HBA2
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Also known as HBA-T2
Summary
HBA2 (hemoglobin subunit alpha 2, HGNC:4824) is a protein-coding gene on chromosome 16p13.3, encoding Hemoglobin subunit alpha (P69905). Involved in oxygen transport from the lung to the various peripheral tissues.
The human alpha globin gene cluster located on chromosome 16 spans about 30 kb and includes seven loci: 5’- zeta - pseudozeta - mu - pseudoalpha-1 - alpha-2 - alpha-1 - theta - 3’. The alpha-2 (HBA2) and alpha-1 (HBA1) coding sequences are identical. These genes differ slightly over the 5’ untranslated regions and the introns, but they differ significantly over the 3’ untranslated regions. Two alpha chains plus two beta chains constitute HbA, which in normal adult life comprises about 97% of the total hemoglobin; alpha chains combine with delta chains to constitute HbA-2, which with HbF (fetal hemoglobin) makes up the remaining 3% of adult hemoglobin. Alpha thalassemias result from deletions of each of the alpha genes as well as deletions of both HBA2 and HBA1; some nondeletion alpha thalassemias have also been reported.
Source: NCBI Gene 3040 — RefSeq curated summary.
At a glance
- Gene–disease (curated): HBA2-related alpha thalassemia spectrum (Definitive, ClinGen) — +8 more curated relationships
- GWAS associations: 26
- Clinical variants (ClinVar): 360 total — 45 pathogenic, 80 likely-pathogenic
- Phenotypes (HPO): 54
- Druggable target: yes
- Dosage sensitivity (ClinGen): haploinsufficiency autosomal recessive, triplosensitivity no evidence
- MANE Select transcript:
NM_000517
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:4824 |
| Approved symbol | HBA2 |
| Name | hemoglobin subunit alpha 2 |
| Location | 16p13.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | HBA-T2 |
| Ensembl gene | ENSG00000188536 |
| Ensembl biotype | protein_coding |
| OMIM | 141850 |
| Entrez | 3040 |
Gene structure
Transcript identifiers
Ensembl transcripts: 5 — 4 protein_coding, 1 retained_intron
ENST00000251595, ENST00000397806, ENST00000482565, ENST00000484216, ENST00000866237
RefSeq mRNA: 1 — MANE Select: NM_000517
NM_000517
CCDS: CCDS10398
Canonical transcript exons
ENST00000251595 — 3 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001143637 | 173472 | 173710 |
| ENSE00002733732 | 172876 | 173007 |
| ENSE00003626442 | 173125 | 173329 |
Expression profiles
Bgee: expression breadth ubiquitous, 143 present calls, max score 99.99.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 1.6898 / max 556.1188, expressed in 80 samples.
FANTOM5 promoters (5 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 151864 | 3.5460 | 99 |
| 151866 | 1.6898 | 80 |
| 151862 | 1.6196 | 76 |
| 151863 | 0.5936 | 48 |
| 151861 | 0.1002 | 11 |
Top tissues by expression
143 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| monocyte | CL:0000576 | 99.99 | gold quality |
| blood | UBERON:0000178 | 99.98 | gold quality |
| bone element | UBERON:0001474 | 99.94 | gold quality |
| bone marrow | UBERON:0002371 | 99.94 | gold quality |
| bone marrow cell | CL:0002092 | 99.93 | gold quality |
| placenta | UBERON:0001987 | 99.88 | gold quality |
| spleen | UBERON:0002106 | 99.78 | gold quality |
| apex of heart | UBERON:0002098 | 99.73 | gold quality |
| metanephros cortex | UBERON:0010533 | 99.61 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 99.60 | gold quality |
| ganglionic eminence | UBERON:0004023 | 99.59 | gold quality |
| embryo | UBERON:0000922 | 99.58 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 99.56 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 99.53 | gold quality |
| colonic epithelium | UBERON:0000397 | 99.49 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 99.43 | gold quality |
| temporal lobe | UBERON:0001871 | 99.42 | gold quality |
| amygdala | UBERON:0001876 | 99.42 | gold quality |
| substantia nigra | UBERON:0002038 | 99.38 | gold quality |
| lung | UBERON:0002048 | 99.38 | gold quality |
| granulocyte | CL:0000094 | 99.37 | gold quality |
| pituitary gland | UBERON:0000007 | 99.23 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 99.19 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 99.15 | gold quality |
| adenohypophysis | UBERON:0002196 | 99.12 | gold quality |
| primary visual cortex | UBERON:0002436 | 99.08 | gold quality |
| caudate nucleus | UBERON:0001873 | 99.06 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 99.00 | gold quality |
| hypothalamus | UBERON:0001898 | 98.99 | gold quality |
| putamen | UBERON:0001874 | 98.92 | gold quality |
Single-cell (SCXA)
Detected in 53 experiment(s), a significant marker in 48.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-CURD-122 | yes | 323348.22 |
| E-GEOD-149689 | yes | 321347.65 |
| E-CURD-120 | yes | 317115.31 |
| E-HCAD-36 | yes | 310596.84 |
| E-MTAB-7407 | yes | 299850.73 |
| E-MTAB-8207 | yes | 284915.14 |
| E-CURD-55 | yes | 281308.90 |
| E-MTAB-9221 | yes | 269419.82 |
| E-MTAB-9467 | yes | 262338.85 |
| E-HCAD-8 | yes | 247012.88 |
| E-GEOD-139324 | yes | 241158.23 |
| E-HCAD-4 | yes | 230692.35 |
| E-MTAB-10042 | yes | 230211.49 |
| E-MTAB-6653 | yes | 223511.31 |
| E-MTAB-8495 | yes | 221731.78 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
1 targets.
