HSPA1B
gene geneOn this page
Also known as HSP70-2
Summary
HSPA1B (heat shock protein family A (Hsp70) member 1B, HGNC:5233) is a protein-coding gene on chromosome 6p21.33, encoding Heat shock 70 kDa protein 1B (P0DMV9). Molecular chaperone implicated in a wide variety of cellular processes, including protection of the proteome from stress, folding and transport of newly synthesized polypeptides, activation of proteolysis of misfolded proteins and the formation and dissociation of protein comple….
This intronless gene encodes a 70kDa heat shock protein which is a member of the heat shock protein 70 family. In conjuction with other heat shock proteins, this protein stabilizes existing proteins against aggregation and mediates the folding of newly translated proteins in the cytosol and in organelles. It is also involved in the ubiquitin-proteasome pathway through interaction with the AU-rich element RNA-binding protein 1. The gene is located in the major histocompatibility complex class III region, in a cluster with two closely related genes which encode similar proteins.
Source: NCBI Gene 3304 — RefSeq curated summary.
At a glance
- GWAS associations: 25
- Clinical variants (ClinVar): 28 total
- Druggable target: yes
- MANE Select transcript:
NM_005346
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:5233 |
| Approved symbol | HSPA1B |
| Name | heat shock protein family A (Hsp70) member 1B |
| Location | 6p21.33 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | HSP70-2 |
| Ensembl gene | ENSG00000204388 |
| Ensembl biotype | protein_coding |
| OMIM | 603012 |
| Entrez | 3304 |
Gene structure
Transcript identifiers
Ensembl transcripts: 1 — 1 protein_coding
ENST00000375650
RefSeq mRNA: 1 — MANE Select: NM_005346
NM_005346
CCDS: CCDS34415
Canonical transcript exons
ENST00000375650 — 1 exons
| Exon | Start | End |
|---|---|---|
| ENSE00002287005 | 31827738 | 31830254 |
Expression profiles
Bgee: expression breadth ubiquitous, 134 present calls, max score 99.72.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 197.9684 / max 19443.1198, expressed in 1816 samples.
FANTOM5 promoters (9 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 67059 | 191.2891 | 1816 |
| 67063 | 2.1641 | 667 |
| 67061 | 1.7276 | 712 |
| 67064 | 1.0237 | 351 |
| 67060 | 0.5454 | 278 |
| 67066 | 0.4611 | 149 |
| 67062 | 0.3371 | 137 |
| 67065 | 0.3369 | 132 |
| 67058 | 0.0834 | 29 |
Top tissues by expression
134 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| lower esophagus mucosa | UBERON:0035834 | 99.72 | gold quality |
| ventricular zone | UBERON:0003053 | 99.68 | gold quality |
| gall bladder | UBERON:0002110 | 99.33 | gold quality |
| ganglionic eminence | UBERON:0004023 | 99.12 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 98.92 | gold quality |
| mucosa of stomach | UBERON:0001199 | 98.80 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 98.65 | gold quality |
| hypothalamus | UBERON:0001898 | 98.45 | gold quality |
| right uterine tube | UBERON:0001302 | 98.29 | gold quality |
| pituitary gland | UBERON:0000007 | 98.25 | gold quality |
| substantia nigra | UBERON:0002038 | 98.15 | gold quality |
| omental fat pad | UBERON:0010414 | 98.11 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 97.95 | gold quality |
| Ammon’s horn | UBERON:0001954 | 97.95 | gold quality |
| caudate nucleus | UBERON:0001873 | 97.92 | gold quality |
| nucleus accumbens | UBERON:0001882 | 97.89 | gold quality |
| esophagus mucosa | UBERON:0002469 | 97.88 | gold quality |
| right atrium auricular region | UBERON:0006631 | 97.85 | gold quality |
| right lobe of liver | UBERON:0001114 | 97.70 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 97.66 | gold quality |
| fallopian tube | UBERON:0003889 | 97.64 | gold quality |
| skin of abdomen | UBERON:0001416 | 97.61 | gold quality |
| temporal lobe | UBERON:0001871 | 97.58 | gold quality |
| adenohypophysis | UBERON:0002196 | 97.58 | gold quality |
| amygdala | UBERON:0001876 | 97.56 | gold quality |
| putamen | UBERON:0001874 | 97.50 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 97.50 | gold quality |
| esophagus | UBERON:0001043 | 97.42 | gold quality |
| heart left ventricle | UBERON:0002084 | 97.33 | gold quality |
| vagina | UBERON:0000996 | 97.32 | gold quality |
Single-cell (SCXA)
Detected in 17 experiment(s), a significant marker in 14.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-10137 | yes | 1933.73 |
| E-CURD-46 | yes | 354.87 |
| E-GEOD-81547 | yes | 353.87 |
| E-HCAD-29 | yes | 340.47 |
| E-CURD-95 | yes | 321.44 |
| E-HCAD-4 | yes | 226.97 |
| E-GEOD-149689 | yes | 158.19 |
| E-MTAB-8207 | yes | 124.66 |
| E-MTAB-10290 | yes | 104.71 |
| E-HCAD-8 | yes | 66.30 |
| E-HCAD-1 | yes | 56.31 |
| E-CURD-120 | yes | 48.04 |
| E-MTAB-10287 | yes | 47.64 |
| E-GEOD-135922 | yes | 22.80 |
| E-MTAB-9543 | no | 7125.64 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
1 targets.
