HTR2C
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Also known as 5-HT2C5HTR2C
Summary
HTR2C (5-hydroxytryptamine receptor 2C, HGNC:5295) is a protein-coding gene on chromosome Xq23, encoding 5-hydroxytryptamine receptor 2C (P28335). G-protein coupled receptor for 5-hydroxytryptamine (serotonin).
This gene encodes a seven-transmembrane G-protein-coupled receptor. The encoded protein responds to signaling through the neurotransmitter serotonin. The mRNA of this gene is subject to multiple RNA editing events, where adenosine residues encoded by the genome are converted to inosines. RNA editing is predicted to alter the structure of the second intracellular loop, thereby generating alternate protein forms with decreased ability to interact with G proteins. Abnormalities in RNA editing of this gene have been detected in victims of suicide that suffer from depression. In addition, naturally-occuring variation in the promoter and 5’ non-coding and coding regions of this gene may show statistically-significant association with mental illness and behavioral disorders. Alternative splicing results in multiple different transcript variants.
Source: NCBI Gene 3358 — RefSeq curated summary.
At a glance
- Gene–disease (curated): obesity disorder (Strong, GenCC)
- Clinical variants (ClinVar): 147 total
- Druggable target: yes — 276 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_000868
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:5295 |
| Approved symbol | HTR2C |
| Name | 5-hydroxytryptamine receptor 2C |
| Location | Xq23 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | 5-HT2C, 5HTR2C |
| Ensembl gene | ENSG00000147246 |
| Ensembl biotype | protein_coding |
| OMIM | 312861 |
| Entrez | 3358 |
Gene structure
Transcript identifiers
Ensembl transcripts: 4 — 4 protein_coding
ENST00000276198, ENST00000371950, ENST00000371951, ENST00000894573
RefSeq mRNA: 3 — MANE Select: NM_000868
NM_000868, NM_001256760, NM_001256761
CCDS: CCDS14564, CCDS59174
Canonical transcript exons
ENST00000276198 — 6 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000979310 | 114731294 | 114731607 |
| ENSE00001095186 | 114848003 | 114848203 |
| ENSE00001307811 | 114613815 | 114613881 |
| ENSE00001319431 | 114726858 | 114726971 |
| ENSE00003617968 | 114906589 | 114910061 |
| ENSE00003844018 | 114584086 | 114584659 |
Expression profiles
Bgee: expression breadth broad, 79 present calls, max score 99.77.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.8535 / max 140.2218, expressed in 151 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 197318 | 0.8078 | 150 |
| 209788 | 0.0457 | 23 |
Top tissues by expression
275 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| choroid plexus epithelium | UBERON:0003911 | 99.77 | gold quality |
| lateral globus pallidus | UBERON:0002476 | 88.92 | gold quality |
| superior vestibular nucleus | UBERON:0007227 | 88.82 | gold quality |
| nucleus accumbens | UBERON:0001882 | 88.46 | gold quality |
| caudate nucleus | UBERON:0001873 | 82.47 | gold quality |
| middle frontal gyrus | UBERON:0002702 | 81.69 | gold quality |
| hypothalamus | UBERON:0001898 | 81.27 | gold quality |
| putamen | UBERON:0001874 | 80.59 | gold quality |
| CA1 field of hippocampus | UBERON:0003881 | 78.46 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 77.83 | gold quality |
| endothelial cell | CL:0000115 | 76.73 | silver quality |
| substantia nigra pars compacta | UBERON:0001965 | 75.07 | gold quality |
| medulla oblongata | UBERON:0001896 | 72.95 | gold quality |
| dorsal motor nucleus of vagus nerve | UBERON:0002870 | 72.06 | gold quality |
| entorhinal cortex | UBERON:0002728 | 71.21 | gold quality |
| inferior olivary complex | UBERON:0002127 | 68.77 | gold quality |
| Ammon’s horn | UBERON:0001954 | 68.72 | gold quality |
| temporal lobe | UBERON:0001871 | 68.16 | gold quality |
| amygdala | UBERON:0001876 | 67.88 | gold quality |
| telencephalon | UBERON:0001893 | 67.25 | gold quality |
| substantia nigra | UBERON:0002038 | 65.85 | gold quality |
| prefrontal cortex | UBERON:0000451 | 65.46 | gold quality |
| forebrain | UBERON:0001890 | 65.18 | gold quality |
| midbrain | UBERON:0001891 | 65.00 | gold quality |
| ventral tegmental area | UBERON:0002691 | 64.90 | gold quality |
| cerebellar vermis | UBERON:0004720 | 64.77 | gold quality |
| Brodmann (1909) area 46 | UBERON:0006483 | 63.79 | silver quality |
| orbitofrontal cortex | UBERON:0004167 | 63.63 | silver quality |
| cingulate cortex | UBERON:0003027 | 62.81 | gold quality |
| substantia nigra pars reticulata | UBERON:0001966 | 62.69 | gold quality |
Single-cell (SCXA)
Detected in 5 experiment(s), a significant marker in 5.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-30 | yes | 1624.59 |
| E-HCAD-35 | yes | 1504.53 |
| E-HCAD-5 | yes | 571.27 |
| E-HCAD-25 | yes | 9.92 |
| E-ANND-3 | yes | 3.26 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): MBD1, RUNX1, SPI1, TBXT, ZNF699
miRNA regulators (miRDB)
204 targeting HTR2C, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4476 | 100.00 | 68.18 | 2030 |
| HSA-MIR-6876-5P | 100.00 | 67.68 | 2126 |
| HSA-MIR-4533 | 100.00 | 69.48 | 2758 |
| HSA-MIR-1252-5P | 100.00 | 69.80 | 2774 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-4668-3P | 100.00 | 68.74 | 2635 |
| HSA-MIR-6758-5P | 100.00 | 66.21 | 1470 |
| HSA-MIR-5692B | 100.00 | 71.32 | 2622 |
| HSA-MIR-5692C | 100.00 | 71.32 | 2622 |
| HSA-MIR-513B-5P | 99.99 | 69.96 | 2150 |
| HSA-MIR-34A-5P | 99.99 | 71.21 | 1784 |
| HSA-MIR-449A | 99.99 | 71.05 | 1776 |
| HSA-MIR-548AW | 99.99 | 72.57 | 3559 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-4715-3P | 99.98 | 66.03 | 670 |
| HSA-MIR-302C-5P | 99.97 | 72.56 | 3642 |
| HSA-MIR-34C-5P | 99.97 | 70.45 | 1577 |
| HSA-MIR-449B-5P | 99.97 | 70.26 | 1580 |
| HSA-MIR-3688-3P | 99.97 | 72.02 | 2834 |
| HSA-MIR-570-3P | 99.96 | 72.41 | 4910 |
| HSA-MIR-5688 | 99.96 | 73.23 | 4504 |
| HSA-MIR-3658 | 99.96 | 73.87 | 4379 |
| HSA-MIR-495-3P | 99.96 | 72.81 | 4197 |
| HSA-MIR-23A-3P | 99.95 | 74.24 | 3163 |
| HSA-MIR-23B-3P | 99.95 | 74.24 | 3163 |
| HSA-MIR-23C | 99.95 | 73.92 | 3192 |
| HSA-MIR-559 | 99.95 | 72.28 | 3609 |
| HSA-MIR-548AB | 99.95 | 71.31 | 3488 |
| HSA-MIR-651-3P | 99.94 | 73.48 | 5177 |
| HSA-MIR-548A-5P | 99.94 | 71.27 | 3482 |
Literature-anchored findings (GeneRIF, showing 40)
- results indicate significantly different 5-HT2C pre-mRNA editing site preferences in brains of suicide victims (PMID:11988167)
- The 5-HT2C receptor subtype polymorphism Cys23Ser is involved in the regulation of food intake in teen-aged women. (PMID:12007749)
- Evolutionary conserved microsatellites in the promoter region of the 5-hydroxytryptamine receptor 2C gene (HTR2C) are not associated with bipolar disorder in females. (PMID:12111480)
- role of helix 7 tyrosine in 5HT2c conformation (PMID:12145300)
- the 5-HT(2C) receptor polymorphism contributes little to the variation of neuroendocrinological responses elicited by activation of the hypothalamic-pituitary axis (PMID:12518270)
- An association was found between the presence of major depressive illness in Alzheimer’s disease and both the 5-HT2A and 5-HT2C polymorphisms. (PMID:12707936)
- Expression in cultured skin cells. (PMID:12767050)
- The findings are consistent a role for the Ser23 allele of 5-HT2c in mediating susceptibility to and increasing severity of anorexia nervosa. (PMID:12858032)
- Study results do not support a significant contribution of the 5-HT2c Cys23Ser polymorphism and 5-HTT promoter genotype to a putative common genetic predisposition of attention-deficit hyperactivity disorder and alcohol dependence. (PMID:14574222)
