 heterodimer. Interacts with the BMAL1. Interacts with CTNND2. Interacts with NCYM. The complex composed, at least, of APC, CTNNB1 and GSK3B interacts with JPT1; the interaction requires the inactive form of GSK3B (phosphorylated at ‘Ser-9’). Forms a complex composed of PRKAR2A or PRKAR2B, GSK3B and GSKIP through GSKIP interaction; facilitates PKA-induced phosphorylation and regulates GSK3B activity. Interacts with GSKIP. Interacts with GID8. Interacts with PIWIL2. Interacts with LMBR1L. Interacts with DDX3X. Interacts with BIRC2. Interacts with TNFRSF10B; TNFRSF10B stimulation inhibits GSK3B kinase activity. Interacts with RICTOR; the interaction results in phosphorylation of RICTOR at ‘Thr-1695’ by GSK3B which facilitates FBXW7-mediated ubiquitination and subsequent degradation of RICTOR. Found in a complex with SLC39A6, SLC39A10 and with GSK3B that controls NCAM1 phosphorylation. Interacts with PKP3 (via ARM repeats); the interaction may be involved in PKP3 protein degradation.
Subcellular location. Cytoplasm. Nucleus. Cell membrane.
Tissue specificity. Expressed in testis, thymus, prostate and ovary and weakly expressed in lung, brain and kidney. Colocalizes with EIF2AK2/PKR and TAU in the Alzheimer disease (AD) brain.
Post-translational modifications. Phosphorylated by AKT1 and ILK1. Upon insulin-mediated signaling, the activated PKB/AKT1 protein kinase phosphorylates and deactivates GSK3B, resulting in the dephosphorylation and activation of GYS1. Activated by phosphorylation at Tyr-216. Inactivated by phosphorylation at Ser-9. Phosphorylated in a circadian manner in the hippocampus. Mono-ADP-ribosylation by PARP10 negatively regulates kinase activity. Palmitoylated. Palmitoylation by ZDHHC4 prevents AKT1-mediated phosphorylation.
Activity regulation. Activated by phosphorylation at Tyr-216. In response to insulin, inhibited by phosphorylation at Ser-9 by PKB/AKT1 and RPS6KA3; phosphorylation at this site causes a conformational change, preventing access of substrates to the active site. Inhibited by IL22 treatment which also triggers phosphorylation at Ser-9, promoting inactivation. Inhibited by lithium.
Miscellaneous. Higher expression and activity of GSK3B are found in the skeletal muscle (vastus lateralis) of patients with type 2 diabetes. Several potent GSK3 (GSK3A and GSK3B) inhibitors have been identified and characterized in preclinical models for treatments of type 2 diabetes. May play a specific role in axon growth and neurite outgrowth. Reduced binding to AXIN1, reduced ability to phosphorylate MAPT/TAU.
Similarity. Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. GSK-3 subfamily.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P49841-1 | 1, GSK-3beta1 | yes |
| P49841-2 | 2, GSK-3beta2, neuron-specific |
RefSeq proteins (3): NP_001139628, NP_001341525, NP_002084 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000719 | Prot_kinase_dom | Domain |
| IPR008271 | Ser/Thr_kinase_AS | Active_site |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR017441 | Protein_kinase_ATP_BS | Binding_site |
| IPR039192 | STKc_GSK3 | Domain |
| IPR050591 | GSK-3 | Family |
Pfam: PF00069
Enzyme classification (BRENDA):
- EC 2.7.11.26 — tau-protein kinase (BRENDA: 18 organisms, 200 substrates, 549 inhibitors, 0 Km, 0 kcat entries)
Catalyzed reactions (Rhea), 4 shown:
- L-seryl-[tau protein] + ATP = O-phospho-L-seryl-[tau protein] + ADP + H(+) (RHEA:12801)
- L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+) (RHEA:17989)
- L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+) (RHEA:46608)
- L-threonyl-[tau protein] + ATP = O-phospho-L-threonyl-[tau protein] + ADP + H(+) (RHEA:53904)
UniProt features (65 total): helix 19, strand 17, modified residue 5, mutagenesis site 5, turn 5, compositionally biased region 3, region of interest 2, sequence conflict 2, binding site 2, chain 1, domain 1, lipid moiety-binding region 1, splice variant 1, active site 1
Structure
Experimental structures (PDB)
122 structures, top 30 by resolution.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 9X2V | X-RAY DIFFRACTION | 1.39 |
| 1O6L | X-RAY DIFFRACTION | 1.6 |
| 9X2Q | X-RAY DIFFRACTION | 1.68 |
| 1O6K | X-RAY DIFFRACTION | 1.7 |
| 9X2X | X-RAY DIFFRACTION | 1.79 |
| 1J1B | X-RAY DIFFRACTION | 1.8 |
| 2JDO | X-RAY DIFFRACTION | 1.8 |
| 7SXJ | X-RAY DIFFRACTION | 1.85 |
| 3QKL | X-RAY DIFFRACTION | 1.9 |
| 9X2W | X-RAY DIFFRACTION | 1.92 |
| 2X39 | X-RAY DIFFRACTION | 1.93 |
| 1Q5K | X-RAY DIFFRACTION | 1.94 |
| 9X2Y | X-RAY DIFFRACTION | 1.96 |
| 4AFJ | X-RAY DIFFRACTION | 1.98 |
| 3CQW | X-RAY DIFFRACTION | 2 |
| 6Y9S | X-RAY DIFFRACTION | 2.03 |
| 4PTE | X-RAY DIFFRACTION | 2.03 |
| 7B6F | X-RAY DIFFRACTION | 2.05 |
| 9X2U | X-RAY DIFFRACTION | 2.07 |
| 6Y9R | X-RAY DIFFRACTION | 2.08 |
| 7SXH | X-RAY DIFFRACTION | 2.09 |
| 1J1C | X-RAY DIFFRACTION | 2.1 |
| 1Q41 | X-RAY DIFFRACTION | 2.1 |
| 2UW9 | X-RAY DIFFRACTION | 2.1 |
| 4NM3 | X-RAY DIFFRACTION | 2.1 |
| 9PE9 | X-RAY DIFFRACTION | 2.11 |
| 6NPZ | X-RAY DIFFRACTION | 2.12 |
| 6TCU | X-RAY DIFFRACTION | 2.14 |
| 8AV1 | X-RAY DIFFRACTION | 2.15 |
| 6V6L | X-RAY DIFFRACTION | 2.19 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P49841-F1 | 89.11 | 0.79 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 181 (proton acceptor)
Ligand- & substrate-binding residues (2): 62–70; 85
Post-translational modifications (6): 9, 216, 389, 390, 402, 14
Mutagenesis-validated functional residues (5):
| Position | Phenotype |
|---|---|
| 9 | loss of phosphorylation; abolished inhibition of activity, leading to constitutively active. |
| 14 | significantly reduced palmitoylation. |
| 85–86 | abolished serine/threonine-protein kinase activity. |
| 96 | prevents the phosphorylation of phosphate-primed glycogen synthase. |
| 128 | abolishes activity toward axin1. |
Function
Pathways and Gene Ontology
Reactome pathways
26 pathways
| ID | Pathway |
|---|---|
| R-HSA-195253 | Degradation of beta-catenin by the destruction complex |
| R-HSA-196299 | Beta-catenin phosphorylation cascade |
| R-HSA-198323 | AKT phosphorylates targets in the cytosol |
| R-HSA-3371453 | Regulation of HSF1-mediated heat shock response |
| R-HSA-399956 | CRMPs in Sema3A signaling |
| R-HSA-4641262 | Disassembly of the destruction complex and recruitment of AXIN to the membrane |
| R-HSA-5250924 | B-WICH complex positively regulates rRNA expression |
| R-HSA-5339716 | Signaling by GSK3beta mutants |
| R-HSA-5358747 | CTNNB1 S33 mutants aren’t phosphorylated |
| R-HSA-5358749 | CTNNB1 S37 mutants aren’t phosphorylated |
| R-HSA-5358751 | CTNNB1 S45 mutants aren’t phosphorylated |
| R-HSA-5358752 | CTNNB1 T41 mutants aren’t phosphorylated |
| R-HSA-5467337 | APC truncation mutants have impaired AXIN binding |
| R-HSA-5467340 | AXIN missense mutants destabilize the destruction complex |
| R-HSA-5467348 | Truncations of AMER1 destabilize the destruction complex |
| R-HSA-5610783 | Degradation of GLI2 by the proteasome |
| R-HSA-5610785 | GLI3 is processed to GLI3R by the proteasome |
| R-HSA-5674400 | Constitutive Signaling by AKT1 E17K in Cancer |
| R-HSA-69601 | Ubiquitin-Mediated Degradation of Phosphorylated Cdc25A |
| R-HSA-75815 | Ubiquitin-dependent degradation of Cyclin D |
| R-HSA-8939902 | Regulation of RUNX2 expression and activity |
| R-HSA-9683610 | Maturation of nucleoprotein |
| R-HSA-9694631 | Maturation of nucleoprotein |
| R-HSA-9762114 | GSK3B and BTRC:CUL1-mediated-degradation of NFE2L2 |
| R-HSA-9856649 | Transcriptional and post-translational regulation of MITF-M expression and activity |
| R-HSA-9929356 | GSK3B-mediated proteasomal degradation of PD-L1(CD274) |
MSigDB gene sets: 890 (showing top):
GOBP_CIRCADIAN_RHYTHM, GOBP_DENDRITE_DEVELOPMENT, GOBP_NEGATIVE_REGULATION_OF_PROTEIN_CONTAINING_COMPLEX_ASSEMBLY, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP, GOBP_POSITIVE_REGULATION_OF_PROTEIN_BINDING, GOBP_EPITHELIUM_DEVELOPMENT, GOBP_PROTEIN_LOCALIZATION_TO_CYTOSKELETON, GOBP_REGULATION_OF_AUTOPHAGY, GOBP_NEGATIVE_REGULATION_OF_CELL_DEVELOPMENT, GOBP_REGULATION_OF_PROTEASOMAL_UBIQUITIN_DEPENDENT_PROTEIN_CATABOLIC_PROCESS, GOBP_NEGATIVE_REGULATION_OF_NEURON_DIFFERENTIATION, GOBP_REGULATION_OF_PROTEIN_BINDING, MOOTHA_GLYCOGEN_METABOLISM, GOBP_POLYSACCHARIDE_BIOSYNTHETIC_PROCESS
GO Biological Process (106): epithelial to mesenchymal transition (GO:0001837), positive regulation of cell-matrix adhesion (GO:0001954), heart valve development (GO:0003170), glycogen metabolic process (GO:0005977), protein phosphorylation (GO:0006468), ER overload response (GO:0006983), mitochondrion organization (GO:0007005), circadian rhythm (GO:0007623), insulin receptor signaling pathway (GO:0008286), positive regulation of autophagy (GO:0010508), positive regulation of gene expression (GO:0010628), negative regulation of gene expression (GO:0010629), negative regulation of epithelial to mesenchymal transition (GO:0010719), regulation of neuron projection development (GO:0010975), Wnt signaling pathway (GO:0016055), peptidyl-serine phosphorylation (GO:0018105), viral protein processing (GO:0019082), hippocampus development (GO:0021766), establishment of cell polarity (GO:0030010), maintenance of cell polarity (GO:0030011), cell differentiation (GO:0030154), negative regulation of cell migration (GO:0030336), regulation of axon extension (GO:0030516), neuron projection development (GO:0031175), negative regulation of protein-containing complex assembly (GO:0031333), positive regulation of protein-containing complex assembly (GO:0031334), positive regulation of protein ubiquitination (GO:0031398), negative regulation of TOR signaling (GO:0032007), positive regulation of protein binding (GO:0032092), positive regulation of proteasomal ubiquitin-dependent protein catabolic process (GO:0032436), positive regulation of type I interferon production (GO:0032481), regulation of microtubule-based process (GO:0032886), response to endoplasmic reticulum stress (GO:0034976), intracellular signal transduction (GO:0035556), cellular response to interleukin-3 (GO:0036016), regulation of circadian rhythm (GO:0042752), negative regulation of apoptotic process (GO:0043066), proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161), positive regulation of neuron apoptotic process (GO:0043525), positive regulation of cell differentiation (GO:0045597)
