HSPA8
gene geneOn this page
Also known as HSC71HSC70HSP73
Summary
HSPA8 (heat shock protein family A (Hsp70) member 8, HGNC:5241) is a protein-coding gene on chromosome 11q24.1, encoding Heat shock cognate 71 kDa protein (P11142). Molecular chaperone implicated in a wide variety of cellular processes, including protection of the proteome from stress, folding and transport of newly synthesized polypeptides, chaperone-mediated autophagy, activation of proteolysis of misfolded proteins, formation and dissoci…. It is a selective cancer dependency (DepMap: 56.5% of cell lines).
This gene encodes a member of the heat shock protein 70 family, which contains both heat-inducible and constitutively expressed members. This protein belongs to the latter group, which are also referred to as heat-shock cognate proteins. It functions as a chaperone, and binds to nascent polypeptides to facilitate correct folding. It also functions as an ATPase in the disassembly of clathrin-coated vesicles during transport of membrane components through the cell. Alternatively spliced transcript variants encoding different isoforms have been found for this gene.
Source: NCBI Gene 3312 — RefSeq curated summary.
At a glance
- GWAS associations: 7
- Clinical variants (ClinVar): 53 total
- Druggable target: yes — 4 molecules with ChEMBL bioactivity
- Cancer dependency (DepMap): dependent in 56.5% of screened cell lines
- MANE Select transcript:
NM_006597
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:5241 |
| Approved symbol | HSPA8 |
| Name | heat shock protein family A (Hsp70) member 8 |
| Location | 11q24.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | HSC71, HSC70, HSP73 |
| Ensembl gene | ENSG00000109971 |
| Ensembl biotype | protein_coding |
| OMIM | 600816 |
| Entrez | 3312 |
Gene structure
Transcript identifiers
Ensembl transcripts: 37 — 30 protein_coding, 5 retained_intron, 2 protein_coding_CDS_not_defined
ENST00000227378, ENST00000453788, ENST00000524552, ENST00000524590, ENST00000525463, ENST00000525624, ENST00000526110, ENST00000526686, ENST00000526862, ENST00000527387, ENST00000527983, ENST00000528292, ENST00000530391, ENST00000531063, ENST00000532091, ENST00000532167, ENST00000532182, ENST00000532636, ENST00000532780, ENST00000533238, ENST00000533540, ENST00000534319, ENST00000534567, ENST00000534624, ENST00000876974, ENST00000876975, ENST00000876976, ENST00000935611, ENST00000935612, ENST00000935613, ENST00000935614, ENST00000935615, ENST00000935616, ENST00000935617, ENST00000971745, ENST00000971746, ENST00000971747
RefSeq mRNA: 2 — MANE Select: NM_006597
NM_006597, NM_153201
CCDS: CCDS44754, CCDS8440
Canonical transcript exons
ENST00000534624 — 9 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000994832 | 123062064 | 123062136 |
| ENSE00001101375 | 123058632 | 123058830 |
| ENSE00001101382 | 123059059 | 123059261 |
| ENSE00001101385 | 123058252 | 123058484 |
| ENSE00002157784 | 123057489 | 123057919 |
| ENSE00003473688 | 123061120 | 123061329 |
| ENSE00003540604 | 123059473 | 123060028 |
| ENSE00003560408 | 123060116 | 123060268 |
| ENSE00003791394 | 123060593 | 123060798 |
Expression profiles
Bgee: expression breadth ubiquitous, 156 present calls, max score 99.92.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 802.3264 / max 10631.3983, expressed in 1828 samples.
FANTOM5 promoters (6 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 122888 | 795.4134 | 1828 |
| 122889 | 3.0649 | 1395 |
| 122879 | 1.4868 | 764 |
| 122886 | 1.0760 | 713 |
| 122885 | 1.0064 | 682 |
| 122890 | 0.2789 | 98 |
Top tissues by expression
156 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| corpus callosum | UBERON:0002336 | 99.92 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 99.87 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 99.81 | gold quality |
| prefrontal cortex | UBERON:0000451 | 99.80 | gold quality |
| frontal cortex | UBERON:0001870 | 99.80 | gold quality |
| frontal lobe | UBERON:0016525 | 99.80 | gold quality |
| cerebellum | UBERON:0002037 | 99.79 | gold quality |
| cerebellar cortex | UBERON:0002129 | 99.79 | gold quality |
| right frontal lobe | UBERON:0002810 | 99.79 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 99.78 | gold quality |
| ventricular zone | UBERON:0003053 | 99.77 | gold quality |
| cortical plate | UBERON:0005343 | 99.76 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 99.73 | gold quality |
| embryo | UBERON:0000922 | 99.73 | gold quality |
| ganglionic eminence | UBERON:0004023 | 99.73 | gold quality |
| right testis | UBERON:0004534 | 99.73 | gold quality |
| adrenal tissue | UBERON:0018303 | 99.73 | gold quality |
| primary visual cortex | UBERON:0002436 | 99.71 | gold quality |
| islet of Langerhans | UBERON:0000006 | 99.70 | gold quality |
| cerebral cortex | UBERON:0000956 | 99.70 | gold quality |
| left testis | UBERON:0004533 | 99.69 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 99.69 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 99.67 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 99.67 | gold quality |
| brain | UBERON:0000955 | 99.66 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 99.66 | gold quality |
| granulocyte | CL:0000094 | 99.65 | gold quality |
| stromal cell of endometrium | CL:0002255 | 99.65 | gold quality |
| body of pancreas | UBERON:0001150 | 99.65 | gold quality |
| pancreas | UBERON:0001264 | 99.65 | gold quality |
Single-cell (SCXA)
Detected in 23 experiment(s), a significant marker in 11.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-6678 | yes | 13442.82 |
| E-CURD-95 | yes | 4400.26 |
| E-GEOD-149689 | yes | 836.60 |
| E-HCAD-1 | yes | 91.50 |
| E-CURD-122 | yes | 57.92 |
| E-CURD-88 | yes | 46.35 |
| E-GEOD-135922 | yes | 25.43 |
| E-CURD-46 | yes | 21.83 |
| E-MTAB-9543 | yes | 21.04 |
| E-MTAB-10042 | yes | 9.69 |
| E-CURD-112 | yes | 3.62 |
| E-MTAB-7008 | no | 9244.27 |
| E-MTAB-10137 | no | 4298.88 |
| E-CURD-97 | no | 4138.72 |
| E-MTAB-9689 | no | 1662.83 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): KLF4, MYC, SKIL, STAT5A, TP53
miRNA regulators (miRDB)
61 targeting HSPA8, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-497-5P | 99.92 | 71.83 | 2674 |
| HSA-MIR-1297 | 99.91 | 73.41 | 3162 |
| HSA-MIR-454-3P | 99.91 | 74.01 | 1925 |
| HSA-MIR-106A-5P | 99.90 | 73.94 | 2683 |
| HSA-MIR-4295 | 99.90 | 73.11 | 1838 |
| HSA-MIR-130A-3P | 99.90 | 73.31 | 1861 |
| HSA-MIR-130B-3P | 99.90 | 73.27 | 1850 |
| HSA-MIR-301A-3P | 99.90 | 73.15 | 1839 |
| HSA-MIR-301B-3P | 99.90 | 73.19 | 1836 |
| HSA-MIR-3666 | 99.90 | 73.24 | 1833 |
| HSA-MIR-15A-5P | 99.90 | 72.80 | 2787 |
| HSA-MIR-15B-5P | 99.90 | 72.78 | 2798 |
| HSA-MIR-16-5P | 99.90 | 72.80 | 2780 |
| HSA-MIR-195-5P | 99.90 | 72.81 | 2805 |
| HSA-MIR-17-5P | 99.89 | 73.83 | 2665 |
| HSA-MIR-424-5P | 99.89 | 71.90 | 2641 |
| HSA-MIR-6838-5P | 99.89 | 71.94 | 2690 |
| HSA-MIR-106B-5P | 99.88 | 74.72 | 2795 |
| HSA-MIR-20A-5P | 99.88 | 74.76 | 2769 |
| HSA-MIR-20B-5P | 99.88 | 74.01 | 2621 |
| HSA-MIR-519D-3P | 99.88 | 73.97 | 2607 |
| HSA-MIR-526B-3P | 99.88 | 74.06 | 2587 |
| HSA-MIR-93-5P | 99.88 | 73.98 | 2606 |
| HSA-MIR-221-3P | 99.86 | 71.56 | 1329 |
| HSA-MIR-222-3P | 99.86 | 71.35 | 1337 |
| HSA-MIR-548AR-3P | 99.85 | 71.26 | 3889 |
| HSA-MIR-4307 | 99.82 | 70.45 | 3374 |
| HSA-MIR-205-5P | 99.81 | 70.05 | 1557 |
| HSA-MIR-26A-5P | 99.78 | 73.52 | 2303 |
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 56.5% of screened cell lines.