| Target | Regulation |
|---|---|
| KCNH2 | Activation |
Upstream regulators (CollecTRI, top): AR, CREB1, FOXA1, HIF1A, HSF1, HSF2, HSPH1, NFAT5, NFKB1, NFYA, NFYB, NFYC, PARP1, RELA, SP1, SP3, STAT3, TCF3
miRNA regulators (miRDB)
40 targeting HSPA1B, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-34A-5P | 99.99 | 71.21 | 1784 |
| HSA-MIR-449A | 99.99 | 71.05 | 1776 |
| HSA-MIR-548P | 99.98 | 72.25 | 3784 |
| HSA-MIR-520D-5P | 99.98 | 73.34 | 4883 |
| HSA-MIR-524-5P | 99.98 | 73.43 | 4882 |
| HSA-MIR-5696 | 99.98 | 72.36 | 4487 |
| HSA-MIR-34C-5P | 99.97 | 70.45 | 1577 |
| HSA-MIR-449B-5P | 99.97 | 70.26 | 1580 |
| HSA-MIR-302C-5P | 99.97 | 72.56 | 3642 |
| HSA-MIR-495-3P | 99.96 | 72.81 | 4197 |
| HSA-MIR-5688 | 99.96 | 73.23 | 4504 |
| HSA-MIR-545-3P | 99.95 | 70.74 | 2783 |
| HSA-MIR-144-3P | 99.94 | 73.98 | 2698 |
| HSA-MIR-335-3P | 99.93 | 73.36 | 4958 |
| HSA-MIR-3143 | 99.93 | 71.96 | 3104 |
| HSA-MIR-497-5P | 99.92 | 71.83 | 2674 |
| HSA-MIR-10527-5P | 99.91 | 72.28 | 3754 |
| HSA-MIR-7-1-3P | 99.91 | 71.53 | 4384 |
| HSA-MIR-7-2-3P | 99.91 | 71.40 | 4394 |
| HSA-MIR-6499-3P | 99.90 | 66.38 | 1212 |
| HSA-MIR-15A-5P | 99.90 | 72.80 | 2787 |
| HSA-MIR-15B-5P | 99.90 | 72.78 | 2798 |
| HSA-MIR-16-5P | 99.90 | 72.80 | 2780 |
| HSA-MIR-195-5P | 99.90 | 72.81 | 2805 |
| HSA-MIR-6838-5P | 99.89 | 71.94 | 2690 |
| HSA-MIR-424-5P | 99.89 | 71.90 | 2641 |
| HSA-MIR-576-5P | 99.84 | 70.46 | 2582 |
| HSA-MIR-548AU-3P | 99.70 | 68.22 | 1373 |
Literature-anchored findings (GeneRIF, showing 40)
- Effect of hyaluronan oligosaccharides on the expression of heat shock protein 72. (PMID:11864979)
- These data strongly suggest that in TNF-induced apoptosis, Hsp72 specifically interferes with Bid-dependent apoptotic pathway via inhibition of JNK. (PMID:11971973)
- IL-6 activates HSP72 gene expression in human skeletal muscle. (PMID:12207910)
- These observations suggest that heat shock protein 72 functions as an endogenous inhibitor of ASK1. (PMID:12391142)
- Increase in arterial HSP72 was accounted for, at least in part, by release from the hepatosplanchnic viscera with values increasing (P < 0.05) from undetectable levels at rest to 5.2 +/- 0.2 pg min(-1) after 120 min. (PMID:12411538)
- HSP72 may protect intestinal epithelial cells from Clostridium difficile toxin A-mediated damage through actin stabilization, mitochondrial protection, and inhibition of apoptosis activation, but not by prevention of RhoA glucosylation. (PMID:12490434)
- Heat shock protein 70 genotypes HSPA1B and HSPA1L influence cytokine concentrations, clinical outcome after severe injury (PMID:12544996)
- HSP70-2 gene may have a role in susceptibility to nasopharyngeal carcinoma (PMID:12691826)
- Caucasian patients carrying the HSP70-2 PstI-polymorphism seem to have a more severe form of Crohn’s disease (perforations, abscesses, fistulas, conglomerate tumors). (PMID:12730033)
- HSP70-2 polymorphism has susceptibility implications in both obesity and diabetes. (PMID:15223990)
- High frequencies of the HSP70-2 G and the TNF-alpha -308 A alleles were associated with risk of severe acute pancreatitis. (PMID:15714129)
- There is a significantly increased association of HSP70-2 B/B genotype with the risk of acute mountain sickness. (PMID:15748471)
- HSP70-2 polymorphism may have a role in development of carotid plaque rupture and cerebral ischaemia in NIDDM patients (PMID:15992611)
- The genetic determination of the defense mechanisms in Crohn’s disease appears to be associated with the polymorphism of the Hsp70-2 gene. (PMID:16165702)
- HSP70-2 genetic polymorphisms and zinc deficiency are independently associated with susceptibility to coronary artery disease. (PMID:16953332)
- Upon heat shock, the Hsp70.1 promoter-bound PARP-1 is released to activate transcription through ADP-ribosylation of other Hsp70.1 promoter-bound proteins. (PMID:17158748)
- the absence of association between Crohn’s disease and HSP70-2 gene in the Tunisian population (PMID:17301649)
- A change in the pattern of GC-box-interacting factors corresponds to activation of the Hsp70.2/Hst70 gene, confirming the importance of this regulatory element. (PMID:17311111)
- relationship between the carrier status of HSPA1B (1267)G and TLR4 (896)G alleles and the development of recurrent UTI in childhood independently of other renal abnormalities (PMID:17314700)
- identification of the most common polymorphisms in HSPA1A & HSPA1B in asthmatics & controls from 3 ethnic groups; study indicates most of the HSPA1A and HSPA1B polymorphisms identified in dbSNP are rare or were derived during post transcriptional events (PMID:17364813)
- Crohn’s disease patients with BB genotype of HSP70-2 polymorphism tend to experience a more severe clinical course; allele A is associated with more severe ulcerative colitis (PMID:17532782)
- Data presented in this report provide further insight and direct evidence of the functions of hELP3 in HSP70-2 gene transcriptional elongation in human cells. (PMID:17558451)
- HSP70-2 polymorphism does not play a major role in the development of alcoholic chronic pancreatits in Koreans. (PMID:17940904)
- An association of inflammatory fDCM with the HSPA1B 1267 A–>G polymorphism was identified. The HSPA1B 1267 A–>G polymorphism has been associated with autoimmune disorders, this may point to a pathogenetic role of autoimmune phenomena in familial DCM. (PMID:18191480)
- The frequencies of the HSPA1B P2/P2 genotype and the HSPA1B P2 allele in HCC patients were higher than in unrelated controls (each p = 0.0001). (PMID:18344806)
- P2/P2 polymorphism of HSP70-2 at position 1267 was associated with a lower risk of gastric cancer in females. (PMID:18478330)
- clathrin-FKBP36-Hsp72 complexes resulting from both identified interactions are bound to the matrices of clathrin-coated vesicles in spermatocytes, which indicates a possible role of FKBP36 and Hsp72 in the disassembly of clathrin coats (PMID:18529014)
- HSPA1B polymorphisms studied seem not to play a role in determining the severity of alcoholic pancreatitis or the risk of developing alcoholic pancreatitis. (PMID:18580445)
- An association of HspA1B (also known as Hsp70-2) +1267 alleles with serum Hsp70 levels was found in congestive heart failure. (PMID:18759004)
- polymorphisms in HSP70-2 genes associated with noise-induced hearing loss (PMID:18813331)
- HSP70-2 down-regulation induces apoptosis of HCC cells through the mitochondrial apoptotic pathway. (PMID:18822209)
- HSP70-2 is transcriptionally upregulated by HIF-1 in cancer cells in response to hypoxia (PMID:18844219)
- These results suggest that the HSPA1B-179C>T:1267A>G haplotype is functional and may explain the association of the HSP70 gene with development of septic shock. (PMID:19046306)
- significant individual and interactive influences of five polymorphisms in three genes of Hsp70 family on essential hypertension. (PMID:19085089)
- HSP70-2 expression is up-regulated in response to hypoxia. (PMID:19335985)
