HSH2D-AS1

Summary

HSH2D-AS1 (HSH2D and RAB8A antisense RNA 1, HGNC:58332) is a long non-coding RNA gene on chromosome 19p13.11.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58332
Approved symbol	HSH2D-AS1
Name	HSH2D and RAB8A antisense RNA 1
Location	19p13.11
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000269243
Ensembl biotype	lncRNA
Entrez	139637964

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000597983, ENST00000599676

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000597983 — 2 exons

Exon	Start	End
ENSE00003027660	16139735	16139892
ENSE00003149903	16123661	16126489

Expression profiles

Bgee: expression breadth ubiquitous, 133 present calls, max score 94.32.

Top tissues by expression

133 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
mucosa of transverse colon	UBERON:0004991	94.32	gold quality
granulocyte	CL:0000094	93.56	gold quality
bone marrow cell	CL:0002092	91.27	gold quality
right lobe of liver	UBERON:0001114	91.21	gold quality
duodenum	UBERON:0002114	91.07	gold quality
blood	UBERON:0000178	90.64	gold quality
liver	UBERON:0002107	90.62	gold quality
lymph node	UBERON:0000029	90.16	gold quality
lower esophagus mucosa	UBERON:0035834	89.56	gold quality
spleen	UBERON:0002106	89.32	gold quality
stromal cell of endometrium	CL:0002255	89.20	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	88.23	gold quality
small intestine	UBERON:0002108	88.00	gold quality
placenta	UBERON:0001987	87.83	gold quality
small intestine Peyer’s patch	UBERON:0003454	87.64	gold quality
right adrenal gland	UBERON:0001233	87.44	gold quality
vermiform appendix	UBERON:0001154	87.30	gold quality
tonsil	UBERON:0002372	87.19	gold quality
right adrenal gland cortex	UBERON:0035827	87.19	gold quality
transverse colon	UBERON:0001157	87.10	gold quality
colonic epithelium	UBERON:0000397	86.90	gold quality
bone marrow	UBERON:0002371	86.63	gold quality
ventricular zone	UBERON:0003053	86.62	gold quality
gall bladder	UBERON:0002110	86.43	gold quality
left adrenal gland	UBERON:0001234	86.33	gold quality
right coronary artery	UBERON:0001625	86.29	gold quality
intestine	UBERON:0000160	86.26	gold quality
left adrenal gland cortex	UBERON:0035825	86.20	gold quality
esophagus mucosa	UBERON:0002469	86.13	gold quality
rectum	UBERON:0001052	86.10	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.11

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.