Literature-anchored findings (GeneRIF, showing 40)
- Tumor-derived HSP70 peptide complexes have the immunogenic potential to instruct dendritic cells to cross-present endogenously expressed, nonmutated, and tumor antigenic peptides shared among tumors of the melanocytic lineage for T cell recognition. (PMID:12421917)
- Hsc70 may be involved in androgen action on dermal papilla cells. (PMID:12850307)
- no abnormal levels of hsc70 and hsp60 were detectable in pediatric c-ALL pre B-cells at diagnosis nor at relapse. In contrast, developmentally regulated levels of hsc70 and hsp60 expression during B-cell ontogenesis were observed (PMID:12890148)
- tau binds to Hsc70, and its phosphorylation is a recognition requirement for the addition of ubiquitin (PMID:14612456)
- a novel nuclear export and nuclear localization-related signals in human Hsp70 (PMID:14684748)
- a region of the TfR that can potentially interact with hsc70 (PMID:15086793)
- sequestered in discrete foci in the nucleus of the infected cell in herpes simplex virus type 1 infection. (PMID:15194794)
- Hsp105alpha is suggested to regulate the substrate binding cycle of Hsp70/Hsc70 by inhibiting the ATPase activity of Hsp70/Hsc70, thereby functioning as a negative regulator of the Hsp70/Hsc70 chaperone system. (PMID:15292236)
- Expressed in colon cancer cells [NIP71] (PMID:15336565)
- The head shock protein 70 kD (HSP-70i) has been shown to protect cells, tissues, and organs from harmful assaults in vivo and in vitro experimental models. (PMID:15625011)
- In this study, we discovered that the U-box ubiquitin ligase carboxyl-terminus of Hsc70 interacting protein (CHIP) ubiquitylated Epsin. (PMID:15694383)
- Present in cells as part of the dengue virus receptor. (PMID:15795242)
- CSP modulates G protein function by preferentially targeting the inactive GDP-bound form of G alpha(s) and promoting GDP/GTP exchange; the guanine nucleotide exchange activity of full-length CSP is regulated by Hsc70-SGT (PMID:15972823)
- This study identified heat shock protein 70 protein 8 as being expressed on the cell surface and downregulated upon differentiation. (PMID:16100000)
- Histidine 89 is an essential residue for Hsp70 in the phosphate transfer reaction. (PMID:16817320)
- Hsc70 is directly associated with Influenza virus matrix protein 1 and therefore is required for viral production (PMID:17022977)
- Our results suggest that the widespread accumulation of Hsc70 and Hsp70 may occur in brains with MSA, and that Hsc70 and Hsp70 may be associated with the pathogenesis of MSA. (PMID:17240362)
- Hsc70 plays a defined role in reovirus outer capsid disassembly, during or soon after membrane penetration, to prepare the entering particle for gene expression and replication (PMID:17284448)
- serum Hsp70 concentrations are decreased in normal human pregnancy (PMID:17296233)
- Following co-immunoprecipitation, a specific interaction between the head domain of K5 with Hsc70, a chaperone also involved in vesicle uncoating, was verified. (PMID:17397964)
- FKBP38 is a co-chaperone of HERG and contributes via the Hsc70/Hsp90 chaperone system to the trafficking of wild type and mutant HERG potassium channels (PMID:17569659)
- 70-kDa heat shock proteins as a AQP2 interactors and have shown for hsc70 that this interaction is involved in AQP2 trafficking. (PMID:17636261)
- Important functions of recently activated dendritic cells are thus critically modulated by the newly discovered HSPA8-EWI-2 interaction. (PMID:17785435)
- Amino acid domains 280-297 of VP6 and 531-554 of VP4 are implicated in heat shock cognate protein hsc70-mediated rotavirus infection. (PMID:17876681)
- an association between Hsc70 and ASIC2 that may underlie the increased retention of ASIC2 in the endoplasmic reticulum of glioma cells. (PMID:17878160)
- HSP70 was a useful indicator of stressed neurons in acute phase of epilepsy, but not associated with neuronal death (PMID:17929041)
- Our data show that a mutation in hsp70-Hom gene is associated with higher incidence of Postoperative atrial fibrillation. (PMID:17934269)
- BAG-1 associates with Tau protein in an Hsc70-dependent manner. (PMID:17954934)
- propose that one function of the Hsc70 nuclear foci may be to serve to facilitate the process of clearing stalled RNAP II complexes from viral genomes during times of highly active transcription (PMID:18231578)
- Association between endogenous LAP2alpha and Hsp70 in non-transfected cells was confirmed by co-immunoprecipitation. (PMID:18261988)
- Our results raise the possibility that HSP70 gene (i.e., haplotypes of rs2075799) might be implicated in the development of schizophrenia. (PMID:18299791)
- Cathepsin C propeptide interacts with intestinal alkaline phosphatase (IAP) and heat shock cognate protein 70. The propeptide of cathepsin C may stimulate the sorting to the lysosome contributing to the degradation of IAP in Caco-2 cells. (PMID:18307834)
- It was indicated that disruption of the HSC73-TAP association resulted in inhibition of TAP-dependent translocation of HSC73-bound peptides. (PMID:18380807)
- During the earliest stages of HSV-1 infection, the formation of Hsc70 foci adjacent to viral prereplicative sites occurs after PML bodies have been disrupted by ICP0. PML protein is not required for the formation of Hsc70 foci. (PMID:18434395)
- hsc70 binds tau at two sites that are involved in tau aggregation, one of which is regulated by alternative splicing; hsc70 binding might directly inhibit tau-tau interactions that precede tau oligomerization and aggregation. (PMID:18500754)
- The variant allele of THBS2 is a risk factor for TAA in hypertensive patients, whereas the variant alleles of HSPA8, GPX1, AGT, and TNF are protective against this condition (PMID:18600213)
- the hydrophobicity of the TA region dictates whether a precursor is delivered to the ER via the Hsp40/Hsc70 or Asna-1/TRC40-dependent route. (PMID:18667436)
- Bag1 NEF increased refolding by Hsc70 and DJA2, as did the newly characterized NEF Hsp110 (PMID:18684711)
- Simultaneously reducing the expression of both HSC70 and HSP72 induces proteasome-dependent degradation of HSP90 client proteins, G1 cell-cycle arrest, and extensive tumor-specific apoptosis in human tumor cell lines. (PMID:18772114)
- Cytosolic chaperone Hsc70 is required for the cytosolic reactivation of ricin A chain dislocated from the mammalian cell endoplasmic reticulum. (PMID:18988734)
Cross-species orthologs
13 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | hspa8b | ENSDARG00000037403 |
| danio_rerio | hspa8 | ENSDARG00000068992 |
| mus_musculus | Hspa8 | ENSMUSG00000015656 |
| rattus_norvegicus | Hspa8-ps23 | ENSRNOG00000030228 |
| rattus_norvegicus | AABR07048992.1 | ENSRNOG00000032585 |
| rattus_norvegicus | Hspa8 | ENSRNOG00000034066 |
| rattus_norvegicus | Hsc70-ps1 | ENSRNOG00000034093 |
| rattus_norvegicus | ENSRNOG00000062985 | |
| drosophila_melanogaster | Hsp110 | FBGN0026418 |
| caenorhabditis_elegans | hsp-70 | WBGENE00002026 |
| caenorhabditis_elegans | WBGENE00009691 | |
| caenorhabditis_elegans | WBGENE00009692 | |
| caenorhabditis_elegans | WBGENE00016250 |
Paralogs (13): HSPA5 (ENSG00000044574), HSPA9 (ENSG00000113013), HSPH1 (ENSG00000120694), HSPA2 (ENSG00000126803), HYOU1 (ENSG00000149428), HSPA13 (ENSG00000155304), HSPA4L (ENSG00000164070), HSPA4 (ENSG00000170606), HSPA6 (ENSG00000173110), HSPA14 (ENSG00000187522), HSPA1B (ENSG00000204388), HSPA1A (ENSG00000204389), HSPA1L (ENSG00000204390)
Protein
Protein identifiers
Heat shock cognate 71 kDa protein — P11142 (reviewed: P11142)
Alternative names: Heat shock 70 kDa protein 8, Heat shock protein family A member 8, Lipopolysaccharide-associated protein 1
All UniProt accessions (15): P11142, A8K7Q2, E9PI65, E9PK54, E9PKE3, E9PLF4, E9PM13, E9PN25, E9PN89, E9PNE6, E9PPY6, E9PQK7, E9PQQ4, E9PS65, V9HW22
UniProt curated annotations — full annotation on UniProt →
Function. Molecular chaperone implicated in a wide variety of cellular processes, including protection of the proteome from stress, folding and transport of newly synthesized polypeptides, chaperone-mediated autophagy, activation of proteolysis of misfolded proteins, formation and dissociation of protein complexes, and antigen presentation. Plays a pivotal role in the protein quality control system, ensuring the correct folding of proteins, the re-folding of misfolded proteins and controlling the targeting of proteins for subsequent degradation. This is achieved through cycles of ATP binding, ATP hydrolysis and ADP release, mediated by co-chaperones. The co-chaperones have been shown to not only regulate different steps of the ATPase cycle of HSP70, but they also have an individual specificity such that one co-chaperone may promote folding of a substrate while another may promote degradation. The affinity of HSP70 for polypeptides is regulated by its nucleotide bound state. In the ATP-bound form, it has a low affinity for substrate proteins. However, upon hydrolysis of the ATP to ADP, it undergoes a conformational change that increases its affinity for substrate proteins. HSP70 goes through repeated cycles of ATP hydrolysis and nucleotide exchange, which permits cycles of substrate binding and release. The HSP70-associated co-chaperones are of three types: J-domain co-chaperones HSP40s (stimulate ATPase hydrolysis by HSP70), the nucleotide exchange factors (NEF) such as BAG1/2/3 (facilitate conversion of HSP70 from the ADP-bound to the ATP-bound state thereby promoting substrate release), and the TPR domain chaperones such as HOPX and STUB1. Plays a critical role in mitochondrial import, delivers preproteins to the mitochondrial import receptor TOMM70. Acts as a repressor of transcriptional activation. Inhibits the transcriptional coactivator activity of CITED1 on Smad-mediated transcription. Component of the PRP19-CDC5L complex that forms an integral part of the spliceosome and is required for activating pre-mRNA splicing. May have a scaffolding role in the spliceosome assembly as it contacts all other components of the core complex. Binds bacterial lipopolysaccharide (LPS) and mediates LPS-induced inflammatory response, including TNF secretion by monocytes. Substrate recognition component in chaperone-mediated autophagy (CMA), a selective protein degradation process that mediates degradation of proteins with a -KFERQ motif: HSPA8/HSC70 specifically recognizes and binds cytosolic proteins bearing a -KFERQ motif and promotes their recruitment to the surface of the lysosome where they bind to lysosomal protein LAMP2. KFERQ motif-containing proteins are eventually transported into the lysosomal lumen where they are degraded. In conjunction with LAMP2, facilitates MHC class II presentation of cytoplasmic antigens by guiding antigens to the lysosomal membrane for interaction with LAMP2 which then elicits MHC class II presentation of peptides to the cell membrane. Participates in the ER-associated degradation (ERAD) quality control pathway in conjunction with J domain-containing co-chaperones and the E3 ligase STUB1. It is recruited to clathrin-coated vesicles through its interaction with DNAJC6 leading to activation of HSPA8/HSC70 ATPase activity and therefore uncoating of clathrin-coated vesicles.
