HHATL-AS1

Summary

HHATL-AS1 (HHATL antisense RNA 1, HGNC:42439) is a long non-coding RNA gene on chromosome 3p22.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:42439
Approved symbol	HHATL-AS1
Name	HHATL antisense RNA 1
Location	3p22.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000230970
Ensembl biotype	lncRNA
Entrez	100874044
RNAcentral	URS0000BC45C0 — lncRNA, 992 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000423165, ENST00000600839, ENST00000625517

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000423165 — 2 exons

Exon	Start	End
ENSE00001643387	42702653	42702729
ENSE00001772466	42704149	42704628

Expression profiles

Bgee: expression breadth ubiquitous, 117 present calls, max score 96.54.

Top tissues by expression

117 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right uterine tube	UBERON:0001302	96.54	gold quality
gastrocnemius	UBERON:0001388	85.63	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	85.15	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	84.46	gold quality
muscle of leg	UBERON:0001383	84.15	gold quality
skeletal muscle tissue	UBERON:0001134	79.47	gold quality
hindlimb stylopod muscle	UBERON:0004252	77.92	gold quality
substantia nigra	UBERON:0002038	76.18	gold quality
fallopian tube	UBERON:0003889	76.06	gold quality
Ammon’s horn	UBERON:0001954	75.00	gold quality
caudate nucleus	UBERON:0001873	74.49	gold quality
adrenal tissue	UBERON:0018303	74.42	gold quality
putamen	UBERON:0001874	73.35	gold quality
right lung	UBERON:0002167	72.74	gold quality
nucleus accumbens	UBERON:0001882	72.70	gold quality
amygdala	UBERON:0001876	72.03	gold quality
temporal lobe	UBERON:0001871	71.90	gold quality
mucosa of stomach	UBERON:0001199	71.56	gold quality
Brodmann (1909) area 9	UBERON:0013540	71.45	gold quality
right atrium auricular region	UBERON:0006631	71.38	gold quality
hypothalamus	UBERON:0001898	71.18	gold quality
right coronary artery	UBERON:0001625	71.00	gold quality
bone marrow	UBERON:0002371	70.68	gold quality
endometrium	UBERON:0001295	70.39	gold quality
apex of heart	UBERON:0002098	70.26	gold quality
left testis	UBERON:0004533	69.91	gold quality
corpus callosum	UBERON:0002336	69.44	gold quality
right testis	UBERON:0004534	69.26	gold quality
testis	UBERON:0000473	68.89	gold quality
left uterine tube	UBERON:0001303	68.16	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.69

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.