GO Molecular Function (22): protease binding (GO:0002020), p53 binding (GO:0002039), protein kinase activity (GO:0004672), protein serine/threonine kinase activity (GO:0004674), ATP binding (GO:0005524), beta-catenin binding (GO:0008013), kinase activity (GO:0016301), protein kinase binding (GO:0019901), ubiquitin protein ligase binding (GO:0031625), protein kinase A catalytic subunit binding (GO:0034236), dynactin binding (GO:0034452), tau protein binding (GO:0048156), tau-protein kinase activity (GO:0050321), NF-kappaB binding (GO:0051059), RNA polymerase II-specific DNA-binding transcription factor binding (GO:0061629), scaffold protein binding (GO:0097110), protein serine kinase activity (GO:0106310), nucleotide binding (GO:0000166), MAP kinase activity (GO:0004707), protein binding (GO:0005515), transferase activity (GO:0016740), phosphatase binding (GO:0019902)
GO Cellular Component (20): nucleus (GO:0005634), nucleoplasm (GO:0005654), cytoplasm (GO:0005737), mitochondrion (GO:0005739), centrosome (GO:0005813), cytosol (GO:0005829), plasma membrane (GO:0005886), axon (GO:0030424), dendrite (GO:0030425), beta-catenin destruction complex (GO:0030877), presynapse (GO:0098793), postsynapse (GO:0098794), glutamatergic synapse (GO:0098978), Wnt signalosome (GO:1990909), early endosome (GO:0005769), late endosome (GO:0005770), Golgi apparatus (GO:0005794), caveola (GO:0005901), focal adhesion (GO:0005925), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-16 pathways:
| Category | Pathways |
|---|---|
| Signaling by CTNNB1 phospho-site mutants | 4 |
| Hedgehog ‘off’ state | 2 |
| Signaling by WNT | 1 |
| Degradation of beta-catenin by the destruction complex | 1 |
| PIP3 activates AKT signaling | 1 |
| Cellular response to heat stress | 1 |
| Semaphorin interactions | 1 |
| TCF dependent signaling in response to WNT | 1 |
| Positive epigenetic regulation of rRNA expression | 1 |
| Signaling by WNT in cancer | 1 |
| Signaling by APC mutants | 1 |
| Signaling by AXIN mutants | 1 |
| Signaling by AMER1 mutants | 1 |
| PI3K/AKT Signaling in Cancer | 1 |
| p53-Independent G1/S DNA Damage Checkpoint | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 6 |
| protein binding | 3 |
| intracellular membrane-bounded organelle | 3 |
| cytoplasm | 3 |
| synapse | 3 |
| anatomical structure development | 2 |
| gene expression | 2 |
| regulation of gene expression | 2 |
| establishment or maintenance of cell polarity | 2 |
| protein kinase activity | 2 |
| cytoskeletal protein binding | 2 |
| protein serine/threonine kinase activity | 2 |
| neuron projection | 2 |
| endosome | 2 |
| mesenchymal cell differentiation | 1 |
| regulation of cell-matrix adhesion | 1 |
| cell-matrix adhesion | 1 |
| positive regulation of cell-substrate adhesion | 1 |
| heart development | 1 |
| energy reserve metabolic process | 1 |
| glucan metabolic process | 1 |
| phosphorylation | 1 |
| protein modification process | 1 |
| ER-nucleus signaling pathway | 1 |
| response to endoplasmic reticulum stress | 1 |
| cellular response to biotic stimulus | 1 |
| organelle organization | 1 |
| rhythmic process | 1 |
| cell surface receptor protein tyrosine kinase signaling pathway | 1 |
| cellular response to insulin stimulus | 1 |
| autophagy | 1 |
| positive regulation of catabolic process | 1 |
| regulation of autophagy | 1 |
| positive regulation of macromolecule biosynthetic process | 1 |
| negative regulation of macromolecule biosynthetic process | 1 |
| epithelial to mesenchymal transition | 1 |
| regulation of epithelial to mesenchymal transition | 1 |
| negative regulation of cell differentiation | 1 |
| negative regulation of multicellular organismal process | 1 |
| neuron projection development | 1 |
Protein interactions and networks
STRING
8184 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| GSK3B | AXIN1 | O15169 | 999 |
| GSK3B | CTNNB1 | P35222 | 999 |
| GSK3B | APC | P25054 | 997 |
| GSK3B | AXIN2 | Q9Y2T1 | 997 |
| GSK3B | CSNK1A1 | P48729 | 996 |
| GSK3B | BTRC | Q9Y297 | 996 |
| GSK3B | DVL1 | O14640 | 995 |
| GSK3B | CHKA | P35790 | 981 |
| GSK3B | TP53 | P04637 | 981 |
| GSK3B | FRAT1 | Q92837 | 979 |
| GSK3B | AMER1 | Q5JTC6 | 969 |
| GSK3B | DISC1 | Q9NRI5 | 969 |
| GSK3B | TCHP | Q9BT92 | 966 |
| GSK3B | LRP6 | O75581 | 955 |
| GSK3B | MAPT | P10636 | 943 |
IntAct
479 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| AXIN1 | GSK3B | psi-mi:“MI:0407”(direct interaction) | 0.980 |
| GSK3B | AXIN1 | psi-mi:“MI:0217”(phosphorylation reaction) | 0.980 |
| AXIN1 | GSK3B | psi-mi:“MI:0217”(phosphorylation reaction) | 0.980 |
| AXIN1 | GSK3B | psi-mi:“MI:0915”(physical association) | 0.980 |
| GSK3B | AXIN1 | psi-mi:“MI:0915”(physical association) | 0.980 |
| AXIN1 | GSK3B | psi-mi:“MI:0403”(colocalization) | 0.980 |
| GSK3B | AXIN1 | psi-mi:“MI:0914”(association) | 0.980 |
| GSK3B | CTNNB1 | psi-mi:“MI:0915”(physical association) | 0.950 |
| GSK3B | CTNNB1 | psi-mi:“MI:0217”(phosphorylation reaction) | 0.950 |
| CTNNB1 | GSK3B | psi-mi:“MI:0217”(phosphorylation reaction) | 0.950 |
| CTNNB1 | AXIN1 | psi-mi:“MI:0914”(association) | 0.940 |
| AXIN1 | CTNNB1 | psi-mi:“MI:0914”(association) | 0.940 |
| AKT1 | GSK3B | psi-mi:“MI:0407”(direct interaction) | 0.830 |
| AKT1 | GSK3B | psi-mi:“MI:0914”(association) | 0.830 |
| FRAT1 | GSK3B | psi-mi:“MI:0407”(direct interaction) | 0.810 |
| GSK3A | AXIN1 | psi-mi:“MI:0914”(association) | 0.800 |
| PPP1CB | CCDC85C | psi-mi:“MI:0914”(association) | 0.750 |
| TRAF2 | HTRA2 | psi-mi:“MI:0914”(association) | 0.750 |
| GSK3B | GYS1 | psi-mi:“MI:0217”(phosphorylation reaction) | 0.730 |
| CFTR | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.710 |
BioGRID (1387): GSK3B (Biochemical Activity), GSK3B (Biochemical Activity), HDAC4 (Biochemical Activity), JUN (Biochemical Activity), GSK3B (Biochemical Activity), MAPT (Biochemical Activity), GSK3B (Affinity Capture-Western), GSK3B (Affinity Capture-Western), MAP3K4 (Biochemical Activity), GSK3B (Biochemical Activity), RICTOR (Biochemical Activity), MAPT (Biochemical Activity), KLF5 (Biochemical Activity), MAPT (Biochemical Activity), MAPT (Biochemical Activity)
ESM2 similar proteins: A0A8I3S724, A4IGM9, A4IIW7, A5GFW1, B0VXL7, B6A7Q3, C0RW22, D7UQM5, F4I4F2, O08605, O14965, O35495, O55099, O59790, O70126, O80673, O94921, P18266, P27466, P49841, P59241, P97477, Q00771, Q0VD22, Q13555, Q16566, Q2TA06, Q501Q9, Q58D94, Q5XIT0, Q66JF3, Q6BVA0, Q6C3J2, Q6CWQ4, Q6DE08, Q6DGS3, Q6GPL3, Q6Z8C8, Q755C4, Q7YRC6
Diamond homologs: A2X6X1, A2XFC8, A2XUW1, A2YCH5, A8WIP6, B0Y8W7, B3WFY8, G4N0Z0, G4NH08, G5EFV5, O04160, O23145, O42376, O42781, O80345, P16892, P18266, P20793, P20794, P21127, P23573, P24788, P27638, P38615, P39073, P43288, P43289, P43294, P46892, P47812, P49841, P51136, P51137, P51138, P51139, P54665, P54666, Q00532, Q00859, Q03957
SIGNOR signaling
200 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| GSK3B | “down-regulates activity” | NOTCH2 | phosphorylation |
| GSK3B | “down-regulates activity” | HNRNPD | phosphorylation |
| RPS6KA1 | down-regulates | GSK3B | phosphorylation |
| GSK3B | down-regulates | HNRNPD | phosphorylation |
| GSK3B | “down-regulates activity” | CTNNB1 | phosphorylation |
| GSK3B | down-regulates | CCNE1 | phosphorylation |
| GSK3B | “down-regulates quantity by destabilization” | MYC | phosphorylation |
| CDC42 | down-regulates | GSK3B | binding |
| PRKCZ | down-regulates | GSK3B | phosphorylation |
| STK11 | down-regulates | GSK3B | |
| GSK3B | down-regulates | NACA | phosphorylation |
| GSK3B | down-regulates | SNAI1 | phosphorylation |
| GSK3B | up-regulates | BAX | phosphorylation |
| MAPK1 | down-regulates | GSK3B | phosphorylation |
| MAPK3 | down-regulates | GSK3B | phosphorylation |
| GSK3B | up-regulates | ESR1 | phosphorylation |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 144 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Downregulation of TGF-beta receptor signaling | 5 | 21.5× | 9e-04 |
| Transcriptional regulation by RUNX2 | 6 | 16.0× | 8e-04 |
| DDX58/IFIH1-mediated induction of interferon-alpha/beta | 5 | 13.4× | 4e-03 |
| Toll Like Receptor 3 (TLR3) Cascade | 5 | 10.2× | 8e-03 |
| mRNA Polyadenylation | 11 | 10.2× | 8e-06 |
| TRIF (TICAM1)-mediated TLR4 signaling | 5 | 10.0× | 8e-03 |
| MyD88-independent TLR4 cascade | 5 | 9.7× | 8e-03 |
| Activation of NMDA receptors and postsynaptic events | 5 | 9.7× | 8e-03 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| canonical NF-kappaB signal transduction | 5 | 15.7× | 4e-03 |
| circadian regulation of gene expression | 6 | 12.0× | 3e-03 |
| MAPK cascade | 8 | 10.5× | 7e-04 |
| cellular response to tumor necrosis factor | 7 | 9.8× | 3e-03 |
| protein phosphorylation | 9 | 5.2× | 9e-03 |
| DNA damage response | 10 | 4.6× | 9e-03 |
Disease & clinical
Cancer significance
From intOGen — cancer-driver classification: loss-of-function (tumor-suppressor-like) across 1 cancer types — STAD.