- The aim of this paper is to investigate a set of mutations in three genes, HSPA1A, HSPA1B and HSPA1L, in schizophrenia; findings further support a role of heat shock proteins in the pathophysiology of schizophrenia (PMID:19439993)
- we did not find an association of HSP70-2 SNP at position +1267 with gastric cancer (PMID:19626584)
- The BB genotype of heat-shock protein 70-2 gene is associated with gastric pre-malignant condition in H. pylori-infected older patients. (PMID:19661373)
- HSPA1B genotyping showed that AG genotype was significantly associated with the severity of foot ulceration, need for amputation and median length of hospital stay but HSPA1L genotypes did not show any significant association with these parameters. (PMID:19731315)
- The data indicate that the minor allele at rs9281590 reduces HSPA1B mRNA stability and expression and that the same allele is associated with lower fasting glucose and triglyceride levels. (PMID:19754858)
Cross-species orthologs
8 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Hspa1b | ENSMUSG00000090877 |
| mus_musculus | Hspa1a | ENSMUSG00000091971 |
| rattus_norvegicus | Hspa1b | ENSRNOG00000045654 |
| drosophila_melanogaster | Hsp110 | FBGN0026418 |
| caenorhabditis_elegans | hsp-70 | WBGENE00002026 |
| caenorhabditis_elegans | WBGENE00009691 | |
| caenorhabditis_elegans | WBGENE00009692 | |
| caenorhabditis_elegans | WBGENE00016250 |
Paralogs (13): HSPA5 (ENSG00000044574), HSPA8 (ENSG00000109971), HSPA9 (ENSG00000113013), HSPH1 (ENSG00000120694), HSPA2 (ENSG00000126803), HYOU1 (ENSG00000149428), HSPA13 (ENSG00000155304), HSPA4L (ENSG00000164070), HSPA4 (ENSG00000170606), HSPA6 (ENSG00000173110), HSPA14 (ENSG00000187522), HSPA1A (ENSG00000204389), HSPA1L (ENSG00000204390)
Protein
Protein identifiers
Heat shock 70 kDa protein 1B — P0DMV9 (reviewed: P0DMV9)
Alternative names: Heat shock 70 kDa protein 2, Heat shock protein family A member 1B
All UniProt accessions (2): P0DMV9, A8K5I0
UniProt curated annotations — full annotation on UniProt →
Function. Molecular chaperone implicated in a wide variety of cellular processes, including protection of the proteome from stress, folding and transport of newly synthesized polypeptides, activation of proteolysis of misfolded proteins and the formation and dissociation of protein complexes. Plays a pivotal role in the protein quality control system, ensuring the correct folding of proteins, the re-folding of misfolded proteins and controlling the targeting of proteins for subsequent degradation. This is achieved through cycles of ATP binding, ATP hydrolysis and ADP release, mediated by co-chaperones. The co-chaperones have been shown to not only regulate different steps of the ATPase cycle, but they also have an individual specificity such that one co-chaperone may promote folding of a substrate while another may promote degradation. The affinity for polypeptides is regulated by its nucleotide bound state. In the ATP-bound form, it has a low affinity for substrate proteins. However, upon hydrolysis of the ATP to ADP, it undergoes a conformational change that increases its affinity for substrate proteins. It goes through repeated cycles of ATP hydrolysis and nucleotide exchange, which permits cycles of substrate binding and release. The co-chaperones are of three types: J-domain co-chaperones such as HSP40s (stimulate ATPase hydrolysis by HSP70), the nucleotide exchange factors (NEF) such as BAG1/2/3 (facilitate conversion of HSP70 from the ADP-bound to the ATP-bound state thereby promoting substrate release), and the TPR domain chaperones such as HOPX and STUB1. Maintains protein homeostasis during cellular stress through two opposing mechanisms: protein refolding and degradation. Its acetylation/deacetylation state determines whether it functions in protein refolding or protein degradation by controlling the competitive binding of co-chaperones HOPX and STUB1. During the early stress response, the acetylated form binds to HOPX which assists in chaperone-mediated protein refolding, thereafter, it is deacetylated and binds to ubiquitin ligase STUB1 that promotes ubiquitin-mediated protein degradation. Regulates centrosome integrity during mitosis, and is required for the maintenance of a functional mitotic centrosome that supports the assembly of a bipolar mitotic spindle. Enhances STUB1-mediated SMAD3 ubiquitination and degradation and facilitates STUB1-mediated inhibition of TGF-beta signaling. Essential for STUB1-mediated ubiquitination and degradation of FOXP3 in regulatory T-cells (Treg) during inflammation. (Microbial infection) In case of rotavirus A infection, serves as a post-attachment receptor for the virus to facilitate entry into the cell.
Subunit / interactions. May be an auxiliary component of the CatSper complex. Identified in a IGF2BP1-dependent mRNP granule complex containing untranslated mRNAs. Interacts with CHCHD3, DNAJC7, IRAK1BP1, PPP5C and TSC2. Interacts with TERT; the interaction occurs in the absence of the RNA component, TERC, and dissociates once the TERT complex has formed. Interacts with TRIM5 (via B30.2/SPRY domain). Interacts with METTL21A. Interacts with PRKN. Interacts with FOXP3. Interacts with NOD2; the interaction enhances NOD2 stability. Interacts with DNAJC9 (via J domain). Interacts with ATF5; the interaction protects ATF5 from degradation via proteasome-dependent and caspase-dependent processes. Interacts with NAA10, HSP40, HSP90 and HDAC4. The acetylated form and the non-acetylated form interact with HOPX and STUB1 respectively. Interacts with NEDD1. Interacts (via NBD) with BAG1, BAG2, BAG3 and HSPH1/HSP105. Interacts with SMAD3. Interacts with DNAJC8.
Subcellular location. Cytoplasm. Cytoskeleton. Microtubule organizing center. Centrosome.
Tissue specificity. HSPA1B is testis-specific.
Post-translational modifications. In response to cellular stress, acetylated at Lys-77 by NA110 and then gradually deacetylated by HDAC4 at later stages. Acetylation enhances its chaperone activity and also determines whether it will function as a chaperone for protein refolding or degradation by controlling its binding to co-chaperones HOPX and STUB1. The acetylated form and the non-acetylated form bind to HOPX and STUB1 respectively. Acetylation also protects cells against various types of cellular stress.
Domain organisation. The N-terminal nucleotide binding domain (NBD) (also known as the ATPase domain) is responsible for binding and hydrolyzing ATP. The C-terminal substrate-binding domain (SBD) (also known as peptide-binding domain) binds to the client/substrate proteins. The two domains are allosterically coupled so that, when ATP is bound to the NBD, the SBD binds relatively weakly to clients. When ADP is bound in the NBD, a conformational change enhances the affinity of the SBD for client proteins.
Induction. By heat shock.
Similarity. Belongs to the heat shock protein 70 family.