| Target | Regulation |
|---|---|
| TNF | Activation |
Upstream regulators (CollecTRI, top): ATRX, GATA1, KLF1, MYC
miRNA regulators (miRDB)
5 targeting HBA2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4779 | 99.86 | 66.50 | 1583 |
| HSA-MIR-12123 | 99.52 | 71.79 | 2990 |
| HSA-MIR-499B-5P | 98.35 | 68.39 | 988 |
| HSA-MIR-7160-3P | 96.40 | 64.15 | 462 |
| HSA-MIR-6781-5P | 94.61 | 59.49 | 155 |
Functional genomics
ClinGen dosage: haploinsufficiency 30 (autosomal recessive), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map
Literature-anchored findings (GeneRIF, showing 40)
- Hb Pakse differs from Hb CS by having lysine at 142 instead of glutamine. It also seems to lead to an unstable alpha globin mRNA and slighter higher Hb H levels. (PMID:11836160)
- Allosteric effects of chloride ions at the interfaces between the alphabeta dimers. (PMID:12360531)
- Crystallization and X-ray structure of this protein, isolated from blood of beta-thalassemic patients. (PMID:12659864)
- Review. The effects of alpha-globin genotype on the pathophysiology of sickle cell anemia, HbSC disease, and sickle beta-thalassemia are studied. (PMID:12673836)
- in alpha-thalassemia, transcription of antisense RNA mediates silencing and methylation of the associated CpG island of the HBA2 gene (PMID:12730694)
- High frequency of the Hb A2 abnormality, reaching higher numbers among blacksmiths living in the same village in Mali. (PMID:12779272)
- Alpha-thalassemia mutations in Iranian individuals are not found in HBA2. (PMID:12779276)
- Hb Setif with Asp-to-Tyr missense mutation at codon 94 was studied. The abnormal hemoglobin comprised 15% of total Hb, tested negative for erythrocyte sickling, but exhibited pseudosickling in vitro. (PMID:14649316)
- the phenotype of the carrier state makes it likely that this codon 90 mutation will cause severe Hb H disease when inherited with a two gene deletion mutation (PMID:14649319)
- Sequencing of alpha-globin genes of 18 Sardinian heterozygotes for the Hb G-Philadelphia; identification of the C–>G mutation on the normal alpha alpha chromosome points to an undescribed genotype (PMID:15128423)
- Gene scanning of HBA2 genes in thalassemic patients revealed 3 new alleles: c.1A>G, c.79G>A, and c.281T>G. (PMID:15365991)
- A high-resolution crystal structure of ferrocyanide-bound HbA2 is presented that throws light on the location and mode of binding of ferrocyanide anion with hemoglobin. (PMID:15449937)
- Finds hemoglobin H disease involving the alpha-2-globin mutation (AATAAA–>AATAAG) is a mild thal intermedia phenotype among Kuwaitis (PMID:16103716)
- Data show the frequent juxtaposition of active alpha- and beta-globin genes and of homologous alpha-globin loci that occurs at nuclear speckles and correlates with transcription. (PMID:16418531)
- We proved that, in the human alpha-globin gene cluster, the normal order of structural genes relative to alpha-Upstream Regulatory Element plays a crucial role in the regulation of developmental switching. (PMID:16436049)
- Hb Al-Hammadi Riyadh [codon 75 (GAC–>GTC); alpha75(EF4)Asp–>Val (alpha2)] corresponds to an A–>T transversion in the second exon of the alpha2-globin gene. (PMID:16798639)
- Results describe the shared stabilization functions of pyrimidine-rich determinants in the erythroid 15-lipoxygenase and alpha-globin mRNAs. (PMID:16847316)
- family with a rare combination of two abnormal alpha-globin genes, a two-base deletion and a .7 kb alpha gene deletion. (PMID:17486499)
- interaction of the Hb Constant Spring EE Bart’s disease produces a tetrameric Hb molecule is formed between alpha(CS) and beta(E) chains leading to a hybrid Hb (PMID:17587614)
- multiple origins of the alpha(CS) and a single origin of the alpha(Pakse) mutations in Southeast Asia (PMID:17589844)
- mechanism by which the human globin genes are activated during erythropoiesis (PMID:17715390)
- This work describes the study of the interactions of different hemoglobin variants HbA, HbE and HbF and the globin subunits of HbA with the two aminophospholipids in the presence and absence of cholesterol. (PMID:17916326)
- In alpha-thalassemia, alpha/beta-globin mRNA ratio correlated with the number of functional alpha-globin genes present, whereas in beta-thalassemia, the ratio provided a good indicator of disease severity. (PMID:17920577)
- Our study suggests that the regulation of alpha-URE and beta-LCR on the expression level and developmental switching mode of downstream globin genes is cluster specific. (PMID:17996867)
- Coinheritance of alpha-thalassemia with beta 0-thalassemia/Hb E produces a milder clinical phenotype in contrast to an interaction of alpha-globin gene triplication in severe thalassemia (PMID:18026953)
- Hb Federico II is a novel hemoglobin variant [beta-106 (G8) Leu->Val] (PMID:18591626)
- REVIEW of the complex process of expression of alpha-globin and the complex interaction of factors which are required to balance necessary high expression against the negative impacts of overexpression (PMID:18768527)
- regulation of human alpha-globin synthesis, encoded by two adjacent genes (alpha(2) and alpha(1)) clustered on chromosome 16 (PMID:19048483)
- genotypes of individuals with unexplained hypochromia and/or microcytosis, as well patients with documented Hb H disease from the Dohuk region in northern Iraq were analyzed (PMID:19205971)
- To investigate dynamical differences between the alpha- and beta- globin chains, ligand recombination and heme structural evolution, following HbCO dissociation, was monitored with chain selectivity (PMID:19245215)
- Results report that hemoglobin chains alpha2 nad beta are expressed in mammalian brain neurons and are regulated by a mitochondrial toxin. (PMID:19479992)
- Studies present five new hemoglobin (Hb) variants, Hb Canuts, Hb Ambroise Pare, Hb Beaujolais, Hb Monplaisir and Hb(A2)-North Africa. (PMID:19657833)
- A duplication of the alpha-globin gene locus, including the upstream regulatory region, was present in all patients with thalassemia intermedia. (PMID:19794088)
- alpha-thalassaemia masked by beta gene defects and a new polyadenylation site mutation on the alpha2-globin gene. (PMID:19912309)
- In a cohort of 104 unrelated putative alpha-thal patients, nine carried the point mutation Hb Sallanches and two were homozygotes. The mutation occurred on both the alpha2- or alpha1-globin genes. (PMID:19958194)
- identification of two different mutations involving the first nucleotide of intron 1 of the alpha2-globin gene (PMID:19958200)
- Studies indicate that the interaction of alpha-Hb with AHSP involves surfaces normally employed in binding to beta-Hb. (PMID:20036801)
- Identification and molecular characterization of the –CAMPANIA deletion, a novel alpha degrees -thalassemic defect, in two unrelated Italian families. (PMID:20054848)
- We report four novel and five uncommon deletions that remove alpha-globin distal regulatory elements and/or the complete alpha-globin gene cluster. One of them occurred de novo and removes all HSs except HS-10, while other eliminates only the HS-40 site. (PMID:20580289)
- One hundred and ninety-one (53.3%) patients were diagnosed with HbH-Constant Spring, 19 were diagnosed with HbH Westmead in Guangxi province, China (PMID:20639625)
Cross-species orthologs
9 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | hbae4 | ENSDARG00000045144 |
| mus_musculus | Hba-a2 | ENSMUSG00000069917 |
| mus_musculus | Hba-a1 | ENSMUSG00000069919 |
| rattus_norvegicus | Hba-a2 | ENSRNOG00000029886 |
| rattus_norvegicus | Hba-a3 | ENSRNOG00000047321 |
| rattus_norvegicus | Hba-a3 | ENSRNOG00000088611 |
| drosophila_melanogaster | glob1 | FBGN0027657 |
| caenorhabditis_elegans | WBGENE00008996 | |
| caenorhabditis_elegans | WBGENE00077763 |
Paralogs (11): HBQ1 (ENSG00000086506), HBZ (ENSG00000130656), CYGB (ENSG00000161544), HBG2 (ENSG00000196565), MB (ENSG00000198125), HBA1 (ENSG00000206172), HBM (ENSG00000206177), HBE1 (ENSG00000213931), HBG1 (ENSG00000213934), HBD (ENSG00000223609), HBB (ENSG00000244734)
Protein
Protein identifiers
Hemoglobin subunit alpha — P69905 (reviewed: P69905)
Alternative names: Alpha-globin, Hemoglobin alpha chain
All UniProt accessions (4): A0A2R8Y7C0, D1MGQ2, G3V1N2, P69905
UniProt curated annotations — full annotation on UniProt →
Function. Involved in oxygen transport from the lung to the various peripheral tissues. Hemopressin acts as an antagonist peptide of the cannabinoid receptor CNR1. Hemopressin-binding efficiently blocks cannabinoid receptor CNR1 and subsequent signaling.