Subunit / interactions. Component of the chaperone-assisted selective autophagy (CASA) complex consisting of BAG3, HSPA8/HSC70, HSPB8 and STUB1/CHIP. Identified in a IGF2BP1-dependent mRNP granule complex containing untranslated mRNAs. Interacts with PACRG. Interacts with HSPH1/HSP105. Interacts with IRAK1BP1 and BAG1. Interacts with DNAJC7. Interacts with DNAJB12 (via J domain). Interacts with DNAJB14 (via J domain). Interacts (via C-terminus) with the E3 ligase CHIP forming a 210 kDa complex of one CHIP and two HSPA8 molecules. Interacts with CITED1 (via N-terminus); the interaction suppresses the association of CITED1 to p300/CBP and Smad-mediated transcription transactivation. Component of the PRP19-CDC5L splicing complex composed of a core complex comprising a homotetramer of PRPF19, CDC5L, PLRG1 and BCAS2, and at least three less stably associated proteins CTNNBL1, CWC15 and HSPA8. Interacts with TRIM5. Part of a complex composed at least of ASH2L, EMSY, HCFC1, HSPA8, CCAR2, MATR3, MKI67, RBBP5, TUBB2A, WDR5 and ZNF335; this complex may have a histone H3-specific methyltransferase activity. Interacts with METTL21A. Following LPS binding, may form a complex with CXCR4, GDF5 and HSP90AA1. Interacts with PRKN. Interacts with FOXP3. Interacts with DNAJC9 (via J domain). Interacts with MLLT11. Interacts with RNF207. Interacts with DNAJC21. Interacts with DNAJB2. Interacts with TTC1 (via TPR repeats). Interacts with SGTA (via TPR repeats). Interacts with HSF1 (via transactivation domain). Interacts with HOPX, HSP40 and HSP90. Component of the chaperone-assisted selective autophagy (CASA) complex consisting of BAG3, HSPA8/HSC70, HSPB8 and STUB1/CHIP. Interacts with STUB1. Interacts with BAG2. Interacts with BAG3. Interacts with DNAJC12. Interacts with ZMYND10. Interacts with HSPC138. Interacts with BCL2L1, GIMAP5 and MCL1; the interaction with BCL2L1 or MCL1 is impaired in the absence of GIMAP5. Interacts with NLPR12. Interacts with TTC4. Interacts with TOMM70; the interaction is required for preprotein mitochondrial import. May interact with DNJC9; the interaction seems to be histone-dependent. Interacts with BAG5 and JPH2; the interaction with JPH2 is increased in the presence of BAG5. Interacts with VGF-derived peptide TLQP-21. Interacts with molecular chaperone MIPEP155 (via N-terminal ATP-binding region); the interaction results in reduced ATPase activity of HSPA8, impaired interaction of HSPA8 with HSP90 and reduced lysosomal antigen trafficking. Interacts with CDKN1B; the interaction may be associated with susceptibility to ubiquitination. Interacts with HTN3 peptide Hst3; the interaction enhances HSPA8-CDKN1B complex formation. Interacts with DNAJC6 (via J domain) in an ATP-dependent manner; this interaction stimulates the HSPA8’s ATPase activity. Forms a complex composed of HSPA8, CLTC and DNAJC6. Interacts with HSPA8; this interaction modulates migratory and antigen-presenting capacities of dendritic cells. (Microbial infection) Interacts with SV40 VP1. (Microbial infection) Interacts with human herpes virus 1 (HHV-1) transcriptional regulator ICP22; this interaction recruits HSPA8/HSP40 to discrete nuclear foci.
Subcellular location. Cytoplasm. Melanosome. Nucleus. Nucleolus. Cell membrane. Lysosome membrane.
Tissue specificity. Ubiquitous.
Post-translational modifications. Acetylated. ISGylated. Trimethylation at Lys-561 reduces fibrillar SNCA binding.
Domain organisation. The N-terminal nucleotide binding domain (NBD) (also known as the ATPase domain) is responsible for binding and hydrolyzing ATP. The C-terminal substrate-binding domain (SBD) (also known as peptide-binding domain) binds to the client/substrate proteins. The two domains are allosterically coupled so that, when ATP is bound to the NBD, the SBD binds relatively weakly to clients. When ADP is bound in the NBD, a conformational change enhances the affinity of the SBD for client proteins.
Induction. Constitutively synthesized.
Similarity. Belongs to the heat shock protein 70 family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P11142-1 | 1 | yes |
| P11142-2 | 2, HSC54 |
RefSeq proteins (2): NP_006588, NP_694881 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR013126 | Hsp_70_fam | Family |
| IPR018181 | Heat_shock_70_CS | Conserved_site |
| IPR029047 | HSP70_peptide-bd_sf | Homologous_superfamily |
| IPR029048 | HSP70_C_sf | Homologous_superfamily |
| IPR043129 | ATPase_NBD | Homologous_superfamily |
Pfam: PF00012
Enzyme classification (BRENDA):
- EC 7.4.2.3 — mitochondrial protein-transporting ATPase (BRENDA: 11 organisms, 48 substrates, 2 inhibitors, 0 Km, 1 kcat entries)
Substrate kinetics (BRENDA)
1 substrates with measured Km, best-characterized 1. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| ATP | — | 0 |
Catalyzed reactions (Rhea), 1 shown:
- ATP + H2O = ADP + phosphate + H(+) (RHEA:13065)
UniProt features (91 total): helix 22, strand 21, modified residue 19, binding site 12, region of interest 4, turn 4, cross-link 2, sequence variant 2, initiator methionine 1, chain 1, splice variant 1, mutagenesis site 1, compositionally biased region 1
Structure
Experimental structures (PDB)
38 structures, top 30 by resolution.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 5AQM | X-RAY DIFFRACTION | 1.63 |
| 4H5R | X-RAY DIFFRACTION | 1.64 |
| 5AQL | X-RAY DIFFRACTION | 1.69 |
| 4H5V | X-RAY DIFFRACTION | 1.75 |
| 5AQV | X-RAY DIFFRACTION | 1.75 |
| 6B1N | X-RAY DIFFRACTION | 1.8 |
| 3AGY | X-RAY DIFFRACTION | 1.85 |
| 6ZYJ | X-RAY DIFFRACTION | 1.85 |
| 4H5N | X-RAY DIFFRACTION | 1.86 |
| 5AQF | X-RAY DIFFRACTION | 1.88 |
| 3LDQ | X-RAY DIFFRACTION | 1.9 |
| 4H5T | X-RAY DIFFRACTION | 1.9 |
| 5AQT | X-RAY DIFFRACTION | 1.9 |
| 6B1M | X-RAY DIFFRACTION | 1.9 |
| 5AQR | X-RAY DIFFRACTION | 1.91 |
| 5AQU | X-RAY DIFFRACTION | 1.92 |
| 4H5W | X-RAY DIFFRACTION | 1.94 |
| 5AQJ | X-RAY DIFFRACTION | 1.96 |
| 5AQI | X-RAY DIFFRACTION | 1.98 |
| 3FZH | X-RAY DIFFRACTION | 2 |
| 5AQH | X-RAY DIFFRACTION | 2 |
| 5AQS | X-RAY DIFFRACTION | 2 |
| 3ESK | X-RAY DIFFRACTION | 2.05 |
| 5AQP | X-RAY DIFFRACTION | 2.08 |
| 5AQK | X-RAY DIFFRACTION | 2.09 |
| 3FZK | X-RAY DIFFRACTION | 2.1 |
| 3M3Z | X-RAY DIFFRACTION | 2.1 |
| 5AQO | X-RAY DIFFRACTION | 2.12 |
| 3FZF | X-RAY DIFFRACTION | 2.2 |
| 3FZL | X-RAY DIFFRACTION | 2.2 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P11142-F1 | 89.01 | 0.65 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (12): 71; 202–204; 202; 268–275; 268; 271; 275; 339–342; 339; 12–15; 14; 15
Post-translational modifications (21): 2, 108, 153, 246, 319, 319, 328, 329, 362, 469, 512, 512, 524, 541, 561, 561, 589, 597, 601, 512 …
Mutagenesis-validated functional residues (1):
| Position | Phenotype |
|---|---|
| 561 | complete loss of in vitro methylation by mettl21a. |
Function
Pathways and Gene Ontology
Reactome pathways
21 pathways
| ID | Pathway |
|---|---|
| R-HSA-3371453 | Regulation of HSF1-mediated heat shock response |
| R-HSA-3371497 | HSP90 chaperone cycle for steroid hormone receptors (SHR) in the presence of ligand |
| R-HSA-3371568 | Attenuation phase |
| R-HSA-3371571 | HSF1-dependent transactivation |
| R-HSA-432720 | Lysosome Vesicle Biogenesis |
| R-HSA-432722 | Golgi Associated Vesicle Biogenesis |
