HCP5B

Summary

HCP5B (HLA complex P5B, HGNC:30984) is a long non-coding RNA gene on chromosome 6p21.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:30984
Approved symbol	HCP5B
Name	HLA complex P5B
Location	6p21.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	P5-10, P5.9
Ensembl gene	ENSG00000281831
Ensembl biotype	lncRNA
Entrez	352990
RNAcentral	URS00008118C4 — lncRNA, 1889 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000630472

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000630472 — 1 exons

Exon	Start	End
ENSE00003761283	29871895	29873783

Expression profiles

Bgee: expression breadth ubiquitous, 130 present calls, max score 57.45.

Top tissues by expression

224 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ventricular zone	UBERON:0003053	57.45	silver quality
pituitary gland	UBERON:0000007	57.29	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	56.49	gold quality
adenohypophysis	UBERON:0002196	56.31	gold quality
mucosa of stomach	UBERON:0001199	56.16	gold quality
endothelial cell	CL:0000115	56.03	gold quality
left adrenal gland cortex	UBERON:0035825	55.00	gold quality
right adrenal gland cortex	UBERON:0035827	54.99	gold quality
tendon of biceps brachii	UBERON:0008188	54.58	gold quality
right lobe of liver	UBERON:0001114	53.85	gold quality
small intestine Peyer’s patch	UBERON:0003454	53.85	gold quality
left adrenal gland	UBERON:0001234	53.78	gold quality
adrenal cortex	UBERON:0001235	53.77	gold quality
hindlimb stylopod muscle	UBERON:0004252	53.70	silver quality
small intestine	UBERON:0002108	52.79	gold quality
right lobe of thyroid gland	UBERON:0001119	52.65	gold quality
adrenal gland	UBERON:0002369	52.51	gold quality
monocyte	CL:0000576	52.03	silver quality
islet of Langerhans	UBERON:0000006	51.78	gold quality
cerebellar cortex	UBERON:0002129	51.73	gold quality
cerebellar hemisphere	UBERON:0002245	51.67	gold quality
stromal cell of endometrium	CL:0002255	51.53	silver quality
left lobe of thyroid gland	UBERON:0001120	51.44	gold quality
thyroid gland	UBERON:0002046	51.22	gold quality
right adrenal gland	UBERON:0001233	51.13	gold quality
right hemisphere of cerebellum	UBERON:0014890	50.80	gold quality
right ovary	UBERON:0002118	50.72	gold quality
right lung	UBERON:0002167	50.61	gold quality
cerebellum	UBERON:0002037	50.58	gold quality
descending thoracic aorta	UBERON:0002345	50.41	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.15

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.