RefSeq proteins (1): NP_005337* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR013126 | Hsp_70_fam | Family |
| IPR018181 | Heat_shock_70_CS | Conserved_site |
| IPR029047 | HSP70_peptide-bd_sf | Homologous_superfamily |
| IPR029048 | HSP70_C_sf | Homologous_superfamily |
| IPR043129 | ATPase_NBD | Homologous_superfamily |
Pfam: PF00012
UniProt features (70 total): strand 18, helix 18, modified residue 11, binding site 5, mutagenesis site 5, turn 4, region of interest 3, sequence variant 3, initiator methionine 1, chain 1, compositionally biased region 1
Structure
Experimental structures (PDB)
5 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 7F50 | X-RAY DIFFRACTION | 1.7 |
| 7F4Z | X-RAY DIFFRACTION | 1.8 |
| 4J8F | X-RAY DIFFRACTION | 2.7 |
| 6FDT | SOLUTION NMR | |
| 7F4X | X-RAY DIFFRACTION, NEUTRON DIFFRACTION | 1.6,2.199 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P0DMV9-F1 | 89.33 | 0.70 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (5): 339–342; 12–15; 71; 202–204; 268–275
Post-translational modifications (11): 2, 77, 108, 246, 348, 469, 561, 561, 631, 633, 636
Mutagenesis-validated functional residues (5):
| Position | Phenotype |
|---|---|
| 10 | reduces affinity for adp. |
| 77 | no loss of acetylation and atpase activity. exhibits normal protein refolding activity during the early phase but exhibi |
| 77 | significant loss of acetylation and atpase activity. decreased binding to hopx and hsp90 and increased binding to stub1 |
| 199 | reduces affinity for adp. |
| 561 | complete loss of in vitro methylation by mettl21a. |
Function
Pathways and Gene Ontology
Reactome pathways
9 pathways
| ID | Pathway |
|---|---|
| R-HSA-3371453 | Regulation of HSF1-mediated heat shock response |
| R-HSA-3371497 | HSP90 chaperone cycle for steroid hormone receptors (SHR) in the presence of ligand |
| R-HSA-3371568 | Attenuation phase |
| R-HSA-3371571 | HSF1-dependent transactivation |
| R-HSA-6798695 | Neutrophil degranulation |
| R-HSA-9833482 | PKR-mediated signaling |
| R-HSA-9841251 | Mitochondrial unfolded protein response (UPRmt) |
| R-HSA-9918487 | Dengue Virus Genome Translation and Replication |
| R-HSA-3371511 | HSF1 activation |
MSigDB gene sets: 539 (showing top):
GOBP_MYELOID_CELL_DIFFERENTIATION, GOBP_CHROMOSOME_ORGANIZATION, LEE_NEURAL_CREST_STEM_CELL_DN, GOBP_REGULATION_OF_PROTEIN_POLYMERIZATION, REACTOME_INNATE_IMMUNE_SYSTEM, GOBP_REGULATION_OF_PROTEASOMAL_UBIQUITIN_DEPENDENT_PROTEIN_CATABOLIC_PROCESS, BENPORATH_ES_WITH_H3K27ME3, GOBP_POSITIVE_REGULATION_OF_ERYTHROCYTE_DIFFERENTIATION, GOBP_MYELOID_CELL_HOMEOSTASIS, GOBP_REGULATION_OF_MICROTUBULE_BASED_PROCESS, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, GOBP_POSITIVE_REGULATION_OF_INTERLEUKIN_8_PRODUCTION, GOBP_RESPONSE_TO_PEPTIDE, GOBP_CELLULAR_RESPONSE_TO_LIPID, GOCC_SECRETORY_GRANULE
GO Biological Process (25): mRNA catabolic process (GO:0006402), negative regulation of cell population proliferation (GO:0008285), positive regulation of gene expression (GO:0010628), negative regulation of cell growth (GO:0030308), regulation of protein ubiquitination (GO:0031396), negative regulation of protein ubiquitination (GO:0031397), positive regulation of proteasomal ubiquitin-dependent protein catabolic process (GO:0032436), positive regulation of interleukin-8 production (GO:0032757), cellular response to oxidative stress (GO:0034599), cellular response to heat (GO:0034605), protein refolding (GO:0042026), negative regulation of apoptotic process (GO:0043066), positive regulation of erythrocyte differentiation (GO:0045648), ATP metabolic process (GO:0046034), protein stabilization (GO:0050821), obsolete positive regulation of NF-kappaB transcription factor activity (GO:0051092), cellular heat acclimation (GO:0070370), positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway (GO:0070434), cellular response to steroid hormone stimulus (GO:0071383), positive regulation of microtubule nucleation (GO:0090063), negative regulation of inclusion body assembly (GO:0090084), regulation of mitotic spindle assembly (GO:1901673), positive regulation of tumor necrosis factor-mediated signaling pathway (GO:1903265), negative regulation of extrinsic apoptotic signaling pathway in absence of ligand (GO:2001240), symbiont entry into host cell (GO:0046718)
GO Molecular Function (17): virus receptor activity (GO:0001618), G protein-coupled receptor binding (GO:0001664), RNA binding (GO:0003723), signaling receptor binding (GO:0005102), ATP binding (GO:0005524), ATP hydrolysis activity (GO:0016887), enzyme binding (GO:0019899), heat shock protein binding (GO:0031072), ubiquitin protein ligase binding (GO:0031625), histone deacetylase binding (GO:0042826), protein folding chaperone (GO:0044183), obsolete unfolded protein binding (GO:0051082), C3HC4-type RING finger domain binding (GO:0055131), ATP-dependent protein disaggregase activity (GO:0140545), ATP-dependent protein folding chaperone (GO:0140662), nucleotide binding (GO:0000166), protein binding (GO:0005515)
GO Cellular Component (22): extracellular region (GO:0005576), nucleus (GO:0005634), nucleoplasm (GO:0005654), cytoplasm (GO:0005737), mitochondrion (GO:0005739), endoplasmic reticulum (GO:0005783), centrosome (GO:0005813), centriole (GO:0005814), cytosol (GO:0005829), plasma membrane (GO:0005886), focal adhesion (GO:0005925), inclusion body (GO:0016234), aggresome (GO:0016235), nuclear speck (GO:0016607), vesicle (GO:0031982), protein-containing complex (GO:0032991), perinuclear region of cytoplasm (GO:0048471), extracellular exosome (GO:0070062), blood microparticle (GO:0072562), ficolin-1-rich granule lumen (GO:1904813), ribonucleoprotein complex (GO:1990904), cytoskeleton (GO:0005856)
Reactome top-level categories
Rollup of top-6 pathways:
| Category | Pathways |
|---|---|
| Cellular response to heat stress | 3 |
| Cellular responses to stress | 2 |
| HSF1-dependent transactivation | 1 |
| Innate Immune System | 1 |
| Antimicrobial mechanism of IFN-stimulated genes | 1 |
| Dengue Virus Infection | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 6 |
| protein binding | 4 |
| cytoplasm | 4 |
| ATP-dependent activity | 3 |
| intracellular membrane-bounded organelle | 3 |
| negative regulation of cellular process | 2 |
| protein ubiquitination | 2 |