Clinical variants and AI predictions
ClinVar
76 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 2 |
| Likely pathogenic | 1 |
| Uncertain significance | 32 |
| Likely benign | 2 |
| Benign | 22 |
Top pathogenic / likely-pathogenic (3)
| Variant ID | HGVS | Classification |
|---|---|---|
| 3897594 | NM_001146156.2(GSK3B):c.472_473dup (p.Lys159fs) | Pathogenic |
| 4267536 | NM_001146156.2(GSK3B):c.499C>T (p.Arg167Ter) | Pathogenic |
| 4057156 | NM_001146156.2(GSK3B):c.916C>T (p.Arg306Ter) | Likely pathogenic |
SpliceAI
4260 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 3:119843349:CAGTT:C | acceptor_gain | 1.0000 |
| 3:119843351:GTT:G | acceptor_gain | 1.0000 |
| 3:119843352:TT:T | acceptor_gain | 1.0000 |
| 3:119843353:TCTAT:T | acceptor_loss | 1.0000 |
| 3:119843354:C:CC | acceptor_gain | 1.0000 |
| 3:119843354:CTATA:C | acceptor_loss | 1.0000 |
| 3:119843355:T:C | acceptor_loss | 1.0000 |
| 3:119863414:GTTAC:G | donor_loss | 1.0000 |
| 3:119863415:TTAC:T | donor_loss | 1.0000 |
| 3:119863416:TAC:T | donor_loss | 1.0000 |
| 3:119863417:ACCTT:A | donor_loss | 1.0000 |
| 3:119863418:C:CT | donor_loss | 1.0000 |
| 3:119863601:AAGAC:A | acceptor_gain | 1.0000 |
| 3:119863602:AGAC:A | acceptor_gain | 1.0000 |
| 3:119863603:GAC:G | acceptor_gain | 1.0000 |
| 3:119863604:AC:A | acceptor_gain | 1.0000 |
| 3:119863605:CC:C | acceptor_gain | 1.0000 |
| 3:119863606:C:CA | acceptor_loss | 1.0000 |
| 3:119863606:C:CC | acceptor_gain | 1.0000 |
| 3:119863606:C:T | acceptor_gain | 1.0000 |
| 3:119863609:CAG:C | acceptor_gain | 1.0000 |
| 3:119863610:A:T | acceptor_gain | 1.0000 |
| 3:119863611:G:C | acceptor_gain | 1.0000 |
| 3:119863611:G:GC | acceptor_gain | 1.0000 |
| 3:119863614:C:CT | acceptor_gain | 1.0000 |
| 3:119863615:A:T | acceptor_gain | 1.0000 |
| 3:119866691:C:CT | acceptor_gain | 1.0000 |
| 3:119866691:C:T | acceptor_gain | 1.0000 |
| 3:119866692:A:T | acceptor_gain | 1.0000 |
| 3:119866694:C:CT | acceptor_gain | 1.0000 |
AlphaMissense
2700 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 3:119863548:A:C | Y323D | 1.000 |
| 3:119863548:A:G | Y323H | 1.000 |
| 3:119863553:A:G | L321P | 1.000 |
| 3:119863568:A:G | L316P | 1.000 |
| 3:119876421:A:G | W301R | 1.000 |
| 3:119876421:A:T | W301R | 1.000 |
| 3:119876435:A:C | I296S | 1.000 |
| 3:119876435:A:G | I296T | 1.000 |
| 3:119876435:A:T | I296N | 1.000 |
| 3:119876442:G:A | P294S | 1.000 |
| 3:119876443:G:C | F293L | 1.000 |
| 3:119876443:G:T | F293L | 1.000 |
| 3:119876444:A:C | F293C | 1.000 |
| 3:119876444:A:G | F293S | 1.000 |
| 3:119876445:A:G | F293L | 1.000 |
| 3:119876449:A:C | F291L | 1.000 |
| 3:119876449:A:T | F291L | 1.000 |
| 3:119876451:A:G | F291L | 1.000 |
| 3:119876467:G:C | N285K | 1.000 |
| 3:119876467:G:T | N285K | 1.000 |
| 3:119876469:T:C | N285D | 1.000 |
| 3:119876470:C:A | M284I | 1.000 |
| 3:119876470:C:G | M284I | 1.000 |
| 3:119876470:C:T | M284I | 1.000 |
| 3:119876471:A:C | M284R | 1.000 |
| 3:119876471:A:G | M284T | 1.000 |
| 3:119876471:A:T | M284K | 1.000 |
| 3:119876480:A:T | I281N | 1.000 |
| 3:119876495:G:C | P276R | 1.000 |
| 3:119876495:G:T | P276Q | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000011870 (3:119985952 C>A), RS1000014717 (3:120083089 G>C), RS1000016683 (3:119859106 G>A), RS1000020021 (3:119954918 C>T), RS1000026929 (3:120040637 G>A), RS1000028023 (3:119992241 C>T), RS1000035422 (3:120040385 T>C), RS1000051976 (3:119856443 A>G), RS1000055379 (3:120080528 G>A,C), RS1000063761 (3:119996786 G>A), RS1000066786 (3:120068756 G>A), RS1000072807 (3:120089140 GAGA>G), RS1000098147 (3:120033819 A>C), RS1000105906 (3:119843790 T>C), RS1000106464 (3:119866326 C>T)
Disease associations
OMIM: gene MIM:605004 | disease phenotypes:
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| neurodevelopmental disorder | Definitive | Autosomal dominant |
Mondo (3): dilated cardiomyopathy (MONDO:0005021), intellectual disability (MONDO:0001071), neurodevelopmental disorder (MONDO:0700092)
Orphanet (2): Dilated cardiomyopathy (Orphanet:217604), NON RARE IN EUROPE: Unexplained intellectual disability (Orphanet:319658)
HPO phenotypes
1 total (1 of 1 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0001644 | Dilated cardiomyopathy |
GWAS associations
8 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002223_34 | HDL cholesterol | 1.000000e-08 |
| GCST004232_80 | HDL cholesterol levels | 4.000000e-08 |
| GCST006993_4 | Hippocampal volume in Alzheimer’s disease dementia | 1.000000e-07 |
| GCST010204_36 | Low density lipoprotein cholesterol levels | 1.000000e-08 |
| GCST90002398_129 | Neutrophil count | 3.000000e-11 |
| GCST90002401_121 | Platelet distribution width | 5.000000e-15 |
| GCST90011900_23 | Serum alkaline phosphatase levels | 1.000000e-12 |
| GCST90013406_224 | Liver enzyme levels (alkaline phosphatase) | 2.000000e-19 |
EFO canonical traits (6, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004612 | high density lipoprotein cholesterol measurement |
| EFO:0005035 | hippocampal volume |
| EFO:0004611 | low density lipoprotein cholesterol measurement |
| EFO:0004833 | neutrophil count |
| EFO:0007984 | platelet component distribution width |
| EFO:0004533 | alkaline phosphatase measurement |
MeSH disease descriptors (3)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D002311 | Cardiomyopathy, Dilated | C14.280.195.160; C14.280.238.070; C16.320.488.750 |
| D008607 | Intellectual Disability | C10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539 |
| D065886 | Neurodevelopmental Disorders | F03.625 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (5): CHEMBL2095188 (PROTEIN FAMILY), CHEMBL262 (SINGLE PROTEIN), CHEMBL3883309 (PROTEIN-PROTEIN INTERACTION), CHEMBL6177905 (PROTEIN-PROTEIN INTERACTION), CHEMBL6195601 (PROTEIN-PROTEIN INTERACTION)
Molecules with ChEMBL bioactivity
67 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 445,201 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1336 | SORAFENIB | 4 | 86,060 |
| CHEMBL1448 | NICLOSAMIDE | 4 | 14,322 |
| CHEMBL189963 | PALBOCICLIB | 4 | 13,102 |
| CHEMBL3301610 | ABEMACICLIB | 4 | 7,045 |
| CHEMBL3301612 | ENCORAFENIB | 4 | 4,624 |
| CHEMBL502835 | NINTEDANIB | 4 | 8,545 |
| CHEMBL56337 | EPALRESTAT | 4 | 110 |
| CHEMBL608533 | MIDOSTAURIN | 4 | 7,259 |
| CHEMBL3318007 | PIMODIVIR | 3 | 144 |
| CHEMBL428690 | ALVOCIDIB | 3 | 27,781 |
| CHEMBL50 | QUERCETIN | 3 | 74,559 |
| CHEMBL85398 | THIAZOLIDINEDIONE | 3 | 54,290 |
| CHEMBL140 | CURCUMIN | 3 | 93,882 |
| CHEMBL2103840 | DINACICLIB | 3 | 2,257 |
| CHEMBL297453 | EPIGALOCATECHIN GALLATE | 3 | 22,804 |
| CHEMBL300138 | ENZASTAURIN | 3 | 3,209 |
| CHEMBL3137331 | DEFACTINIB | 3 | 1,229 |
| CHEMBL4297639 | LORECIVIVINT | 3 | 282 |
| CHEMBL449317 | HESPERIDIN | 3 | 18,753 |
| CHEMBL522892 | DOVITINIB | 3 | 4,944 |
| CHEMBL603469 | LESTAURTINIB | 3 | |
| CHEMBL91829 | RUBOXISTAURIN | 3 | |
| CHEMBL1276127 | INDIRUBIN | 2 | |
| CHEMBL14762 | SELICICLIB | 2 | |
| CHEMBL151 | LUTEOLIN | 2 | |
| CHEMBL31574 | FISETIN | 2 | |
| CHEMBL103667 | DORAMAPIMOD | 2 | |
| CHEMBL1230165 | SILMITASERTIB | 2 | |
| CHEMBL1614713 | CC-401 | 2 | |
| CHEMBL1944698 | ZOTIRACICLIB | 2 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB clinical annotations
3 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs334558 | Efficacy | 3 | citalopram;fluoxetine | Major Depressive Disorder |
| rs334558 | Efficacy | 3 | lithium | Bipolar Disorder |
| rs6438552 | Efficacy | 3 | lithium | Bipolar Disorder |
PharmGKB variants
4 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs334558 | GSK3B | 3 | 2.50 | 2 | citalopram;fluoxetine;lithium |
