HCAR1
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Also known as HCA1FKSG80TA-GPCRLACR1
Summary
HCAR1 (hydroxycarboxylic acid receptor 1, HGNC:4532) is a protein-coding gene on chromosome 12q24.31, encoding Hydroxycarboxylic acid receptor 1 (Q9BXC0). Acts as a receptor for L-lactate and mediates its anti-lipolytic effect through a G(i)-protein-mediated pathway.
G protein-coupled receptors (GPCRs, or GPRs), such as GPR81, contain 7 transmembrane domains and transduce extracellular signals through heterotrimeric G proteins.
Source: NCBI Gene 27198 — RefSeq curated summary.
At a glance
- GWAS associations: 53
- Clinical variants (ClinVar): 70 total
- Druggable target: yes
- MANE Select transcript:
NM_032554
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:4532 |
| Approved symbol | HCAR1 |
| Name | hydroxycarboxylic acid receptor 1 |
| Location | 12q24.31 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | HCA1, FKSG80, TA-GPCR, LACR1 |
| Ensembl gene | ENSG00000196917 |
| Ensembl biotype | protein_coding |
| OMIM | 606923 |
| Entrez | 27198 |
Gene structure
Transcript identifiers
Ensembl transcripts: 1 — 1 protein_coding
ENST00000432564
RefSeq mRNA: 1 — MANE Select: NM_032554
NM_032554
CCDS: CCDS9236
Canonical transcript exons
ENST00000432564 — 1 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001618531 | 122726076 | 122730844 |
Expression profiles
Bgee: expression breadth broad, 98 present calls, max score 77.85.
FANTOM5 (CAGE): breadth broad, TPM avg 0.5853 / max 23.6896, expressed in 221 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 133841 | 0.4569 | 201 |
| 133842 | 0.0738 | 42 |
| 133843 | 0.0546 | 14 |
Top tissues by expression
214 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 77.85 | gold quality |
| omental fat pad | UBERON:0010414 | 68.93 | gold quality |
| peritoneum | UBERON:0002358 | 68.85 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 67.38 | gold quality |
| spleen | UBERON:0002106 | 61.91 | gold quality |
| minor salivary gland | UBERON:0001830 | 59.84 | gold quality |
| body of stomach | UBERON:0001161 | 59.71 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 59.21 | gold quality |
| stromal cell of endometrium | CL:0002255 | 58.76 | gold quality |
| metanephros cortex | UBERON:0010533 | 58.34 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 58.31 | gold quality |
| adipose tissue | UBERON:0001013 | 58.19 | gold quality |
| saliva-secreting gland | UBERON:0001044 | 58.19 | gold quality |
| stomach | UBERON:0000945 | 57.42 | gold quality |
| mouth mucosa | UBERON:0003729 | 57.30 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 55.47 | gold quality |
| thyroid gland | UBERON:0002046 | 55.24 | gold quality |
| colonic epithelium | UBERON:0000397 | 54.59 | gold quality |
| ganglionic eminence | UBERON:0004023 | 53.46 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 53.31 | gold quality |
| cortex of kidney | UBERON:0001225 | 53.24 | gold quality |
| endocervix | UBERON:0000458 | 53.07 | gold quality |
| metanephros | UBERON:0000081 | 52.99 | gold quality |
| kidney | UBERON:0002113 | 51.13 | gold quality |
| fundus of stomach | UBERON:0001160 | 50.69 | gold quality |
| ectocervix | UBERON:0012249 | 50.65 | gold quality |
| cortical plate | UBERON:0005343 | 50.57 | gold quality |
| fallopian tube | UBERON:0003889 | 50.48 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 50.30 | gold quality |
| uterine cervix | UBERON:0000002 | 50.27 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 4.93 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): PPARG
miRNA regulators (miRDB)
56 targeting HCAR1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4510 | 100.00 | 66.60 | 2050 |
| HSA-MIR-6127 | 100.00 | 66.76 | 2188 |
| HSA-MIR-6129 | 100.00 | 66.46 | 2080 |
| HSA-MIR-6130 | 100.00 | 66.69 | 2012 |
| HSA-MIR-6133 | 100.00 | 66.48 | 2064 |
| HSA-MIR-150-5P | 99.99 | 66.69 | 1976 |