Subunit / interactions. Heterotetramer of two alpha chains and two beta chains in adult hemoglobin A (HbA); two alpha chains and two delta chains in adult hemoglobin A2 (HbA2); two alpha chains and two epsilon chains in early embryonic hemoglobin Gower-2; two alpha chains and two gamma chains in fetal hemoglobin F (HbF). (Microbial infection) Interacts with Staphylococcus aureus protein isdB.
Tissue specificity. Red blood cells.
Post-translational modifications. The initiator Met is not cleaved in variant Thionville and is acetylated.
Disease relevance. Heinz body anemias (HEIBAN) [MIM:140700] Form of non-spherocytic hemolytic anemia of Dacie type 1. After splenectomy, which has little benefit, basophilic inclusions called Heinz bodies are demonstrable in the erythrocytes. Before splenectomy, diffuse or punctate basophilia may be evident. Most of these cases are probably instances of hemoglobinopathy. The hemoglobin demonstrates heat lability. Heinz bodies are observed also with the Ivemark syndrome (asplenia with cardiovascular anomalies) and with glutathione peroxidase deficiency. The disease may be caused by variants affecting the gene represented in this entry. Alpha-thalassemia (A-THAL) [MIM:604131] A form of thalassemia. Thalassemias are common monogenic diseases occurring mostly in Mediterranean and Southeast Asian populations. The hallmark of alpha-thalassemia is an imbalance in globin-chain production in the adult HbA molecule. The level of alpha chain production can range from none to very nearly normal levels. Deletion of both copies of each of the two alpha-globin genes causes alpha(0)-thalassemia, also known as homozygous alpha thalassemia. Due to the complete absence of alpha chains, the predominant fetal hemoglobin is a tetramer of gamma-chains (Bart hemoglobin) that has essentially no oxygen carrying capacity. This causes oxygen starvation in the fetal tissues leading to prenatal lethality or early neonatal death. The loss of two alpha genes results in mild alpha-thalassemia, also known as heterozygous alpha-thalassemia. Affected individuals have small red cells and a mild anemia (microcytosis). If three of the four alpha-globin genes are functional, individuals are completely asymptomatic. Some rare forms of alpha-thalassemia are due to point mutations (non-deletional alpha-thalassemia). The disease is caused by variants affecting the gene represented in this entry. Alpha(0)-thalassemia is associated with non-immune hydrops fetalis, a generalized edema of the fetus with fluid accumulation in the body cavities due to non-immune causes. Non-immune hydrops fetalis is not a diagnosis in itself but a symptom, a feature of many genetic disorders, and the end-stage of a wide variety of disorders. Hemoglobin H disease (HBH) [MIM:613978] A form of alpha-thalassemia due to the loss of three alpha genes. This results in high levels of a tetramer of four beta chains (hemoglobin H), causing a severe and life-threatening anemia. Untreated, most patients die in childhood or early adolescence. The disease is caused by variants affecting the gene represented in this entry.
Miscellaneous. Gives blood its red color.
Similarity. Belongs to the globin family.
RefSeq proteins (1): NP_000508* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000971 | Globin | Domain |
| IPR002338 | Hemoglobin_a-typ | Family |
| IPR002339 | Hemoglobin_pi | Family |
| IPR009050 | Globin-like_sf | Homologous_superfamily |
| IPR012292 | Globin/Proto | Homologous_superfamily |
| IPR050056 | Hemoglobin_oxygen_transport | Family |
Pfam: PF00042
UniProt features (213 total): sequence variant 151, site 19, modified residue 17, helix 10, glycosylation site 4, turn 3, strand 2, binding site 2, initiator methionine 1, chain 1, sequence conflict 1, peptide 1, domain 1
Structure
Experimental structures (PDB)
356 structures, top 30 by resolution.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 2W72 | X-RAY DIFFRACTION | 1.07 |
| 1IRD | X-RAY DIFFRACTION | 1.25 |
| 2DN1 | X-RAY DIFFRACTION | 1.25 |
| 2DN2 | X-RAY DIFFRACTION | 1.25 |
| 2DN3 | X-RAY DIFFRACTION | 1.25 |
| 7DY4 | X-RAY DIFFRACTION | 1.3 |
| 6KA9 | X-RAY DIFFRACTION | 1.4 |
| 6KAO | X-RAY DIFFRACTION | 1.4 |
| 6LCW | X-RAY DIFFRACTION | 1.4 |
| 6LCX | X-RAY DIFFRACTION | 1.4 |
| 7DY3 | X-RAY DIFFRACTION | 1.4 |
| 3S66 | X-RAY DIFFRACTION | 1.4 |
| 1J40 | X-RAY DIFFRACTION | 1.45 |
| 1J41 | X-RAY DIFFRACTION | 1.45 |
| 2D5Z | X-RAY DIFFRACTION | 1.45 |
| 6KAE | X-RAY DIFFRACTION | 1.45 |
| 6KAH | X-RAY DIFFRACTION | 1.45 |
| 6KAI | X-RAY DIFFRACTION | 1.45 |
| 6KAP | X-RAY DIFFRACTION | 1.45 |
| 6L5V | X-RAY DIFFRACTION | 1.45 |
| 7JY3 | X-RAY DIFFRACTION | 1.48 |
| 1BAB | X-RAY DIFFRACTION | 1.5 |
| 1BZ0 | X-RAY DIFFRACTION | 1.5 |
| 1THB | X-RAY DIFFRACTION | 1.5 |
| 1UIW | X-RAY DIFFRACTION | 1.5 |
| 6KAQ | X-RAY DIFFRACTION | 1.5 |
| 6L5W | X-RAY DIFFRACTION | 1.5 |
| 9HBA | X-RAY DIFFRACTION | 1.51 |
| 5WOG | X-RAY DIFFRACTION | 1.54 |
| 1J3Y | X-RAY DIFFRACTION | 1.55 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P69905-F1 | 98.04 | 0.99 |
Antibody-complex structures (SAbDab): 1 — 8VYL