- the constitutively active 5-HT2cR isoforms are spontaneously internalized in an agonist-independent manner, directly correlated with the constitutive activity status of the RNA edited receptor variants (PMID:14602721)
- 5-HT(2C) receptor displayed considerable constitutive activity, with the Ser23 allele being significantly higher in this regard than the Cys23 form. (PMID:14699441)
- RNA editing represents a novel mechanism for regulating 5-HT2C receptor signaling to pathways linked to actin cytoskeletal organization and regulated exocytosis. (PMID:14722258)
- 5-HT2C receptor promoter polymorphism is associated with obesity (PMID:15048662)
- 5HTR2c Cys23Ser polymorphism may be associated with migraine with aura in a Japanese population. (PMID:15147464)
- Higher distribution of the -759T allele of the 5HT2C receptor in normal controls compared with in patients with schizophrenia. (PMID:15167695)
- Involvement of the -759C/T polymorphism of the 5-HT2CR in clozapine-induced weight gain in German patients with schizophrenia. (PMID:15318026)
- Mutations in 5HT2c are unlikely to be a common cause of severe early-onset human obesity. (PMID:15381968)
- 5-HT2C receptors exist as constitutive homodimers expressed on the plasma membrane of live HEK293 cells. (PMID:15518545)
- (+/-)-1-(2,5-Dimethoxy-4-iodophenyl)-2-aminopropane hydrochloride (DOI), significantly increased arachidonic acid incorporation in widespread brain areas containing 5-HT2A/2C receptors. (PMID:15562295)
- coupling of the 5-HT(2C)R to the extracellular signal-regulated kinases (ERKs) (PMID:15935077)
- The genetic polymorphisms of 5-HT2c receptor at which many of the newer antipsychotic drugs act, are prime candidates for pharmacogenetic analysis of the effects of these drugs in the treatment of schizophrenia. (PMID:15953671)
- Our results complement previous studies of HTR2C in both mice and humans, and suggest the importance of genetic variation and elucidating the fine LD structure in uncovering the genetic factors of obesity. (PMID:16021472)
- dimerization is essential for 5-HT receptor function (PMID:16195233)
- Genotypes and allele frequencies of 102T/C polymorphism of the HTR2A and 796G/C polymorphism of the HTR2C did not differ between controls and patients with obstructive sleep apnea. (PMID:16258205)
- Paradoxical actions of 5-HT2C antagonists and agonists can be reconciled and discusses both established and innovative strategies for the exploitation of 5-HT2C receptors in the improved management of depressed and anxious states. (PMID:16433010)
- analysis of serotonin 5-HT2C receptor homodimer biogenesis in the endoplasmic reticulum (PMID:16857671)
- This indicates that, overall, interaction of 5-HT(2C) receptors with PDZ proteins inhibits receptor desensitization in cortical neurons. (PMID:16914526)
- HTR2C polymorphisms were significantly associated with an increased of obesity as a result of antipsychotic use. (PMID:17016522)
- Significant differences in 5HT2CA1 allele and genotype frequencies were found between Amerindian and European populations in South America. (PMID:17039480)
- This study detected significant evidence of association between the -995A/-759T/-697C/Cys23 haplotype of the 5HT2C gene in anxious, depression and bulimia nervosa. (PMID:17055531)
- This review and extension of previous data presents support for the role of 5HT(2c) in the development of certain symptoms, although the effect size may be small. (PMID:17098333)
- HTR2C and HTR1A gene variants are not major contributors to suicide-, anger-, or aggression-related behaviors. (PMID:17192951)
- These results support the involvement of the -759C/T polymorphism of the 5-HT2C receptor gene in antipsychotics-induced weight gain in the Korean population. (PMID:17275977)
- meta-analysis provides support for the association of HTR2C in weight gain but indicates that firmly establishing the role of pharmacogenetics in clinical psychiatry requires much larger sample sizes that have been hitherto reported. (PMID:17291373)
- Flexible molecular docking, and long-time molecular dynamics (MD) simulations, was employed to construct the structure of the human 5-HT(2C) receptor and determine the characteristics of binding modes of 5-HT(2C) receptor agonists (PMID:17558446)
- Human serum albumin-advanced glycation end products stimulate phosphatidylserine externalization in platelets via 5-HT 2A/2C receptors. (PMID:17625040)
- findings suggest that HTR2C genotypes are associated with antincreased risk of metabolic syndrome in psychiatric patients taking antipsychotics (PMID:17632216)
- The association between polymorphisms in serotonergic genes (SERT and 5-HT2A, 5-HT2C) suggests that these genetic factors can modulate vulnerability to puerperal psychosis in female bipolar participants (PMID:17728663)
- HTR2C (cys23ser) polymorphism influences early onset in bipolar patients in European. (PMID:17767148)
- Patients with Schizophrenia or bipolar disorder , overexpression of the Val156-Ser158-Val160 isoform in the prefrontal cortex may represent an additional risk factor for suicidal behavior. (PMID:17848916)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | htr2cl2 | ENSDARG00000013210 |
| danio_rerio | htr2cl1 | ENSDARG00000018228 |
| mus_musculus | Htr2c | ENSMUSG00000041380 |
| drosophila_melanogaster | 5-HT2A | FBGN0087012 |
| caenorhabditis_elegans | WBGENE00021897 |
Paralogs (8): HTR2A (ENSG00000102468), HTR1B (ENSG00000135312), HTR2B (ENSG00000135914), HTR7 (ENSG00000148680), HTR5A (ENSG00000157219), HTR6 (ENSG00000158748), HTR1E (ENSG00000168830), HTR1F (ENSG00000179097)
Protein
Protein identifiers
5-hydroxytryptamine receptor 2C — P28335 (reviewed: P28335)
Alternative names: 5-hydroxytryptamine receptor 1C, Serotonin receptor 2C
All UniProt accessions (1): P28335
UniProt curated annotations — full annotation on UniProt →
Function. G-protein coupled receptor for 5-hydroxytryptamine (serotonin). Also functions as a receptor for various drugs and psychoactive substances, including ergot alkaloid derivatives, 1-2,5,-dimethoxy-4-iodophenyl-2-aminopropane (DOI) and lysergic acid diethylamide (LSD). Ligand binding causes a conformation change that triggers signaling via guanine nucleotide-binding proteins (G proteins) and modulates the activity of downstream effectors. HTR2C is coupled to G(q)/G(11) G alpha proteins and activates phospholipase C-beta, releasing diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) second messengers that modulate the activity of phosphatidylinositol 3-kinase and promote the release of Ca(2+) ions from intracellular stores, respectively. Beta-arrestin family members inhibit signaling via G proteins and mediate activation of alternative signaling pathways. Regulates neuronal activity via the activation of short transient receptor potential calcium channels in the brain, and thereby modulates the activation of pro-opiomelanocortin neurons and the release of CRH that then regulates the release of corticosterone. Plays a role in the regulation of appetite and eating behavior, responses to anxiogenic stimuli and stress. Plays a role in insulin sensitivity and glucose homeostasis.
Subunit / interactions. Interacts with MPDZ. Interacts with ARRB2. Interacts with MPP3; this interaction stabilizes the receptor at the plasma membrane and prevents the desensitization of the HTR2C receptor-mediated calcium response.
Subcellular location. Cell membrane.
Tissue specificity. Detected in brain.
Post-translational modifications. N-glycosylated.