| HSA-MIR-520D-5P | 99.98 | 73.34 | 4883 |
| HSA-MIR-524-5P | 99.98 | 73.43 | 4882 |
| HSA-MIR-495-3P | 99.96 | 72.81 | 4197 |
| HSA-MIR-5688 | 99.96 | 73.23 | 4504 |
| HSA-MIR-6508-5P | 99.92 | 70.67 | 2465 |
| HSA-MIR-548E-5P | 99.89 | 72.73 | 4486 |
| HSA-MIR-8067 | 99.86 | 69.59 | 2260 |
| HSA-MIR-4422 | 99.72 | 72.07 | 2908 |
| HSA-MIR-548M | 99.70 | 68.87 | 1749 |
| HSA-MIR-5004-5P | 99.68 | 66.63 | 1294 |
| HSA-MIR-466 | 99.67 | 70.85 | 2863 |
| HSA-MIR-3679-3P | 99.64 | 69.88 | 1599 |
| HSA-MIR-1827 | 99.63 | 68.57 | 3265 |
| HSA-MIR-4516 | 99.61 | 67.78 | 3390 |
| HSA-MIR-141-5P | 99.57 | 67.86 | 897 |
| HSA-MIR-4672 | 99.50 | 71.58 | 2893 |
| HSA-MIR-5683 | 99.36 | 68.59 | 2083 |
| HSA-MIR-4652-3P | 99.33 | 70.02 | 2742 |
| HSA-MIR-2116-5P | 99.32 | 69.34 | 1273 |
| HSA-MIR-361-3P | 99.19 | 66.45 | 1381 |
| HSA-MIR-4520-2-3P | 99.14 | 69.28 | 1009 |
| HSA-MIR-6809-5P | 99.13 | 68.45 | 1223 |
| HSA-MIR-939-3P | 98.97 | 65.07 | 2347 |
| HSA-MIR-6770-5P | 98.97 | 66.76 | 1853 |
Literature-anchored findings (GeneRIF, showing 31)
- GPR81 with relatively restricted expression in the adipose tissues functions as a receptor for lactate and can mediate an anti-lipolytic effect of lactate. (PMID:18952058)
- Data show that the coordinated PPARgamma-mediated regulation of the GPR81, GPR109A and GPR109B presents a novel mechanism by which TZDs may reduce circulating free fatty acid levels and perhaps ameliorate insulin resistance in obese patients. (PMID:19633298)
- demonstrated that the C165-E166-S167-F168 motif at the second extracellular loop is critical for GPR81 function, and the conserved six Cys residues at the extracellular regions are necessary for GPR81 function (PMID:21862690)
- Description of a GPR81 selective agonist with in vivo efficacy, inhibiting lipolysis without flushing. (PMID:24486398)
- Lactate negatively regulates TLR induction of the NLRP3 inflammasome and production of IL1beta, via ARRB2 and GPR81 in liver and pancreatic injury. (PMID:24657625)
- Data support that GPR81 is important for cancer cell regulation of lactate transport mechanisms. (PMID:24928781)
- HCA1/3 are necessary for breast cancer cells to balance lipid/fatty acid metabolism. (PMID:25839160)
- HCAR1 and monocarboxylate transporters activity is required for the L- and D-lactate-mediated enhancement of DNA repair and of HeLa cell survival. (PMID:26208712)
- Findings identify GPR81 as a tumor-promoting receptor in breast cancer progression and suggest a novel mechanism that regulates GPR81-dependent activation of the PI3K/Akt signaling axis in tumor microenvironment. (PMID:27765922)
- Lactate receptor/HCAR1 expression in cervical carcinoma cells may contribute to the modulation of cellular DNA repair mechanisms. (PMID:28258841)
- Activation of GPR81 decreases intracellular cAMP levels and inhibits PKA activity, leading to activation of TAZ and upregulation of PD-L1. This study reveals a critical role for lactate in the immune checkpoint pathway and an unexpected function of TAZ in tumor evasion of the T-cell-mediated immune response. (PMID:28604752)
- The novel role of HCAR1 in development of chemoresistance in cervical carcinoma HeLa cells via ABCB1 transporter up-regulation. (PMID:29151072)
- Monocarboxylate transporters in cancer. (PMID:31395464)
- Activation of GPR81 can rescue oscillatory shear stress -induced reduced expression of the key atheroprotective transcription factor KLF2. (PMID:31444899)
- The transcriptional response of GPR81 to lactate is mediated by Signal transducer and activator of transcription 3 (STAT3). (PMID:31666207)
- The lactate receptor GPR81 promotes breast cancer growth via a paracrine mechanism involving antigen-presenting cells in the tumor microenvironment. (PMID:32071396)
- Effects of GPR81 silencing combined with cisplatin stimulation on biological function in hypopharyngeal squamous cell carcinoma. (PMID:32582969)