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (19): 30–31 ((microbial infection) cleavage; by n.americanus apr-2); 46–47 ((microbial infection) cleavage; by n.americanus apr-2); 48–49 ((microbial infection) cleavage; by n.americanus apr-2); 53–54 ((microbial infection) cleavage; by n.americanus apr-2); 56–57 ((microbial infection) cleavage; by n.americanus apr-2); 57 (not glycated); 60–61 ((microbial infection) cleavage; by n.americanus apr-2); 61 (not glycated); 91 (not glycated); 92–93 ((microbial infection) cleavage; by n.americanus apr-2); 100 (not glycated); 107–108 ((microbial infection) cleavage; by n.americanus apr-2) …
Ligand- & substrate-binding residues (2): 59; 88 (proximal binding residue)
Post-translational modifications (17): 4, 8, 9, 12, 17, 17, 25, 36, 41, 50, 103, 109, 125, 132, 135, 138, 139
Glycosylation sites (4): 8, 17, 41, 62
Function
Pathways and Gene Ontology
Reactome pathways
6 pathways
| ID | Pathway |
|---|---|
| R-HSA-1237044 | Erythrocytes take up carbon dioxide and release oxygen |
| R-HSA-1247673 | Erythrocytes take up oxygen and release carbon dioxide |
| R-HSA-2168880 | Scavenging of heme from plasma |
| R-HSA-9707564 | Cytoprotection by HMOX1 |
| R-HSA-9707616 | Heme signaling |
| R-HSA-9927020 | Heme assimilation |
MSigDB gene sets: 297 (showing top):
GOBP_MYELOID_CELL_DIFFERENTIATION, BENPORATH_ES_WITH_H3K27ME3, GOBP_MYELOID_CELL_HOMEOSTASIS, GOBP_MYELOID_CELL_DEVELOPMENT, GOBP_INFLAMMATORY_RESPONSE, GOBP_HYDROGEN_PEROXIDE_CATABOLIC_PROCESS, GOBP_ERYTHROCYTE_HOMEOSTASIS, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_UP, MODULE_128, JOHANSSON_GLIOMAGENESIS_BY_PDGFB_DN, HUMMERICH_MALIGNANT_SKIN_TUMOR_UP, GOBP_CELLULAR_RESPONSE_TO_TOXIC_SUBSTANCE, GOBP_ONE_CARBON_COMPOUND_TRANSPORT, GOBP_GAS_TRANSPORT, MODULE_171
GO Biological Process (8): inflammatory response (GO:0006954), carbon dioxide transport (GO:0015670), oxygen transport (GO:0015671), nitric oxide transport (GO:0030185), response to hydrogen peroxide (GO:0042542), hydrogen peroxide catabolic process (GO:0042744), erythrocyte development (GO:0048821), cellular oxidant detoxification (GO:0098869)
GO Molecular Function (8): oxygen carrier activity (GO:0005344), iron ion binding (GO:0005506), oxygen binding (GO:0019825), heme binding (GO:0020037), peroxidase activity (GO:0004601), protein binding (GO:0005515), haptoglobin binding (GO:0031720), metal ion binding (GO:0046872)
GO Cellular Component (9): extracellular region (GO:0005576), obsolete extracellular space (GO:0005615), cytosol (GO:0005829), hemoglobin complex (GO:0005833), membrane (GO:0016020), haptoglobin-hemoglobin complex (GO:0031838), extracellular exosome (GO:0070062), endocytic vesicle lumen (GO:0071682), blood microparticle (GO:0072562)
Reactome top-level categories
Rollup of top-5 pathways:
| Category | Pathways |
|---|---|
| O2/CO2 exchange in erythrocytes | 2 |
| Binding and Uptake of Ligands by Scavenger Receptors | 1 |
| Cellular response to chemical stress | 1 |
| Cellular responses to stress | 1 |
| Metal ion assimilation from the host | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| gas transport | 2 |
| protein-containing complex | 2 |
| defense response | 1 |
| one-carbon compound transport | 1 |
| nitrogen compound transport | 1 |
| response to reactive oxygen species | 1 |
| catabolic process | 1 |
| hydrogen peroxide metabolic process | 1 |
| erythrocyte differentiation | 1 |
| myeloid cell development | 1 |
| cellular detoxification | 1 |
| oxygen transport | 1 |
| oxygen binding | 1 |
| molecular carrier activity | 1 |
| transition metal ion binding | 1 |
| small molecule binding | 1 |
| tetrapyrrole binding | 1 |
| antioxidant activity | 1 |
| oxidoreductase activity, acting on peroxide as acceptor | 1 |
| binding | 1 |
| protein binding | 1 |
| cation binding | 1 |
| cytoplasm | 1 |
| cytosol | 1 |
| extracellular vesicle | 1 |
| endocytic vesicle | 1 |
| intracellular organelle lumen | 1 |
| extracellular region | 1 |
Protein interactions and networks
STRING
0 interactions, top by confidence (×1000):
IntAct
212 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| HBB | HBA1 | psi-mi:“MI:0407”(direct interaction) | 0.970 |
| HBA1 | HBB | psi-mi:“MI:0407”(direct interaction) | 0.970 |
| HBA1 | HBB | psi-mi:“MI:2364”(proximity) | 0.970 |
| HBA1 | HBB | psi-mi:“MI:0915”(physical association) | 0.970 |
| HBB | HBA1 | psi-mi:“MI:0915”(physical association) | 0.970 |
| HBB | HBA1 | psi-mi:“MI:2364”(proximity) | 0.970 |
| UBE2V1 | UBE2N | psi-mi:“MI:0914”(association) | 0.910 |
| MED4 | MED19 | psi-mi:“MI:0914”(association) | 0.900 |
BioGRID (222): KRT40 (Two-hybrid), CCDC57 (Two-hybrid), HBA1 (Affinity Capture-MS), HBA2 (Affinity Capture-MS), HBA1 (Affinity Capture-MS), HBA2 (Affinity Capture-MS), HBA2 (Affinity Capture-MS), HBA2 (Affinity Capture-MS), HBA2 (Affinity Capture-MS), HBA2 (Affinity Capture-MS), HBA2 (Affinity Capture-MS), HBA2 (Affinity Capture-MS), HBA2 (Affinity Capture-MS), HBA2 (Affinity Capture-MS), HBA2 (Affinity Capture-MS)
ESM2 similar proteins: P01923, P01924, P01926, P01928, P01929, P01930, P01937, P01938, P01940, P01951, P01953, P01958, P01959, P01960, P01961, P01969, P06635, P07402, P07403, P07421, P08852, P09839, P09908, P10892, P18972, P19002, P20243, P20854, P21766, P21767, P21768, P23601, P24659, P28780, P63107, P63108, P67817, P67818, P69905, P69906
Diamond homologs: B3EWC7, B3EWC9, B3EWD1, B3EWD3, B3EWD5, B3EWD7, B3EWD9, B3EWE1, B3EWE3, D0VX09, P01923, P01924, P01926, P01928, P01929, P01930, P01933, P01934, P01935, P01936, P01937, P01938, P01939, P01940, P01941, P01942, P01943, P01945, P01948, P01951, P01953, P01956, P01958, P01962, P01963, P01968, P06635, P07402, P07403, P07421