Activity regulation. Inhibited by inverse agonist ritanserin.
Domain organisation. The PDZ domain-binding motif is involved in the interaction with MPDZ.
Similarity. Belongs to the G-protein coupled receptor 1 family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P28335-1 | 1 | yes |
| P28335-2 | 2 |
RefSeq proteins (3): NP_000859, NP_001243689, NP_001243690 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000276 | GPCR_Rhodpsn | Family |
| IPR000377 | 5HT2C_rcpt | Family |
| IPR002231 | 5HT_rcpt | Family |
| IPR017452 | GPCR_Rhodpsn_7TM | Domain |
Pfam: PF00001
UniProt features (63 total): helix 15, mutagenesis site 10, topological domain 8, transmembrane region 7, sequence variant 4, short sequence motif 3, turn 3, binding site 2, glycosylation site 2, disulfide bond 2, strand 2, signal peptide 1, chain 1, region of interest 1, compositionally biased region 1, splice variant 1
Structure
Experimental structures (PDB)
8 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 9UGL | ELECTRON MICROSCOPY | 2.65 |
| 6BQH | X-RAY DIFFRACTION | 2.7 |
| 8DPF | ELECTRON MICROSCOPY | 2.84 |
| 6BQG | X-RAY DIFFRACTION | 3 |
| 8DPH | ELECTRON MICROSCOPY | 3.2 |
| 8DPI | ELECTRON MICROSCOPY | 3.4 |
| 8DPG | ELECTRON MICROSCOPY | 3.6 |
| 8ZMF | X-RAY DIFFRACTION | 3.6 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P28335-F1 | 73.71 | 0.47 |
Antibody-complex structures (SAbDab): 4 — 8DPF, 8DPG, 8DPH, 8DPI
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (2): 139; 209
Disulfide bonds (2): 127–207, 337–341
Glycosylation sites (2): 39, 204
Mutagenesis-validated functional residues (10):
| Position | Phenotype |
|---|---|
| 159 | decreases interaction with arrb2. |
| 218 | decreased binding to inverse agonist ritanserin. |
| 223 | decreased binding to inverse agonist ritanserin. |
| 320 | decreased binding to inverse agonist ritanserin. |
| 324 | decreased binding to inverse agonist ritanserin. |
| 354 | decreased binding to inverse agonist ritanserin. |
| 456 | loss of interaction with mpdz. |
| 456 | no effect on interaction with mpdz. |
| 457 | no effect on interaction with mpdz. |
| 458 | loss of interaction with mpdz. |
Function
Pathways and Gene Ontology
Reactome pathways
8 pathways
| ID | Pathway |
|---|---|
| R-HSA-390666 | Serotonin receptors |
| R-HSA-416476 | G alpha (q) signalling events |
| R-HSA-162582 | Signal Transduction |
| R-HSA-372790 | Signaling by GPCR |
| R-HSA-373076 | Class A/1 (Rhodopsin-like receptors) |
| R-HSA-375280 | Amine ligand-binding receptors |
| R-HSA-388396 | GPCR downstream signalling |
| R-HSA-500792 | GPCR ligand binding |
MSigDB gene sets: 338 (showing top):
GOBP_RESPONSE_TO_NITROGEN_COMPOUND, LEE_NEURAL_CREST_STEM_CELL_DN, GOBP_PHOSPHOLIPID_METABOLIC_PROCESS, GOBP_REGULATION_OF_FAT_CELL_DIFFERENTIATION, GOMF_G_PROTEIN_COUPLED_SEROTONIN_RECEPTOR_ACTIVITY, BENPORATH_ES_WITH_H3K27ME3, GOBP_PHOSPHATIDYLINOSITOL_METABOLIC_PROCESS, GOBP_BEHAVIOR, GOBP_REGULATION_OF_CALCIUM_MEDIATED_SIGNALING, TGCTGCT_MIR15A_MIR16_MIR15B_MIR195_MIR424_MIR497, NKX25_02, GCANCTGNY_MYOD_Q6, GOBP_POSITIVE_REGULATION_OF_FAT_CELL_DIFFERENTIATION, GTCTACC_MIR379, GOBP_POSITIVE_REGULATION_OF_MAPK_CASCADE
GO Biological Process (21): behavioral fear response (GO:0001662), intracellular calcium ion homeostasis (GO:0006874), G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger (GO:0007187), phospholipase C-activating G protein-coupled receptor signaling pathway (GO:0007200), phospholipase C-activating serotonin receptor signaling pathway (GO:0007208), serotonin receptor signaling pathway (GO:0007210), chemical synaptic transmission (GO:0007268), locomotory behavior (GO:0007626), feeding behavior (GO:0007631), positive regulation of phosphatidylinositol biosynthetic process (GO:0010513), obsolete cGMP-mediated signaling (GO:0019934), regulation of nervous system process (GO:0031644), regulation of appetite (GO:0032098), regulation of corticotropin-releasing hormone secretion (GO:0043397), positive regulation of fat cell differentiation (GO:0045600), positive regulation of calcium-mediated signaling (GO:0050850), release of sequestered calcium ion into cytosol (GO:0051209), positive regulation of ERK1 and ERK2 cascade (GO:0070374), G protein-coupled serotonin receptor signaling pathway (GO:0098664), signal transduction (GO:0007165), G protein-coupled receptor signaling pathway (GO:0007186)
GO Molecular Function (9): Gq/11-coupled serotonin receptor activity (GO:0001587), G protein-coupled serotonin receptor activity (GO:0004993), neurotransmitter receptor activity (GO:0030594), identical protein binding (GO:0042802), serotonin binding (GO:0051378), 1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding (GO:0071886), serotonin receptor activity (GO:0099589), G protein-coupled receptor activity (GO:0004930), protein binding (GO:0005515)
GO Cellular Component (5): plasma membrane (GO:0005886), dendrite (GO:0030425), synapse (GO:0045202), G protein-coupled serotonin receptor complex (GO:0098666), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-6 pathways:
| Category | Pathways |
|---|---|
| Signaling by GPCR | 2 |
| Amine ligand-binding receptors | 1 |
| GPCR downstream signalling | 1 |
| Signal Transduction | 1 |
| GPCR ligand binding | 1 |
| Class A/1 (Rhodopsin-like receptors) | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| G protein-coupled receptor signaling pathway | 4 |
| G protein-coupled serotonin receptor signaling pathway | 2 |
| behavior | 2 |
| G protein-coupled serotonin receptor activity | 2 |
| amine binding | 2 |
| transmembrane signaling receptor activity | 2 |
| behavioral defense response | 1 |
| fear response | 1 |
| intracellular monoatomic cation homeostasis | 1 |
| calcium ion homeostasis | 1 |
| phospholipase C activator activity | 1 |
| Gq/11-coupled serotonin receptor activity | 1 |
| phospholipase C-activating G protein-coupled receptor signaling pathway | 1 |
| signal transduction | 1 |
| serotonin receptor activity | 1 |
| cellular response to dopamine | 1 |
| anterograde trans-synaptic signaling | 1 |
| phosphatidylinositol biosynthetic process | 1 |
| positive regulation of biosynthetic process | 1 |
| regulation of phosphatidylinositol biosynthetic process | 1 |
| positive regulation of phosphorus metabolic process | 1 |
| regulation of system process | 1 |
| nervous system process | 1 |
| response to nutrient levels | 1 |
| regulation of biological quality | 1 |
| corticotropin-releasing hormone secretion | 1 |
| regulation of peptide hormone secretion | 1 |
| fat cell differentiation | 1 |
| positive regulation of cell differentiation | 1 |
| regulation of fat cell differentiation | 1 |
| calcium-mediated signaling | 1 |
| regulation of calcium-mediated signaling | 1 |
| positive regulation of intracellular signal transduction | 1 |
| intercellular transport | 1 |
| calcium ion transmembrane import into cytosol | 1 |
| positive regulation of MAPK cascade | 1 |
| ERK1 and ERK2 cascade | 1 |
| regulation of ERK1 and ERK2 cascade | 1 |
| cell communication | 1 |
| cellular process | 1 |
Protein interactions and networks
STRING
1888 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| HTR2C | GNAQ | P50148 | 952 |
| HTR2C | SLC6A4 | P31645 | 915 |
| HTR2C | TPH1 | P17752 | 844 |
| HTR2C | HTR2A | P28223 | 817 |
| HTR2C | MAOB | P27338 | 796 |
| HTR2C | HTR3A | P46098 | 796 |
| HTR2C | TPH2 | Q8IWU9 | 752 |
| HTR2C | POMC | P01189 | 731 |
| HTR2C | HTR2B | P41595 | 700 |
| HTR2C | MAOA | P21397 | 684 |
| HTR2C | ARRB1 | P49407 | 655 |
| HTR2C | ARRB2 | P32121 | 648 |
| HTR2C | SLC6A2 | P23975 | 625 |
| HTR2C | SLC6A3 | Q01959 | 622 |