| R-HSA-447041 | CHL1 interactions |
| R-HSA-450408 | AUF1 (hnRNP D0) binds and destabilizes mRNA |
| R-HSA-6785807 | Interleukin-4 and Interleukin-13 signaling |
| R-HSA-6798695 | Neutrophil degranulation |
| R-HSA-72163 | mRNA Splicing - Major Pathway |
| R-HSA-8856828 | Clathrin-mediated endocytosis |
| R-HSA-8876725 | Protein methylation |
| R-HSA-888590 | GABA synthesis, release, reuptake and degradation |
| R-HSA-9613354 | Lipophagy |
| R-HSA-9613829 | Chaperone Mediated Autophagy |
| R-HSA-9615710 | Late endosomal microautophagy |
| R-HSA-9828642 | Respiratory syncytial virus genome transcription |
| R-HSA-9833482 | PKR-mediated signaling |
| R-HSA-9918481 | Dengue Virus-Host Interactions |
| R-HSA-9918487 | Dengue Virus Genome Translation and Replication |
MSigDB gene sets: 560 (showing top):
GOBP_NEGATIVE_REGULATION_OF_PROTEIN_CONTAINING_COMPLEX_ASSEMBLY, BORCZUK_MALIGNANT_MESOTHELIOMA_UP, REACTOME_INNATE_IMMUNE_SYSTEM, GOBP_LYSOSOMAL_TRANSPORT, GOBP_INTRACELLULAR_PROTEIN_TRANSPORT, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, GOBP_INFLAMMATORY_RESPONSE, GOBP_CELLULAR_RESPONSE_TO_LIPID, GOCC_VACUOLAR_MEMBRANE, GOCC_SECRETORY_GRANULE, MODULE_151, KEGG_MAPK_SIGNALING_PATHWAY, GRAESSMANN_APOPTOSIS_BY_SERUM_DEPRIVATION_UP, CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_DN, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN
GO Biological Process (47): mRNA splicing, via spliceosome (GO:0000398), protein folding (GO:0006457), response to unfolded protein (GO:0006986), cellular response to starvation (GO:0009267), positive regulation of cell migration (GO:0030335), regulation of protein stability (GO:0031647), protein refolding (GO:0042026), regulation of protein-containing complex assembly (GO:0043254), negative regulation of DNA-templated transcription (GO:0045892), ATP metabolic process (GO:0046034), membrane organization (GO:0061024), regulation of protein complex stability (GO:0061635), chaperone-mediated autophagy (GO:0061684), protein targeting to lysosome involved in chaperone-mediated autophagy (GO:0061740), cellular response to steroid hormone stimulus (GO:0071383), clathrin coat disassembly (GO:0072318), positive regulation of ferroptosis (GO:0160020), negative regulation of NLRP3 inflammasome complex assembly (GO:1900226), negative regulation of supramolecular fiber organization (GO:1902904), regulation of protein import (GO:1904589), chaperone-mediated autophagy translocation complex disassembly (GO:1904764), mRNA processing (GO:0006397), mRNA catabolic process (GO:0006402), autophagy (GO:0006914), response to stress (GO:0006950), signal transduction (GO:0007165), negative regulation of cell population proliferation (GO:0008285), RNA splicing (GO:0008380), negative regulation of signal transduction (GO:0009968), protein catabolic process (GO:0030163), negative regulation of cell growth (GO:0030308), negative regulation of protein ubiquitination (GO:0031397), positive regulation of interleukin-8 production (GO:0032757), cellular response to stress (GO:0033554), cellular response to oxidative stress (GO:0034599), regulation of cytoplasmic pattern recognition receptor signaling pathway (GO:0039531), positive regulation of erythrocyte differentiation (GO:0045648), protein stabilization (GO:0050821), negative regulation of cellular component organization (GO:0051129), cellular heat acclimation (GO:0070370)
GO Molecular Function (21): G protein-coupled receptor binding (GO:0001664), RNA binding (GO:0003723), ATP binding (GO:0005524), ATP hydrolysis activity (GO:0016887), enzyme binding (GO:0019899), MHC class II protein complex binding (GO:0023026), protein-macromolecule adaptor activity (GO:0030674), heat shock protein binding (GO:0031072), ubiquitin protein ligase binding (GO:0031625), protein folding chaperone (GO:0044183), cadherin binding (GO:0045296), receptor ligand activity (GO:0048018), obsolete unfolded protein binding (GO:0051082), protein-folding chaperone binding (GO:0051087), C3HC4-type RING finger domain binding (GO:0055131), ATP-dependent protein disaggregase activity (GO:0140545), ATP-dependent protein folding chaperone (GO:0140662), nucleotide binding (GO:0000166), protein binding (GO:0005515), hydrolase activity (GO:0016787), histone deacetylase binding (GO:0042826)
GO Cellular Component (30): Prp19 complex (GO:0000974), extracellular region (GO:0005576), obsolete extracellular space (GO:0005615), nucleus (GO:0005634), nucleoplasm (GO:0005654), spliceosomal complex (GO:0005681), nucleolus (GO:0005730), cytoplasm (GO:0005737), lysosomal membrane (GO:0005765), cytosol (GO:0005829), plasma membrane (GO:0005886), focal adhesion (GO:0005925), membrane (GO:0016020), secretory granule lumen (GO:0034774), melanosome (GO:0042470), lysosomal lumen (GO:0043202), clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane (GO:0061202), extracellular exosome (GO:0070062), blood microparticle (GO:0072562), lumenal side of lysosomal membrane (GO:0098575), protein folding chaperone complex (GO:0101031), ficolin-1-rich granule lumen (GO:1904813), ribonucleoprotein complex (GO:1990904), lysosome (GO:0005764), centrosome (GO:0005813), centriole (GO:0005814), endomembrane system (GO:0012505), aggresome (GO:0016235), nuclear speck (GO:0016607), perinuclear region of cytoplasm (GO:0048471)
Reactome top-level categories
Rollup of top-17 pathways:
| Category | Pathways |
|---|---|
| Cellular response to heat stress | 2 |
| trans-Golgi Network Vesicle Budding | 2 |
| Autophagy | 2 |
| Cellular responses to stress | 1 |
| HSF1-dependent transactivation | 1 |
| L1CAM interactions | 1 |
| Regulation of mRNA stability by proteins that bind AU-rich elements | 1 |
| Signaling by Interleukins | 1 |
| Innate Immune System | 1 |
| mRNA Splicing | 1 |
| Membrane Trafficking | 1 |
| Post-translational protein modification | 1 |
| Neurotransmitter release cycle | 1 |
| Selective autophagy | 1 |
| Respiratory syncytial virus (RSV) genome replication, transcription and translation | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 6 |
| protein binding | 5 |
| signaling receptor binding | 4 |
| ATP-dependent activity | 3 |
| regulation of biological quality | 2 |
| protein folding | 2 |
| protein-folding chaperone binding | 2 |
| nuclear lumen | 2 |
| lysosome | 2 |
| RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | 1 |
| mRNA processing | 1 |
| cellular process | 1 |
| protein maturation | 1 |
| response to topologically incorrect protein | 1 |
| cellular response to nutrient levels | 1 |
| cellular response to stress | 1 |
| response to starvation | 1 |
| cell migration | 1 |
| regulation of cell migration | 1 |
| positive regulation of cell motility | 1 |
| regulation of cellular component biogenesis | 1 |
| regulation of cellular component organization | 1 |
| protein-containing complex assembly | 1 |
| DNA-templated transcription | 1 |
| regulation of DNA-templated transcription | 1 |
| negative regulation of RNA biosynthetic process | 1 |
| purine ribonucleotide metabolic process | 1 |
| purine ribonucleoside triphosphate metabolic process | 1 |
| cellular component organization | 1 |
| autophagy | 1 |
| protein catabolic process | 1 |
| protein carrier activity | 1 |
| protein targeting to lysosome | 1 |