- Heterogeneous ozone effects on the DNA methylome of bronchial cells observed in a crossover study. (PMID:32978449)
- HCAR1/MCT1 Regulates Tumor Ferroptosis through the Lactate-Mediated AMPK-SCD1 Activity and Its Therapeutic Implications. (PMID:33296645)
- Rare and potentially pathogenic variants in hydroxycarboxylic acid receptor genes identified in breast cancer cases. (PMID:34852802)
- Transcriptomic and functional studies reveal miR-431-5p as a tumour suppressor in pancreatic ductal adenocarcinoma cells. (PMID:35182679)
- Activation of lactate receptor HCAR1 down-modulates neuronal activity in rodent and human brain tissue. (PMID:35240875)
- The lactate sensor GPR81 regulates glycolysis and tumor growth of breast cancer. (PMID:35428832)
- Lactate receptor HCAR1 regulates cell growth, metastasis and maintenance of cancerspecific energy metabolism in breast cancer cells. (PMID:35775372)
- Insights into the regulation of podocyte and glomerular function by lactate and its metabolic sensor G-protein-coupled receptor 81. (PMID:36084306)
- The lactate receptor GPR81 is predominantly expressed in type II human skeletal muscle fibers: potential for lactate autocrine signaling. (PMID:36622074)
- History and Function of the Lactate Receptor GPR81/HCAR1 in the Brain: A Putative Therapeutic Target for the Treatment of Cerebral Ischemia. (PMID:37391123)
- Activation of GPR81 aggravated intestinal ischemia/reperfusion injury-induced acute lung injury via HMGB1-mediated neutrophil extracellular traps formation. (PMID:37698122)
- High Glucose Levels Promote Switch to Synthetic Vascular Smooth Muscle Cells via Lactate/GPR81. (PMID:38334628)
- Lactate/Hydroxycarboxylic Acid Receptor 1 in Alzheimer’s Disease: Mechanisms and Therapeutic Implications-Exercise Perspective. (PMID:38427215)
- Immunohistochemical localization of HCA1 receptor in placenta in presence of fetal growth restriction. (PMID:38909565)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Hcar1 | ENSMUSG00000049241 |
| rattus_norvegicus | Hcar1 | ENSRNOG00000026661 |
Paralogs (15): GPR31 (ENSG00000120436), GPR42 (ENSG00000126251), FFAR2 (ENSG00000126262), FFAR1 (ENSG00000126266), OXER1 (ENSG00000162881), OXGR1 (ENSG00000165621), P2RY1 (ENSG00000169860), P2RY6 (ENSG00000171631), GPR82 (ENSG00000171657), P2RY2 (ENSG00000175591), HCAR2 (ENSG00000182782), FFAR3 (ENSG00000185897), P2RY4 (ENSG00000186912), SUCNR1 (ENSG00000198829), HCAR3 (ENSG00000255398)
Protein
Protein identifiers
Hydroxycarboxylic acid receptor 1 — Q9BXC0 (reviewed: Q9BXC0)
Alternative names: G-protein coupled receptor 104, G-protein coupled receptor 81
All UniProt accessions (2): A0A4Y1JWP1, Q9BXC0
UniProt curated annotations — full annotation on UniProt →
Function. Acts as a receptor for L-lactate and mediates its anti-lipolytic effect through a G(i)-protein-mediated pathway.
Subcellular location. Cell membrane.
Tissue specificity. Expressed abundantly in brown and white fat. It also detectable at lower levels in liver, kidney, skeletal muscle, brain and pituitary. Not detected in frontal, temporal and occipital lobes of the cortex, basal forebrain, caudate nucleus, nucleus accumbens and hippocampus.
Similarity. Belongs to the G-protein coupled receptor 1 family.
RefSeq proteins (1): NP_115943* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000276 | GPCR_Rhodpsn | Family |
| IPR017452 | GPCR_Rhodpsn_7TM | Domain |
| IPR051893 | HCARs | Family |
Pfam: PF00001
UniProt features (37 total): mutagenesis site 9, topological domain 8, transmembrane region 7, sequence conflict 5, disulfide bond 3, sequence variant 3, chain 1, glycosylation site 1
Structure
Experimental structures (PDB)
6 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 8Z8B | ELECTRON MICROSCOPY | 2.65 |
| 9KT9 | ELECTRON MICROSCOPY | 2.7 |
| 8Z87 | ELECTRON MICROSCOPY | 2.73 |
| 8Z8A | ELECTRON MICROSCOPY | 2.82 |
| 9IZD | ELECTRON MICROSCOPY | 3.16 |