| HTR2C | HTR3B | O95264 | 619 |
IntAct
207 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| HTR2C | HTR2C | psi-mi:“MI:2364”(proximity) | 0.820 |
| HTR2C | HTR2C | psi-mi:“MI:0915”(physical association) | 0.820 |
| HTR2C | HTR2C | psi-mi:“MI:0403”(colocalization) | 0.820 |
| HTR2C | TMEM147 | psi-mi:“MI:0915”(physical association) | 0.740 |
| HTR2C | MPDZ | psi-mi:“MI:0407”(direct interaction) | 0.650 |
| SCRIB | HTR2C | psi-mi:“MI:0407”(direct interaction) | 0.620 |
| DLG1 | HTR2C | psi-mi:“MI:0407”(direct interaction) | 0.620 |
| HTR2C | DLG1 | psi-mi:“MI:0407”(direct interaction) | 0.620 |
| HTR2C | SCRIB | psi-mi:“MI:0407”(direct interaction) | 0.620 |
| HTR2C | HTR2A | psi-mi:“MI:2364”(proximity) | 0.610 |
| HTR2A | HTR2C | psi-mi:“MI:2364”(proximity) | 0.610 |
| HTR2A | HTR2C | psi-mi:“MI:0915”(physical association) | 0.610 |
| LIN7C | HTR2C | psi-mi:“MI:0915”(physical association) | 0.590 |
| HTR2C | LIN7C | psi-mi:“MI:0407”(direct interaction) | 0.590 |
| HTR2C | TMBIM6 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CNIH1 | HTR2C | psi-mi:“MI:0915”(physical association) | 0.560 |
| HTR2C | SLC39A9 | psi-mi:“MI:0915”(physical association) | 0.560 |
BioGRID (199): MPDZ (Two-hybrid), MPDZ (Two-hybrid), TAPBP (Affinity Capture-MS), FAM134A (Affinity Capture-MS), KLRG2 (Affinity Capture-MS), CERS5 (Affinity Capture-MS), SLC35F1 (Affinity Capture-MS), FAM210B (Affinity Capture-MS), UBE2Q1 (Affinity Capture-MS), C6orf47 (Affinity Capture-MS), HMOX2 (Affinity Capture-MS), ITPRIPL1 (Affinity Capture-MS), FAM134C (Affinity Capture-MS), GPR50 (Affinity Capture-MS), LPCAT3 (Affinity Capture-MS)
ESM2 similar proteins: A0A2R9YJI3, B2ZHY2, B3DM66, B4XF06, D4A3U0, O02777, O43194, O46635, P08909, P08911, P0C0W8, P14842, P18599, P20272, P21554, P28223, P28335, P32240, P34311, P34968, P35363, P47746, P50128, P50129, P56971, P70259, Q09502, Q333S9, Q5IS53, Q5IS66, Q5IS73, Q5IS98, Q5R4Q6, Q5U431, Q60F97, Q6DWJ6, Q71SP5, Q75Z89, Q801M1, Q80UC8
Diamond homologs: E7EM37, G3M4F8, O02213, O08890, O18935, O19014, O19025, O42384, O42385, O73810, O77715, O77723, O77830, P08908, P08909, P08913, P11614, P14416, P18825, P18871, P19020, P20288, P21917, P22086, P22270, P22909, P24628, P28221, P28222, P28334, P28335, P28564, P28566, P30545, P30728, P30729, P30939, P32304, P32305, P34968
SIGNOR signaling
11 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| agomelatine | down-regulates | HTR2C | “chemical inhibition” |
| HTR2C | “up-regulates activity” | GNAI1 | binding |
| HTR2C | “up-regulates activity” | GNAI3 | binding |
| HTR2C | “up-regulates activity” | GNAO1 | binding |
| HTR2C | “up-regulates activity” | GNAZ | binding |
| HTR2C | “up-regulates activity” | GNAQ | binding |
| HTR2C | “up-regulates activity” | GNA14 | binding |
| HTR2C | “up-regulates activity” | GNA15 | binding |
| HTR2C | “up-regulates activity” | GNA12 | binding |
| serotonin(1+) | “up-regulates activity” | HTR2C | “chemical activation” |
| serotonin | “up-regulates activity” | HTR2C | “chemical activation” |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 116 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Ras activation upon Ca2+ influx through NMDA receptor | 5 | 39.1× | 1e-05 |
| Unblocking of NMDA receptors, glutamate binding and activation | 5 | 37.2× | 1e-05 |
| Negative regulation of NMDA receptor-mediated neuronal transmission | 5 | 37.2× | 1e-05 |
| Long-term potentiation | 5 | 32.6× | 2e-05 |
| Assembly and cell surface presentation of NMDA receptors | 8 | 27.8× | 5e-08 |
| Neurexins and neuroligins | 9 | 24.3× | 3e-08 |
| Protein-protein interactions at synapses | 5 | 18.2× | 3e-04 |
| RHOQ GTPase cycle | 5 | 12.4× | 1e-03 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| establishment or maintenance of epithelial cell apical/basal polarity | 10 | 52.8× | 1e-12 |
| protein localization to synapse | 6 | 41.8× | 1e-06 |
| receptor clustering | 7 | 39.7× | 1e-07 |
| regulation of postsynaptic membrane neurotransmitter receptor levels | 6 | 27.0× | 1e-05 |
| bicellular tight junction assembly | 6 | 18.0× | 7e-05 |
| G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger | 5 | 14.2× | 1e-03 |
| cell-cell adhesion | 10 | 9.2× | 1e-05 |
| protein-containing complex assembly | 8 | 8.3× | 4e-04 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
147 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 74 |
| Likely benign | 38 |
| Benign | 5 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
2717 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| X:114586462:GC:G | acceptor_gain | 1.0000 |
| X:114612861:A:T | donor_gain | 1.0000 |
| X:114613877:CAACT:C | donor_gain | 1.0000 |
| X:114613878:AACT:A | donor_gain | 1.0000 |
| X:114613879:ACT:A | donor_gain | 1.0000 |
| X:114613880:CT:C | donor_gain | 1.0000 |
| X:114613882:G:GG | donor_gain | 1.0000 |
| X:114715375:TTATA:T | donor_gain | 1.0000 |
| X:114726856:A:AG | acceptor_gain | 1.0000 |
| X:114726857:G:GG | acceptor_gain | 1.0000 |
| X:114726857:GAAA:G | acceptor_gain | 1.0000 |
| X:114726967:TTCCT:T | donor_gain | 1.0000 |
| X:114726972:G:GG | donor_gain | 1.0000 |
| X:114726977:G:GT | donor_gain | 1.0000 |
| X:114731293:GT:G | acceptor_gain | 1.0000 |
| X:114731606:TG:T | donor_gain | 1.0000 |
| X:114731606:TGG:T | donor_loss | 1.0000 |
| X:114731607:GG:G | donor_gain | 1.0000 |
| X:114731607:GGT:G | donor_loss | 1.0000 |
| X:114731608:GTAA:G | donor_loss | 1.0000 |
| X:114906584:TTTA:T | acceptor_loss | 1.0000 |
| X:114906585:TTA:T | acceptor_loss | 1.0000 |
| X:114906587:A:AG | acceptor_gain | 1.0000 |
| X:114906587:AG:A | acceptor_gain | 1.0000 |
| X:114906587:AGGT:A | acceptor_gain | 1.0000 |
| X:114906588:G:GT | acceptor_gain | 1.0000 |
| X:114906588:GG:G | acceptor_gain | 1.0000 |
| X:114906588:GGT:G | acceptor_gain | 1.0000 |
| X:114906588:GGTG:G | acceptor_gain | 1.0000 |
| X:114906588:GGTGT:G | acceptor_gain | 1.0000 |
AlphaMissense
3017 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| X:114731471:C:A | N71K | 1.000 |
| X:114731471:C:G | N71K | 1.000 |
| X:114731533:T:C | L92S | 1.000 |
| X:114731542:T:C | L95P | 1.000 |
| X:114731545:C:A | A96D | 1.000 |
| X:114731553:G:C | D99H | 1.000 |
| X:114731554:A:C | D99A | 1.000 |
| X:114731554:A:G | D99G | 1.000 |
| X:114731554:A:T | D99V | 1.000 |
| X:114731555:T:A | D99E | 1.000 |
| X:114731555:T:G | D99E | 1.000 |
| X:114848084:A:G | H144R | 1.000 |
| X:114848087:T:C | L145P | 1.000 |
| X:114848096:T:A | I148K | 1.000 |
| X:114848108:G:C | R152P | 1.000 |
| X:114848188:T:A | W179R | 1.000 |
| X:114848188:T:C | W179R | 1.000 |
| X:114906657:T:A | C207S | 1.000 |
| X:114906658:G:A | C207Y | 1.000 |
| X:114906658:G:C | C207S | 1.000 |
| X:114906659:C:G | C207W | 1.000 |
| X:114906705:T:C | F223L | 1.000 |
| X:114906707:C:A | F223L | 1.000 |
| X:114906707:C:G | F223L | 1.000 |
| X:114906715:C:A | P226Q | 1.000 |
| X:114906715:C:G | P226R | 1.000 |
| X:114906996:T:C | F320L | 1.000 |
| X:114906998:T:A | F320L | 1.000 |
| X:114906998:T:G | F320L | 1.000 |
| X:114907008:T:A | W324R | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000035645 (X:114838940 A>G), RS1000051736 (X:114880607 C>A,T), RS1000062868 (X:114676615 G>A), RS1000074196 (X:114677054 T>A), RS1000104056 (X:114612351 G>A), RS1000111329 (X:114711935 G>T), RS1000111624 (X:114804637 G>A), RS1000112725 (X:114588463 A>G), RS1000148008 (X:114742411 C>A,T), RS1000148768 (X:114848309 G>A,T), RS1000189239 (X:114648443 C>T), RS1000214653 (X:114583010 C>T), RS1000215745 (X:114717405 T>C), RS1000228538 (X:114777019 G>A), RS1000248957 (X:114842854 C>A)
Disease associations
OMIM: gene MIM:312861 | disease phenotypes:
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| obesity disorder | Strong | Autosomal dominant |
Mondo (2): prostate cancer (MONDO:0008315), obesity disorder (MONDO:0011122)
Orphanet (1): Familial prostate cancer (Orphanet:1331)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D011471 | Prostatic Neoplasms | C04.588.945.440.770; C12.100.500.260.750; C12.100.500.565.625; C12.200.294.260.750; C12.200.294.565.625; C12.200.758.409.750; C12.900.619.750 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (5): CHEMBL2095200 (PROTEIN FAMILY), CHEMBL2096662 (SELECTIVITY GROUP), CHEMBL2096904 (PROTEIN FAMILY), CHEMBL2111466 (SELECTIVITY GROUP), CHEMBL225 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
276 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 649,680 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1423 | PIMOZIDE | 4 | 17,310 |
| CHEMBL1729 | CISAPRIDE | 4 | 14,365 |
| CHEMBL42 | CLOZAPINE | 4 | 37,581 |
| CHEMBL54 | HALOPERIDOL | 4 | 60,883 |
| CHEMBL715 | OLANZAPINE | 4 | 40,057 |
| CHEMBL716 | QUETIAPINE | 4 | 26,465 |
| CHEMBL360328 | LORCASERIN | 4 | 2,132 |
| CHEMBL11 | IMIPRAMINE | 4 | 48,893 |
| CHEMBL104 | CLOTRIMAZOLE | 4 | 56,325 |
| CHEMBL1065 | METHYSERGIDE | 4 | 8,455 |
| CHEMBL1071 | OXAPROZIN | 4 | 51,044 |
| CHEMBL1078261 | PROPIVERINE | 4 | 4,890 |
| CHEMBL10878 | AGOMELATINE | 4 | 4,528 |
| CHEMBL109 | VALPROIC ACID | 4 | 65,937 |
| CHEMBL1095777 | INDACATEROL | 4 | 2,735 |
| CHEMBL1108 | DROPERIDOL | 4 | 16,888 |
| CHEMBL1110 | ALOSETRON | 4 | 10,794 |
| CHEMBL1112 | ARIPIPRAZOLE | 4 | 24,205 |
| CHEMBL1113 | AMOXAPINE | 4 | 20,128 |
| CHEMBL1117 | IDARUBICIN | 4 | 136,065 |
| CHEMBL1123 | DICYCLOMINE | 4 | |
| CHEMBL1171837 | PONATINIB | 4 | |
| CHEMBL1172 | DESLORATADINE | 4 | |
| CHEMBL1175 | DULOXETINE | 4 | |
| CHEMBL1179047 | CHLOROPROCAINE | 4 | |
| CHEMBL1200406 | DIMENHYDRINATE | 4 | |
| CHEMBL1200492 | NEFAZODONE HYDROCHLORIDE | 4 | |
| CHEMBL1200517 | DIHYDROERGOTAMINE MESYLATE | 4 | |
| CHEMBL1200776 | CINACALCET HYDROCHLORIDE | 4 | |
| CHEMBL1200938 | METHYSERGIDE MALEATE | 4 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB clinical annotations
12 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs1414334 | Toxicity | 3 | olanzapine | Mental Disorders |
| rs1414334 | Toxicity | 3 | clozapine | Metabolic Syndrome;Schizophrenia |
| rs1414334 | Toxicity | 3 | risperidone | Metabolic Syndrome |
| rs2497538 | Toxicity | 3 | olanzapine | Weight gain |
| rs3813928 | Efficacy | 3 | risperidone | Autism |
| rs3813929 | Toxicity | 3 | antipsychotics | Mental Disorders |
| rs3813929 | Toxicity | 3 | olanzapine | Mental Disorders;Schizophrenia |
| rs3813929 | Toxicity | 3 | risperidone | Mental Disorders;Schizophrenia |
| rs3813929 | Toxicity | 3 | clozapine | Mental Disorders;Schizophrenia |
| rs518147 | Toxicity | 3 | olanzapine | Schizophrenia;Weight gain |
| rs6318 | Toxicity | 3 | risperidone | Schizophrenia;Weight gain |
| rs6318 | Efficacy | 3 | escitalopram | Neuropathic pain |
PharmGKB variants
11 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs6318 | HTR2C | 3 | 1.50 | 2 | escitalopram;risperidone |
| rs518147 | HTR2C | 3 | 3.25 | 1 | olanzapine |
| rs539748 | HTR2C | 0.00 | 0 | ||
| rs1414334 | HTR2C | 3 | 6.88 | 3 | risperidone;olanzapine;clozapine |
| rs2497538 | HTR2C | 3 | 2.25 | 1 | olanzapine |
| rs3813928 | HTR2C | 3 | 1.50 | 1 | risperidone |
| rs3813929 | HTR2C | 3 | 4.00 | 4 | antipsychotics;olanzapine;risperidone;clozapine |
| rs1023574 | HTR2C | 0.00 | 0 | ||
| rs9698290 | HTR2C, MIR764 | 0.00 | 0 | ||
| rs498207 | HTR2C | 0.00 | 0 | ||
| rs12836771 | HTR2C, MIR1264, MIR1912 | 0.00 | 0 |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: gpcr — 5-Hydroxytryptamine receptors
Most potent curated ligand interactions (102 total), top 25:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| ritanserin | Antagonist | 9.6 | pKi |
| mesulergine | Inverse agonist | 9.3 | pKi |
| [3H]mesulergine | Inverse agonist | 9.3 | pKd |
| mianserin | Inverse agonist | 9.2 | pKi |
| sertindole | Inverse agonist | 9.2 | pKi |
| methysergide | Antagonist | 9.1 | pKi |
| SB 228357 | Antagonist | 9.1 | pKi |
| ziprasidone | Inverse agonist | 9.01 | pKi |
| (+)-LSD | Full agonist | 9.0 | pKi |
| [125I]DOI | Full agonist | 9.0 | pKd |
| SB 242084 | Antagonist | 9.0 | pKi |
| SB 243213 | Antagonist | 9.0 | pEC50 |
| YM348 | Full agonist | 9.0 | pKi |
| FR260010 | Antagonist | 9.0 | pKi |
| brolamfetamine | Full agonist | 8.9 | pKi |
| metergoline | Inverse agonist | 8.8 | pKi |
| ergotamine | Partial agonist | 8.7 | pKi |
| SB 221284 | Antagonist | 8.7 | pKi |
| amoxapine | Antagonist | 8.7 | pKi |
| clozapine | Inverse agonist | 8.7 | pKi |
| DOI | Full agonist | 8.6 | pKi |
| zotepine | Inverse agonist | 8.6 | pKi |
| α-methyl-5-HT | Full agonist | 8.6 | pKi |
| Lysergide | Full agonist | 8.6 | pKi |
| 5-hydroxytryptamine | Full agonist | 8.6 | pKi |
Binding affinities (BindingDB)
368 measured of 401 human assays (457 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| (R)-2-(4-Bromo-2,5-dimethoxy-phenyl)-1-methyl-ethylamine | EC50 | 0.018 nM | |
| 2-(8-Bromo-2,3,6,7-tetrahydro-benzo[1,2-b;4,5-b’]difuran-4-yl)-ethylamine | EC50 | 0.029 nM | |
| DOHx | KI | 0.1 nM | |
| roxindole | KI | 0.11 nM | |
| 3,3-diethyl-1-[(4R,7R)-6-methyl-6,11-diazatetracyclo[7.6.1.0^{2,7}.0^{12,16}]hexadeca-1(15),2,9,12(16),13-pentaen-4-yl]urea | KI | 0.15 nM | |
| 4-methyl-2-[4-(4-phenylpiperazin-1-yl)butyl]-1,2,4-triazine-3,5-dione | KI | 0.15 nM | US-9290463: Radiolabeled compounds and uses thereof |
| CHEMBL1434583 | EC50 | 0.181 nM | |
| 1-(2-Chloro-3,4-dimethoxybenzyl)-6-methyl-2,3,4,9-tetrahydro-1H-pyrido[3,4-b]indole | KI | 0.2 nM | |
| (S,S)-reboxetine | KI | 0.3 nM | |
| NSC_8226 | KI | 0.35 nM | |
| 2C-T-2 | EC50 | 0.354 nM | |
| DOBz | KI | 0.4 nM | |
| CAS_82830-44-2 | EC50 | 0.418 nM | |
| LSD,2-Bromo | KI | 0.48 nM | |
| 2-(4-Ethylsulfanyl-2,5-dimethoxy-phenyl)-1-methyl-ethylamine | EC50 | 0.489 nM | |
| 2-Chlor-11-(2-dimethylaminoaethoxy)-dibenzo(b,f)-thiepin | KI | 0.5 nM | |
| 3-(10,11-dihydro-5H-dibenzo[b,f]azepin-5-yl)-N-methylpropan-1-amine | KI | 0.6 nM | |
| (S)-1-(4-bromo-2,5-dimethoxyphenyl)propan-2-amine | EC50 | 0.66 nM | |
| NSC_3981 | KI | 0.76 nM | |
| 2-(2,5-Dimethoxy-4-propyl-phenyl)-1-methyl-ethylamine(DOPR) | KI | 0.9 nM | |
| LY-193525 | KI | 0.9 nM | |
| S-(-)-DOET | EC50 | 0.965 nM | |
| 5,6-difluoroindol-methylethylamine | KI | 0.98 nM | |
| CAS_113-15-5 | KI | 0.98 nM | |
| eplivanserin | IC50 | 1 nM | |
| METHIOTHEPIN | KI | 1 nM | |
| 3-{2-[4-(4-Fluoro-benzoyl)-piperidin-1-yl]-ethyl}-2-methyl-pyrido[1,2-a]pyrimidin-4-one | KI | 1.08 nM | |
| (4R,7R)-N,N-diethyl-6-methyl-6,11-diazatetracyclo[7.6.1.0^{2,7}.0^{12,16}]hexadeca-1(16),2,9,12,14-pentaene-4-carboxamide | KI | 1.09 nM | |
| 14C-5-hydroxy tryptamine creatinine disulfate | KI | 1.2 nM | |
| (1S,2R,10S,11S,14S,15S)-14-(2-hydroxyacetyl)-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-6-en-5-one | KI | 1.4 nM | |
| SB 215505 | KI | 1.48 nM | |
| CAS_62865 | KI | 1.5 nM | |
| 2-(4-Bromo-2,5-dimethoxy-phenyl)-ethylamine | EC50 | 1.89 nM | |
| ACP-103 | IC50 | 1.9 nM | |
| 1-{5-[(5-chloro-2-fluorobenzyl)oxy]-1-(cyclopentylmethyl)-1H-pyrazol-3-yl}-N-methylmethanamine | KI | 1.9 nM | US-10183913: Pyrazole compound |
| 5-[2-(4-Benzo[d]isothiazol-3-yl-piperazin-1-yl)-ethyl]-6-chloro-1,3-dihydro-indol-2-one | KI | 1.9 nM | |
| Permax | KI | 1.91 nM | |
| 1-{1-(cyclopentylmethyl)-5-[(2,4-difluorobenzyl)oxy]-1H-pyrazol-3-yl}-N-methylmethanamine | KI | 2.2 nM | US-10183913: Pyrazole compound |
| CAS_17692-51-2 | KI | 2.29 nM | |