| protein folding | 2 |
| intracellular anatomical structure | 2 |
| microtubule organizing center | 2 |
| RNA catabolic process | 1 |
| negative regulation of gene expression | 1 |
| mRNA metabolic process | 1 |
| cell population proliferation | 1 |
| regulation of cell population proliferation | 1 |
| gene expression | 1 |
| regulation of gene expression | 1 |
| positive regulation of macromolecule biosynthetic process | 1 |
| regulation of cell growth | 1 |
| cell growth | 1 |
| negative regulation of growth | 1 |
| regulation of protein modification by small protein conjugation or removal | 1 |
| regulation of protein ubiquitination | 1 |
| negative regulation of protein modification by small protein conjugation or removal | 1 |
| regulation of proteasomal ubiquitin-dependent protein catabolic process | 1 |
| proteasome-mediated ubiquitin-dependent protein catabolic process | 1 |
| positive regulation of proteasomal protein catabolic process | 1 |
| positive regulation of ubiquitin-dependent protein catabolic process | 1 |
| positive regulation of cytokine production | 1 |
| interleukin-8 production | 1 |
| regulation of interleukin-8 production | 1 |
| response to oxidative stress | 1 |
| cellular response to chemical stress | 1 |
| response to heat | 1 |
| cellular response to stress | 1 |
| apoptotic process | 1 |
| regulation of apoptotic process | 1 |
| negative regulation of programmed cell death | 1 |
| erythrocyte differentiation | 1 |
| positive regulation of myeloid cell differentiation | 1 |
Protein interactions and networks
STRING
0 interactions, top by confidence (×1000):
IntAct
69 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| MAP3K14 | CHUK | psi-mi:“MI:0914”(association) | 0.950 |
| PSMB2 | PSMD11 | psi-mi:“MI:0914”(association) | 0.730 |
| CRK | ARHGAP42 | psi-mi:“MI:0914”(association) | 0.530 |
| GNB2 | PFDN6 | psi-mi:“MI:0914”(association) | 0.530 |
| HSPA1B | F2RL1 | psi-mi:“MI:0915”(physical association) | 0.510 |
| HSPA1B | psi-mi:“MI:0915”(physical association) | 0.400 | |
| SULT1C4 | HSPA1B | psi-mi:“MI:0915”(physical association) | 0.400 |
| HSPA1B | BAG2 | psi-mi:“MI:0915”(physical association) | 0.400 |
| MAPKAPK2 | HSPA1B | psi-mi:“MI:0915”(physical association) | 0.400 |
| HSPA1B | MTNAP1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| TK2 | psi-mi:“MI:0915”(physical association) | 0.400 | |
| CTU1 | HSPA1B | psi-mi:“MI:0914”(association) | 0.350 |
| ANG | DDX39A | psi-mi:“MI:0914”(association) | 0.350 |
| P | psi-mi:“MI:0914”(association) | 0.350 | |
| M | psi-mi:“MI:0914”(association) | 0.350 | |
| N | DHX15 | psi-mi:“MI:0914”(association) | 0.350 |
| N | PHGDH | psi-mi:“MI:0914”(association) | 0.350 |
| DDX3X | psi-mi:“MI:0914”(association) | 0.350 | |
| USP29 | HSPA1B | psi-mi:“MI:0914”(association) | 0.350 |
| ARHGAP18 | CLTB | psi-mi:“MI:0914”(association) | 0.350 |
| CAPZB | ENAH | psi-mi:“MI:0914”(association) | 0.350 |
| CLTA | CLTB | psi-mi:“MI:0914”(association) | 0.350 |
| CSNK2A1 | RPS3A | psi-mi:“MI:0914”(association) | 0.350 |
| DNAJA1 | HSPA8 | psi-mi:“MI:0914”(association) | 0.350 |
| DNAJB1 | HSPA8 | psi-mi:“MI:0914”(association) | 0.350 |
ESM2 similar proteins: A2Q0Z1, O59855, O65719, O73885, P02827, P08106, P08108, P08418, P09446, P0DMV8, P0DMV9, P0DMW0, P0DMW1, P11142, P11147, P14659, P17156, P19120, P19378, P22953, P27541, P34930, P34933, P36415, P41753, P47773, P53421, P53623, P54652, P63017, P63018, Q01233, Q01877, Q05944, Q06248, Q10265, Q27965, Q27975, Q4U0F3, Q557E0
Diamond homologs: A0A0D1CD96, A0A509AJG0, A2Q0Z1, A5A8V7, F5HB71, G3I8R9, J9VZ70, O24581, O59855, O73885, O93866, P02827, P06761, P07823, P08108, P08418, P09189, P0CB32, P0DMV8, P0DMV9, P10591, P10592, P11021, P11142, P14659, P16474, P17156, P17879, P19120, P19208, P19378, P20029, P20163, P22010, P22202, P24067, P26413, P27420, P29844, P34933
SIGNOR signaling
8 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| HSPA1B | “up-regulates quantity” | ENPP1 | “post transcriptional regulation” |
| HSPA1B | “up-regulates quantity by stabilization” | NOD2 | binding |
| FOXA1 | “up-regulates quantity by expression” | HSPA1B | “transcriptional regulation” |
| STAT3 | “up-regulates quantity by expression” | HSPA1B | “transcriptional regulation” |
| HSPH1 | “up-regulates quantity by expression” | HSPA1B | “transcriptional regulation” |
| BAG5 | “down-regulates activity” | HSPA1B | binding |
| HSPA1B | “up-regulates activity” | GSTA4 | relocalization |
| HSPA1B | “up-regulates quantity by stabilization” | PACRG | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 97 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| NIK–>noncanonical NF-kB signaling | 5 | 16.3× | 3e-03 |
| Regulation of HSF1-mediated heat shock response | 8 | 15.9× | 2e-05 |
| Dectin-1 mediated noncanonical NF-kB signaling | 5 | 15.4× | 3e-03 |
| HSP90 chaperone cycle for steroid hormone receptors (SHR) in the presence of ligand | 5 | 13.8× | 4e-03 |
| Regulation of PTEN stability and activity | 5 | 13.2× | 5e-03 |
| CLEC7A (Dectin-1) signaling | 5 | 10.2× | 8e-03 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| response to unfolded protein | 7 | 24.2× | 5e-06 |
| protein folding | 12 | 14.3× | 3e-08 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
28 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 23 |
| Likely benign | 3 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 6:31829907:G:GC | acceptor_gain | 0.2600 |
AlphaMissense
4221 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 6:31827984:G:C | G12R | 1.000 |
| 6:31827985:G:A | G12D | 1.000 |
| 6:31827985:G:T | G12V | 1.000 |
| 6:31827988:C:T | T13I | 1.000 |
| 6:31828005:G:T | G19W | 1.000 |
| 6:31828043:C:A | N31K | 1.000 |
| 6:31828043:C:G | N31K | 1.000 |
| 6:31828068:A:C | S40R | 1.000 |
| 6:31828070:C:A | S40R | 1.000 |
| 6:31828070:C:G | S40R | 1.000 |
| 6:31828105:G:A | G52E | 1.000 |
| 6:31828114:C:A | A55D | 1.000 |
| 6:31828163:G:C | K71N | 1.000 |
| 6:31828163:G:T | K71N | 1.000 |
| 6:31828390:C:A | P147Q | 1.000 |
| 6:31828390:C:G | P147R | 1.000 |
| 6:31828393:C:A | A148D | 1.000 |
| 6:31828398:T:C | F150L | 1.000 |
| 6:31828400:C:A | F150L | 1.000 |
| 6:31828400:C:G | F150L | 1.000 |
| 6:31828412:G:C | Q154H | 1.000 |
| 6:31828412:G:T | Q154H | 1.000 |
| 6:31828413:C:A | R155S | 1.000 |