| 9J8Z | ELECTRON MICROSCOPY | 3.36 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9BXC0-F1 | 80.83 | 0.50 |
Antibody-complex structures (SAbDab): 4 — 8Z8A, 8Z8B, 9J8Z, 9KT9
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Disulfide bonds (3): 6–157, 7–252, 88–165
Glycosylation sites (1): 3
Mutagenesis-validated functional residues (9):
| Position | Phenotype |
|---|---|
| 71 | greatly impairs the agonistic activity of chba. |
| 99 | diminishes the response to l-lactate. abolishes the agonistic activity of chba. |
| 166 | greatly impairs the agonistic activity of chba. |
| 168 | reduction in agonistic activity of chba. |
| 233 | diminishes the response to l-lactate. |
| 240 | diminishes the response to l-lactate. |
| 261 | greatly impairs the agonistic activity of chba. |
| 264 | reduction in agonistic activity of chba. |
| 267 | diminishes the response to l-lactate. |
Function
Pathways and Gene Ontology
Reactome pathways
2 pathways
| ID | Pathway |
|---|---|
| R-HSA-3296197 | Hydroxycarboxylic acid-binding receptors |
| R-HSA-418594 | G alpha (i) signalling events |
MSigDB gene sets: 62 (showing top):
GSE45365_CTRL_VS_MCMV_INFECTION_NK_CELL_UP, MODULE_571, GOBP_NEGATIVE_REGULATION_OF_LIPID_METABOLIC_PROCESS, BHATI_G2M_ARREST_BY_2METHOXYESTRADIOL_DN, MODULE_453, GOBP_ADENYLATE_CYCLASE_MODULATING_G_PROTEIN_COUPLED_RECEPTOR_SIGNALING_PATHWAY, GOBP_REGULATION_OF_LIPID_METABOLIC_PROCESS, GOBP_REGULATION_OF_CATABOLIC_PROCESS, GOBP_LIPID_METABOLIC_PROCESS, RYTTCCTG_ETS2_B, GOBP_ADENYLATE_CYCLASE_INHIBITING_G_PROTEIN_COUPLED_RECEPTOR_SIGNALING_PATHWAY, GOBP_NEGATIVE_REGULATION_OF_LIPID_CATABOLIC_PROCESS, GOBP_LIPID_CATABOLIC_PROCESS, GOBP_REGULATION_OF_LIPID_CATABOLIC_PROCESS, GOBP_NEGATIVE_REGULATION_OF_CATABOLIC_PROCESS
GO Biological Process (4): G protein-coupled receptor signaling pathway (GO:0007186), adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (GO:0007193), negative regulation of lipid catabolic process (GO:0050995), signal transduction (GO:0007165)
GO Molecular Function (1): G protein-coupled receptor activity (GO:0004930)
GO Cellular Component (2): plasma membrane (GO:0005886), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Class A/1 (Rhodopsin-like receptors) | 1 |
| GPCR downstream signalling | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| G protein-coupled receptor activity | 1 |
| signal transduction | 1 |
| adenylate cyclase-modulating G protein-coupled receptor signaling pathway | 1 |
| adenylate cyclase inhibitor activity | 1 |
| negative regulation of catabolic process | 1 |
| lipid catabolic process | 1 |
| negative regulation of lipid metabolic process | 1 |
| regulation of lipid catabolic process | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| transmembrane signaling receptor activity | 1 |
| G protein-coupled receptor signaling pathway | 1 |
| membrane | 1 |
| cell periphery | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
526 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| HCAR1 | DENR | O43583 | 839 |
| HCAR1 | SLC16A3 | O15427 | 602 |
| HCAR1 | FFAR4 | Q5NUL3 | 599 |
| HCAR1 | SLC16A4 | O15374 | 598 |
| HCAR1 | ARRB2 | P32121 | 573 |
| HCAR1 | SLC16A7 | O60669 | 569 |
| HCAR1 | GPR84 | Q9NQS5 | 527 |
| HCAR1 | SLC16A1 | P53985 | 514 |
| HCAR1 | GPR148 | Q8TDV2 | 507 |
| HCAR1 | FFAR2 | O15552 | 442 |
| HCAR1 | LDHA | P00338 | 416 |
| HCAR1 | OXGR1 | Q96P68 | 381 |
| HCAR1 | SLC16A14 | Q7RTX9 | 380 |
| HCAR1 | RPL27A | P46776 | 367 |
| HCAR1 | SLC5A12 | Q1EHB4 | 367 |
IntAct
9 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| HCAR1 | RAMP1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| RAMP2 | HCAR1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| HCAR1 | RAMP2 | psi-mi:“MI:0915”(physical association) | 0.400 |
| RAMP3 | HCAR1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| HCAR1 | psi-mi:“MI:0915”(physical association) | 0.370 | |
| ATG16L1 | psi-mi:“MI:0914”(association) | 0.350 | |
