GTF3C2-AS2

Summary

GTF3C2-AS2 (GTF3C2 antisense RNA 2, HGNC:55699) is a long non-coding RNA gene on chromosome 2p23.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55699
Approved symbol	GTF3C2-AS2
Name	GTF3C2 antisense RNA 2
Location	2p23.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC074117.10, AC074117.1
Ensembl gene	ENSG00000234072
Ensembl biotype	lncRNA
Entrez	105374363
RNAcentral	URS00026A270A — lncRNA, 2202 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000412749, ENST00000447070, ENST00000453289, ENST00000847761

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000412749 — 3 exons

Exon	Start	End
ENSE00001660190	27357808	27357902
ENSE00004276756	27357151	27357292
ENSE00004276757	27367424	27367881

Expression profiles

Bgee: expression breadth ubiquitous, 134 present calls, max score 88.89.

Top tissues by expression

134 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	88.89	gold quality
right uterine tube	UBERON:0001302	85.02	gold quality
bone marrow cell	CL:0002092	84.32	gold quality
right lobe of liver	UBERON:0001114	83.84	gold quality
mucosa of transverse colon	UBERON:0004991	82.97	gold quality
skeletal muscle tissue	UBERON:0001134	82.22	gold quality
lower esophagus mucosa	UBERON:0035834	82.20	gold quality
endometrium	UBERON:0001295	81.29	gold quality
colonic epithelium	UBERON:0000397	81.27	gold quality
duodenum	UBERON:0002114	81.16	gold quality
left adrenal gland cortex	UBERON:0035825	80.96	gold quality
right lobe of thyroid gland	UBERON:0001119	80.95	gold quality
left lobe of thyroid gland	UBERON:0001120	80.91	gold quality
cortex of kidney	UBERON:0001225	80.86	gold quality
prostate gland	UBERON:0002367	80.80	gold quality
liver	UBERON:0002107	80.79	gold quality
thyroid gland	UBERON:0002046	80.64	gold quality
pituitary gland	UBERON:0000007	80.58	gold quality
spleen	UBERON:0002106	80.54	gold quality
right adrenal gland	UBERON:0001233	80.42	gold quality
granulocyte	CL:0000094	80.37	gold quality
left adrenal gland	UBERON:0001234	80.31	gold quality
right adrenal gland cortex	UBERON:0035827	80.14	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	80.13	gold quality
metanephros cortex	UBERON:0010533	80.10	gold quality
muscle tissue	UBERON:0002385	80.09	gold quality
small intestine	UBERON:0002108	80.07	gold quality
adenohypophysis	UBERON:0002196	79.98	gold quality
small intestine Peyer’s patch	UBERON:0003454	79.87	gold quality
adrenal gland	UBERON:0002369	79.73	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.