GTSE1-DT

Summary

GTSE1-DT (GTSE1 divergent transcript, HGNC:27163) is a long non-coding RNA gene on chromosome 22q13.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27163
Approved symbol	GTSE1-DT
Name	GTSE1 divergent transcript
Location	22q13.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000277232
Ensembl biotype	lncRNA
Entrez	150384
RNAcentral	URS000075E261 — lncRNA, 1532 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000617229, ENST00000623117

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000617229 — 1 exons

Exon	Start	End
ENSE00003724548	46295695	46296000

Expression profiles

Bgee: expression breadth ubiquitous, 156 present calls, max score 86.61.

Top tissues by expression

243 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	86.61	gold quality
sural nerve	UBERON:0015488	79.14	gold quality
bone marrow cell	CL:0002092	69.08	silver quality
ventricular zone	UBERON:0003053	68.70	gold quality
ganglionic eminence	UBERON:0004023	66.95	gold quality
apex of heart	UBERON:0002098	65.25	gold quality
cortical plate	UBERON:0005343	65.08	gold quality
granulocyte	CL:0000094	64.82	gold quality
hindlimb stylopod muscle	UBERON:0004252	64.32	gold quality
prefrontal cortex	UBERON:0000451	64.17	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	62.35	gold quality
islet of Langerhans	UBERON:0000006	62.10	gold quality
adenohypophysis	UBERON:0002196	61.54	gold quality
leukocyte	CL:0000738	60.79	gold quality
right uterine tube	UBERON:0001302	60.57	gold quality
spinal cord	UBERON:0002240	60.33	gold quality
monocyte	CL:0000576	60.02	gold quality
hypothalamus	UBERON:0001898	59.66	gold quality
mucosa of transverse colon	UBERON:0004991	59.62	gold quality
pituitary gland	UBERON:0000007	59.29	gold quality
amygdala	UBERON:0001876	59.03	gold quality
mucosa of stomach	UBERON:0001199	58.76	gold quality
nucleus accumbens	UBERON:0001882	58.54	gold quality
putamen	UBERON:0001874	58.46	gold quality
Brodmann (1909) area 9	UBERON:0013540	58.46	gold quality
right adrenal gland	UBERON:0001233	57.95	gold quality
muscle of leg	UBERON:0001383	57.45	gold quality
gastrocnemius	UBERON:0001388	57.20	gold quality
substantia nigra	UBERON:0002038	57.07	gold quality
anterior cingulate cortex	UBERON:0009835	56.98	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.80

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.