| chaperone-mediated autophagy | 1 |
| protein targeting to vacuole involved in autophagy | 1 |
| cellular response to hormone stimulus | 1 |
| response to steroid hormone | 1 |
| cellular response to lipid | 1 |
| vesicle uncoating | 1 |
| clathrin-dependent endocytosis | 1 |
Protein interactions and networks
STRING
8234 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| HSPA8 | DNAJB1 | P25685 | 999 |
| HSPA8 | HSP90AA1 | P07900 | 999 |
| HSPA8 | HSP90AB1 | P08238 | 999 |
| HSPA8 | STUB1 | Q9UNE7 | 998 |
| HSPA8 | BAG1 | Q99933 | 998 |
| HSPA8 | BAG3 | O95817 | 997 |
| HSPA8 | BAG2 | O95816 | 997 |
| HSPA8 | DNAJC6 | O75061 | 996 |
| HSPA8 | SGTA | O43765 | 994 |
| HSPA8 | ST13 | P50502 | 992 |
| HSPA8 | HSPB8 | Q9UJY1 | 992 |
| HSPA8 | HSPBP1 | Q9NZL4 | 984 |
| HSPA8 | HSPA4 | P34932 | 984 |
| HSPA8 | DNAJC5 | Q9H3Z4 | 984 |
| HSPA8 | SNCA | P37840 | 962 |
IntAct
1146 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| MAP2K1 | RAF1 | psi-mi:“MI:0914”(association) | 0.960 |
| HSPA8 | HSPBP1 | psi-mi:“MI:0915”(physical association) | 0.930 |
| HSPBP1 | HSPA8 | psi-mi:“MI:0915”(physical association) | 0.930 |
| HSPA8 | STUB1 | psi-mi:“MI:0915”(physical association) | 0.870 |
| STUB1 | HSPA8 | psi-mi:“MI:0915”(physical association) | 0.870 |
| HSPA8 | BAG2 | psi-mi:“MI:2364”(proximity) | 0.860 |
| BAG2 | HSPA8 | psi-mi:“MI:0915”(physical association) | 0.860 |
| HSPA8 | HSPA4 | psi-mi:“MI:0915”(physical association) | 0.830 |
| YWHAH | ABLIM1 | psi-mi:“MI:0914”(association) | 0.800 |
| BAG1 | HSPA8 | psi-mi:“MI:0915”(physical association) | 0.790 |
| IFT70B | IFT56 | psi-mi:“MI:0914”(association) | 0.790 |
| GMNN | MCIDAS | psi-mi:“MI:0914”(association) | 0.770 |
| HSPA8 | GAK | psi-mi:“MI:0914”(association) | 0.760 |
| TTC4 | HSP90AB1 | psi-mi:“MI:0914”(association) | 0.750 |
| VSX1 | USP12 | psi-mi:“MI:0914”(association) | 0.730 |
| HSPA8 | TRIM38 | psi-mi:“MI:0915”(physical association) | 0.720 |
| TRIM38 | HSPA8 | psi-mi:“MI:0915”(physical association) | 0.720 |
| HSPA8 | MAPT | psi-mi:“MI:0407”(direct interaction) | 0.670 |
| TRAF3IP1 | HSPA8 | psi-mi:“MI:0915”(physical association) | 0.660 |
BioGRID (3478): HSPA8 (Biochemical Activity), HSPA8 (Affinity Capture-MS), HSPA8 (Two-hybrid), HSPA8 (Affinity Capture-MS), HSPA8 (Reconstituted Complex), STUB1 (Protein-peptide), HSPA8 (Two-hybrid), NMI (Two-hybrid), BAG3 (Two-hybrid), TRIM38 (Two-hybrid), HSPBP1 (Two-hybrid), HSPA8 (Affinity Capture-MS), HSPA8 (Affinity Capture-MS), HSPA8 (Reconstituted Complex), HSPA8 (Two-hybrid)
ESM2 similar proteins: A2Q0Z1, O59855, O65719, O73885, P02827, P08106, P08108, P08418, P09446, P0DMV8, P0DMV9, P0DMW0, P0DMW1, P11142, P11147, P14659, P17156, P19120, P19378, P22953, P27541, P34930, P34933, P36415, P41753, P47773, P53421, P53623, P54652, P63017, P63018, Q01233, Q01877, Q05944, Q06248, Q10265, Q27965, Q27975, Q4U0F3, Q557E0
Diamond homologs: A0A0D1CD96, A0A509AJG0, A2Q0Z1, A5A8V7, F5HB71, G3I8R9, J9VZ70, O24581, O59855, O73885, O93866, P02827, P06761, P07823, P08108, P08418, P09189, P0CB32, P0DMV8, P0DMV9, P10591, P10592, P11021, P11142, P14659, P16474, P17156, P17879, P19120, P19208, P19378, P20029, P20163, P22010, P22202, P24067, P26413, P27420, P29844, P34933
SIGNOR signaling
13 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| GRPEL1 | “down-regulates activity” | HSPA8 | binding |
| DNAJB12 | “up-regulates activity” | HSPA8 | binding |
| HSPA8 | “down-regulates quantity” | CFTR | binding |
| HSPA8 | “up-regulates activity” | RNF5 | binding |
| HSPA8 | “form complex” | PRP19-CDC5L | binding |
| KLF4 | “up-regulates quantity by expression” | HSPA8 | “transcriptional regulation” |
| BAG1 | “up-regulates activity” | HSPA8 | binding |
| BAG3 | “up-regulates activity” | HSPA8 | binding |
| HSPA8 | “up-regulates activity” | “Chaperone-mediated autophagy” | |
| HSPA8 | “down-regulates quantity by destabilization” | “AP-2/clathrin vescicle” | binding |
| DNAJC6 | “up-regulates activity” | HSPA8 | relocalization |
| STUB1 | “down-regulates quantity by destabilization” | HSPA8 | polyubiquitination |
| BAG1 | “down-regulates quantity by destabilization” | HSPA8 | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 229 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Signaling by RAS mutants | 5 | 13.3× | 3e-03 |
| Attenuation phase | 5 | 12.8× | 3e-03 |
| Signaling by high-kinase activity BRAF mutants | 6 | 12.0× | 3e-03 |
| HSF1 activation | 5 | 12.0× | 3e-03 |
| MAP2K and MAPK activation | 6 | 10.8× | 3e-03 |
| Signaling by RAF1 mutants | 6 | 10.5× | 3e-03 |
| HSF1-dependent transactivation | 5 | 10.0× | 7e-03 |
| Signaling by moderate kinase activity BRAF mutants | 6 | 9.6× | 3e-03 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| regulation of protein ubiquitination | 5 | 21.9× | 2e-03 |
| intrinsic apoptotic signaling pathway | 6 | 10.7× | 5e-03 |
| cellular response to heat | 6 | 10.2× | 6e-03 |
| response to unfolded protein | 6 | 8.9× | 8e-03 |
| G1/S transition of mitotic cell cycle | 8 | 8.0× | 3e-03 |
| protein folding | 14 | 7.2× | 2e-05 |
| negative regulation of apoptotic process | 19 | 3.3× | 3e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
53 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 25 |
| Likely benign | 1 |
| Benign | 4 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
834 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 11:123057915:GCAGT:G | acceptor_gain | 1.0000 |
| 11:123057916:CAGT:C | acceptor_gain | 1.0000 |
| 11:123057916:CAGTC:C | acceptor_gain | 1.0000 |
| 11:123057917:AGT:A | acceptor_gain | 1.0000 |
| 11:123057918:GT:G | acceptor_gain | 1.0000 |
| 11:123057919:TCTGA:T | acceptor_loss | 1.0000 |
| 11:123057920:C:CC | acceptor_gain | 1.0000 |
| 11:123057920:CTG:C | acceptor_loss | 1.0000 |
| 11:123058249:AACCT:A | donor_loss | 1.0000 |
| 11:123058250:ACCTG:A | donor_loss | 1.0000 |
| 11:123058251:C:G | donor_loss | 1.0000 |
| 11:123058262:T:C | donor_gain | 1.0000 |
| 11:123058286:CA:C | donor_gain | 1.0000 |
| 11:123058480:ACGGC:A | acceptor_gain | 1.0000 |
| 11:123058481:CGGC:C | acceptor_gain | 1.0000 |
| 11:123058481:CGGCC:C | acceptor_gain | 1.0000 |
| 11:123058482:GGC:G | acceptor_gain | 1.0000 |
| 11:123058483:GC:G | acceptor_gain | 1.0000 |
| 11:123058484:CC:C | acceptor_gain | 1.0000 |
| 11:123058484:CCTA:C | acceptor_loss | 1.0000 |
| 11:123058485:C:CC | acceptor_gain | 1.0000 |
| 11:123058485:CTAGG:C | acceptor_loss | 1.0000 |
| 11:123058486:T:C | acceptor_loss | 1.0000 |
| 11:123058630:AC:A | donor_gain | 1.0000 |
| 11:123058631:CC:C | donor_gain | 1.0000 |
| 11:123058830:CC:C | acceptor_loss | 1.0000 |
| 11:123058830:CCT:C | acceptor_gain | 1.0000 |
| 11:123058831:C:CC | acceptor_gain | 1.0000 |
| 11:123058832:T:C | acceptor_gain | 1.0000 |
| 11:123058832:T:TC | acceptor_gain | 1.0000 |
AlphaMissense
4270 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 11:123057879:A:G | L599P | 1.000 |
| 11:123058265:A:G | L581P | 1.000 |
| 11:123058370:G:T | A546D | 1.000 |
| 11:123058382:A:G | L542P | 1.000 |
| 11:123058422:C:G | D529H | 1.000 |
| 11:123058443:C:G | A522P | 1.000 |
| 11:123058646:A:T | I503N | 1.000 |
| 11:123058685:G:T | A490D | 1.000 |
| 11:123058691:A:T | V488D | 1.000 |
| 11:123058703:C:T | G484D | 1.000 |
| 11:123058704:C:G | G484R | 1.000 |
| 11:123058745:C:T | G470D | 1.000 |