| 6:31828414:G:C | R155P | 1.000 |
| 6:31828435:G:A | G162D | 1.000 |
| 6:31828474:A:C | E175A | 1.000 |
| 6:31828474:A:T | E175V | 1.000 |
| 6:31828483:C:A | A178D | 1.000 |
| 6:31828486:C:A | A179D | 1.000 |
| 6:31828546:A:C | D199A | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000261968 (6:31830136 G>T), RS1000695337 (6:31827760 C>G,T), RS1000762955 (6:31830235 A>T), RS1001260474 (6:31829224 C>T), RS1002874434 (6:31827603 TG>T,TGG), RS1003259906 (6:31826065 T>C,G), RS1004209616 (6:31830615 C>G,T), RS1004544458 (6:31827860 G>C), RS1005137496 (6:31827169 T>C), RS1005438599 (6:31826763 A>G), RS1006217811 (6:31827232 G>C,T), RS1006499535 (6:31827454 C>A,T), RS1007339512 (6:31827084 A>G), RS1010302802 (6:31827621 G>A), RS1012607512 (6:31826032 C>G)
Disease associations
OMIM: gene MIM:603012 | disease phenotypes: MIM:606963
GenCC curated gene-disease
Mondo (1): chronic obstructive pulmonary disease (MONDO:0005002)
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
25 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST004131_25 | Inflammatory bowel disease | 2.000000e-31 |
| GCST004133_79 | Ulcerative colitis | 5.000000e-65 |
| GCST004521_114 | Autism spectrum disorder or schizophrenia | 3.000000e-17 |
| GCST004521_117 | Autism spectrum disorder or schizophrenia | 3.000000e-15 |
| GCST004521_118 | Autism spectrum disorder or schizophrenia | 3.000000e-15 |
| GCST004521_126 | Autism spectrum disorder or schizophrenia | 2.000000e-10 |
| GCST004521_154 | Autism spectrum disorder or schizophrenia | 3.000000e-08 |
| GCST004521_17 | Autism spectrum disorder or schizophrenia | 2.000000e-12 |
| GCST004521_173 | Autism spectrum disorder or schizophrenia | 4.000000e-14 |
| GCST004521_209 | Autism spectrum disorder or schizophrenia | 5.000000e-16 |
| GCST004521_211 | Autism spectrum disorder or schizophrenia | 5.000000e-15 |
| GCST004521_213 | Autism spectrum disorder or schizophrenia | 5.000000e-13 |
| GCST004521_224 | Autism spectrum disorder or schizophrenia | 5.000000e-10 |
| GCST004521_227 | Autism spectrum disorder or schizophrenia | 4.000000e-12 |
| GCST004521_265 | Autism spectrum disorder or schizophrenia | 7.000000e-14 |
| GCST004521_281 | Autism spectrum disorder or schizophrenia | 5.000000e-09 |
| GCST004521_296 | Autism spectrum disorder or schizophrenia | 6.000000e-18 |
| GCST004521_45 | Autism spectrum disorder or schizophrenia | 2.000000e-16 |
| GCST004521_70 | Autism spectrum disorder or schizophrenia | 8.000000e-20 |
| GCST004521_81 | Autism spectrum disorder or schizophrenia | 1.000000e-14 |
| GCST008916_30 | Asthma | 1.000000e-09 |
| GCST008917_2 | Asthma (childhood onset) | 4.000000e-07 |
| GCST008921_1 | Asthma and major depressive disorder | 2.000000e-16 |
| GCST009070_2 | Eosinophilic esophagitis | 3.000000e-09 |
| GCST011426_16 | Systemic lupus erythematosus | 6.000000e-06 |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D029424 | Pulmonary Disease, Chronic Obstructive | C08.381.495.389; C23.550.291.500.875 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL3885585 (PROTEIN FAMILY)
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: other protein — Heat shock proteins
ChEMBL bioactivities
4 potent at pChembl≥5 of 4 total, top 4 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 6.79 | Kd | 162.6 | nM | CHEMBL3752910 |
| 6.74 | ED50 | 181.1 | nM | CHEMBL3752910 |
| 5.84 | Kd | 1449 | nM | CHEMBL5653589 |
| 5.79 | ED50 | 1614 | nM | CHEMBL5653589 |
PubChem BioAssay actives
40 with measured affinity, of 132 total; 23 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-[[(2R,3S,4R,5R)-5-[6-amino-8-(quinolin-6-ylmethylamino)purin-9-yl]-3,4-dihydroxyoxolan-2-yl]methoxymethyl]benzonitrile | 1799196: HSP70 Biacore Direct Binding Assay from Article 10.1021/jm801627a: “Novel adenosine-derived inhibitors of 70 kDa heat shock protein, discovered through structure-based design.” | kd | 0.0500 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-(quinolin-6-ylmethylamino)purin-9-yl]-5-[[4-(trifluoromethyl)phenyl]methoxymethyl]oxolane-3,4-diol | 1799196: HSP70 Biacore Direct Binding Assay from Article 10.1021/jm801627a: “Novel adenosine-derived inhibitors of 70 kDa heat shock protein, discovered through structure-based design.” | kd | 0.0600 | uM |
| [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] hydrogen phosphate | 1799593: Fluorescence-Polarization (FP) Binding Assay from Article 10.1021/jm101625x: “Adenosine-derived inhibitors of 78 kDa glucose regulated protein (Grp78) ATPase: insights into isoform selectivity.” | ki | 0.1100 | uM |
| 4-[[(2R,3S,4R,5R)-5-[6-amino-8-[(3,4-dichlorophenyl)methylamino]purin-9-yl]-3,4-dihydroxyoxolan-2-yl]methoxymethyl]benzonitrile | 1799593: Fluorescence-Polarization (FP) Binding Assay from Article 10.1021/jm101625x: “Adenosine-derived inhibitors of 78 kDa glucose regulated protein (Grp78) ATPase: insights into isoform selectivity.” | ki | 0.1200 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-(quinolin-6-ylmethylamino)purin-9-yl]-5-[(3,4,5-trifluorophenyl)methoxymethyl]oxolane-3,4-diol | 1799196: HSP70 Biacore Direct Binding Assay from Article 10.1021/jm801627a: “Novel adenosine-derived inhibitors of 70 kDa heat shock protein, discovered through structure-based design.” | kd | 0.1200 | uM |
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2148550: Binding affinity to human HSPA1B/HSPA1A incubated for 45 mins by Kinobead based pull down assay | kd | 0.1626 | uM |
| 4-[[(2R,3S,4R,5R)-5-[6-amino-8-(benzylamino)purin-9-yl]-3,4-dihydroxyoxolan-2-yl]methoxymethyl]benzonitrile | 1799196: HSP70 Biacore Direct Binding Assay from Article 10.1021/jm801627a: “Novel adenosine-derived inhibitors of 70 kDa heat shock protein, discovered through structure-based design.” | kd | 0.2000 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-(methylamino)purin-9-yl]-5-(pyridin-3-ylmethoxymethyl)oxolane-3,4-diol | 1799593: Fluorescence-Polarization (FP) Binding Assay from Article 10.1021/jm101625x: “Adenosine-derived inhibitors of 78 kDa glucose regulated protein (Grp78) ATPase: insights into isoform selectivity.” | ki | 0.4500 | uM |
| [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] phosphono hydrogen phosphate | 1799195: HSP70 Fluorescence Polarization Assay from Article 10.1021/jm801627a: “Novel adenosine-derived inhibitors of 70 kDa heat shock protein, discovered through structure-based design.” | ic50 | 0.5000 | uM |