| HCAR1 | ATP2B4 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (6): HCAR1 (Synthetic Lethality), HCAR1 (Reconstituted Complex), CERS5 (Affinity Capture-MS), ATP2B4 (Affinity Capture-MS), SLC7A3 (Affinity Capture-MS), HCAR1 (Affinity Capture-RNA)
ESM2 similar proteins: A0A4W3GG95, A7YY44, B0F9W3, B0UXR0, B2GV46, B3G515, B5X337, E7FEL0, O00398, O46685, O70526, P21556, P25023, P25105, P25116, P26824, P30411, P30558, P32299, P43657, P46002, P46093, P49019, P50132, P56488, Q00991, Q15743, Q1JQB3, Q28642, Q3UFD7, Q4G072, Q4KLH9, Q61038, Q62035, Q80Z39, Q8BFQ3, Q8BFU7, Q8BLG2, Q8BMC0, Q8BUD0
Diamond homologs: A0A6I8PUB9, E9QJ73, F8VQN3, O00270, O09047, O42179, O55197, P21109, P25024, P25025, P35344, P35383, P41231, P41232, P46092, P49019, P55920, P97266, Q15722, Q16581, Q28003, Q28422, Q28519, Q28807, Q2KI97, Q2YEG0, Q5REI5, Q5YA25, Q6TAC8, Q80Z39, Q8C131, Q8CIM5, Q8SQ54, Q8TDS4, Q8TDS5, Q96G91, Q99PE3, Q9BXC0, Q9EP66, Q9JL21
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
70 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 69 |
| Likely benign | 0 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
79 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 12:122729667:C:CT | donor_gain | 0.9600 |
| 12:122729668:C:CT | donor_gain | 0.9200 |
| 12:122729274:T:TA | donor_gain | 0.6600 |
| 12:122729664:C:CT | donor_gain | 0.6600 |
| 12:122729666:A:AC | donor_gain | 0.5800 |
| 12:122730426:CCCAG:C | donor_gain | 0.5800 |
| 12:122729665:C:CT | donor_gain | 0.5700 |
| 12:122729102:T:C | donor_gain | 0.5200 |
| 12:122730425:A:AC | donor_gain | 0.5200 |
| 12:122730426:C:CC | donor_gain | 0.5200 |
| 12:122730448:TCATC:T | donor_gain | 0.5200 |
| 12:122730418:AGCAC:A | donor_loss | 0.5000 |
| 12:122730419:GCACT:G | donor_loss | 0.5000 |
| 12:122730420:CACT:C | donor_loss | 0.5000 |
| 12:122730421:AC:A | donor_loss | 0.5000 |
| 12:122730422:C:G | donor_loss | 0.5000 |
| 12:122730423:T:TA | donor_loss | 0.5000 |
| 12:122730424:C:CC | donor_loss | 0.5000 |
| 12:122730425:ACCCA:A | donor_loss | 0.5000 |
| 12:122730426:C:A | donor_loss | 0.5000 |
| 12:122729100:A:AC | donor_gain | 0.4800 |
| 12:122729101:C:CC | donor_gain | 0.4800 |
| 12:122729101:CTT:C | donor_gain | 0.4500 |
| 12:122730425:AC:A | donor_gain | 0.4400 |
| 12:122730426:CC:C | donor_gain | 0.4400 |
| 12:122729259:G:C | donor_gain | 0.4300 |
| 12:122730430:G:C | donor_gain | 0.4100 |
| 12:122729829:C:CA | donor_gain | 0.4000 |
| 12:122730417:TAGCA:T | donor_loss | 0.3900 |
| 12:122729604:T:TA | donor_gain | 0.3600 |
AlphaMissense
2295 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 12:122729653:G:C | F229L | 0.993 |
| 12:122729653:G:T | F229L | 0.993 |
| 12:122729655:A:G | F229L | 0.993 |
| 12:122729785:G:C | F185L | 0.993 |
| 12:122729785:G:T | F185L | 0.993 |
| 12:122729787:A:G | F185L | 0.993 |
| 12:122730034:G:C | S102R | 0.993 |
| 12:122730034:G:T | S102R | 0.993 |
| 12:122730036:T:G | S102R | 0.993 |
| 12:122729527:G:C | S271R | 0.992 |
| 12:122729527:G:T | S271R | 0.992 |
| 12:122729529:T:G | S271R | 0.992 |
| 12:122729545:G:C | S265R | 0.991 |
| 12:122729545:G:T | S265R | 0.991 |
| 12:122729547:T:G | S265R | 0.991 |
| 12:122729922:A:G | W140R | 0.991 |
| 12:122729922:A:T | W140R | 0.991 |
| 12:122730157:A:C | D61E | 0.990 |
| 12:122730157:A:T | D61E | 0.990 |
| 12:122730172:A:C | N56K | 0.990 |
| 12:122730172:A:T | N56K | 0.990 |
| 12:122729632:G:C | S236R | 0.989 |
| 12:122729632:G:T | S236R | 0.989 |
| 12:122729634:T:G | S236R | 0.989 |
| 12:122729636:G:C | P235R | 0.989 |
| 12:122729636:G:T | P235H | 0.988 |
| 12:122730255:C:G | G29R | 0.986 |
| 12:122729757:A:G | C195R | 0.985 |
| 12:122730000:A:C | Y114D | 0.984 |
| 12:122730159:C:G | D61H | 0.984 |