| 11:123058746:C:G | G470R | 1.000 |
| 11:123058772:A:G | L461P | 1.000 |
| 11:123058814:C:G | R447P | 1.000 |
| 11:123058820:C:A | G445V | 1.000 |
| 11:123058820:C:T | G445D | 1.000 |
| 11:123058821:C:G | G445R | 1.000 |
| 11:123059098:G:C | F428L | 1.000 |
| 11:123059098:G:T | F428L | 1.000 |
| 11:123059099:A:G | F428S | 1.000 |
| 11:123059100:A:G | F428L | 1.000 |
| 11:123059120:G:T | P421H | 1.000 |
| 11:123059177:C:A | G402V | 1.000 |
| 11:123059177:C:T | G402D | 1.000 |
| 11:123059178:C:G | G402R | 1.000 |
| 11:123059186:A:G | L399P | 1.000 |
| 11:123059198:T:A | D395V | 1.000 |
| 11:123059199:C:G | D395H | 1.000 |
| 11:123059204:A:G | L393P | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000333769 (11:123059644 C>T), RS1000893027 (11:123062137 A>C,G), RS1000900919 (11:123064291 T>C), RS1001112689 (11:123058554 G>A,C,T), RS1001113413 (11:123061368 T>C), RS1001617610 (11:123062527 G>A,C), RS1002008807 (11:123063274 T>A,C), RS1002068462 (11:123062646 G>A), RS1002888953 (11:123061053 G>A), RS1002909624 (11:123057432 C>T), RS1003257093 (11:123059809 G>A), RS1003446976 (11:123064354 A>G), RS1004903529 (11:123062680 G>A), RS1005343071 (11:123057659 C>A,T), RS1005371957 (11:123062048 TGAGCA>T)
Disease associations
OMIM: gene MIM:600816 | disease phenotypes: MIM:606369
GenCC curated gene-disease
Mondo (1): Lennox-Gastaut syndrome (MONDO:0016532)
Orphanet (1): Lennox-Gastaut syndrome (Orphanet:2382)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
7 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST005992_33 | Mean corpuscular hemoglobin concentration | 5.000000e-23 |
| GCST007979_4 | Postoperative acute renal failure after cardiac surgery | 9.000000e-06 |
| GCST012020_171 | Serum metabolite levels | 2.000000e-11 |
| GCST012021_52 | Serum metabolite levels | 2.000000e-11 |
| GCST90002390_43 | Mean corpuscular hemoglobin | 5.000000e-21 |
| GCST90002391_204 | Mean corpuscular hemoglobin concentration | 1.000000e-16 |
| GCST90002404_129 | Red cell distribution width | 5.000000e-31 |
EFO canonical traits (5, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004528 | mean corpuscular hemoglobin concentration |
| EFO:0009951 | response to surgery |
| EFO:0009955 | post-operative acute kidney injury |
| EFO:0004527 | mean corpuscular hemoglobin |
| EFO:0009188 | Red cell distribution width |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D065768 | Lennox Gastaut Syndrome | C10.228.140.490.493.750; C16.320.495 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1275223 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
4 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 338,203 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL496 | HEXACHLOROPHENE | 4 | 26,164 |
| CHEMBL1232461 | MOLIBRESIB | 2 | 1,538 |
| CHEMBL14249 | ADENOSINE TRIPHOSPHATE | 2 | 287,353 |
| CHEMBL6246 | ELLAGIC ACID | 2 | 23,148 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: other protein — Heat shock proteins
Binding affinities (BindingDB)
19 measured of 40 human assays (53 total across all organisms); most potent 19 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| HEXACHLOROPHENE | IC50 | 98.3 nM |
| (ADP)[5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl trihydrogen diphosphate | IC50 | 280 nM |
| 3-(3,4,5-trihydroxy-6-keto-xanthen-9-yl)propionic acid | IC50 | 578 nM |
| 7-methyl-2-(3,4,5-trihydroxy-6-keto-xanthen-9-yl)bicyclo[2.2.1]hept-5-ene-3-carboxylic acid | IC50 | 634 nM |
| ATP(4-) | IC50 | 3370 nM |
| (4-methoxy-1,3-benzothiazol-2-yl)-[5-(4-methoxyphenyl)-1,3,4-oxadiazol-2-yl]amine | IC50 | 5160 nM |
| MLS000521411 | IC50 | 6900 nM |
| 1-Cyclopropyl-3-(2,3-di-furan-2-yl-quinoxalin-6-yl)-urea | EC50 | 9260 nM |
| 2-(3,4,5-trihydroxy-6-oxo-6H-xanthen-9-yl)cyclohexanecarboxylic acid | IC50 | 9850 nM |
| (5Z)-5-(5-bromo-2-methoxybenzylidene)-2-(2-furyl)[1,3]thiazolo[3,2-b][1,2,4]triazol-6(5H)-one | IC50 | 12800 nM |
| 8-carbethoxy-3a,4,5,9b-tetrahydro-3H-cyclopenta[c]quinoline-4-carboxylic acid | IC50 | 15800 nM |
| (9Z)-9-(3,3-dihydroxyprop-2-enylidene)-5,6-dihydroxy-xanthene-3,4-quinone | IC50 | 15800 nM |
| 3-[(4Z)-4-[(E)-3-(2-furanyl)prop-2-enylidene]-3-methyl-5-oxo-1-pyrazolyl]benzoic acid | IC50 | 17400 nM |
| 6-methyl-8-nitro-3a,4,5,9b-tetrahydro-3H-cyclopenta[c]quinoline-4-carboxylic acid | IC50 | 24300 nM |
| MLS000050353 | EC50 | 33300 nM |
| 6,7-dimethyl-3a,4,5,9b-tetrahydro-3H-cyclopenta[c]quinoline-4-carboxylic acid | IC50 | 40400 nM |
| 6-iodanyl-3a,4,5,9b-tetrahydro-3H-cyclopenta[c]quinoline-4-carboxylic acid | IC50 | 47800 nM |
| 3-(2,5-dimethyl-1-pyrrolyl)benzoic acid | EC50 | 49500 nM |
| 2-[4-[3,9-bis(oxidanylidene)-2-(oxolan-2-ylmethyl)-1H-chromeno[2,3-c]pyrrol-1-yl]phenoxy]ethanamide | IC50 | 50000 nM |
ChEMBL bioactivities
52 potent at pChembl≥5 of 82 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
PubChem BioAssay actives
46 with measured affinity, of 152 total; 30 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 2-[(4S)-6-(4-chlorophenyl)-8-methoxy-1-methyl-4H-[1,2,4]triazolo[4,3-a][1,4]benzodiazepin-4-yl]-N-ethylacetamide | 2179134: Binding affinity against HSPA8 (unknown origin) assessed as apparent dissociation constant incubated for 1 hr by colloidal coomassie staining based LC-MS/MS analysis | kd | 0.0560 | uM |
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2148555: Binding affinity to human HSPA8 incubated for 45 mins by Kinobead based pull down assay | kd | 0.1111 | uM |
| [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl phosphono hydrogen phosphate | 527455: Binding affinity to human Hsc70 by isothermal calorimetry assay | kd | 0.2600 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-[(4-chlorophenyl)methylamino]purin-9-yl]-5-(hydroxymethyl)oxolane-3,4-diol | 1310291: Binding affinity to human truncated HSC70 NBD (1 to 381 residues) by SPR analysis | kd | 0.2800 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-[(4-methylphenyl)methylamino]purin-9-yl]-5-(hydroxymethyl)oxolane-3,4-diol | 1310291: Binding affinity to human truncated HSC70 NBD (1 to 381 residues) by SPR analysis | kd | 0.2951 | uM |
| 5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]-N-[6-[2-[(Z)-[(5E)-5-[5-(1,1-difluoroethyl)-3-methyl-1,3-benzothiazol-2-ylidene]-3-ethyl-4-oxo-1,3-thiazolidin-2-ylidene]methyl]pyridin-1-ium-1-yl]hexyl]pentanamide chloride | 1056234: Binding affinity to human HSC70 after 3 hrs by ELISA | kd | 0.4000 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-[(4-fluorophenyl)methylamino]purin-9-yl]-5-(hydroxymethyl)oxolane-3,4-diol | 1310291: Binding affinity to human truncated HSC70 NBD (1 to 381 residues) by SPR analysis | kd | 0.4571 | uM |
| 177372351 | 2141349: Binding affinity to human recombinant full length HSPA8 (42 to 401 residues) expressed in Escherichia coli BL21 (DE3) cells assessed as dissociation constant | kd | 0.6250 | uM |
| (2Z,5E)-5-(6-bromo-3-methyl-1,3-benzothiazol-2-ylidene)-3-ethyl-2-[[3-[[5-(trifluoromethyl)furan-2-yl]methyl]-1,3-thiazol-3-ium-2-yl]methylidene]-1,3-thiazolidin-4-one chloride | 1505723: Binding affinity to human HSC70 after 2 hrs by fluorescence shift assay | kd | 0.6600 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-(quinolin-6-ylmethylamino)purin-9-yl]-5-(hydroxymethyl)oxolane-3,4-diol | 1310291: Binding affinity to human truncated HSC70 NBD (1 to 381 residues) by SPR analysis | kd | 0.7200 | uM |