| [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl phosphono hydrogen phosphate | 1799195: HSP70 Fluorescence Polarization Assay from Article 10.1021/jm801627a: “Novel adenosine-derived inhibitors of 70 kDa heat shock protein, discovered through structure-based design.” | ic50 | 0.5000 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-[(3,4-dichlorophenyl)methylamino]purin-9-yl]-5-(phenylmethoxymethyl)oxolane-3,4-diol | 1799593: Fluorescence-Polarization (FP) Binding Assay from Article 10.1021/jm101625x: “Adenosine-derived inhibitors of 78 kDa glucose regulated protein (Grp78) ATPase: insights into isoform selectivity.” | ki | 1.0500 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-(methylamino)purin-9-yl]-5-(phenylmethoxymethyl)oxolane-3,4-diol | 1799593: Fluorescence-Polarization (FP) Binding Assay from Article 10.1021/jm101625x: “Adenosine-derived inhibitors of 78 kDa glucose regulated protein (Grp78) ATPase: insights into isoform selectivity.” | ki | 1.1000 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-(quinolin-6-ylmethylamino)purin-9-yl]-5-(hydroxymethyl)oxolane-3,4-diol | 1799593: Fluorescence-Polarization (FP) Binding Assay from Article 10.1021/jm101625x: “Adenosine-derived inhibitors of 78 kDa glucose regulated protein (Grp78) ATPase: insights into isoform selectivity.” | ki | 1.2900 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-[(3,4-dichlorophenyl)methylamino]purin-9-yl]-5-(methoxymethyl)oxolane-3,4-diol | 1799593: Fluorescence-Polarization (FP) Binding Assay from Article 10.1021/jm101625x: “Adenosine-derived inhibitors of 78 kDa glucose regulated protein (Grp78) ATPase: insights into isoform selectivity.” | ki | 1.4400 | uM |
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2148550: Binding affinity to human HSPA1B/HSPA1A incubated for 45 mins by Kinobead based pull down assay | kd | 1.4489 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-[(3,4-dichlorophenyl)methylamino]purin-9-yl]-5-[(3,4,5-trifluorophenyl)methoxymethyl]oxolane-3,4-diol | 1799195: HSP70 Fluorescence Polarization Assay from Article 10.1021/jm801627a: “Novel adenosine-derived inhibitors of 70 kDa heat shock protein, discovered through structure-based design.” | ic50 | 1.7000 | uM |
| 2-[[(2R,3S,4R,5R)-5-[6-amino-8-(methylamino)purin-9-yl]-3,4-dihydroxyoxolan-2-yl]methoxy]acetamide | 1799593: Fluorescence-Polarization (FP) Binding Assay from Article 10.1021/jm101625x: “Adenosine-derived inhibitors of 78 kDa glucose regulated protein (Grp78) ATPase: insights into isoform selectivity.” | ki | 1.8500 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-(methylamino)purin-9-yl]-5-(cyclohexylmethoxymethyl)oxolane-3,4-diol | 1799593: Fluorescence-Polarization (FP) Binding Assay from Article 10.1021/jm101625x: “Adenosine-derived inhibitors of 78 kDa glucose regulated protein (Grp78) ATPase: insights into isoform selectivity.” | ki | 4.0700 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-[(3,4-dichlorophenyl)methylamino]purin-9-yl]-5-(hydroxymethyl)oxolane-3,4-diol | 1799593: Fluorescence-Polarization (FP) Binding Assay from Article 10.1021/jm101625x: “Adenosine-derived inhibitors of 78 kDa glucose regulated protein (Grp78) ATPase: insights into isoform selectivity.” | ki | 4.3100 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-(quinolin-2-ylmethylamino)purin-9-yl]-5-(hydroxymethyl)oxolane-3,4-diol | 1799593: Fluorescence-Polarization (FP) Binding Assay from Article 10.1021/jm101625x: “Adenosine-derived inhibitors of 78 kDa glucose regulated protein (Grp78) ATPase: insights into isoform selectivity.” | ki | 4.3200 | uM |
| (2R,3R,4S,5R)-2-(6,8-diaminopurin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol | 1799593: Fluorescence-Polarization (FP) Binding Assay from Article 10.1021/jm101625x: “Adenosine-derived inhibitors of 78 kDa glucose regulated protein (Grp78) ATPase: insights into isoform selectivity.” | ki | 4.4600 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-(1,3-benzodioxol-5-ylmethylamino)purin-9-yl]-5-(hydroxymethyl)oxolane-3,4-diol | 1799195: HSP70 Fluorescence Polarization Assay from Article 10.1021/jm801627a: “Novel adenosine-derived inhibitors of 70 kDa heat shock protein, discovered through structure-based design.” | ic50 | 4.9000 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-(methylamino)purin-9-yl]-5-(hydroxymethyl)oxolane-3,4-diol | 1799593: Fluorescence-Polarization (FP) Binding Assay from Article 10.1021/jm101625x: “Adenosine-derived inhibitors of 78 kDa glucose regulated protein (Grp78) ATPase: insights into isoform selectivity.” | ki | 8.3000 | uM |
CTD chemical–gene interactions
172 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | affects methylation, affects cotreatment, increases expression | 7 |
| Arsenic Trioxide | affects expression, increases expression, affects response to substance | 7 |
| Cadmium Chloride | decreases expression, increases abundance, increases expression, increases methylation | 7 |
| Cadmium | increases abundance, increases expression | 5 |
| Tobacco Smoke Pollution | increases methylation, affects expression, increases expression | 5 |
| bisphenol A | affects expression, affects cotreatment, decreases methylation, decreases expression | 4 |
| Arsenic | increases reaction, increases expression, affects methylation, decreases expression, affects binding (+1 more) | 4 |
| Benzo(a)pyrene | affects methylation, increases expression | 4 |
| Cisplatin | affects cotreatment, increases expression, decreases expression, increases reaction | 4 |
| Quercetin | decreases expression, decreases phosphorylation | 4 |
| cobaltous chloride | increases expression | 3 |
| Bortezomib | increases expression, affects response to substance, decreases response to substance | 3 |
| Copper | affects binding, increases expression, decreases expression | 3 |
| Cyclosporine | increases expression | 3 |
| Particulate Matter | affects expression, increases reaction, decreases expression, increases abundance, affects cotreatment | 3 |
| methylmercuric chloride | increases expression | 2 |
| arsenite | affects binding, increases reaction, increases expression | 2 |
| chloropicrin | increases expression | 2 |