dbSNP variants (sampled 300 via entrez): RS1000666869 (12:122730925 G>A), RS1000884509 (12:122731204 A>T), RS1001340487 (12:122728228 C>A,T), RS1001520368 (12:122730748 C>A,T), RS1001559176 (12:122728508 C>T), RS1001629583 (12:122732816 CT>C), RS1002212309 (12:122727242 C>T), RS1002451399 (12:122731702 G>A), RS1003561918 (12:122732721 A>C), RS1004500399 (12:122730419 G>A,C), RS1004928477 (12:122727122 T>A), RS1005245133 (12:122731794 A>C,G), RS1005924464 (12:122728368 T>G), RS1007804591 (12:122727521 G>T), RS1008710711 (12:122730555 G>A)
Disease associations
OMIM: gene MIM:606923 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
53 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST005412_5 | Thrombin-activatable fibrinolysis inhibitor levels | 7.000000e-07 |
| GCST010173_78 | Triglyceride levels | 4.000000e-13 |
| GCST010242_447 | HDL cholesterol levels | 4.000000e-11 |
| GCST010242_518 | HDL cholesterol levels | 1.000000e-58 |
| GCST010244_222 | Triglyceride levels | 3.000000e-19 |
| GCST012227_564 | Hip circumference adjusted for BMI | 3.000000e-08 |
| GCST90002391_253 | Mean corpuscular hemoglobin concentration | 2.000000e-10 |
| GCST90002397_222 | Mean spheric corpuscular volume | 2.000000e-12 |
| GCST90002404_147 | Red cell distribution width | 1.000000e-16 |
| GCST90002406_403 | Reticulocyte fraction of red cells | 1.000000e-10 |
| GCST90020024_240 | A body shape index | 4.000000e-09 |
| GCST90020024_246 | A body shape index | 4.000000e-25 |
| GCST90020024_247 | A body shape index | 5.000000e-17 |
| GCST90020024_248 | A body shape index | 5.000000e-14 |
| GCST90020024_250 | A body shape index | 2.000000e-11 |
| GCST90020024_424 | A body shape index | 3.000000e-20 |
| GCST90020024_425 | A body shape index | 5.000000e-11 |
| GCST90020024_426 | A body shape index | 9.000000e-11 |
| GCST90020025_119 | Waist-to-hip ratio adjusted for BMI | 3.000000e-09 |
| GCST90020025_121 | Waist-to-hip ratio adjusted for BMI | 7.000000e-13 |
| GCST90020025_125 | Waist-to-hip ratio adjusted for BMI | 8.000000e-12 |
| GCST90020025_27 | Waist-to-hip ratio adjusted for BMI | 1.000000e-09 |
| GCST90020025_28 | Waist-to-hip ratio adjusted for BMI | 5.000000e-14 |
| GCST90020025_29 | Waist-to-hip ratio adjusted for BMI | 6.000000e-38 |
| GCST90020025_30 | Waist-to-hip ratio adjusted for BMI | 3.000000e-21 |
| GCST90020025_32 | Waist-to-hip ratio adjusted for BMI | 3.000000e-17 |
| GCST90020025_35 | Waist-to-hip ratio adjusted for BMI | 5.000000e-29 |
| GCST90020025_36 | Waist-to-hip ratio adjusted for BMI | 2.000000e-18 |
| GCST90020025_37 | Waist-to-hip ratio adjusted for BMI | 4.000000e-20 |
| GCST90020026_31 | Hip index | 1.000000e-08 |
EFO canonical traits (7, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004530 | triglyceride measurement |
| EFO:0004612 | high density lipoprotein cholesterol measurement |
| EFO:0008039 | BMI-adjusted hip circumference |
| EFO:0004528 | mean corpuscular hemoglobin concentration |
| EFO:0009188 | Red cell distribution width |
| EFO:0007789 | BMI-adjusted waist circumference |
| EFO:0007788 | BMI-adjusted waist-hip ratio |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1075101 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: gpcr — Hydroxycarboxylic acid receptors
Most potent curated ligand interactions (6 total), top 6:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| compound 2 [PMID: 24486398] | Agonist | 7.24 | pEC50 |
| compound 2 [PMID: 31932225] | Agonist | 7.13 | pEC50 |
| 3,5-dihydroxybenzoic acid | Full agonist | 3.72 | pEC50 |
| L-lactic acid | Full agonist | 2.89 | pEC50 |
| D-lactic acid | Partial agonist | 2.52 | pEC50 |
| γ-hydroxybutyrate | Full agonist | 1.82 | pEC50 |
ChEMBL bioactivities
319 potent at pChembl≥5 of 322 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
PubChem BioAssay actives
35 with measured affinity, of 105 total; 35 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 6-(2-chloro-4-ethoxy-5-morpholin-4-ylphenyl)-3-[6-(1-methylpiperidin-4-yl)sulfonyl-1,3-benzothiazol-2-yl]-1H-pyridin-2-one | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.0050 | uM |