| (-)-1-{1-(2-cyclopentylethyl)-5-[(2,5-difluorobenzyl)-oxy]-1H-pyrazol-3-yl}-N-methylethanamine | KI | 2.3 nM | US-10183913: Pyrazole compound |
| 1-(4-ethyl-2,5-dimethoxyphenyl)propan-2-amine | EC50 | 2.4 nM | |
| 2-(2,5-dimethoxy-4-ethylphenyl)ethylamine | EC50 | 2.5 nM | |
| 2-[2,5-dimethoxy-4-(trifluoromethylsulfanyl)phenyl]ethanamine | KI | 2.5 nM | US-20250236589: THERAPEUTIC PHENETHYLAMINE COMPOSITIONS AND METHODS OF USE |
| 1-{5-[(5-Chloro-2-fluorobenzyl)oxy]-1-(3-fluoro-3-methylbutyl)-1H-pyrazol-3-yl}-N-methylmethanamine hydrochloride | KI | 2.6 nM | US-10183913: Pyrazole compound |
| (R)-2-(4-iodo-2,5-dimethoxyphenyl)-1-methylethylamine | EC50 | 2.85 nM | |
| 1-{1-(cyclohexylmethyl)-5-[(2,5-difluorobenzyl)oxy]-1H-pyrazol-3-yl}-N-methylmethanamine | KI | 2.9 nM | US-10183913: Pyrazole compound |
| N-(4-Methylbenzyl)-N-(1-methyl-4-piperidinyl)-4-methoxybenzeneacetamide | KI | 2.9 nM | |
| 4-[4-(4-Chloro-phenyl)-4-hydroxy-piperidin-1-yl]-1-(4-fluoro-phenyl)-butan-1-one;propionate(HCl) | KI | 2.92 nM | |
| 8-[4-(4-fluorophenyl)-4-keto-butyl]-1-phenyl-1,3,8-triazaspiro[4.5]decan-4-one | KI | 2.94 nM | US-9359372: Hexahydrodibenzo[a,g]quinolizine compound, preparation method thereof, pharmaceutical composition and use thereof |
| (S)-mianserin | KI | 3 nM |
ChEMBL bioactivities
5891 potent at pChembl≥5 of 6011 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 10.70 | Ki | 0.02 | nM | CHEMBL149024 |
| 10.48 | Ki | 0.033 | nM | CHEMBL1172812 |
| 10.39 | Ki | 0.041 | nM | APLYSINOPSIN |
| 10.20 | EC50 | 0.0631 | nM | CHEMBL4765074 |
| 10.10 | Ki | 0.079 | nM | CHEMBL1173408 |
| 10.05 | EC50 | 0.09 | nM | SEROTONIN |
| 10.00 | EC50 | 0.1 | nM | CHEMBL4213447 |
| 10.00 | EC50 | 0.1 | nM | CHEMBL595195 |
| 10.00 | EC50 | 0.1 | nM | CHEMBL609306 |
| 9.97 | EC50 | 0.108 | nM | CHEMBL4213447 |
| 9.96 | EC50 | 0.11 | nM | CHEMBL494947 |
| 9.96 | Ki | 0.11 | nM | CHEMBL1173820 |
| 9.94 | EC50 | 0.116 | nM | CHEMBL4213379 |
| 9.92 | IC50 | 0.12 | nM | CHEMBL5078731 |
| 9.92 | EC50 | 0.12 | nM | SEROTONIN |
| 9.90 | EC50 | 0.1259 | nM | CHEMBL4213379 |
| 9.90 | EC50 | 0.1259 | nM | SEROTONIN |
| 9.87 | EC50 | 0.1349 | nM | SEROTONIN |
| 9.85 | EC50 | 0.14 | nM | SEROTONIN |
| 9.80 | Ki | 0.1585 | nM | CHEMBL4765074 |
| 9.80 | Kd | 0.1585 | nM | CHEMBL323208 |
| 9.78 | EC50 | 0.166 | nM | SEROTONIN |
| 9.77 | EC50 | 0.17 | nM | SEROTONIN |
| 9.74 | EC50 | 0.18 | nM | OXITRIPTAN |
| 9.74 | EC50 | 0.182 | nM | SEROTONIN |
| 9.72 | EC50 | 0.19 | nM | CHEMBL4208452 |
| 9.72 | EC50 | 0.1905 | nM | SEROTONIN |
| 9.72 | EC50 | 0.19 | nM | SEROTONIN |
| 9.70 | Ki | 0.1995 | nM | CHEMBL93862 |
| 9.70 | EC50 | 0.1995 | nM | CHEMBL3947276 |
| 9.70 | Ki | 0.2 | nM | CHEMBL408579 |
| 9.70 | Ki | 0.2 | nM | CHEMBL261476 |
| 9.70 | EC50 | 0.1995 | nM | CHEMBL4776557 |
| 9.70 | Ki | 0.2 | nM | SERTINDOLE |
| 9.70 | EC50 | 0.2 | nM | CHEMBL171774 |
| 9.68 | Ki | 0.21 | nM | CHEMBL193639 |
| 9.68 | EC50 | 0.21 | nM | SEROTONIN |
| 9.66 | EC50 | 0.2188 | nM | OXITRIPTAN |
| 9.64 | EC50 | 0.23 | nM | CHEMBL172159 |
| 9.60 | Ki | 0.2512 | nM | CHEMBL91221 |
| 9.60 | Ki | 0.2512 | nM | CHEMBL4213379 |
| 9.52 | Ki | 0.3 | nM | CHEMBL190699 |
| 9.52 | Ki | 0.3 | nM | CHEMBL101008 |
| 9.52 | Ki | 0.3 | nM | CHEMBL305275 |
| 9.50 | EC50 | 0.3162 | nM | CHEMBL3979806 |
| 9.50 | Ki | 0.3162 | nM | CHEMBL3959570 |
| 9.50 | Ki | 0.3162 | nM | CHEMBL377174 |
| 9.50 | Ki | 0.3162 | nM | CHEMBL4776557 |
| 9.50 | Ki | 0.3162 | nM | CHEMBL14111 |
| 9.49 | EC50 | 0.32 | nM | SEROTONIN HYDROCHLORIDE |
PubChem BioAssay actives
2969 with measured affinity, of 6100 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 2-(4-ethylsulfanyl-2,5-dimethoxyphenyl)ethanamine | 2060762: Ray2010 Assay 75 from Article : “Psychedelics and the human receptorome.” | ec50 | <0.0001 | uM |
| (2R)-1-(4-bromo-2,5-dimethoxyphenyl)propan-2-amine | 2060762: Ray2010 Assay 75 from Article : “Psychedelics and the human receptorome.” | ec50 | <0.0001 | uM |
| 1-(4-ethylsulfanyl-2,5-dimethoxyphenyl)propan-2-amine | 2060762: Ray2010 Assay 75 from Article : “Psychedelics and the human receptorome.” | ec50 | 0.0001 | uM |
| 2-(4-bromo-2,3,6,7-tetrahydrofuro[2,3-f][1]benzofuran-8-yl)ethanamine | 2060762: Ray2010 Assay 75 from Article : “Psychedelics and the human receptorome.” | ec50 | 0.0001 | uM |
| (7S)-7-(2-chlorophenoxy)-2-piperazin-1-yl-6,7-dihydro-5H-cyclopenta[b]pyridine | 455197: Agonist activity against human 5HT2C receptor by FLIPR assay | ec50 | 0.0001 | uM |
| (6aR)-4-(cyclobutylmethyl)-6,6a,7,8,9,10-hexahydro-5H-pyrazino[1,2-a][1,8]naphthyridine | 1387524: Agonist activity at recombinant 5-HT2C receptor (unknown origin) expressed in HEK293 cells assessed as increase in [3H]-inositol phosphate accumulation by scintillation counting method | ec50 | 0.0001 | uM |
| (6aR)-4-benzyl-6,6a,7,8,9,10-hexahydro-5H-pyrazino[1,2-a][1,8]naphthyridine | 1387524: Agonist activity at recombinant 5-HT2C receptor (unknown origin) expressed in HEK293 cells assessed as increase in [3H]-inositol phosphate accumulation by scintillation counting method | ec50 | 0.0001 | uM |
| (6aR)-4-propyl-6,6a,7,8,9,10-hexahydro-5H-pyrazino[1,2-a][1,8]naphthyridine | 1709163: Agonist activity at 5-HT2CR (unknown origin) transfected in human HEK293 cells by IP3 accumulation assay | ec50 | 0.0001 | uM |
| 1-(cyclopropylmethyl)-3-[2-(dimethylamino)ethyl]indol-4-ol | 1834410: Modulation of human 5HT2C expressed in HEK293T cells co-transfected with Galphaq-RLuc8, Ggamma1-GFP2 and Gbeta1 assessed as dissociation of Galphaq from Ggamma1 preincubated for 1 hr followed by addition of coelenterazine 400a substrate and measured after 15 mins by BRET assay | ic50 | 0.0001 | uM |
| (2S)-1-(4-bromo-2,5-dimethoxyphenyl)propan-2-amine | 2060762: Ray2010 Assay 75 from Article : “Psychedelics and the human receptorome.” | ec50 | 0.0001 | uM |
| 2-(6-chloro-9-thia-1-azatricyclo[6.3.1.04,12]dodeca-2,4(12),5,7-tetraen-3-yl)ethanamine | 5843: Functional agonist activity of compound was determined by fluorescence-based assay measuring intracellular calcium mobilization for 5-HT2c receptor cell line | ec50 | 0.0002 | uM |
| 7-propyl-2,3,4,4a,5,6-hexahydro-1H-pyrazino[1,2-a]quinoline | 1332010: Agonist activity at unedited 5-HT2C receptor (unknown origin) expressed in HEK293 cells assessed as [3H]inositol phosphate accumulation after 2 hrs by scintillation counting | ec50 | 0.0002 | uM |
| (6aR)-4-[(3-fluorophenyl)methyl]-6,6a,7,8,9,10-hexahydro-5H-pyrazino[1,2-a][1,8]naphthyridine | 1387524: Agonist activity at recombinant 5-HT2C receptor (unknown origin) expressed in HEK293 cells assessed as increase in [3H]-inositol phosphate accumulation by scintillation counting method | ec50 | 0.0002 | uM |
| (4aR)-7-propyl-2,3,4,4a,5,6-hexahydro-1H-pyrazino[1,2-a]quinoline | 1709163: Agonist activity at 5-HT2CR (unknown origin) transfected in human HEK293 cells by IP3 accumulation assay | ec50 | 0.0002 | uM |
| 2-(1-azatricyclo[6.3.1.04,12]dodeca-2,4,6,8(12)-tetraen-3-yl)ethanamine | 5843: Functional agonist activity of compound was determined by fluorescence-based assay measuring intracellular calcium mobilization for 5-HT2c receptor cell line | ec50 | 0.0002 | uM |
| 2-(4-ethyl-2,5-dimethoxyphenyl)ethanamine | 2060762: Ray2010 Assay 75 from Article : “Psychedelics and the human receptorome.” | ec50 | 0.0002 | uM |
| 1-(4-bromo-2,3,6,7-tetrahydrofuro[2,3-f][1]benzofuran-8-yl)propan-2-amine | 5858: Agonistic activity at cloned human 5-hydroxytryptamine 2C receptor using [125I]DOI as radioligand | ki | 0.0003 | uM |