| 5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]-N-[6-[2-[(Z)-[(5E)-3-ethyl-5-(5-methoxy-3-methyl-1,3-benzothiazol-2-ylidene)-4-oxo-1,3-thiazolidin-2-ylidene]methyl]pyridin-1-ium-1-yl]hexyl]pentanamide chloride | 1056234: Binding affinity to human HSC70 after 3 hrs by ELISA | kd | 0.9000 | uM |
| 5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]-N-[6-[2-[(Z)-[(5E)-3-ethyl-5-[3-methyl-6-(trifluoromethyl)-1,3-benzothiazol-2-ylidene]-4-oxo-1,3-thiazolidin-2-ylidene]methyl]pyridin-1-ium-1-yl]hexyl]pentanamide chloride | 1056234: Binding affinity to human HSC70 after 3 hrs by ELISA | kd | 1.0000 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-(benzylamino)purin-9-yl]-5-(hydroxymethyl)oxolane-3,4-diol | 1310291: Binding affinity to human truncated HSC70 NBD (1 to 381 residues) by SPR analysis | kd | 1.4000 | uM |
| 5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]-N-[6-[2-[(Z)-[(5E)-3-ethyl-5-(6-fluoro-3-methyl-1,3-benzothiazol-2-ylidene)-4-oxo-1,3-thiazolidin-2-ylidene]methyl]pyridin-1-ium-1-yl]hexyl]pentanamide chloride | 1056234: Binding affinity to human HSC70 after 3 hrs by ELISA | kd | 1.5000 | uM |
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2148555: Binding affinity to human HSPA8 incubated for 45 mins by Kinobead based pull down assay | kd | 1.6133 | uM |
| 5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]-N-[6-[2-[(Z)-[(5E)-5-(6-chloro-3-methyl-1,3-benzothiazol-2-ylidene)-3-ethyl-4-oxo-1,3-thiazolidin-2-ylidene]methyl]pyridin-1-ium-1-yl]hexyl]pentanamide chloride | 1056234: Binding affinity to human HSC70 after 3 hrs by ELISA | kd | 1.7000 | uM |
| 5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]-N-[6-[2-[(Z)-[(5E)-3-ethyl-5-(7-fluoro-3-methyl-1,3-benzothiazol-2-ylidene)-4-oxo-1,3-thiazolidin-2-ylidene]methyl]pyridin-1-ium-1-yl]hexyl]pentanamide chloride | 1056234: Binding affinity to human HSC70 after 3 hrs by ELISA | kd | 1.9000 | uM |
| 5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]-N-[6-[2-[(Z)-[(5E)-3-ethyl-5-(3-methyl-1,3-benzothiazol-2-ylidene)-4-oxo-1,3-thiazolidin-2-ylidene]methyl]pyridin-1-ium-1-yl]hexyl]pentanamide chloride | 1056234: Binding affinity to human HSC70 after 3 hrs by ELISA | kd | 2.0000 | uM |
| 5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]-N-[6-[2-[(Z)-[(5E)-3-ethyl-5-(5-fluoro-3-methyl-1,3-benzothiazol-2-ylidene)-4-oxo-1,3-thiazolidin-2-ylidene]methyl]pyridin-1-ium-1-yl]hexyl]pentanamide chloride | 1056234: Binding affinity to human HSC70 after 3 hrs by ELISA | kd | 2.3000 | uM |
| 5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]-N-[[4-[[2-[(Z)-[(5E)-3-ethyl-5-(4-fluoro-3-methyl-1,3-benzothiazol-2-ylidene)-4-oxo-1,3-thiazolidin-2-ylidene]methyl]-1,3-thiazol-3-ium-3-yl]methyl]phenyl]methyl]pentanamide chloride | 1056234: Binding affinity to human HSC70 after 3 hrs by ELISA | kd | 2.4000 | uM |
| 5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]-N-[6-[2-[(Z)-[(5E)-5-(7-chloro-3-methyl-1,3-benzothiazol-2-ylidene)-3-ethyl-4-oxo-1,3-thiazolidin-2-ylidene]methyl]pyridin-1-ium-1-yl]hexyl]pentanamide chloride | 1056234: Binding affinity to human HSC70 after 3 hrs by ELISA | kd | 2.6000 | uM |
| 4-amino-6-(benzylamino)-7-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrrolo[2,3-d]pyrimidine-5-carbonitrile | 1310291: Binding affinity to human truncated HSC70 NBD (1 to 381 residues) by SPR analysis | kd | 2.7542 | uM |
| 4-amino-7-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrrolo[2,3-d]pyrimidine-5-carboxamide | 1310291: Binding affinity to human truncated HSC70 NBD (1 to 381 residues) by SPR analysis | kd | 3.2359 | uM |
| 4-amino-7-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-6-(methylamino)pyrrolo[2,3-d]pyrimidine-5-carbonitrile | 1310291: Binding affinity to human truncated HSC70 NBD (1 to 381 residues) by SPR analysis | kd | 3.3000 | uM |
| (2R,3R,4S,5R)-2-[6-amino-8-[(3,4-dichlorophenyl)methylamino]purin-9-yl]-5-(hydroxymethyl)oxolane-3,4-diol | 1310291: Binding affinity to human truncated HSC70 NBD (1 to 381 residues) by SPR analysis | kd | 3.5000 | uM |
| 5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]-N-[6-[2-[(Z)-[(5E)-5-(5-chloro-3-methyl-1,3-benzothiazol-2-ylidene)-3-ethyl-4-oxo-1,3-thiazolidin-2-ylidene]methyl]pyridin-1-ium-1-yl]hexyl]pentanamide chloride | 1056234: Binding affinity to human HSC70 after 3 hrs by ELISA | kd | 4.0000 | uM |
| 5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]-N-[6-[2-[(Z)-[(5E)-3-ethyl-5-(6-methoxy-3-methyl-1,3-benzothiazol-2-ylidene)-4-oxo-1,3-thiazolidin-2-ylidene]methyl]pyridin-1-ium-1-yl]hexyl]pentanamide chloride | 1056234: Binding affinity to human HSC70 after 3 hrs by ELISA | kd | 5.4000 | uM |
| (2R,3R,4S,5R)-2-(6,8-diaminopurin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol | 1310291: Binding affinity to human truncated HSC70 NBD (1 to 381 residues) by SPR analysis | kd | 6.9183 | uM |
| 5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]-N-[6-[2-[(Z)-[(5E)-5-(4-chloro-3-methyl-1,3-benzothiazol-2-ylidene)-3-ethyl-4-oxo-1,3-thiazolidin-2-ylidene]methyl]pyridin-1-ium-1-yl]hexyl]pentanamide chloride | 1056234: Binding affinity to human HSC70 after 3 hrs by ELISA | kd | 7.7000 | uM |
| N-[(2S,3R)-1-[(4,5-dimethyl-1,3-thiazol-2-yl)amino]-3-methyl-1-oxopentan-2-yl]-1H-indole-2-carboxamide | 1968964: Inhibition of HspA8 (unknown origin) by FP assay | ic50 | 9.8000 | uM |
CTD chemical–gene interactions
184 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | increases expression, increases secretion, affects expression | 7 |
| bisphenol A | affects expression, decreases expression, increases expression | 6 |
| Tobacco Smoke Pollution | increases metabolic processing, affects expression, decreases expression, increases expression | 6 |
| Particulate Matter | increases reaction, increases abundance, increases expression, affects cotreatment, decreases expression (+1 more) | 6 |
| Cadmium | increases secretion, increases abundance, increases expression | 5 |
| Copper | affects binding, decreases expression, increases expression | 5 |
| Cadmium Chloride | affects expression, increases abundance, increases expression, increases secretion | 5 |
| Cisplatin | affects cotreatment, increases expression, decreases expression, increases secretion | 4 |
| Estradiol | affects expression, increases expression | 4 |
| Vehicle Emissions | increases abundance, increases expression, affects expression, increases reaction | 3 |
| Benzo(a)pyrene | decreases reaction, increases expression, increases reaction, affects reaction | 3 |
| Rotenone | affects expression, decreases expression | 3 |
| arsenite | affects binding, increases reaction, increases oxidation | 2 |
| nickel chloride | decreases expression, increases expression | 2 |
| nickel acetate | increases expression, affects expression | 2 |
| Decitabine | increases expression, affects methylation | 2 |
| Acetaminophen | decreases expression, increases expression | 2 |
| Air Pollutants | affects cotreatment, increases abundance, increases expression | 2 |
| Cannabidiol | affects cotreatment, decreases expression, increases expression | 2 |
| Dinitrochlorobenzene | affects binding, increases metabolic processing | 2 |