SIGNOR signaling
29 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| HBA1 | “up-regulates activity” | CD163 | binding |
| HBA1 | “down-regulates activity” | ADAMTS13 | |
| HBA1 | “down-regulates activity” | AHSP | |
| HBA1 | “up-regulates quantity by expression” | TNF | “transcriptional regulation” |
| HBA1 | “up-regulates quantity by stabilization” | APOB | |
| HBA1 | “up-regulates activity” | CYP2E1 | |
| HBA1 | “down-regulates activity” | EDN1 | |
| ACVR1B | “up-regulates quantity by stabilization” | HBA1 | |
| AHSP | “up-regulates quantity by stabilization” | HBA1 | binding |
| ARSA | “up-regulates activity” | HBA1 | acetylation |
| EIF2AK1 | “down-regulates quantity by repression” | HBA1 | “transcriptional regulation” |
| EPAS1 | “up-regulates quantity by expression” | HBA1 | “transcriptional regulation” |
| ETV6 | “up-regulates quantity by expression” | HBA1 | “transcriptional regulation” |
| FGF2 | “down-regulates quantity by repression” | HBA1 | “transcriptional regulation” |
| TGFB1 | “up-regulates quantity by expression” | HBA1 | “transcriptional regulation” |
| HMOX1 | “down-regulates activity” | HBA1 | |
| HMOX2 | “down-regulates activity” | HBA1 | |
| HP | “down-regulates quantity” | HBA1 | binding |
| MIF | “down-regulates quantity by repression” | HBA1 | “transcriptional regulation” |
| MAPK11 | “up-regulates quantity by expression” | HBA1 | “transcriptional regulation” |
| MAPK14 | “up-regulates quantity by expression” | HBA1 | “transcriptional regulation” |
| heme | “up-regulates activity” | HBA1 | “chemical activation” |
| HBA1 | “form complex” | Hemoglobin | binding |
| HOXB6 | “down-regulates quantity by repression” | HBA1 | “transcriptional regulation” |
| EGF | “up-regulates quantity by expression” | HBA1 | “transcriptional regulation” |
| EPO | “up-regulates quantity by expression” | HBA1 | “transcriptional regulation” |
| STAT5A | “up-regulates quantity by expression” | HBA1 | “transcriptional regulation” |
| CPM | “down-regulates activity” | HBA1 | cleavage |
| CPN1 | “down-regulates activity” | HBA1 | cleavage |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 198 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Post-translational protein phosphorylation | 10 | 7.9× | 4e-04 |
| Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs) | 10 | 6.8× | 8e-04 |
| Platelet degranulation | 9 | 6.2× | 3e-03 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| oxygen transport | 6 | 35.5× | 1e-05 |
| erythrocyte development | 6 | 17.8× | 4e-04 |
| protein folding | 10 | 5.8× | 3e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
360 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 45 |
| Likely pathogenic | 80 |
| Uncertain significance | 111 |
| Likely benign | 38 |
| Benign | 9 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1072684 | NC_000016.9:g.(?163493)(163851_?)del | Pathogenic |
| 1072685 | NC_000016.9:g.(?163493)(193701_?)del | Pathogenic |
| 1098491 | NM_000517.6(HBA2):c.210_211insT (p.Val71fs) | Pathogenic |
| 1330041 | NM_000517.6(HBA2):c.283G>A (p.Asp95Asn) | Pathogenic |
| 15626 | NM_000517.4(HBA2):c.427T>A (p.Ter143Lys) | Pathogenic |
| 15630 | NM_000517.6(HBA2):c.377T>C (p.Leu126Pro) | Pathogenic |
| 15643 | NM_000517.6(HBA2):c.2T>C (p.Met1Thr) | Pathogenic |
| 15651 | NM_000517.6(HBA2):c.89T>C (p.Leu30Pro) | Pathogenic |
| 15652 | NM_000517.4(HBA2):c.429A>T (p.Ter143Tyr) | Pathogenic |
| 15657 | NM_000517.6(HBA2):c.118_124delinsTACTTC (p.Thr40fs) | Pathogenic |
| 15678 | NM_000517.6(HBA2):c.96G>Y (p.Arg32Ser) | Pathogenic |
| 15679 | NM_000517.6(HBA2):c.96-2A>G | Pathogenic |
| 15692 | NM_000517.6(HBA2):c.2del (p.Met1fs) | Pathogenic |
| 2428504 | NM_000517.6(HBA2):c.130T>G (p.Phe44Val) | Pathogenic |
| 2628369 | NM_000517.6(HBA2):c.320T>G (p.Leu107Arg) | Pathogenic |
| 2691625 | NM_000517.6(HBA2):c.389T>C (p.Leu130Pro) | Pathogenic |
| 280127 | NM_000517.6(HBA2):c.60del (p.His21fs) | Pathogenic |
| 2921026 | NM_000517.6(HBA2):c.95+1G>C | Pathogenic |
| 3346945 | NM_000517.6(HBA2):c.175C>T (p.His59Tyr) | Pathogenic |
| 3385101 | NM_000517.6(HBA2):c.428A>T (p.Ter143Leu) | Pathogenic |
| 375746 | NM_000517.6(HBA2):c.95+2_95+6del | Pathogenic |
| 375752 | Single allele | Pathogenic |
| 3766787 | NM_000517.6(HBA2):c.275T>C (p.Leu92Pro) | Pathogenic |
| 3893268 | NC_000016.10:g.169818_174075del | Pathogenic |
| 4069082 | NM_000517.6(HBA2):c.163del (p.Gln55fs) | Pathogenic |
| 439112 | NM_000517.6(HBA2):c.179G>A (p.Gly60Asp) | Pathogenic |
| 439117 | NM_000517.6(HBA2):c.379G>T (p.Asp127Tyr) | Pathogenic |
| 439126 | NM_000517.6(HBA2):c.95+1G>A | Pathogenic |
| 4818622 | NM_000517.6(HBA2):c.131del (p.Phe44fs) | Pathogenic |
| 4818680 | NM_000517.6(HBA2):c.95+2T>C | Pathogenic |
SpliceAI
188 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 16:173121:GCA:G | acceptor_loss | 1.0000 |
| 16:173122:CA:C | acceptor_loss | 1.0000 |
| 16:173123:A:AG | acceptor_gain | 1.0000 |
| 16:173123:AG:A | acceptor_gain | 1.0000 |
| 16:173123:AGGAT:A | acceptor_gain | 1.0000 |
| 16:173124:G:GT | acceptor_gain | 1.0000 |
| 16:173124:GG:G | acceptor_gain | 1.0000 |
| 16:173124:GGA:G | acceptor_gain | 1.0000 |
| 16:173124:GGAT:G | acceptor_gain | 1.0000 |
| 16:173124:GGATG:G | acceptor_gain | 1.0000 |
| 16:173325:TCAAG:T | donor_gain | 1.0000 |
| 16:173327:AAG:A | donor_gain | 1.0000 |