| (2R)-1-(4-bromo-2,3,6,7-tetrahydrofuro[2,3-f][1]benzofuran-8-yl)propan-2-amine | 5863: Binding ability of compound at cloned human 5-hydroxytryptamine 2C receptor using [125 I]DOI as radioligand | ki | 0.0003 | uM |
| 5-methoxy-N-[4-methyl-3-(4-methyl-3-pyridinyl)phenyl]-6-(trifluoromethyl)-2,3-dihydroindole-1-carboxamide | 5656: Binding affinity towards human cloned 5-hydroxytryptamine receptor 2C in HEK293 cells, using [3H]mesulergine as radioligand. | ki | 0.0003 | uM |
| 7-ethylsulfanyl-2,3,4,4a,5,6-hexahydro-1H-pyrazino[1,2-a]quinoline | 1332010: Agonist activity at unedited 5-HT2C receptor (unknown origin) expressed in HEK293 cells assessed as [3H]inositol phosphate accumulation after 2 hrs by scintillation counting | ec50 | 0.0003 | uM |
| 7-(thiophen-2-ylmethyl)-2,3,4,4a,5,6-hexahydro-1H-pyrazino[1,2-a]quinoline | 1332014: Displacement of [125I]DOI from recombinant human 5-HT2C receptor expressed in HEK293 cell membranes after 1 hr by scintillation counting | ki | 0.0003 | uM |
| Serotonin Hydrochloride | 1880144: Agonist activity at human 5HT2C receptor stably expressed in Flp-In-T-REx-293 cells assessed as increase in Gq-mediated calcium flux by Fluo-4 direct dye based FLIPR Tetra assay | ec50 | 0.0003 | uM |
| 1-benzhydryl-6-chloro-2,3,4,9-tetrahydro-1H-pyrido[3,4-b]indole;hydrochloride | 1880144: Agonist activity at human 5HT2C receptor stably expressed in Flp-In-T-REx-293 cells assessed as increase in Gq-mediated calcium flux by Fluo-4 direct dye based FLIPR Tetra assay | ec50 | 0.0003 | uM |
| 1-[4-methoxy-3-(2-piperidin-1-ylethoxy)phenyl]-4-(4-methylphenyl)-2H-pyrrol-5-one | 269243: Binding affinity to human 5HT2C receptor | ki | 0.0003 | uM |
| (4R,10aR)-7-chloro-4,6-dimethyl-1,2,3,4,10,10a-hexahydropyrazino[1,2-a]indole | 238993: Binding affinity toward 5-HT2C receptor evaluated by displacement of [3H]5-HT radioligand | ki | 0.0003 | uM |
| 6-chloro-5-methyl-N-[6-[(2-methyl-3-pyridinyl)oxy]-3-pyridinyl]-2,3-dihydroindole-1-carboxamide | 1664657: Antagonist activity at recombinant human 5-HT2C expressed in human U2OS cells by pathhunter beta-arrestin assay | ic50 | 0.0003 | uM |
| 5-methoxy-N-[5-(4-methyl-3-pyridinyl)-3-pyridinyl]-6-(trifluoromethyl)-2,3-dihydroindole-1-carboxamide | 5656: Binding affinity towards human cloned 5-hydroxytryptamine receptor 2C in HEK293 cells, using [3H]mesulergine as radioligand. | ki | 0.0004 | uM |
| 5-fluoro-2-[4-methoxy-3-[2-(4-methylpiperidin-1-yl)ethoxy]phenyl]-7-(trifluoromethyl)-3H-isoindol-1-one | 292745: Displacement of [3H]mesulergine from 5HT2C receptor expressed in HEK293 cells | ki | 0.0004 | uM |
| 7-benzyl-8-fluoro-2,3,4,4a,5,6-hexahydro-1H-pyrazino[1,2-a]quinoline | 1332014: Displacement of [125I]DOI from recombinant human 5-HT2C receptor expressed in HEK293 cell membranes after 1 hr by scintillation counting | ki | 0.0004 | uM |
| (6aR)-4-(2-methylpropyl)-6,6a,7,8,9,10-hexahydro-5H-pyrazino[1,2-a][1,8]naphthyridine | 1709163: Agonist activity at 5-HT2CR (unknown origin) transfected in human HEK293 cells by IP3 accumulation assay | ec50 | 0.0004 | uM |
| 1-[(5-fluoro-2-pyridinyl)methyl]-1-[(8S)-5-methyl-5-azaspiro[2.5]octan-8-yl]-3-[[4-(2-methylpropoxy)phenyl]methyl]urea | 2111506: Displacement of [3H]ketanserin from human 5-HT2C receptor transfected in Jump-In GripTite HEK293 cell membrane measured after 3 hrs incubation by scintillation proximity assay (SPA) | ki | 0.0004 | uM |
| N-[6-[(2-methyl-3-pyridinyl)oxy]-3-pyridinyl]-5-methylsulfanyl-6-(trifluoromethyl)-2,3-dihydroindole-1-carboxamide | 5659: Binding affinity towards human cloned 5-hydroxytryptamine 2C receptor of HEK293 cells by displacement of [3H]mesulergine | ki | 0.0004 | uM |
| 5-methyl-N-[5-methyl-6-(pyridin-2-ylmethoxy)-3-pyridinyl]-6-(trifluoromethyl)-2,3-dihydroindole-1-carboxamide | 5660: In vitro binding affinity at human cloned 5-hydroxytryptamine 2C receptor of HEK293 cells by [3H]mesulergine displacement. | ki | 0.0004 | uM |
| 1-(7-methoxy-4,4-dimethylindeno[1,2-b]pyrrol-1-yl)propan-2-amine | 5645: Binding affinity against human 5-hydroxytryptamine 2C receptor using displacement of [3H]DOB | ki | 0.0004 | uM |
| 1-methyl-4-(3-methylsulfanyl-5,6-dihydrobenzo[b][1]benzothiepin-5-yl)piperazine | 752105: Antagonist activity at serotonin-activated human recombinant 5HT-2C receptor expressed in HEK293 cells assessed as decrease in intracellular calcium level after 5 mins measured for 1 min by fluorescence assay | ec50 | 0.0004 | uM |
| 5-methoxy-N-(4-methoxy-3-pyridin-3-ylphenyl)-6-(trifluoromethyl)-2,3-dihydroindole-1-carboxamide | 5656: Binding affinity towards human cloned 5-hydroxytryptamine receptor 2C in HEK293 cells, using [3H]mesulergine as radioligand. | ki | 0.0005 | uM |
| 5-methoxy-N-(7-pyridin-3-yl-2,3-dihydro-1-benzofuran-5-yl)-6-(trifluoromethyl)-2,3-dihydroindole-1-carboxamide | 5656: Binding affinity towards human cloned 5-hydroxytryptamine receptor 2C in HEK293 cells, using [3H]mesulergine as radioligand. | ki | 0.0005 | uM |
| 1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine | 2104596: Binding affinity to human [125I]DOI-labeled 5-HT2C receptor expressed in HEK293 cell membrane incubated for 60 mins | ki | 0.0005 | uM |
| (6aR)-4-benzyl-6,6a,7,8,9,10-hexahydro-5H-pyrazino[1,2-a][1,7]naphthyridine | 1709164: Displacement of [125I]-DOI from recombinant human 5HT2CR transfected in human HEK293 cells incubated for 45 mins by radioligand binding assay | ki | 0.0005 | uM |
| 6-chloro-1-(2,4,5-trimethoxyphenyl)-2,3,4,9-tetrahydro-1H-pyrido[3,4-b]indole;hydrochloride | 1880144: Agonist activity at human 5HT2C receptor stably expressed in Flp-In-T-REx-293 cells assessed as increase in Gq-mediated calcium flux by Fluo-4 direct dye based FLIPR Tetra assay | ec50 | 0.0005 | uM |
| (9R)-5-bromo-N,N-diethyl-7-methyl-4-(111C)methyl-6,6a,8,9-tetrahydroindolo[4,3-fg]quinoline-9-carboxamide | 1855061: Binding affinity to cerebrum 5-HT2 receptor (unknown origin) | ki | 0.0005 | uM |
| 2-[2,5-dimethoxy-4-(trifluoromethylsulfanyl)phenyl]ethanamine;hydrochloride | 2104577: Displacement of [3H]DOI from human 5-HT2C receptor expressed in HEK293 cell membrane incubated for 90 mins by microbeta liquid scintillation counting method | ki | 0.0005 | uM |
| N-[6-[(2-chloro-3-pyridinyl)oxy]-3-pyridinyl]-1H-indole-3-carboxamide | 340645: Displacement of [3H]mesulergine at human cloned 5HT2C receptor expressed in CHOK1 cell | ic50 | 0.0005 | uM |
| benzyl N-[[(6aR,9S,10aR)-4,7-dimethyl-6,6a,8,9,10,10a-hexahydroindolo[4,3-fg]quinolin-9-yl]methyl]carbamate | 4747: Evaluated for the binding affinity to porcine choroid plexus at 5-hydroxytryptamine 2C receptor binding site by using [3H]-MES as a radioligand. | ki | 0.0005 | uM |
| N-(3-fluoro-4-methyl-5-pyridin-3-ylphenyl)-5-methoxy-6-(trifluoromethyl)-2,3-dihydroindole-1-carboxamide | 5656: Binding affinity towards human cloned 5-hydroxytryptamine receptor 2C in HEK293 cells, using [3H]mesulergine as radioligand. | ki | 0.0006 | uM |
| 5-methoxy-N-[3-(4-methyl-3-pyridinyl)phenyl]-6-(trifluoromethyl)-2,3-dihydroindole-1-carboxamide | 5656: Binding affinity towards human cloned 5-hydroxytryptamine receptor 2C in HEK293 cells, using [3H]mesulergine as radioligand. | ki | 0.0006 | uM |
| N-(3-ethyl-5-pyridin-3-ylphenyl)-5-methoxy-6-(trifluoromethyl)-2,3-dihydroindole-1-carboxamide | 5656: Binding affinity towards human cloned 5-hydroxytryptamine receptor 2C in HEK293 cells, using [3H]mesulergine as radioligand. | ki | 0.0006 | uM |
| 5-methoxy-N-(5-pyridin-4-yl-3-pyridinyl)-6-(trifluoromethyl)-2,3-dihydroindole-1-carboxamide | 5656: Binding affinity towards human cloned 5-hydroxytryptamine receptor 2C in HEK293 cells, using [3H]mesulergine as radioligand. | ki | 0.0006 | uM |