| 2-chloro-4-ethoxy-N-[[6-[(4-methylpiperazin-1-yl)methyl]-1,3-benzothiazol-2-yl]carbamoyl]-5-pyrrolidin-1-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.0130 | uM |
| 2-chloro-4-ethoxy-N-[[6-[(4-methylpiperazin-1-yl)methyl]-1,3-benzothiazol-2-yl]carbamoyl]-5-pyrazol-1-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.0190 | uM |
| 3-(1,3-benzothiazol-2-yl)-6-(2-chloro-4-ethoxy-5-morpholin-4-ylphenyl)-1H-pyridin-2-one | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.0210 | uM |
| 6-(2-chloro-4-ethoxy-5-morpholin-4-ylphenyl)-3-[5-(2-hydroxyacetyl)-6,7-dihydro-4H-[1,3]thiazolo[5,4-c]pyridin-2-yl]-1H-pyridin-2-one | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.0220 | uM |
| 2-chloro-4-ethoxy-N-[[6-[(4-methylpiperazin-1-yl)methyl]-1,3-benzothiazol-2-yl]carbamoyl]-5-pyrrol-1-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.0220 | uM |
| 2-chloro-4-ethoxy-N-[[6-(1-methylpiperidin-4-yl)sulfonyl-1,3-benzothiazol-2-yl]carbamoyl]-5-pyrazol-1-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.0230 | uM |
| 2-chloro-4-ethoxy-5-[(2R)-2-methylmorpholin-4-yl]-N-[[6-[(4-methylpiperazin-1-yl)methyl]-1,3-benzothiazol-2-yl]carbamoyl]benzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.0320 | uM |
| 2-chloro-5-[(2R,6S)-2,6-dimethylmorpholin-4-yl]-4-ethoxy-N-[6-[3-(4-methylpiperazin-1-yl)propylsulfonyl]-1,3-benzothiazol-2-yl]benzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.0540 | uM |
| 2-chloro-4-ethoxy-N-[[6-[(4-methylpiperazin-1-yl)methyl]-1,3-benzothiazol-2-yl]carbamoyl]-5-morpholin-4-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.0740 | uM |
| 6-(2-chloro-4-ethoxy-5-morpholin-4-ylphenyl)-3-[5-(2-methoxyacetyl)-6,7-dihydro-4H-[1,3]thiazolo[5,4-c]pyridin-2-yl]-1H-pyridin-2-one | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.0750 | uM |
| 2-chloro-4-ethoxy-5-morpholin-4-yl-N-[(5-phenyl-1,3-thiazol-2-yl)carbamoyl]benzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.1030 | uM |
| 2-chloro-4-ethoxy-N-[6-(1-methylpiperidin-4-yl)oxy-1,3-benzothiazol-2-yl]-5-morpholin-4-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.1100 | uM |
| 2-chloro-4-ethoxy-5-morpholin-4-yl-N-(4,5,6,7-tetrahydro-1,3-benzothiazol-2-ylcarbamoyl)benzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.1200 | uM |
| 2-chloro-4-ethoxy-5-[(2R)-2-methylmorpholin-4-yl]-N-[6-[3-(4-methylpiperazin-1-yl)propylsulfonyl]-1,3-benzothiazol-2-yl]benzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.1600 | uM |
| 2-chloro-4-ethoxy-N-[[6-(1-methylpiperidin-4-yl)sulfonyl-1,3-benzothiazol-2-yl]carbamoyl]-5-morpholin-4-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.1660 | uM |
| 2-(2-chloro-4-ethoxy-5-morpholin-4-ylphenyl)-5-[6-(1-methylpiperidin-4-yl)sulfonyl-1,3-benzothiazol-2-yl]-1H-pyrimidin-6-one | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.2400 | uM |
| N-(1-benzothiophen-2-ylcarbamoyl)-2-chloro-4-ethoxy-5-morpholin-4-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.2600 | uM |
| 2-chloro-5-[(2S,6S)-2,6-dimethylmorpholin-4-yl]-4-ethoxy-N-[6-[3-(4-methylpiperazin-1-yl)propylsulfonyl]-1,3-benzothiazol-2-yl]benzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.2700 | uM |
| N-(1,3-benzothiazol-2-ylcarbamoyl)-2-chloro-4-ethoxy-5-morpholin-4-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.2990 | uM |
| 2-chloro-4-ethoxy-N-[[6-[(4-methylpiperazin-1-yl)methyl]-1,3-benzothiazol-2-yl]carbamoyl]-5-(1H-pyrazol-5-yl)benzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.3600 | uM |
| 2-chloro-4-ethoxy-N-[6-[(4-methylpiperazin-1-yl)methyl]-1,3-benzothiazol-2-yl]-5-morpholin-4-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.4100 | uM |
| 5-(1,3-benzothiazol-2-yl)-2-(2-chloro-4-ethoxy-5-morpholin-4-ylphenyl)-1H-pyrimidin-6-one | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.4900 | uM |
| 2-chloro-4-ethoxy-N-[[6-[(4-methylpiperazin-1-yl)methyl]-1,3-benzothiazol-2-yl]carbamoyl]benzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.5600 | uM |