| rs3755557 | GSK3B | 0.00 | 0 | ||
| rs6438552 | GSK3B | 3 | 1.25 | 1 | lithium |
| rs3732361 | GSK3B | 0.00 | 0 |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — GSK subfamily
Most potent curated ligand interactions (44 total), top 25:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| CHIR-98014 | Inhibition | 9.24 | pIC50 |
| alsterpaullone 2-cyanoethyl | Inhibition | 9.1 | pIC50 |
| LY2090314 | Inhibition | 8.96 | pIC50 |
| GSK-3β inhibitor 3 [PMID: 25845281] | Inhibition | 8.96 | pIC50 |
| RGB-286638 | Inhibition | 8.52 | pIC50 |
| alsterpaullone | Inhibition | 8.4 | pIC50 |
| AZD2858 | Inhibition | 8.31 | pKi |
| GSK-3 inhibitor IX | Inhibition | 8.3 | pIC50 |
| laduviglusib | Inhibition | 8.17 | pIC50 |
| SB 216763 | Inhibition | 8.05 | pIC50 |
| GSK-3 inhibitor X | Inhibition | 8.0 | pIC50 |
| GNF4877 | Inhibition | 7.8 | pIC50 |
| compound 2 [PMID: 22560567] | Inhibition | 7.76 | pIC50 |
| 1-azakenpaullone | Inhibition | 7.74 | pIC50 |
| GSK-3 inhibitor XIII | Inhibition | 7.66 | pKi |
| indirubin-3’-monoxime | Inhibition | 7.66 | pIC50 |
| kenpaullone | Inhibition | 7.64 | pIC50 |
| GSK-3beta inhibitor XI | Inhibition | 7.6 | pKi |
| compound 52 [PMID: 9677190] | Inhibition | 7.52 | pIC50 |
| TWS119 | Inhibition | 7.52 | pIC50 |
| AZD1080 | Inhibition | 7.51 | pKi |
| GSK-3beta inhibitor VIII | Inhibition | 7.42 | pKi |
| SB-415286 | Inhibition | 7.42 | pIC50 |
| tideglusib | Irreversible inhibition | 7.3 | pKi |
| IM-12 | Inhibition | 7.28 | pIC50 |
Binding affinities (BindingDB)
1666 measured of 3416 human assays (3482 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| 4-amino-2,6-diphenyl-5-pyrimidinecarbonitrile | EC50 | 0.00117 nM | |
| 4-(4-fluorophenyl)-3,7,7-trimethyl-1,4,6,7,8,9-hexahydro-5H-pyrazolo[3,4-b]quinolin-5-one | EC50 | 0.0476 nM | |
| 3-amino-N-[4-(4-aminopiperidin-1-yl)-3-pyridinyl]-6-(2-fluorophenyl)pyrazine-2-carboxamide | IC50 | 0.1 nM | US-9452998: Protein kinase C inhibitors and methods of their use |
| 3-amino-N-[4-(4-aminopiperidin-1-yl)-3-pyridinyl]-6-phenylpyrazine-2-carboxamide | IC50 | 0.2 nM | US-9452998: Protein kinase C inhibitors and methods of their use |
| 3-amino-N-[4-(4-aminopiperidin-1-yl)-3-pyridinyl]-6-(4-methoxyphenyl)pyrazine-2-carboxamide | IC50 | 0.2 nM | US-9452998: Protein kinase C inhibitors and methods of their use |
| 3-amino-6-(2-fluorophenyl)-N-(4-piperazin-1-yl-3-pyridinyl)pyrazine-2-carboxamide | IC50 | 0.2 nM | US-9452998: Protein kinase C inhibitors and methods of their use |
| BDBM50375663 | IC50 | 0.23 nM | |
| N-(2-cycloheptyl-6-methylpyrimidin-4-yl)-5-fluoro-2H-pyrazolo[3,4-b]pyridin-3-amine | IC50 | 0.3 nM | US-8664219: Aminopyrimidines useful as inhibitors of protein kinases |
| 1-[2-(4-methylphenyl)-5-tert-butyl-pyrazol-3-yl]-3-[4-(2-morpholin-4-ylethoxy)naphthalen-1-yl]urea | KD | 0.37 nM | |
| 4,7,7-trimethyl-4-phenyl-3-(trifluoromethyl)-2,4,6,7,8,9-hexahydro-5H-pyrazolo[3,4-b]quinolin-5-one (BRD1652) | IC50 | 0.4 nM | |
| N-[6-(1-methylpyrazol-4-yl)isoquinolin-3-yl]-2-piperazin-1-ylpyridine-4-carboxamide | EC50 | 0.4 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| N-[6-(1-methyltriazol-4-yl)isoquinolin-3-yl]piperidine-4-carboxamide | EC50 | 0.4 nM | US-10287267: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| N-(2-cyclohexyl-6-methylpyrimidin-4-yl)-5-fluoro-2H-pyrazolo[3,4-b]pyridin-3-amine | IC50 | 0.5 nM | US-8664219: Aminopyrimidines useful as inhibitors of protein kinases |
| N-(4,5-dimethyl-6-phenyl-2-pyridinyl)-5-fluoro-2H-pyrazolo[3,4-b]pyridin-3-amine | IC50 | 0.6 nM | US-8735593: Aminopyridines useful as inhibitors of protein kinases |
| N-[6-(3-methylimidazol-4-yl)isoquinolin-3-yl]-2-(4-propan-2-ylpiperazin-1-yl)pyridine-4-carboxamide | EC50 | 0.6 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 1-(2-hydroxyethyl)-N-[6-(1-methylpyrazol-4-yl)isoquinolin-3-yl]piperidine-4-carboxamide | EC50 | 0.6 nM | US-10287267: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| N-(2-cyclohexyl-5,6-dimethylpyrimidin-4-yl)-5-fluoro-2H-pyrazolo[3,4-b]pyridin-3-amine | IC50 | 0.7 nM | US-8664219: Aminopyrimidines useful as inhibitors of protein kinases |
| 2-(7-methyl-2,7-diazaspiro[3.5]nonan-2-yl)-N-[6-(1-methylpyrazol-4-yl)isoquinolin-3-yl]pyridine-4-carboxamide | EC50 | 0.7 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 2-(4-methylpiperazin-1-yl)-N-[6-(1,3,4-thiadiazol-2-yl)isoquinolin-3-yl]pyridine-4-carboxamide | EC50 | 0.7 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 2-(4-methylpiperazin-1-yl)-N-[6-(1H-pyrazol-4-yl)isoquinolin-3-yl]pyridine-4-carboxamide | EC50 | 0.8 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 2-(2,7-diazaspiro[3.5]nonan-2-yl)-N-[6-(3-methylimidazol-4-yl)isoquinolin-3-yl]pyridine-4-carboxamide | EC50 | 0.8 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 2-methyl-N-[6-(3-methylimidazol-4-yl)isoquinolin-3-yl]-1,3-dihydroisoindole-5-carboxamide | EC50 | 0.8 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 6-(4-methylpiperazin-1-yl)-N-[6-(1,3,4-thiadiazol-2-yl)isoquinolin-3-yl]pyridine-3-carboxamide | EC50 | 0.8 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 4-methoxy-N-[6-(3-methylimidazol-4-yl)isoquinolin-3-yl]cyclohexane-1-carboxamide | EC50 | 0.8 nM | US-10287267: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 3-(4-methylpiperazin-1-yl)-N-[6-(1-methylpyrazol-4-yl)isoquinolin-3-yl]benzamide | EC50 | 0.9 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 4-(1-methylpiperidin-4-yl)oxy-N-[6-(1-methylpyrazol-4-yl)isoquinolin-3-yl]benzamide | EC50 | 0.9 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 6-(4-methylpiperazin-1-yl)-N-[6-(1-methylpyrazol-4-yl)isoquinolin-3-yl]pyridine-3-carboxamide | EC50 | 0.9 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| N-[6-(3-methylimidazol-4-yl)isoquinolin-3-yl]-2-(4-methylpiperazin-1-yl)pyridine-4-carboxamide | EC50 | 0.9 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 3-(1-methylpiperidin-4-yl)oxy-N-[6-(1,3-oxazol-5-yl)isoquinolin-3-yl]benzamide | EC50 | 0.9 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 4-(1-methylpiperidin-4-yl)oxy-N-[6-(1,3,4-thiadiazol-2-yl)isoquinolin-3-yl]benzamide | EC50 | 0.9 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| N-[6-(1-methylpyrazol-4-yl)isoquinolin-3-yl]-1-(3,3,3-trifluoropropyl)piperidine-4-carboxamide | EC50 | 0.9 nM | US-10287267: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 4-(hydroxymethyl)-N-[6-(3-methylimidazol-4-yl)isoquinolin-3-yl]cyclohexane-1-carboxamide | EC50 | 0.9 nM | US-10287267: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 4-(dimethylamino)-N-[6-(1,3-thiazol-5-yl)isoquinolin-3-yl]cyclohexane-1-carboxamide | EC50 | 0.9 nM | US-10287267: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 1-(2-pyrrolidin-1-ylacetyl)-N-[6-(1,3-thiazol-5-yl)isoquinolin-3-yl]piperidine-4-carboxamide | EC50 | 0.9 nM | US-10287267: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| N-[6-(4,4-difluorocyclohexyl)-2-methylpyrimidin-4-yl]-5-fluoro-2H-pyrazolo[3,4-b]pyridin-3-amine | IC50 | 1 nM | US-8664219: Aminopyrimidines useful as inhibitors of protein kinases |
| 5-fluoro-N-[6-methyl-2-[(1S,2S)-2-methylcyclohexyl]pyrimidin-4-yl]-2H-pyrazolo[3,4-b]pyridin-3-amine | IC50 | 1 nM | US-8664219: Aminopyrimidines useful as inhibitors of protein kinases |
| 3-amino-N-[2-(4-aminopiperidin-1-yl)phenyl]-6-phenylpyrazine-2-carboxamide | IC50 | 1 nM | US-9452998: Protein kinase C inhibitors and methods of their use |