| 16:173327:AAGG:A | donor_loss | 1.0000 |
| 16:173328:AG:A | donor_gain | 1.0000 |
| 16:173328:AGGT:A | donor_loss | 1.0000 |
| 16:173329:GG:G | donor_gain | 1.0000 |
| 16:173329:GGTG:G | donor_loss | 1.0000 |
| 16:173330:G:GG | donor_gain | 1.0000 |
| 16:173330:GTG:G | donor_loss | 1.0000 |
| 16:173004:AGAG:A | donor_loss | 0.9900 |
| 16:173005:GAG:G | donor_gain | 0.9900 |
| 16:173008:G:A | donor_loss | 0.9900 |
| 16:173009:T:A | donor_loss | 0.9900 |
| 16:173331:T:A | donor_loss | 0.9900 |
| 16:173467:CACA:C | acceptor_loss | 0.9900 |
| 16:173468:ACAG:A | acceptor_loss | 0.9900 |
| 16:173470:A:AG | acceptor_gain | 0.9900 |
| 16:173470:A:AT | acceptor_loss | 0.9900 |
| 16:173471:G:GG | acceptor_gain | 0.9900 |
| 16:173471:GCTC:G | acceptor_gain | 0.9900 |
AlphaMissense
921 scored. Top likely-pathogenic:
dbSNP variants (sampled 300 via entrez): RS1002853503 (16:171579 G>A), RS1002884187 (16:171754 C>A,T), RS1003188977 (16:171354 T>C), RS1003598942 (16:173976 G>A,T), RS1004457469 (16:173118 C>T), RS1006988959 (16:171340 C>T), RS1007250809 (16:172083 A>G), RS1011492588 (16:171772 C>G,T), RS1016913082 (16:171131 A>C,G), RS1016987803 (16:171342 C>G,T), RS1017213698 (16:171824 A>T), RS1021488578 (16:171778 C>T), RS1023128758 (16:174078 G>C,T), RS1025568221 (16:171160 T>C), RS1025977498 (16:173046 C>G,T)
Disease associations
OMIM: gene MIM:141850 | disease phenotypes: MIM:140700, MIM:604131, MIM:613978, MIM:617981, MIM:236750
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| erythrocytosis, familial, 7 | Strong | Autosomal dominant |
| Heinz body anemia | Strong | Autosomal dominant |
| alpha thalassemia spectrum | Strong | Autosomal recessive |
| Hb Bart’s hydrops fetalis | Supportive | Autosomal recessive |
| hemoglobin M disease | Supportive | Autosomal dominant |
| hemoglobin H disease | Supportive | Autosomal recessive |
ClinGen Gene-Disease Validity (4)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| methemoglobinemia, alpha type | Limited | AD |
| erythrocytosis, familial, 7 | Limited | AD |
| HBA2-related alpha thalassemia spectrum | Definitive | AR |
| unstable hemoglobin disease | Limited | AD |
Mondo (9): Heinz body anemia (MONDO:0007705), alpha thalassemia spectrum (MONDO:0011399), hemoglobin H disease (MONDO:0013512), erythrocytosis, familial, 7 (MONDO:0054802), beta thalassemia (MONDO:0019402), thalassemia (MONDO:0000984), non-immune hydrops fetalis (MONDO:0009369), Hb Bart’s hydrops fetalis (MONDO:0015579), hemoglobin M disease (MONDO:0018023)
Orphanet (5): OBSOLETE: Heinz body anemia (Orphanet:178330), Alpha-thalassemia (Orphanet:846), Hemoglobin H disease (Orphanet:93616), Beta-thalassemia (Orphanet:848), Non-immune hydrops fetalis (Orphanet:363999)
HPO phenotypes
54 total (30 of 54 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000028 | Cryptorchidism |
| HP:0000047 | Hypospadias |
| HP:0000218 | High palate |
| HP:0000238 | Hydrocephalus |
| HP:0000252 | Microcephaly |
| HP:0000272 | Malar flattening |
| HP:0000278 | Retrognathia |
| HP:0000286 | Epicanthus |
| HP:0000316 | Hypertelorism |
| HP:0000337 | Broad forehead |
| HP:0000347 | Micrognathia |
| HP:0000348 | High forehead |
| HP:0000358 | Posteriorly rotated ears |
| HP:0000431 | Wide nasal bridge |
| HP:0000470 | Short neck |
| HP:0000494 | Downslanted palpebral fissures |
| HP:0000768 | Pectus carinatum |
| HP:0000978 | Bruising susceptibility |
| HP:0000980 | Pallor |
| HP:0001249 | Intellectual disability |
| HP:0001252 | Hypotonia |
| HP:0001371 | Flexion contracture |
| HP:0001508 | Failure to thrive |
| HP:0001561 | Polyhydramnios |
| HP:0001562 | Oligohydramnios |
| HP:0001635 | Congestive heart failure |
| HP:0001701 | Pericarditis |
| HP:0001744 | Splenomegaly |
| HP:0001762 | Talipes equinovarus |
GWAS associations
26 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000587_1 | Mean corpuscular hemoglobin | 3.000000e-09 |
| GCST003122_1 | Hemoglobin levels | 6.000000e-18 |
| GCST004334_1 | Mean corpuscular hemoglobin | 3.000000e-12 |
| GCST004611_207 | High light scatter reticulocyte count | 2.000000e-18 |
| GCST004612_198 | High light scatter reticulocyte percentage of red cells | 2.000000e-24 |
| GCST004619_16 | Reticulocyte fraction of red cells | 1.000000e-30 |
| GCST004621_81 | Red cell distribution width | 4.000000e-16 |
| GCST004622_36 | Reticulocyte count | 2.000000e-20 |
| GCST005951_12 | Body mass index | 5.000000e-11 |
| GCST008034_20 | Hemoglobin A1c levels | 8.000000e-12 |
| GCST008034_9 | Hemoglobin A1c levels | 3.000000e-12 |
| GCST008038_1 | Mean corpuscular hemoglobin concentration | 3.000000e-78 |
| GCST012126_11 | hemolysis of donated blood (osmotic) | 5.000000e-08 |
| GCST012130_3 | hemolysis of donated blood (osmotic) | 3.000000e-14 |
| GCST012131_2 | hemolysis of donated blood (osmotic) | 1.000000e-12 |
| GCST012135_11 | hemolysis of donated blood (osmotic) | 3.000000e-14 |
| GCST90002385_67 | High light scatter reticulocyte count | 2.000000e-16 |
| GCST90002386_605 | High light scatter reticulocyte percentage of red cells | 2.000000e-16 |
| GCST90002386_607 | High light scatter reticulocyte percentage of red cells | 5.000000e-19 |
| GCST90002390_627 | Mean corpuscular hemoglobin | 9.000000e-41 |
| GCST90002390_629 | Mean corpuscular hemoglobin | 5.000000e-14 |
| GCST90002391_158 | Mean corpuscular hemoglobin concentration | 1.000000e-10 |
| GCST90002392_475 | Mean corpuscular volume | 1.000000e-09 |
