HSDL2-AS1

Summary

HSDL2-AS1 (HSDL2 antisense RNA 1, HGNC:31438) is a long non-coding RNA gene on chromosome 9q32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:31438
Approved symbol	HSDL2-AS1
Name	HSDL2 antisense RNA 1
Location	9q32
Locus type	RNA, long non-coding
Status	Approved
Aliases	bA32M23.3
Ensembl gene	ENSG00000230185
Ensembl biotype	lncRNA
Entrez	100133204
RNAcentral	URS00021ED9D3 — lncRNA, 2746 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 41 — 41 lncRNA

ENST00000412934, ENST00000457681, ENST00000460965, ENST00000463223, ENST00000656504, ENST00000687181, ENST00000691181, ENST00000803330, ENST00000803331, ENST00000803332, ENST00000803333, ENST00000803334, ENST00000803335, ENST00000803336, ENST00000803337, ENST00000803338, ENST00000803339, ENST00000803340, ENST00000803341, ENST00000803342, ENST00000803343, ENST00000803344, ENST00000803345, ENST00000803346, ENST00000803347, ENST00000803348, ENST00000803349, ENST00000803350, ENST00000803351, ENST00000803352, ENST00000803353, ENST00000803354, ENST00000803355, ENST00000803356, ENST00000803357, ENST00000803358, ENST00000803359, ENST00000803360, ENST00000803361, ENST00000803362, ENST00000803363

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000412934 — 3 exons

Exon	Start	End
ENSE00001605912	112484456	112484626
ENSE00002033842	112469723	112469837
ENSE00002087413	112433816	112434113

Expression profiles

Bgee: expression breadth ubiquitous, 134 present calls, max score 86.03.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 3.0619 / max 56.4595, expressed in 1102 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
102069	2.2635	1000
102070	0.7984	359

Top tissues by expression

134 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.03	gold quality
body of stomach	UBERON:0001161	84.28	gold quality
fundus of stomach	UBERON:0001160	84.22	gold quality
stomach	UBERON:0000945	82.89	gold quality
right adrenal gland	UBERON:0001233	82.59	gold quality
left adrenal gland cortex	UBERON:0035825	82.43	gold quality
right adrenal gland cortex	UBERON:0035827	82.21	gold quality
left adrenal gland	UBERON:0001234	81.39	gold quality
left ovary	UBERON:0002119	80.47	gold quality
adrenal gland	UBERON:0002369	80.30	gold quality
ovary	UBERON:0000992	79.97	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	78.23	gold quality
right ovary	UBERON:0002118	77.81	gold quality
right lobe of liver	UBERON:0001114	75.23	gold quality
right testis	UBERON:0004534	75.13	gold quality
testis	UBERON:0000473	74.96	gold quality
left testis	UBERON:0004533	73.98	gold quality
adrenal tissue	UBERON:0018303	73.85	gold quality
endocervix	UBERON:0000458	73.72	gold quality
liver	UBERON:0002107	73.23	gold quality
uterine cervix	UBERON:0000002	72.12	gold quality
ectocervix	UBERON:0012249	71.67	gold quality
mucosa of stomach	UBERON:0001199	70.84	gold quality
colonic epithelium	UBERON:0000397	70.61	gold quality
cortical plate	UBERON:0005343	70.26	gold quality
right uterine tube	UBERON:0001302	69.78	gold quality
cortex of kidney	UBERON:0001225	69.49	gold quality
hindlimb stylopod muscle	UBERON:0004252	69.44	gold quality
bone marrow cell	CL:0002092	69.20	silver quality
descending thoracic aorta	UBERON:0002345	69.16	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.01

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.