| 2-(4-methylpiperazin-1-yl)-N-[6-(1-methylpyrazol-4-yl)isoquinolin-3-yl]pyridine-4-carboxamide | EC50 | 1 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 2-(2,7-diazaspiro[3.5]nonan-2-yl)-N-[6-(1-methylpyrazol-4-yl)isoquinolin-3-yl]pyridine-4-carboxamide | EC50 | 1 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 6-(4-methylpiperazin-1-yl)-N-[6-(1,3-thiazol-5-yl)isoquinolin-3-yl]pyridine-3-carboxamide | EC50 | 1 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 2-(4-methylpiperazin-1-yl)-N-[6-(1,3-thiazol-5-yl)isoquinolin-3-yl]pyridine-4-carboxamide | EC50 | 1 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 2-cyano-N-[6-(3-methylimidazol-4-yl)isoquinolin-3-yl]pyridine-4-carboxamide | EC50 | 1 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| erk000537 | KI | 1 nM | |
| erk000526 | KI | 1 nM | |
| 4-[(3-fluoroazetidin-1-yl)methyl]-N-[6-(1,3-thiazol-5-yl)isoquinolin-3-yl]cyclohexane-1-carboxamide | EC50 | 1 nM | US-10287267: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 1-(oxetan-3-yl)-N-[6-(1,3-thiazol-5-yl)isoquinolin-3-yl]piperidine-4-carboxamide | EC50 | 1 nM | US-10287267: Isoquinolin-3-yl carboxamides and preparation and use thereof |
| 4-[(4-{pyrazolo[1,5-a]pyridazin-3-yl}pyrimidin-2-yl)amino]benzonitrile | IC50 | 1 nM | |
| N-(3,4-dichlorophenyl)-4-{pyrazolo[1,5-a]pyridazin-3-yl}pyrimidin-2-amine | IC50 | 1 nM | |
| N-(3,5-difluorophenyl)-4-{pyrazolo[1,5-a]pyridazin-3-yl}pyrimidin-2-amine | IC50 | 1 nM | |
| 3-(1-methylpiperidin-4-yl)oxy-N-[6-(1-methylpyrazol-4-yl)isoquinolin-3-yl]benzamide | EC50 | 1.1 nM | US-9951048: Isoquinolin-3-yl carboxamides and preparation and use thereof |
ChEMBL bioactivities
6100 potent at pChembl≥5 of 6100 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 10.89 | IC50 | 0.013 | nM | CHEMBL2386094 |
| 10.34 | Kd | 0.046 | nM | CHEMBL4647659 |
| 10.30 | Kd | 0.05 | nM | CHEMBL1232189 |
| 10.28 | Kd | 0.053 | nM | CHEMBL1082152 |
| 10.22 | IC50 | 0.06 | nM | CHEMBL5290966 |
| 10.22 | IC50 | 0.06 | nM | CHEMBL1080901 |
| 10.15 | IC50 | 0.07 | nM | CHEMBL5409061 |
| 10.05 | Ki | 0.09 | nM | CHEMBL461262 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL3895998 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL4084855 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL5268011 |
| 9.85 | IC50 | 0.14 | nM | CHEMBL564450 |
| 9.82 | IC50 | 0.15 | nM | CHEMBL5278104 |
| 9.82 | IC50 | 0.15 | nM | CHEMBL5404581 |
| 9.82 | IC50 | 0.15 | nM | CHEMBL5413819 |
| 9.80 | IC50 | 0.16 | nM | CHEMBL5284020 |
| 9.74 | IC50 | 0.18 | nM | CHEMBL5418606 |
| 9.72 | IC50 | 0.19 | nM | CHEMBL5282887 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL2386090 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL3963605 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL3942619 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL3957649 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL4077376 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL4063206 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL5270781 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL5437994 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL5416472 |
| 9.66 | Ki | 0.22 | nM | CHEMBL2177173 |
| 9.66 | IC50 | 0.22 | nM | CHEMBL6176880 |
| 9.64 | IC50 | 0.23 | nM | CHEMBL3091542 |
| 9.64 | IC50 | 0.23 | nM | CHEMBL491647 |
| 9.62 | IC50 | 0.24 | nM | CHEMBL5440672 |
| 9.62 | IC50 | 0.24 | nM | CHEMBL6173985 |
| 9.62 | IC50 | 0.24 | nM | CHEMBL6177593 |
| 9.60 | IC50 | 0.25 | nM | CHEMBL4076186 |
| 9.60 | IC50 | 0.25 | nM | CHEMBL5283410 |
| 9.60 | IC50 | 0.25 | nM | CHEMBL5414726 |
| 9.60 | IC50 | 0.25 | nM | CHEMBL5407971 |
| 9.60 | IC50 | 0.25 | nM | CHEMBL5421040 |
| 9.59 | IC50 | 0.26 | nM | CHEMBL6175910 |
| 9.59 | IC50 | 0.26 | nM | CHEMBL6177214 |
| 9.57 | IC50 | 0.27 | nM | CHEMBL5419215 |
| 9.55 | IC50 | 0.28 | nM | CHEMBL5422776 |
| 9.55 | IC50 | 0.28 | nM | CHEMBL6174135 |
| 9.54 | IC50 | 0.29 | nM | CHEMBL3410091 |
| 9.52 | IC50 | 0.3 | nM | BISARYLMALEIMIDE 1 |
| 9.52 | IC50 | 0.3 | nM | CHEMBL6177098 |
| 9.51 | IC50 | 0.31 | nM | CHEMBL5436595 |
| 9.51 | IC50 | 0.31 | nM | CHEMBL5410665 |
| 9.51 | IC50 | 0.31 | nM | CHEMBL6177052 |
PubChem BioAssay actives
2554 with measured affinity, of 6100 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 3-amino-6-[4-(4-methylpiperazin-1-yl)sulfonylphenyl]-N-pyridin-3-ylpyrazine-2-carboxamide | 2017477: Inhibition of recombinant human GSK-3beta using YRRAAVPPSPSLSRHSSPHQ(pS)EDEE as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by Kinase-Glo luminescent kinase assay | ic50 | <0.0001 | uM |
| (3R)-1-[3-[[3-amino-6-(2-fluoro-5-propan-2-yloxyphenyl)pyrazine-2-carbonyl]amino]-4-pyridinyl]piperidine-3-carboxylic acid | 1947698: Binding affinity to human GSK-3beta assessed as equilibrium dissociation constant measured upto 240 min by TR-FRET assay | kd | <0.0001 | uM |
| 3-[3-(2,3-dihydroxypropylamino)phenyl]-4-(5-fluoro-1-methylindol-3-yl)pyrrole-2,5-dione | 465257: Inhibition of human recombinant GSK3-beta assessed as [gamma33]ATP transfer to biotinylated CREB-peptide substrate after 1 hr by scintillation counting | kd | 0.0001 | uM |
| 2-(cyclopropanecarbonylamino)-N-[4-[(3S)-3-methylmorpholin-4-yl]-3-pyridinyl]pyridine-4-carboxamide | 1937603: Inhibition of GSK-3beta (unknown origin) incubated for 1 hr by HTRF assay | ic50 | 0.0001 | uM |
| 2-(cyclopropanecarbonylamino)-N-[4-(3,3-dimethylmorpholin-4-yl)-3-pyridinyl]pyridine-4-carboxamide | 1937603: Inhibition of GSK-3beta (unknown origin) incubated for 1 hr by HTRF assay | ic50 | 0.0001 | uM |
| 2-(cyclopropanecarbonylamino)-N-[4-(2-hydroxypropan-2-yl)-3-pyridinyl]pyridine-4-carboxamide | 1937603: Inhibition of GSK-3beta (unknown origin) incubated for 1 hr by HTRF assay | ic50 | 0.0001 | uM |
| 2-(4-cyanoanilino)-N-(4-phenyl-3-pyridinyl)pyrimidine-4-carboxamide | 1990476: Displacement of FL-KRREILSRRP[ps]ERYR-NH2 from human recombinant N-terminal His6-tagged GSK-3-beta (14 to 306 residues) H355L mutant expressed in baculovirus-infected Sf21 cells incubated for 20 hrs by fluorescence based analysis | ic50 | 0.0001 | uM |
| 2-(4-cyanoanilino)-N-[4-(2,2,2-trifluoroethoxy)-3-pyridinyl]pyrimidine-4-carboxamide | 1990476: Displacement of FL-KRREILSRRP[ps]ERYR-NH2 from human recombinant N-terminal His6-tagged GSK-3-beta (14 to 306 residues) H355L mutant expressed in baculovirus-infected Sf21 cells incubated for 20 hrs by fluorescence based analysis | ic50 | 0.0001 | uM |
| 2-[(2R)-4-(4-methoxyphenyl)-2-methylpiperazin-1-yl]-3-methyl-6-pyrimidin-4-ylpyrimidin-4-one | 1488461: Inhibition of human GSK-3beta using prephosphorylated-GS1 peptide as substrate after 1 hr in presence of [gamma-32P]ATP by liquid scintillation spectrometric analysis | ic50 | 0.0001 | uM |
| 3-(5-methoxy-1-benzofuran-7-yl)-4-[1-[2-(4-methylpiperazin-1-yl)ethyl]indol-3-yl]pyrrole-2,5-dione | 419615: Inhibition of human GSK3-beta | ic50 | 0.0001 | uM |
| 3-amino-6-[4-(4-methylpiperazin-1-yl)sulfonylphenyl]-N-[4-(pyrrolidin-1-ylmethyl)-3-pyridinyl]pyrazine-2-carboxamide | 706596: Inhibition of human recombinant GSK3beta using biotin- AAEELDSRAGS(PO3H2)PQL as substrate and [gamma32P]ATP after 20 mins by scintillation proximity assay | ki | 0.0002 | uM |
| 2-(cyclopropanecarbonylamino)-N-[4-(4,4-difluoropiperidin-1-yl)-3-pyridinyl]pyridine-4-carboxamide | 1937603: Inhibition of GSK-3beta (unknown origin) incubated for 1 hr by HTRF assay | ic50 | 0.0002 | uM |
| 2-(3-chloro-4-cyanoanilino)-N-(4-phenyl-3-pyridinyl)pyrimidine-4-carboxamide | 1990476: Displacement of FL-KRREILSRRP[ps]ERYR-NH2 from human recombinant N-terminal His6-tagged GSK-3-beta (14 to 306 residues) H355L mutant expressed in baculovirus-infected Sf21 cells incubated for 20 hrs by fluorescence based analysis | ic50 | 0.0002 | uM |
