HERPUD2-AS1

Summary

HERPUD2-AS1 (HERPUD2 antisense RNA 1, HGNC:55258) is a long non-coding RNA gene on chromosome 7p14.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55258
Approved symbol	HERPUD2-AS1
Name	HERPUD2 antisense RNA 1
Location	7p14.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000271122
Ensembl biotype	lncRNA
Entrez	101930085
RNAcentral	URS0000A76862 — lncRNA, 4208 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000605778

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000605778 — 1 exons

Exon	Start	End
ENSE00004070660	35695204	35699413

Expression profiles

Bgee: expression breadth ubiquitous, 223 present calls, max score 77.56.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 7.3792 / max 54.2742, expressed in 1765 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
78098	7.3792	1765

Top tissues by expression

248 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
islet of Langerhans	UBERON:0000006	77.56	gold quality
endothelial cell	CL:0000115	75.99	silver quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	75.41	gold quality
cortical plate	UBERON:0005343	75.14	gold quality
smooth muscle tissue	UBERON:0001135	75.01	gold quality
ventricular zone	UBERON:0003053	74.85	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	74.84	gold quality
stromal cell of endometrium	CL:0002255	74.51	gold quality
gastrocnemius	UBERON:0001388	74.27	gold quality
muscle of leg	UBERON:0001383	74.25	gold quality
epithelial cell of pancreas	CL:0000083	73.94	gold quality
prefrontal cortex	UBERON:0000451	73.70	gold quality
hindlimb stylopod muscle	UBERON:0004252	73.35	gold quality
spinal cord	UBERON:0002240	73.32	gold quality
pancreas	UBERON:0001264	73.01	gold quality
ganglionic eminence	UBERON:0004023	72.96	gold quality
rectum	UBERON:0001052	72.87	gold quality
kidney epithelium	UBERON:0004819	72.81	gold quality
leukocyte	CL:0000738	72.56	gold quality
monocyte	CL:0000576	72.52	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	72.43	gold quality
right coronary artery	UBERON:0001625	72.03	gold quality
heart left ventricle	UBERON:0002084	71.96	gold quality
right lobe of liver	UBERON:0001114	71.70	gold quality
cardiac ventricle	UBERON:0002082	71.53	gold quality
popliteal artery	UBERON:0002250	71.27	gold quality
tibial artery	UBERON:0007610	71.26	gold quality
left coronary artery	UBERON:0001626	70.79	gold quality
body of pancreas	UBERON:0001150	70.76	gold quality
lower esophagus	UBERON:0013473	70.69	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.67

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.