| GCST90002405_349 | Reticulocyte count | 2.000000e-14 |
| GCST90002405_351 | Reticulocyte count | 2.000000e-18 |
| GCST90002406_401 | Reticulocyte fraction of red cells | 2.000000e-23 |
EFO canonical traits (9, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004509 | hemoglobin measurement |
| EFO:0004527 | mean corpuscular hemoglobin |
| EFO:0007629 | hemoglobin A1 measurement |
| EFO:0007986 | reticulocyte count |
| EFO:0009188 | Red cell distribution width |
| EFO:0004340 | body mass index |
| EFO:0004541 | HbA1c measurement |
| EFO:0004528 | mean corpuscular hemoglobin concentration |
| EFO:0009473 | hemolysis |
MeSH disease descriptors (5)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D013789 | Thalassemia | C15.378.050.141.150.875; C15.378.420.826; C16.320.070.875; C16.320.365.826 |
| D017085 | alpha-Thalassemia | C15.378.050.141.150.875.100; C15.378.420.826.100; C16.320.070.875.100; C16.320.365.826.100 |
| D017086 | beta-Thalassemia | C15.378.050.141.150.875.150; C15.378.420.826.150; C16.320.070.875.150; C16.320.365.826.150 |
| C563030 | Heinz Body Anemias (supp.) | |
| C581942 | Hemoglobin M Disease (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL2095168 (PROTEIN COMPLEX), CHEMBL2887 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
44 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | affects methylation, affects cotreatment, increases expression | 2 |
| Cadmium | increases palmitoylation, affects binding, decreases reaction, increases abundance | 2 |
| Tobacco Smoke Pollution | affects expression, increases expression | 2 |
| Cadmium Chloride | decreases reaction, increases abundance, increases palmitoylation, decreases expression | 2 |
| fluorene-9-bisphenol | decreases expression | 1 |
| methylmercuric chloride | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| propionaldehyde | increases expression | 1 |
| 4-(N-methyl-N-nitrosamino)-1-(3-pyridyl)-1-butanone | affects cotreatment, increases expression | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | decreases expression | 1 |
| sodium arsenite | increases expression | 1 |
| butyraldehyde | increases expression | 1 |
| 2-bromopalmitate | decreases reaction, increases abundance, increases palmitoylation | 1 |
| pentanal | increases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| tebuconazole | decreases expression | 1 |
| JP8 aviation fuel | decreases expression | 1 |
| deguelin | increases expression | 1 |
| corosolic acid | increases expression | 1 |
| 4-chloro-N-((4-(1,1-dimethylethyl)phenyl)methyl)-3-ethyl-1-methyl-1H-pyrazole-5-carboxamide | increases expression | 1 |
| pyrimidifen | increases expression | 1 |
| pyrachlostrobin | increases expression | 1 |
| picoxystrobin | increases expression | 1 |
| Capecitabine | decreases expression | 1 |
| Acetaminophen | increases expression | 1 |
| Aldehydes | increases expression | 1 |
| Antimycin A | increases expression | 1 |
| Copper | affects binding | 1 |
| Diethylhexyl Phthalate | increases expression | 1 |
| Doxorubicin | decreases expression | 1 |
ChEMBL screening assays
59 unique, capped per target: 46 binding, 13 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3136831 | Binding | Binding affinity to Hemoglobin (unknown origin) at 10 mM by circular dichroism spectroscopy | Synthesis of amphiphilic, chalcogen-based redox modulators with in vitro cytotoxic activity against cancer cells, macrophages and microbes — Medchemcomm |
| CHEMBL810680 | Functional | Affinity towards oxygen by hemoglobin after modification by compound | Regioselective covalent modification of hemoglobin in search of antisickling agents. — J Med Chem |
Cellosaurus cell lines
11 cell lines: 9 induced pluripotent stem cell, 2 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_A1BY | HNMUi002-A | Induced pluripotent stem cell | Male |
| CVCL_A1CA | HNMUi004-A | Induced pluripotent stem cell | Male |
| CVCL_A1CB | HNMUi005-A | Induced pluripotent stem cell | Male |
| CVCL_A1CD | HNMUi007-A | Induced pluripotent stem cell | Male |
| CVCL_A7GC | GZHMCi007-A | Induced pluripotent stem cell | Male |
| CVCL_B7E8 | MUi034-A | Induced pluripotent stem cell | Female |
| CVCL_E4G8 | SU-iPS-1 | Induced pluripotent stem cell | Male |
| CVCL_E4G9 | C-SU-iPS-1 | Induced pluripotent stem cell | Male |
| CVCL_F1VY | DUK66652 | Transformed cell line | Sex unspecified |
| CVCL_F1W0 | DUK71006 | Transformed cell line | Sex unspecified |
Clinical trials (associated diseases)
237 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00103753 | PHASE4 | UNKNOWN | Combined Chelation Treatment With Deferiprone and Deferoxamine in Thalassemia Major |
| NCT00564941 | PHASE4 | COMPLETED | Evaluating the Efficacy of Deferasirox in Transfusion Dependent Chronic Anaemias (Myelodysplastic Syndrome, Beta-thalassaemia Patients) With Chronic Iron Overload |
| NCT00733811 | PHASE4 | COMPLETED | Efficacy Study of the Use of Sequential DFP-DFO Versus DFP |
| NCT03961828 | PHASE4 | COMPLETED | Hyalornic Acid Level in β-Thalassemic Children Treated for Hepatitis C Virus |
| NCT00346242 | PHASE4 | COMPLETED | Evaluation of Efficacy of Zoledronic Acid in Patients With Haemoglobin Syndromes (Thalassemia and Sicle Cell Anaemia) and Risk of Skeletal Events |
| NCT00707850 | PHASE4 | COMPLETED | Pegasys® Plus Ribavirin in Thalassemic Patients With Hepatitis C Virus Infection |