| 2-anilino-N-[4-(4,4-difluoropiperidin-1-yl)-3-pyridinyl]pyrimidine-4-carboxamide | 1990476: Displacement of FL-KRREILSRRP[ps]ERYR-NH2 from human recombinant N-terminal His6-tagged GSK-3-beta (14 to 306 residues) H355L mutant expressed in baculovirus-infected Sf21 cells incubated for 20 hrs by fluorescence based analysis | ic50 | 0.0002 | uM |
| 2-(3-fluoro-4-methoxyanilino)-N-(4-phenyl-3-pyridinyl)pyrimidine-4-carboxamide | 1990476: Displacement of FL-KRREILSRRP[ps]ERYR-NH2 from human recombinant N-terminal His6-tagged GSK-3-beta (14 to 306 residues) H355L mutant expressed in baculovirus-infected Sf21 cells incubated for 20 hrs by fluorescence based analysis | ic50 | 0.0002 | uM |
| N-[4-(2-methylmorpholin-4-yl)-3-pyridinyl]-2-phenylimidazo[1,2-b]pyridazine-8-carboxamide | 1934090: Inhibition of GSK3beta (unknown origin) | ic50 | 0.0002 | uM |
| 2-anilino-N-[4-(2,2,2-trifluoroethoxy)-3-pyridinyl]pyrimidine-4-carboxamide | 1990476: Displacement of FL-KRREILSRRP[ps]ERYR-NH2 from human recombinant N-terminal His6-tagged GSK-3-beta (14 to 306 residues) H355L mutant expressed in baculovirus-infected Sf21 cells incubated for 20 hrs by fluorescence based analysis | ic50 | 0.0002 | uM |
| 2-[(3-chlorocyclobutanecarbonyl)amino]-N-[4-(4,4-difluoropiperidin-1-yl)-3-pyridinyl]pyridine-4-carboxamide | 1937603: Inhibition of GSK-3beta (unknown origin) incubated for 1 hr by HTRF assay | ic50 | 0.0002 | uM |
| 2-[(2R)-4-(2-fluorophenyl)-2-methylpiperazin-1-yl]-3-methyl-6-pyrimidin-4-ylpyrimidin-4-one | 1488461: Inhibition of human GSK-3beta using prephosphorylated-GS1 peptide as substrate after 1 hr in presence of [gamma-32P]ATP by liquid scintillation spectrometric analysis | ic50 | 0.0002 | uM |
| 2-[(2R)-4-(3-methoxyphenyl)-2-methylpiperazin-1-yl]-3-methyl-6-pyrimidin-4-ylpyrimidin-4-one | 1488461: Inhibition of human GSK-3beta using prephosphorylated-GS1 peptide as substrate after 1 hr in presence of [gamma-32P]ATP by liquid scintillation spectrometric analysis | ic50 | 0.0002 | uM |
| 3-imidazo[1,2-b]pyridazin-3-yl-4-[10-(piperidine-1-carbonyl)-1,10-diazatricyclo[6.4.1.04,13]trideca-2,4,6,8(13)-tetraen-3-yl]pyrrole-2,5-dione | 248695: Inhibitory concentration to inhibit Ser396 phosphorylation of tau, a natural substrate of GSK-3 in SY5Y cells | ic50 | 0.0003 | uM |
| 2-(cyclopropanecarbonylamino)-N-[4-(1-hydroxyethyl)-3-pyridinyl]pyridine-4-carboxamide | 1937603: Inhibition of GSK-3beta (unknown origin) incubated for 1 hr by HTRF assay | ic50 | 0.0003 | uM |
| 2-[2-(cyclopropanecarbonylamino)-4-pyridinyl]-4-(cyclopropylmethoxy)-1,3-thiazole-5-carboxamide | 1198904: Inhibition of GSK3beta (unknown origin) activity by competitive binding assay | ic50 | 0.0003 | uM |
| 2-(4-methylsulfonylanilino)-N-(4-phenyl-3-pyridinyl)pyrimidine-4-carboxamide | 1990476: Displacement of FL-KRREILSRRP[ps]ERYR-NH2 from human recombinant N-terminal His6-tagged GSK-3-beta (14 to 306 residues) H355L mutant expressed in baculovirus-infected Sf21 cells incubated for 20 hrs by fluorescence based analysis | ic50 | 0.0003 | uM |
| 2-anilino-N-[4-(4-fluorophenyl)-3-pyridinyl]pyrimidine-4-carboxamide | 1990476: Displacement of FL-KRREILSRRP[ps]ERYR-NH2 from human recombinant N-terminal His6-tagged GSK-3-beta (14 to 306 residues) H355L mutant expressed in baculovirus-infected Sf21 cells incubated for 20 hrs by fluorescence based analysis | ic50 | 0.0003 | uM |
| 2-(4-cyanoanilino)-N-[4-(4-fluorophenyl)-3-pyridinyl]pyrimidine-4-carboxamide | 1990476: Displacement of FL-KRREILSRRP[ps]ERYR-NH2 from human recombinant N-terminal His6-tagged GSK-3-beta (14 to 306 residues) H355L mutant expressed in baculovirus-infected Sf21 cells incubated for 20 hrs by fluorescence based analysis | ic50 | 0.0003 | uM |
| N-[4-(2,2,2-trifluoroethoxy)-3-pyridinyl]-2-[4-(trifluoromethyl)anilino]pyrimidine-4-carboxamide | 1990476: Displacement of FL-KRREILSRRP[ps]ERYR-NH2 from human recombinant N-terminal His6-tagged GSK-3-beta (14 to 306 residues) H355L mutant expressed in baculovirus-infected Sf21 cells incubated for 20 hrs by fluorescence based analysis | ic50 | 0.0003 | uM |
| 2-(4-methylanilino)-N-(4-phenyl-3-pyridinyl)pyrimidine-4-carboxamide | 1990476: Displacement of FL-KRREILSRRP[ps]ERYR-NH2 from human recombinant N-terminal His6-tagged GSK-3-beta (14 to 306 residues) H355L mutant expressed in baculovirus-infected Sf21 cells incubated for 20 hrs by fluorescence based analysis | ic50 | 0.0003 | uM |
| 2-[3-(4-fluoro-2-methoxyphenyl)piperazin-1-yl]-3-methyl-6-pyrimidin-4-ylpyrimidin-4-one;hydrochloride | 1488483: Inhibition of recombinant human GSK-3beta using prephosphorylated GS-1 peptide as substrate after 1 hr in presence of [gamma-32P]ATP by liquid scintillation spectrometric method | ic50 | 0.0003 | uM |
| N-[3-[4-[[(3,5-ditert-butyl-4-hydroxybenzoyl)amino]methyl]triazol-1-yl]propyl]-5-(3-iodo-4-methoxyphenyl)-1,3-oxazole-4-carboxamide | 2017477: Inhibition of recombinant human GSK-3beta using YRRAAVPPSPSLSRHSSPHQ(pS)EDEE as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by Kinase-Glo luminescent kinase assay | ic50 | 0.0003 | uM |
| 5-(3-chloro-4-methoxyphenyl)-N-[3-[4-[[(E)-3-(3,5-ditert-butyl-4-hydroxyphenyl)prop-2-enoyl]amino]phenyl]propyl]-1,3-oxazole-4-carboxamide | 2017477: Inhibition of recombinant human GSK-3beta using YRRAAVPPSPSLSRHSSPHQ(pS)EDEE as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by Kinase-Glo luminescent kinase assay | ic50 | 0.0003 | uM |
| 5-(3-chloro-4-methoxyphenyl)-N-[3-[4-[[3-(3,5-ditert-butyl-4-hydroxyphenyl)propanoylamino]methyl]triazol-1-yl]propyl]-1,3-oxazole-4-carboxamide | 2017477: Inhibition of recombinant human GSK-3beta using YRRAAVPPSPSLSRHSSPHQ(pS)EDEE as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by Kinase-Glo luminescent kinase assay | ic50 | 0.0003 | uM |
| N-[3-[4-[[[(E)-3-(3,5-ditert-butyl-4-hydroxyphenyl)prop-2-enoyl]amino]methyl]triazol-1-yl]propyl]-5-(3-iodo-4-methoxyphenyl)-1,3-oxazole-4-carboxamide | 2017477: Inhibition of recombinant human GSK-3beta using YRRAAVPPSPSLSRHSSPHQ(pS)EDEE as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by Kinase-Glo luminescent kinase assay | ic50 | 0.0003 | uM |
| 3-amino-6-(4-piperidin-1-ylsulfonylphenyl)-N-pyridin-3-ylpyrazine-2-carboxamide | 706596: Inhibition of human recombinant GSK3beta using biotin- AAEELDSRAGS(PO3H2)PQL as substrate and [gamma32P]ATP after 20 mins by scintillation proximity assay | ki | 0.0004 | uM |
| 2-[2-(cyclopropanecarbonylamino)-4-pyridinyl]-4-propan-2-yloxy-1,3-thiazole-5-carboxamide | 1198904: Inhibition of GSK3beta (unknown origin) activity by competitive binding assay | ic50 | 0.0004 | uM |
| 4-cyclobutyloxy-2-[2-(cyclopropanecarbonylamino)-4-pyridinyl]-1,3-thiazole-5-carboxamide | 1198904: Inhibition of GSK3beta (unknown origin) activity by competitive binding assay | ic50 | 0.0004 | uM |
| 3-(5-chloro-1-methylindol-3-yl)-4-[3-(2,3-dihydroxypropylamino)phenyl]pyrrole-2,5-dione | 465257: Inhibition of human recombinant GSK3-beta assessed as [gamma33]ATP transfer to biotinylated CREB-peptide substrate after 1 hr by scintillation counting | ic50 | 0.0004 | uM |
| 2-(4-methoxyanilino)-N-(4-phenyl-3-pyridinyl)pyrimidine-4-carboxamide | 1990476: Displacement of FL-KRREILSRRP[ps]ERYR-NH2 from human recombinant N-terminal His6-tagged GSK-3-beta (14 to 306 residues) H355L mutant expressed in baculovirus-infected Sf21 cells incubated for 20 hrs by fluorescence based analysis | ic50 | 0.0004 | uM |