| Acetylcysteine | decreases reaction, increases expression | 2 |
| Air Pollutants | affects cotreatment, increases abundance, increases expression, decreases expression | 2 |
| Disulfiram | affects binding, decreases expression, increases expression | 2 |
| Hydrogen Peroxide | increases expression | 2 |
| Oxygen | decreases expression | 2 |
| Rotenone | decreases expression | 2 |
| Silver | increases expression | 2 |
| Dronabinol | affects cotreatment, increases expression, decreases expression | 2 |
| Tunicamycin | decreases expression | 2 |
| Zinc | affects abundance, affects cotreatment, increases expression | 2 |
| aristolochic acid I | increases expression | 1 |
| bisphenol F | increases expression | 1 |
ChEMBL screening assays
3 unique, capped per target: 3 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3803750 | Binding | Binding affinity to HSPA1A/HSPA1B in HEK293 proteomes assessed as spectral count ratio at 20 uM incubated for 16 hrs by TAMRA biotin-azide dye based LC-MS/MS analysis relative to control | Characterizing the Covalent Targets of a Small Molecule Inhibitor of the Lysine Acetyltransferase P300. — ACS Med Chem Lett |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00120978 | PHASE4 | UNKNOWN | Can Advair and Flovent Reduce Systemic Inflammation Related to Chronic Obstructive Pulmonary Disease (COPD)? A Multi-Center Randomized Controlled Trial |
| NCT00134979 | PHASE4 | COMPLETED | Formoterol Certihaler, Tiotropium HandiHaler and Tiotropium HandiHaler in Combination With Formoterol Certihaler in Patients With Stable Chronic Obstructive Pulmonary Disease |
| NCT00158847 | PHASE4 | TERMINATED | Modification Of Disease Outcome In COPD |
| NCT00170222 | PHASE4 | COMPLETED | Placebo Versus Antibiotics in Acute Exacerbations of Chronic Obstructive Pulmonary Disease (COPD) |
| NCT00175565 | PHASE4 | COMPLETED | Inhaled Steroid Reduces Systemic Inflammation in COPD |
| NCT00181207 | PHASE4 | COMPLETED | Airway Clearance for Prevention of Chronic Obstructive Pulmonary Disease (COPD) Exacerbation |
| NCT00186706 | PHASE4 | COMPLETED | Selenium Supplementation in Chronic Obstructive Pulmonary Disease (COPD) Patients |
| NCT00190437 | PHASE4 | COMPLETED | ANTEAB: a Study of Early Antibiotherapy in the ICU Management of Acute Exacerbations of COPD |
| NCT00202176 | PHASE4 | COMPLETED | Effects of Bronchodilators in Mild Chronic Obstructive Pulmonary Disease (COPD) |
| NCT00202189 | PHASE4 | COMPLETED | Effects of Inhaled Corticosteroids in Chronic Obstructive Pulmonary Disease (COPD) |
| NCT00232674 | PHASE4 | COMPLETED | Efficacy Study of the Effect of Budesonide on Emphysema |
| NCT00288548 | PHASE4 | UNKNOWN | Metoprolol and Formoterol in Chronic Obstructive Pulmonary Disease (COPD) |
| NCT00291408 | PHASE4 | WITHDRAWN | Effect of Symbicort on HAT and HDAC in Sputum Macrophages of COPD |
| NCT00291460 | PHASE4 | UNKNOWN | Inspiratory Muscle Training in Hypercapnic COPD |
| NCT00292838 | PHASE4 | COMPLETED | Relative Potency of Inhaled Corticosteroids |
| NCT00311961 | PHASE4 | COMPLETED | Intravenous Versus Oral Administration of Prednisolone in Exacerbations of Chronic Obstructive Pulmonary Disease (COPD) |
| NCT00316992 | PHASE4 | COMPLETED | Safety of Ramelteon in Subjects With Chronic Obstructive Pulmonary Disease |
| NCT00331656 | PHASE4 | UNKNOWN | Comparative Study of Non-Invasive Mask Ventilation vs Cuirass Ventilation in Patients With Acute Respiratory Failure. |
| NCT00335621 | PHASE4 | WITHDRAWN | Replacement of Nebulised Ipratropium With Inhaled Tiotropium in Stable Chronic Obstructive Pulmonary Disease (COPD) |
| NCT00354354 | PHASE4 | COMPLETED | Bronchodilators and Oxygen Kinetics With Exercise in Chronic Obstructive Pulmonary Disease (COPD) Patients |
| NCT00379028 | PHASE4 | COMPLETED | Airway Clearance Study |
| NCT00405236 | PHASE4 | COMPLETED | Effect of Tiotropium on Inflammation and Exacerbations in COPD |
| NCT00412204 | PHASE4 | COMPLETED | Study to Evaluate the Effects of Tiotropium Bromide on Chronic Obstructive Pulmonary Disease (COPD) During Exercise |
| NCT00424528 | PHASE4 | COMPLETED | Efficacy Safety Study of Arformoterol/Tiotropium Combination Versus Either Therapy Alone in Chronic Obstructive Pulmonary Disease (COPD) |
| NCT00440245 | PHASE4 | COMPLETED | Bronchoprotection of Salbutamol in Asthma and Chronic Obstructive Pulmonary Disease |
| NCT00440687 | PHASE4 | COMPLETED | Withdrawal of Inhaled Corticosteroids in Patients With COPD in Primary Care |
| NCT00489853 | PHASE4 | COMPLETED | Evaluation of Efficacy on Exercise Tolerance of Symbicort (Budesonide/Formoterol) Compared to Placebo and Oxis in Patients With Severe COPD |
| NCT00491803 | PHASE4 | COMPLETED | Sildenafil Effects on Pulmonary Haemodynamics and Gas Exchange in Chronic Obstructive Pulmonary Disease (COPD) |
| NCT00495586 | PHASE4 | COMPLETED | Effectiveness of Antibiotic Therapy for Exacerbations of Chronic Obstructive Pulmonary Disease |
| NCT00525564 | PHASE4 | COMPLETED | Effects of Salmeterol on Walking Capacity in Patients With COPD |
| NCT00532584 | PHASE4 | WITHDRAWN | Effect of Steroids on Gene Expression in the Healthy Smokers Lungs |
| NCT00542880 | PHASE4 | COMPLETED | Evaluation of Onset of Effect in Patients With Severe Chronic Obstructive Pulmonary Disease (COPD) Treated With Symbicort® Compared to Seretide® |
| NCT00561886 | PHASE4 | COMPLETED | Change of Inspiratory Peak Flow in COPD |
| NCT00569270 | PHASE4 | COMPLETED | Dynamic Hyperinflation and Tiotropium |
| NCT00571428 | PHASE4 | COMPLETED | Efficacy Safety Study of Arformoterol QD Dosing Versus BID Dosing in COPD |
| NCT00578968 | PHASE4 | COMPLETED | Cardiac Limitations in Chronic Obstructive Pulmonary Disease: Benefits of Bronchodilation |
| NCT00592033 | PHASE4 | COMPLETED | Effect of Oxygen in Normoxaemic COPD Patients Who Desaturate During Exercise |
| NCT00628225 | PHASE4 | COMPLETED | Smoking Cessation in Patients With COPD (SMOCC) in General Practice |
| NCT00633776 | PHASE4 | WITHDRAWN | Perforomist Versus Foradil Evaluated by Inspiratory Capacity and High Resolution Computed Tomography (HRCT) |
| NCT00639236 | PHASE4 | COMPLETED | Effectiveness and Safety of Inhaling Hypertonic Saline in Patients With Chronic Obstructive Pulmonary Disease |
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): eosinophilic esophagitis