| Doxorubicin | affects cotreatment, increases expression | 2 |
| Ibuprofen | affects localization | 2 |
| Indomethacin | affects localization | 2 |
| Ivermectin | affects cotreatment, increases expression, decreases expression | 2 |
| Silver | increases expression | 2 |
| Dronabinol | decreases expression | 2 |
| Valproic Acid | affects cotreatment, increases expression | 2 |
| Cyclosporine | increases expression, increases secretion | 2 |
| Copper Sulfate | affects expression, decreases expression, increases expression | 2 |
| spautin-1 | affects cotreatment, affects localization, increases transport | 1 |
ChEMBL screening assays
44 unique, capped per target: 44 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1176173 | Binding | Binding affinity to HSC70 EEVD domain by mass spectroscopy | Heat shock protein 70 (hsp70) as an emerging drug target. — J Med Chem |
Cellosaurus cell lines
2 cell lines: 2 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B1TZ | Abcam HeLa HSPA8 KO | Cancer cell line | Female |
| CVCL_E0EH | Ubigene HeLa HSPA8 KO | Cancer cell line | Female |
Clinical trials (associated diseases)
55 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT01370486 | PHASE4 | WITHDRAWN | Melatonin Versus Placebo in the Lennox-Gastaut Syndrome: Neurophysiological and Neuropsychological Effects |
| NCT02731300 | PHASE4 | COMPLETED | Transcranial Direct Current Stimulation, Treatment of Childhood Drug-Resistant Lennox-Gastaut Syndrome, A Pilot Study |
| NCT04133480 | PHASE4 | WITHDRAWN | Investigation of Cognitive Outcomes With Cannabidiol Oral Solution |
| NCT05044819 | PHASE4 | ACTIVE_NOT_RECRUITING | Assessment of Potential for Chronic Liver Injury in Participants Treated With Epidiolex (Cannabidiol) Oral Solution |
| NCT06924827 | PHASE4 | NOT_YET_RECRUITING | A Study to Investigate the Transition of Children From ‘Artisanal Cannabidiol (CBD) to Epidiolex |
| NCT00004776 | PHASE3 | COMPLETED | Phase III Randomized, Double-Blind, Placebo-Controlled Study of Oral Topiramate for Lennox-Gastaut Syndrome |
| NCT01146951 | PHASE3 | COMPLETED | A Placebo-Controlled, Double-Blind Comparative Study of E2080 in Lennox-Gastaut Syndrome Patients (Study E2080-J081-304) |
| NCT01151540 | PHASE3 | COMPLETED | A Long Term Extension Study of E2080 in Lennox-Gastaut Patients |
| NCT01160770 | PHASE3 | COMPLETED | Safety and Effectiveness of Open-Label Clobazam in Subjects With Lennox-Gastaut Syndrome |
| NCT01405053 | PHASE3 | COMPLETED | Study of Rufinamide in Pediatric Subjects 1 to Less Than 4 Years of Age With Lennox-Gastaut Syndrome Inadequately Controlled With Other Anti-epileptic Drugs |
| NCT02224560 | PHASE3 | COMPLETED | Efficacy and Safety of GWP42003-P for Seizures Associated With Lennox-Gastaut Syndrome in Children and Adults |
| NCT02224573 | PHASE3 | COMPLETED | An Open Label Extension Study of Cannabidiol (GWP42003-P) in Children and Adults With Dravet or Lennox-Gastaut Syndromes |
| NCT02224690 | PHASE3 | COMPLETED | A Study to Investigate the Efficacy and Safety of Cannabidiol (GWP42003-P; CBD) as Adjunctive Treatment for Seizures Associated With Lennox-Gastaut Syndrome in Children and Adults |
| NCT02318537 | PHASE3 | WITHDRAWN | Cannabidiol Oral Solution as an Adjunctive Therapy for Treatment of Participants With Inadequately Controlled Lennox-Gastaut Syndrome |
| NCT02834793 | PHASE3 | TERMINATED | Study of Perampanel as Adjunctive Treatment for Inadequately Controlled Seizures Associated With Lennox-Gastaut Syndrome |
| NCT03355209 | PHASE3 | COMPLETED | A Study to Investigate the Efficacy and Safety of ZX008 (Fenfluramine Hydrochloride) as an Adjunctive Therapy in Children and Adults With Lennox-Gastaut Syndrome |
| NCT03936777 | PHASE3 | COMPLETED | A Study to Investigate the Long-Term Safety of ZX008 (Fenfluramine Hydrochloride) Oral Solution in Children and Adults With Epileptic Encephalopathy Including Dravet Syndrome and Lennox-Gastaut Syndrome |
| NCT04611438 | PHASE3 | UNKNOWN | Research on Cognitive Effect of Cannabidiol on Dravet Syndrome and Lennox-Gastaut SyndromeGastaut Syndrome |
| NCT04938427 | PHASE3 | COMPLETED | A Study of Soticlestat as an Add-on Therapy in Children, Teenagers, and Adults With Lennox-Gastaut Syndrome |
| NCT05066217 | PHASE3 | RECRUITING | An Efficacy and Safety Study of Clemizole HCl in Patients With Lennox-Gastaut Syndrome |
| NCT05163314 | PHASE3 | TERMINATED | A Study of Soticlestat as an Add-on Therapy in Children and Adults With Dravet Syndrome or Lennox-Gastaut Syndrome |
| NCT05219617 | PHASE3 | RECRUITING | Investigate Efficacy and Safety of Carisbamate as Adjunctive Treatment for Seizures Associated With LGS in Children and Adults |
| NCT06422377 | PHASE3 | TERMINATED | A Study Evaluating Soticlestat in Participants With Dravet Syndrome or Lennox-Gastaut Syndrome Who Have Been Exposed to Fenfluramine |
| NCT02655198 | PHASE2 | UNKNOWN | Add-on Therapy With Low Dose Fenfluramine in Lennox Gastaut Epilepsy |
| NCT03635073 | PHASE2 | TERMINATED | A Study of Soticlestat in Adults and Children With Rare Epilepsies |
| NCT03650452 | PHASE2 | COMPLETED | A Phase 2, Multicenter, Randomized, Double-blind, Placebo-controlled Study to Evaluate the Efficacy, Safety, and Tolerability of TAK-935 (OV935) as an Adjunctive Therapy in Pediatric Participants With Developmental and/or Epileptic Encephalopathies |
| NCT05339126 | PHASE2 | ACTIVE_NOT_RECRUITING | RNS System LGS Feasibility Study |
| NCT05626634 | PHASE2 | COMPLETED | Open-label, Long-term Safety Study of LP352 in Subjects With Developmental and Epileptic Encephalopathy |
| NCT06401538 | PHASE2 | RECRUITING | BMB-101 in Absence Epilepsy and DEE |
| NCT03467113 | PHASE1 | COMPLETED | A Study to Assess the Safety and Tolerability of ZX008 in Children and Young Adults With Dravet Syndrome or Lennox Gastaut Syndrome Currently Taking Cannabidiol |
| NCT03731715 | PHASE1 | COMPLETED | Carisbamate in Adult & Pediatric Subjects With Lennox-Gastaut Syndrome |
| NCT04062981 | PHASE1 | COMPLETED | Carisbamate Safety Study in Adult and Pediatric Subjects With Lennox-Gastaut Syndrome |
| NCT02815540 | PHASE1/PHASE2 | TERMINATED | The Effects of Cannabidiol (CBD) on Electrical and Autonomic Cardiac Function in Children With Severe Epilepsy |
| NCT05364021 | PHASE1/PHASE2 | COMPLETED | Study to Investigate LP352 in Subjects With Developmental and Epileptic Encephalopathies |
| NCT06738732 | PHASE1/PHASE2 | NOT_YET_RECRUITING | CBD Delivery with the A-Synaptic GT4 Transdermal Delivery System in with Dravet Syndrome And/or Lennox-Gastaut Syndrome |
| NCT02632149 | EARLY_PHASE1 | UNKNOWN | Trial to Assess Vagus Nerve Stimulation Therapy in Children With Lennox-Gastaut Syndrome |
| NCT00004729 | Not specified | COMPLETED | Ketogenic Diet for Child Epilepsy and Seizure Control |
| NCT00552045 | Not specified | COMPLETED | Epilepsy Phenome/Genome Project |
| NCT01991041 | Not specified | COMPLETED | European Registry of Anti-Epileptic Drug Use in Patients With Lennox-Gastaut Syndrome (LGS) |
| NCT02175173 | Not specified | COMPLETED | Post-marketing Surveillance of Long-term Administration of Inovelon Tablets in Patients With Lennox-Gastaut Syndrome |
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): Lennox-Gastaut syndrome