| 2-anilino-N-(4-phenyl-3-pyridinyl)pyrimidine-4-carboxamide | 1990476: Displacement of FL-KRREILSRRP[ps]ERYR-NH2 from human recombinant N-terminal His6-tagged GSK-3-beta (14 to 306 residues) H355L mutant expressed in baculovirus-infected Sf21 cells incubated for 20 hrs by fluorescence based analysis | ic50 | 0.0004 | uM |
| 2-(4-cyano-2-methylanilino)-N-(4-phenyl-3-pyridinyl)pyrimidine-4-carboxamide | 1990476: Displacement of FL-KRREILSRRP[ps]ERYR-NH2 from human recombinant N-terminal His6-tagged GSK-3-beta (14 to 306 residues) H355L mutant expressed in baculovirus-infected Sf21 cells incubated for 20 hrs by fluorescence based analysis | ic50 | 0.0004 | uM |
| 2-[4-(difluoromethoxy)anilino]-N-(4-phenyl-3-pyridinyl)pyrimidine-4-carboxamide | 1990476: Displacement of FL-KRREILSRRP[ps]ERYR-NH2 from human recombinant N-terminal His6-tagged GSK-3-beta (14 to 306 residues) H355L mutant expressed in baculovirus-infected Sf21 cells incubated for 20 hrs by fluorescence based analysis | ic50 | 0.0004 | uM |
| 2-[4-(difluoromethoxy)anilino]-N-[4-(4-fluorophenyl)-3-pyridinyl]pyrimidine-4-carboxamide | 1990476: Displacement of FL-KRREILSRRP[ps]ERYR-NH2 from human recombinant N-terminal His6-tagged GSK-3-beta (14 to 306 residues) H355L mutant expressed in baculovirus-infected Sf21 cells incubated for 20 hrs by fluorescence based analysis | ic50 | 0.0004 | uM |
| 4-[(3-chlorophenyl)diazenyl]-5-(3,4-dimethoxyphenyl)-1,2-dihydropyrazol-3-one | 465436: Inhibition of GSK3-beta assessed as NADH level after 10 mins by pyruvate kinase/lactate dehydrogenase coupled spectrophotometric assay | ki | 0.0004 | uM |
| 5-(3,4-dimethoxyphenyl)-4-[(3-methoxyphenyl)diazenyl]-1,2-dihydropyrazol-3-one | 465436: Inhibition of GSK3-beta assessed as NADH level after 10 mins by pyruvate kinase/lactate dehydrogenase coupled spectrophotometric assay | ki | 0.0004 | uM |
| 2-[3-(4-fluoro-2-methoxyphenyl)piperazin-1-yl]-3-methyl-6-pyridin-4-ylpyrimidin-4-one;hydrochloride | 1488483: Inhibition of recombinant human GSK-3beta using prephosphorylated GS-1 peptide as substrate after 1 hr in presence of [gamma-32P]ATP by liquid scintillation spectrometric method | ic50 | 0.0004 | uM |
| 3-(1-benzofuran-3-yl)-4-(5-fluoro-1-methylindol-3-yl)pyrrole-2,5-dione | 1872903: Inhibition of GSK-3beta (unknown origin) | ic50 | 0.0004 | uM |
| 5-(3-chloro-4-methoxyphenyl)-N-[3-[[(E)-3-(3,5-ditert-butyl-4-hydroxyphenyl)prop-2-enoyl]amino]propyl]-1,3-oxazole-4-carboxamide | 2017477: Inhibition of recombinant human GSK-3beta using YRRAAVPPSPSLSRHSSPHQ(pS)EDEE as substrate preincubated for 15 mins followed by substrate addition and measured after 60 mins by Kinase-Glo luminescent kinase assay | ic50 | 0.0004 | uM |
| 2-[(2R)-4-(4-fluorophenyl)-2-methylpiperazin-1-yl]-3-methyl-6-pyrimidin-4-ylpyrimidin-4-one | 1488461: Inhibition of human GSK-3beta using prephosphorylated-GS1 peptide as substrate after 1 hr in presence of [gamma-32P]ATP by liquid scintillation spectrometric analysis | ic50 | 0.0004 | uM |
| 3-amino-6-[2-methyl-4-(4-methylpiperazin-1-yl)sulfonylphenyl]-N-pyridin-3-ylpyrazine-2-carboxamide | 706596: Inhibition of human recombinant GSK3beta using biotin- AAEELDSRAGS(PO3H2)PQL as substrate and [gamma32P]ATP after 20 mins by scintillation proximity assay | ki | 0.0005 | uM |
| 3-amino-N-[4-[(dimethylamino)methyl]-3-pyridinyl]-6-(4-pyrrolidin-1-ylsulfonylphenyl)pyrazine-2-carboxamide | 706596: Inhibition of human recombinant GSK3beta using biotin- AAEELDSRAGS(PO3H2)PQL as substrate and [gamma32P]ATP after 20 mins by scintillation proximity assay | ki | 0.0005 | uM |
CTD chemical–gene interactions
342 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Lithium Chloride | affects reaction, decreases activity, decreases expression, decreases reaction, affects phosphorylation (+6 more) | 24 |
| 2-(4-morpholinyl)-8-phenyl-4H-1-benzopyran-4-one | decreases expression, increases activity, affects cotreatment, decreases phosphorylation, increases abundance (+6 more) | 21 |
| sodium arsenite | increases phosphorylation, affects cotreatment, decreases phosphorylation, increases reaction, increases activity (+6 more) | 17 |
| Resveratrol | decreases activity, affects reaction, decreases expression, affects expression, affects phosphorylation (+9 more) | 13 |
| Arsenic Trioxide | increases phosphorylation, decreases phosphorylation, affects cotreatment, increases expression, increases activity (+6 more) | 10 |
| SB 216763 | affects reaction, decreases reaction, increases expression, affects cotreatment, decreases response to substance (+4 more) | 8 |
| Wortmannin | affects reaction, increases expression, decreases activity, decreases reaction, increases phosphorylation (+2 more) | 8 |
| Metformin | decreases expression, decreases phosphorylation, decreases reaction, increases reaction, increases expression (+1 more) | 8 |
| cyanoginosin LR | decreases reaction, affects binding, increases reaction, decreases activity, increases phosphorylation (+2 more) | 6 |
| Valproic Acid | affects cotreatment, decreases expression, affects expression, decreases activity, increases phosphorylation | 6 |
| Cadmium Chloride | decreases phosphorylation, decreases reaction, increases abundance, increases expression, decreases activity (+1 more) | 6 |
| 2-(1H-indazol-4-yl)-6-(4-methanesulfonylpiperazin-1-ylmethyl)-4-morpholin-4-ylthieno(3,2-d)pyrimidine | decreases phosphorylation, increases response to substance | 5 |
| Acetylcysteine | increases phosphorylation, decreases phosphorylation, increases abundance, affects cotreatment, increases activity (+2 more) | 5 |
| Arsenic | increases abundance, increases phosphorylation, decreases expression, increases expression, affects cotreatment (+2 more) | 5 |
| Cadmium | decreases phosphorylation, decreases reaction, increases abundance, decreases expression, increases phosphorylation (+1 more) | 5 |
| Cisplatin | decreases phosphorylation, decreases reaction, decreases expression, increases expression, affects expression (+2 more) | 5 |
| Glucose | decreases reaction, affects cotreatment, decreases chemical synthesis, increases expression, increases phosphorylation (+1 more) | 5 |
| Quercetin | decreases phosphorylation, increases reaction, decreases activity, decreases expression | 5 |
| bisphenol A | affects binding, affects cotreatment, increases methylation, decreases methylation, increases expression (+1 more) | 4 |
| N-(oxo-5,6-dihydrophenanthridin-2-yl)-N,N-dimethylacetamide hydrochloride | decreases phosphorylation, decreases reaction, affects reaction, increases phosphorylation, increases reaction (+1 more) | 4 |
| N-(4-methoxybenzyl)-N’-(5-nitro-1,3-thiazol-2-yl)urea | decreases activity, increases phosphorylation, decreases expression, increases response to substance, decreases response to substance (+3 more) | 4 |
| dorsomorphin | increases phosphorylation, decreases activity, affects cotreatment, decreases expression, decreases reaction | 4 |
| MK 2206 | decreases reaction, increases expression, increases phosphorylation | 4 |
| Hydrogen Peroxide | affects reaction, increases phosphorylation, increases reaction, affects expression, decreases phosphorylation (+1 more) | 4 |
| Lithium | affects reaction, affects binding, decreases reaction, increases phosphorylation, increases reaction (+1 more) | 4 |
| Tretinoin | increases reaction, decreases reaction, increases phosphorylation, affects expression, affects cotreatment (+1 more) | 4 |
| 1-Methyl-4-phenylpyridinium | increases cleavage, decreases phosphorylation, increases activity, increases expression, decreases reaction (+2 more) | 4 |
| Okadaic Acid | increases activity, decreases activity, increases phosphorylation, decreases phosphorylation, affects binding (+3 more) | 4 |