| 2-chloro-4-ethoxy-N-[6-[3-(4-methylpiperazin-1-yl)propylsulfonyl]-1,3-benzothiazol-2-yl]-5-morpholin-4-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.6000 | uM |
| N-[(5-acetyl-6,7-dihydro-4H-[1,3]thiazolo[5,4-c]pyridin-2-yl)carbamoyl]-2-chloro-4-ethoxy-5-morpholin-4-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.7190 | uM |
| 2-chloro-4-ethoxy-N-[6-(1-methylpiperidin-4-yl)sulfonyl-1,3-benzothiazol-2-yl]-5-morpholin-4-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.7400 | uM |
| 4-ethoxy-N-[[6-[(4-methylpiperazin-1-yl)methyl]-1,3-benzothiazol-2-yl]carbamoyl]-3-morpholin-4-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.7400 | uM |
| 2-chloro-4-ethoxy-N-[(5-methyl-1,3-thiazol-2-yl)carbamoyl]-5-morpholin-4-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.7690 | uM |
| 2-chloro-4-ethoxy-N-[[5-(2-hydroxyacetyl)-6,7-dihydro-4H-[1,3]thiazolo[5,4-c]pyridin-2-yl]carbamoyl]-5-morpholin-4-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 0.8950 | uM |
| 4-ethoxy-N-[[6-[(4-methylpiperazin-1-yl)methyl]-1,3-benzothiazol-2-yl]carbamoyl]-5-morpholin-4-yl-2-(trifluoromethyl)benzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 1.4000 | uM |
| N-(1,3-benzothiazol-2-yl)-2-chloro-4-ethoxy-5-morpholin-4-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 1.9000 | uM |
| 2-chloro-4-fluoro-N-[[6-(1-methylpiperidin-4-yl)sulfonyl-1,3-benzothiazol-2-yl]carbamoyl]-5-pyrazol-1-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 3.6000 | uM |
| 2-chloro-4-methyl-N-[[6-(1-methylpiperidin-4-yl)sulfonyl-1,3-benzothiazol-2-yl]carbamoyl]-5-pyrazol-1-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 6.1000 | uM |
| 2-chloro-N-[[6-(1-methylpiperidin-4-yl)sulfonyl-1,3-benzothiazol-2-yl]carbamoyl]-5-pyrazol-1-ylbenzamide | 1651440: Agonist activity at human GPR81 overexpressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP production | ec50 | 7.0000 | uM |
CTD chemical–gene interactions
17 total (human), top 17 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| aristolochic acid I | increases expression | 1 |
| OTX015 | decreases expression | 1 |
| bisphenol A | affects cotreatment, increases methylation | 1 |
| tris(2-butoxyethyl) phosphate | affects expression | 1 |
| mono-(2-ethylhexyl)phthalate | increases expression | 1 |
| S-(1,2-dichlorovinyl)cysteine | affects cotreatment, decreases expression | 1 |
| 2-palmitoylglycerol | increases expression | 1 |
| bisphenol S | increases expression | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
| Fulvestrant | affects cotreatment, increases methylation | 1 |
| Dimethyl Sulfoxide | affects expression | 1 |
| Estradiol | decreases expression | 1 |
| Lipopolysaccharides | affects cotreatment, decreases expression | 1 |
| Tobacco Smoke Pollution | affects expression | 1 |
| Aflatoxin B1 | decreases expression | 1 |
| Copper Sulfate | increases expression | 1 |
| Vitamin K 3 | affects expression | 1 |
ChEMBL screening assays
28 unique, capped per target: 16 binding, 12 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1105990 | Binding | Binding affinity to GPR81 | Discovery of a biaryl cyclohexene carboxylic acid (MK-6892): a potent and selective high affinity niacin receptor full agonist with reduced flushing profiles in animals as a preclinical candidate. — J Med Chem |
| CHEMBL2150703 | Functional | Agonist activity at human recombinant GPR81 transfected in african green monkey COS-7 cells after 20 mins by [35S]GTPgammaS binding assay | Identification of Hydroxybenzoic Acids as Selective Lactate Receptor (GPR81) Agonists with Antilipolytic Effects. — ACS Med Chem Lett |
Cellosaurus cell lines
2 cell lines: 2 spontaneously immortalized cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_C3MM | CHO-GPR81 | Spontaneously immortalized cell line | Female |
| CVCL_KV30 | cAMP Hunter CHO-K1 GPR81 Gi | Spontaneously immortalized cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Targeted by drugs: D-Lactic Acid, Niacin, Oxybate