| NCT01250951 | PHASE4 | COMPLETED | This Study Will Evaluate Efficacy and Safety of Deferasirox in Patients With Myelodysplastic Syndromes (MDS), Thalassemia and Rare Anemia Types Having Transfusion-induced Iron Overload. |
| NCT02069886 | PHASE4 | WITHDRAWN | Effect of Deferasirox on Endocrine Complications in Subjects With Transfusion Dependent Thalassemia |
| NCT02386800 | PHASE4 | ACTIVE_NOT_RECRUITING | CINC424A2X01B Rollover Protocol |
| NCT03032666 | PHASE4 | COMPLETED | Sofosbuvir/Ledipasvir for Hepatitis C Genotype 1-6 in Patients With Transfusion-Dependent Thalassemia: An Open Label Trial |
| NCT03095326 | PHASE4 | COMPLETED | Pneumococcal Vaccination for Splenectomised Thalassemia Major Patients in Indonesia |
| NCT03117192 | PHASE4 | COMPLETED | Zinc Supplementation on Cellular Immunity in Thalassemia Major |
| NCT03374111 | PHASE4 | UNKNOWN | Colla Corii Asini Treating Anemia in Pregnant Women With Thalassemia(Presenting the Syndrome of Blood Deficiency) |
| NCT03392298 | PHASE4 | UNKNOWN | Study on the Mechanism of Colla Corri Asini in the Treatment of Thalassemia Patients With Pregnancy Anemia |
| NCT03402191 | PHASE4 | UNKNOWN | L-arginine Versus Sildenafil in Children With Beta Thalassemia Associated With Pulmonary Hypertension |
| NCT00061750 | PHASE3 | COMPLETED | Safety & Efficacy of ICL670 vs. Deferoxamine in Beta-thalassemia Patients With Iron Overload Due to Blood Transfusions |
| NCT00171171 | PHASE3 | COMPLETED | A Study of Long-term Treatment With Deferasirox in Patients With Beta-thalassemia and Transfusional Hemosiderosis |
| NCT02604433 | PHASE3 | COMPLETED | An Efficacy and Safety Study of Luspatercept (ACE-536) Versus Placebo in Adults Who Require Regular Red Blood Cell Transfusions Due to Beta (β) Thalassemia |
| NCT02906202 | PHASE3 | COMPLETED | A Study Evaluating the Efficacy and Safety of the LentiGlobin® BB305 Drug Product in Participants With Transfusion-Dependent β-Thalassemia, Who do Not Have a β0/β0 Genotype |
| NCT03207009 | PHASE3 | COMPLETED | A Study Evaluating the Efficacy and Safety of the LentiGlobin® BB305 Drug Product in Participants With Transfusion-Dependent β-Thalassemia |
| NCT04064060 | PHASE3 | RECRUITING | A Study to Evaluate Long-term Safety in Participants Who Have Participated in Other Luspatercept (ACE-536) Clinical Trials |
| NCT04208529 | PHASE3 | ENROLLING_BY_INVITATION | A Long-term Follow-up Study in Participants Who Received CTX001 |
| NCT05356195 | PHASE3 | ACTIVE_NOT_RECRUITING | Evaluation of Safety and Efficacy of CTX001 in Pediatric Participants With Transfusion-Dependent β-Thalassemia (TDT) |
| NCT05477563 | PHASE3 | RECRUITING | Evaluation of Efficacy and Safety of a Single Dose of CTX001 in Participants With Transfusion-Dependent β-Thalassemia and Severe Sickle Cell Disease |
| NCT07157722 | PHASE3 | NOT_YET_RECRUITING | Evaluating the Effect of N-Acetyl Cysteine and Alpha Lipoic Acid in Patients With Beta Thalassemia |
| NCT00235391 | PHASE3 | COMPLETED | Expanded Access of Deferasirox to Patients With Congenital Disorders of Red Blood Cells and Chronic Iron Overload |
| NCT01395199 | PHASE3 | COMPLETED | Amlodipine in the Prevention and Treatment of Iron Overload in Patients With Thalassemia Major |
| NCT06609226 | PHASE3 | RECRUITING | A Research Study Looking at Long-term Treatment With Etavopivat in People With Sickle Cell Disease or Thalassaemia |
| NCT00000588 | PHASE2 | COMPLETED | Chelation Therapy of Iron Overload With Pyridoxal Isonicotinoyl Hydrazone |
| NCT00000595 | PHASE2 | COMPLETED | Evaluation of Subcutaneous Desferrioxamine as Treatment for Transfusional Hemochromatosis |
| NCT00001958 | PHASE2 | COMPLETED | Hydroxyurea to Treat Beta-Thalassemia (Cooley’s Anemia) |
| NCT00005934 | PHASE2 | COMPLETED | 5-Azacytidine and Phenylbutyrate to Treat Severe Thalassemia |
| NCT00006136 | PHASE2 | COMPLETED | Phase II Study of Arginine Butyrate With or Without Epoetin Alfa in Patients With Thalassemia Intermedia |
| NCT00029380 | PHASE2 | COMPLETED | Cord Blood Transplantation for Sickle Cell Anemia and Thalassemia |
| NCT00061763 | PHASE2 | COMPLETED | Study of Deferasirox in Iron Overload From Beta-thalassemia Unable to be Treated With Deferoxamine or Chronic Anemias |
| NCT00115349 | PHASE2 | TERMINATED | Combination Therapy Compared With Single-Drug Therapy in Patients With Cardiac Diseases |
| NCT00408447 | PHASE2 | ACTIVE_NOT_RECRUITING | Stem Cell Transplant in Sickle Cell Disease and Thalassemia |
| NCT00447694 | PHASE2 | COMPLETED | Cardiac T2* in Beta-thalassemia Patients on Deferasirox Treatment |
| NCT01049854 | PHASE2 | COMPLETED | CD34+Selection for Partially Matched Family or Matched Unrelated Adult Donor Transplant |
| NCT01186419 | PHASE2 | COMPLETED | Safety and Pharmacodynamic Study of an Oral Iron Chelator Given for 6 Months to Patients With Iron Overload |
Related Atlas pages
- Associated diseases: erythrocytosis, familial, 7, Heinz body anemia, alpha thalassemia spectrum, Hb Bart’s hydrops fetalis, hemoglobin M disease, hemoglobin H disease, methemoglobinemia, alpha type, HBA2-related alpha thalassemia spectrum, unstable hemoglobin disease
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): alpha thalassemia spectrum, beta thalassemia, erythrocytosis, familial, 7, Hb Bart’s hydrops fetalis, Heinz body anemia, hemoglobin H disease, hemoglobin M disease, non-immune hydrops fetalis, thalassemia