| baicalein | decreases reaction, increases phosphorylation, decreases phosphorylation | 3 |
| benzyloxycarbonylleucyl-leucyl-leucine aldehyde | affects binding, decreases reaction, decreases expression, increases phosphorylation | 3 |
ChEMBL screening assays
1871 unique, capped per target: 1839 binding, 18 functional, 12 admet, 2 toxicity
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1032325 | Binding | Inhibition of GSK3-mediated beta-casein phosphorylation in human SH-SY5Y cells in presence of MG132 by Western blot analysis | Soluble 3’,6-substituted indirubins with enhanced selectivity toward glycogen synthase kinase -3 alter circadian period. — J Med Chem |
| CHEMBL709400 | Functional | Inhibition of glycogen synthesis in rat skeletal muscle L6 cells | Novel GSK-3 inhibitors with improved cellular activity. — Bioorg Med Chem Lett |
| CHEMBL4136607 | ADMET | Inhibition of recombinant GSK3beta (unknown origin) using HSSPHQ(Sp)EDEEE as substrate by pyruvate kinase-lactate dehydrogenase coupled assay | Mtb PKNA/PKNB Dual Inhibition Provides Selectivity Advantages for Inhibitor Design To Minimize Host Kinase Interactions. — ACS Med Chem Lett |
Cellosaurus cell lines
10 cell lines: 7 cancer cell line, 2 transformed cell line, 1 spontaneously immortalized cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B8WF | Abcam MCF-7 GSK3B KO | Cancer cell line | Female |
| CVCL_B9JA | Abcam A-549 GSK3B KO | Cancer cell line | Male |
| CVCL_D7R3 | Ubigene A-549 GSK3B KO | Cancer cell line | Male |
| CVCL_D8M7 | Ubigene HCT 116 GSK3B KO | Cancer cell line | Male |
| CVCL_D9G0 | Ubigene HEK293 GSK3B KO | Transformed cell line | Female |
| CVCL_E0E4 | Ubigene HeLa GSK3B KO | Cancer cell line | Female |
| CVCL_E5GF | HEK293 GSK3B KO | Transformed cell line | Female |
| CVCL_RR02 | MCF10A GSK3B (-/-) | Spontaneously immortalized cell line | Female |
| CVCL_SQ66 | HAP1 GSK3B (-) 1 | Cancer cell line | Male |
| CVCL_SQ67 | HAP1 GSK3B (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
496 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT04586348 | PHASE4 | UNKNOWN | Prenatal Iodine Supplementation and Early Childhood Neurodevelopment |
| NCT04873115 | PHASE4 | UNKNOWN | Double-blind, Placebo-controlled, Randomized Clinical Trial Comparing the Efficacy and Safety of Sialanar Plus orAl rehabiLitation Against Placebo Plus Oral Rehabilitation for chIldren and Adolescents With seVere Sialorrhoea and Neurodisabilties, |
| NCT00374465 | PHASE4 | UNKNOWN | Therapy With Verapamil or Carvedilol in Chronic Heart Failure |
| NCT01293903 | PHASE4 | COMPLETED | Study of Qiliqiangxin Capsule to Treat Dilated Cardiomyopathy |
| NCT01557140 | PHASE4 | COMPLETED | A Randomized Trial of Carvedilol in Chronic Chagas Cardiomyopathy |
| NCT01917149 | PHASE4 | COMPLETED | Supramaximal Titrated Inhibition of RAAS in Dilated Cardiomyopathy |
| NCT02115581 | PHASE4 | COMPLETED | Coenzyme Q10 Supplementation in Children With Idiopathic Dilated Cardiomyopathy |
| NCT06236022 | PHASE4 | RECRUITING | The Effects of Sirolimus in Patients With Dilated Cardiomyopathy Infected With Kaposi Sarcoma-associated Virus |
| NCT05657860 | PHASE4 | COMPLETED | Guanfacine Extended Release for the Reduction of Aggression and Self-injurious Behavior Associated With Prader-Willi Syndrome |
| NCT05744479 | PHASE4 | RECRUITING | Metformin for Antipsychotic-induced Weight Gain in Adults With Intellectual Disability |
| NCT06107829 | PHASE4 | WITHDRAWN | Valbenazine Treatment of Tardive Dyskinesia in Adults With Intellectual/Developmental Disabilities |
| NCT06997198 | PHASE4 | NOT_YET_RECRUITING | Deutetrabenazine Treatment for Tardive Dyskinesia in Intellectual/Developmental Disabilities |
| NCT02559102 | PHASE3 | COMPLETED | Dexmedetomidine Sedation Versus General Anaesthesia for Inguinal Hernia Surgery in Infants |
| NCT02757079 | PHASE3 | COMPLETED | Study of the Efficacy and Safety of NPC-15 for Sleep Disorders of Children With Neurodevelopmental Disorders |
| NCT06915480 | PHASE3 | RECRUITING | Reducing Missed Appointments |
| NCT07377032 | PHASE3 | RECRUITING | TAP-GRIN: Interventional Study on Patients With GRIN-related Neurodevelopmental Disorders |
| NCT00333827 | PHASE3 | COMPLETED | Cell Therapy In Dilated Cardiomyopathy |
| NCT00505154 | PHASE3 | COMPLETED | Effect of Rosuvastatin on Left Ventricular Remodeling |
| NCT01223703 | PHASE3 | COMPLETED | PUFAs and Left Ventricular Function in Heart Failure |
| NCT01583114 | PHASE3 | TERMINATED | PREclinical Mutation CARriers From Families With DIlated Cardiomyopathy and ACE Inhibitors |
| NCT01914081 | PHASE3 | UNKNOWN | Resveratrol: A Potential Anti- Remodeling Agent in Heart Failure, From Bench to Bedside |
| NCT02989181 | PHASE3 | UNKNOWN | Continues Positive Airway Pressure Treatment for Patients With Dilated Cardiomyopathy and Obstructive Sleep Apnea |
| NCT03439514 | PHASE3 | TERMINATED | A Study of ARRY-371797 (PF-07265803) in Patients With Symptomatic Dilated Cardiomyopathy Due to a Lamin A/C Gene Mutation |
| NCT05237323 | PHASE3 | COMPLETED | Micophenolate Mofetil Versus Azathioprine in Myocarditis |
| NCT05849766 | PHASE3 | COMPLETED | Effect of Dapagliflozin on Cardiac Structure, Function and Secondary Mitral Regurgitation in Patients with Left Ventricle Dysfunction |
| NCT06250257 | PHASE3 | RECRUITING | Bromocriptine in Dilated Cardiomyopathy Among Women of Reproductive Age |
| NCT02270736 | PHASE3 | COMPLETED | Clinical Study to Investigate the Efficacy and Safety of NT 201 Compared to Placebo in the Treatment of Chronic Troublesome Drooling Associated With Neurological Disorders and/or Intellectual Disability |
| NCT02909959 | PHASE2 | COMPLETED | Sulforaphane for the Treatment of Young Men With Autism Spectrum Disorder |
| NCT06081348 | PHASE2 | RECRUITING | Sertraline vs. Placebo in the Treatment of Anxiety in Children and AdoLescents With NeurodevelopMental Disorders |
| NCT06352372 | PHASE2 | COMPLETED | Safety and Efficacy of tPBM for Epileptiform Activity in Autism |
| NCT00629018 | PHASE2 | COMPLETED | Safety and Efficacy Study of Stem Cell Transplantation to Treat Dilated Cardiomyopathy |
| NCT00629096 | PHASE2 | COMPLETED | Intracoronary Infusion of Autologous Bone Marrow Cells for Treatment of Idiopathic Dilated Cardiomyopathy |
| NCT00765518 | PHASE2 | COMPLETED | Use of Ixmyelocel-T (Formerly Cardiac Repair Cell [CRC] Treatment) in Patients With Heart Failure Due to Dilated Cardiomyopathy (IMPACT-DCM) |
| NCT00847964 | PHASE2 | COMPLETED | Safety and Feasibility of Algisyl-LVR™ as a Method of Left Ventricular Restoration in Patients With DCM Undergoing Open-heart Surgery |
| NCT01020968 | PHASE2 | COMPLETED | Use of Ixmyelocel-T (Formerly Catheter-based Cardiac Repair Cell [CRC]) Treatment in Patients With Heart Failure Due to Dilated Cardiomyopathy |
| NCT01302171 | PHASE2 | COMPLETED | Bone Marrow Derived Adult Stem Cells for Dilated Cardiomyopathy |
| NCT01350310 | PHASE2 | COMPLETED | Safety and Efficacy Study of Intramyocardial Stem Cell Therapy in Patients With Dilated Cardiomyopathy |
| NCT02133911 | PHASE2 | COMPLETED | A Pilot Trial of Ranolazine to Treat Patients With Dilated Cardiomyopathy |
| NCT03071653 | PHASE2 | SUSPENDED | Left Cardiac Sympathetic Denervation for Cardiomyopathy Feasibility Pilot Study |
| NCT03572660 | PHASE2 | ACTIVE_NOT_RECRUITING | Use of Bone Marrow Derived Stem Cell and G-CSF With Circulatory Assistance in the Treatment of DCM |
Related Atlas pages
- Associated diseases: neurodevelopmental disorder
- Targeted by drugs: Lithium