HNRNPD-DT

Summary

HNRNPD-DT (HNRNPD divergent transcript, HGNC:55205) is a long non-coding RNA gene on chromosome 4q21.22.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55205
Approved symbol	HNRNPD-DT
Name	HNRNPD divergent transcript
Location	4q21.22
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000272677
Ensembl biotype	lncRNA
Entrez	101928963
RNAcentral	URS00026A2749 — lncRNA, 451 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000609552, ENST00000609575, ENST00000688760, ENST00000843906, ENST00000843907

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000609552 — 1 exons

Exon	Start	End
ENSE00004270230	82374080	82375544

Expression profiles

Bgee: expression breadth ubiquitous, 175 present calls, max score 88.43.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 2.9617 / max 51.3915, expressed in 1265 samples.

FANTOM5 promoters (4 alternative TSS)

Promoter ID	TPM avg	Samples expressed
48579	1.7578	991
48578	0.7406	226
48580	0.2366	94
203269	0.2267	96

Top tissues by expression

230 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.43	gold quality
oviduct epithelium	UBERON:0004804	81.21	silver quality
colonic epithelium	UBERON:0000397	78.22	gold quality
cerebellar hemisphere	UBERON:0002245	77.79	gold quality
right hemisphere of cerebellum	UBERON:0014890	77.71	gold quality
cerebellar cortex	UBERON:0002129	77.60	gold quality
thymus	UBERON:0002370	77.25	silver quality
granulocyte	CL:0000094	76.30	gold quality
cerebellum	UBERON:0002037	76.28	gold quality
ganglionic eminence	UBERON:0004023	75.53	gold quality
gastrocnemius	UBERON:0001388	75.42	gold quality
left ovary	UBERON:0002119	75.12	gold quality
right ovary	UBERON:0002118	74.87	gold quality
hindlimb stylopod muscle	UBERON:0004252	74.82	gold quality
apex of heart	UBERON:0002098	74.60	gold quality
muscle of leg	UBERON:0001383	74.32	gold quality
ventricular zone	UBERON:0003053	74.18	gold quality
body of uterus	UBERON:0009853	73.96	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	73.92	gold quality
cortical plate	UBERON:0005343	73.59	gold quality
spleen	UBERON:0002106	73.42	gold quality
metanephros cortex	UBERON:0010533	72.80	gold quality
ovary	UBERON:0000992	72.29	gold quality
tibial nerve	UBERON:0001323	72.25	gold quality
lower esophagus muscularis layer	UBERON:0035833	72.03	gold quality
lower esophagus	UBERON:0013473	72.00	gold quality
muscle layer of sigmoid colon	UBERON:0035805	71.76	gold quality
right atrium auricular region	UBERON:0006631	71.69	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	71.67	gold quality
Brodmann (1909) area 9	UBERON:0013540	71.51	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.84

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.