| N-[4-chloro-3-(4-methyl-3-pyridinyl)phenyl]-5-methoxy-6-(trifluoromethyl)-2,3-dihydroindole-1-carboxamide | 5656: Binding affinity towards human cloned 5-hydroxytryptamine receptor 2C in HEK293 cells, using [3H]mesulergine as radioligand. | ki | 0.0006 | uM |
| 5-methoxy-N-[6-[(2-methyl-3-pyridinyl)oxy]-3-pyridinyl]-6-(trifluoromethyl)-2,3-dihydroindole-1-carboxamide | 5656: Binding affinity towards human cloned 5-hydroxytryptamine receptor 2C in HEK293 cells, using [3H]mesulergine as radioligand. | ki | 0.0006 | uM |
CTD chemical–gene interactions
46 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Clozapine | affects binding, affects response to substance | 5 |
| Olanzapine | affects response to substance, increases response to substance, affects binding | 4 |
| Valproic Acid | affects expression, decreases expression, increases expression | 4 |
| Aflatoxin B1 | increases methylation, affects expression, decreases methylation | 3 |
| mesulergine | affects binding, decreases reaction | 2 |
| Calcitriol | increases expression, affects cotreatment | 2 |
| Phenylmercuric Acetate | affects cotreatment, decreases expression | 2 |
| Risperidone | affects reaction, increases expression, affects response to substance, increases response to substance | 2 |
| bisphenol A | increases methylation | 1 |
| trichostatin A | increases expression | 1 |
| arsenite | increases methylation | 1 |
| 4-iodo-2,5-dimethoxyphenylisopropylamine | affects binding, decreases reaction | 1 |
| norfluoxetine | affects binding | 1 |
| nefazodone | affects binding | 1 |
| sarpogrelate | affects binding | 1 |
| agomelatine | affects binding | 1 |
| SB 206553 | increases expression | 1 |
| 6-chloro-5-methyl-1-((2-(2-methylpyrid-3-yloxy)pyrid-5-yl)carbamoyl)indoline | decreases reaction, increases expression | 1 |
| entinostat | increases expression | 1 |
| SB 243213 | affects binding, decreases activity | 1 |
| 7-methyl-6,7,8,9,14,15-hexahydro-5H-benz(d)indolo(2,3-g)azecine | affects binding | 1 |
| bardoxolone methyl | decreases activity | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, decreases expression | 1 |
| dorsomorphin | affects cotreatment, decreases expression | 1 |
| 1-(8-bromobenzo(1,2-b;4,5-b’)difuran-4-yl)-2-aminopropane | affects binding, decreases reaction | 1 |
| Aripiprazole | affects activity, affects binding | 1 |
| Vorinostat | decreases expression | 1 |
| Mirtazapine | affects binding, decreases reaction, increases expression, affects activity | 1 |
| Amitriptyline | affects binding | 1 |
| Benzo(a)pyrene | affects methylation | 1 |
ChEMBL screening assays
1235 unique, capped per target: 928 binding, 290 functional, 14 admet, 2 unclassified, 1 toxicity
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5109939 | Binding | Binding affinity to cerebrum 5-HT2 receptor (unknown origin) | Positron Emission Tomography (PET) Imaging Tracers for Serotonin Receptors. — J Med Chem |
| CHEMBL859802 | Functional | Lowering of intraocular pressure in lasered cynomolgus monkey after 1 hr at 250 ug | 1-((S)-2-aminopropyl)-1H-indazol-6-ol: a potent peripherally acting 5-HT2 receptor agonist with ocular hypotensive activity. — J Med Chem |
| CHEMBL4013769 | Unclassified | Selectivity ratio of EC50 for human 5HT2A receptor to EC50 for human 5HT2C-INI receptor | Discovery of N-Substituted (2-Phenylcyclopropyl)methylamines as Functionally Selective Serotonin 2C Receptor Agonists for Potential Use as Antipsychotic Medications. — J Med Chem |
Cellosaurus cell lines
10 cell lines: 6 cancer cell line, 3 spontaneously immortalized cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_H381 | CHO-K1/5-HT2C | Spontaneously immortalized cell line | Female |
| CVCL_H513 | HEK293/5-HT2C | Transformed cell line | Female |
| CVCL_LA57 | PathHunter U2OS HTR2C Activated GPCR Internalization | Cancer cell line | Female |
| CVCL_LA58 | PathHunter U2OS HTR2C beta-arrestin | Cancer cell line | Female |
| CVCL_LA59 | PathHunter U2OS HTR2C(VGV) beta-arrestin | Cancer cell line | Female |
| CVCL_LA60 | PathHunter U2OS HTR2C(VNV) beta-arrestin | Cancer cell line | Female |
| CVCL_LA61 | PathHunter U2OS HTR2C(VSV) beta-arrestin | Cancer cell line | Female |
| CVCL_RQ11 | CHO-K1 (+Galpha16) AequoScreen HTR2C (ne) | Spontaneously immortalized cell line | Female |
| CVCL_YK51 | U2OS HTR2C HiTSeeker | Cancer cell line | Female |
| CVCL_ZJ76 | GeneBLAzer HTR2C-NFAT-bla CHO-K1 | Spontaneously immortalized cell line | Female |
Clinical trials (associated diseases)
600 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00076362 | PHASE4 | COMPLETED | Pediatric Hypothalamic Obesity |
| NCT00079547 | PHASE4 | COMPLETED | The Safety and Effectiveness of Low and High Carbohydrate Diets |
| NCT00115063 | PHASE4 | TERMINATED | LOSS- Louisiana Obese Subjects Study |
| NCT00134303 | PHASE4 | COMPLETED | Trial Comparing Metformin Versus Placebo in Non Alcoholic Steatohepatitis (NASH) Patients Receiving Bariatric Surgery for Obesity |
| NCT00143936 | PHASE4 | COMPLETED | The Safety and Efficacy of Low and High Carbohydrate Diets |
| NCT00143962 | PHASE4 | COMPLETED | Comparison of Two Approaches to Weight Loss Follow-Up Study |
| NCT00152360 | PHASE4 | COMPLETED | The Effect of Xenical on Weight and Risk Factors |
| NCT00176306 | PHASE4 | COMPLETED | Levofloxacin Pharmacokinetics (PK) in the Severely Obese |
| NCT00203450 | PHASE4 | COMPLETED | Zonegran for the Treatment of Weight Gain Associated With Psychotropic Medication Use: A Placebo-Controlled Trial |
| NCT00205504 | PHASE4 | COMPLETED | Oral Contraceptives in the Metabolic Syndrome |
| NCT00229229 | PHASE4 | TERMINATED | Comparison of 4 Diets in the Management of Overweight Patients With Vascular Disease |
| NCT00234988 | PHASE4 | COMPLETED | A Phase IV, Multi-Center, Open-Label Trial of Sibutramine in Combination With a Hypocaloric Diet in Obese and Overweight Thai Subjects. |
| NCT00264589 | PHASE4 | COMPLETED | Exercise Training and Cardiovascular Function in Obesity and in Type 2 Diabetes |
| NCT00288873 | PHASE4 | COMPLETED | Characterization of Hyperparathyroidism and Vitamin D Deficiency in Obesity |
| NCT00298857 | PHASE4 | TERMINATED | A Pharmacokinetic Study to Compare the Dosing of Valproic Acid in Subjects With Different Body Weights |
| NCT00315146 | PHASE4 | COMPLETED | Optimizing Body Composition for Function in Older Adults |
| NCT00319202 | PHASE4 | TERMINATED | Clinical Trial to Assess the Effects of Candesartan on the Carbohydrate Metabolism of Obese Subjects |
| NCT00327912 | PHASE4 | UNKNOWN | Laparoscopic Roux-en-Y Gastric Bypass Versus Laparoscopic Biliopancreatic Diversion (BPD)- Duodenal Switch for Superobesity |
| NCT00352287 | PHASE4 | COMPLETED | Study to Determine the Effects of Human Growth Hormone and Pioglitazone in Overweight, Prediabetic Adults |
| NCT00353054 | PHASE4 | COMPLETED | Effect of Calcium/Vitamin D Supplementation on Body Weight and Fat Loss. |
| NCT00390637 | PHASE4 | COMPLETED | Diet, Obesity and Genes (DiOGenes) |
| NCT00415688 | PHASE4 | COMPLETED | Lifestyle Modification for Obesity-Related Type 2 Diabetes |
| NCT00433641 | PHASE4 | COMPLETED | Weight Loss in Response to Sibutramine (MERIDIA) is Influenced by the Inherited Genes |
| NCT00440375 | PHASE4 | COMPLETED | Effects of Rosiglitazone on Bone in Postmenopausal Diabetic Women |
| NCT00453557 | PHASE4 | COMPLETED | Mechanism of Growth Hormone Effects on Adipose Tissue |
| NCT00456885 | PHASE4 | COMPLETED | The Effect of Exenatide on Weight and Hunger in Obese, Healthy Women |
| NCT00463112 | PHASE4 | COMPLETED | Effect of Diet Plus Sibutramine on Hormonal and Metabolic Features in Overweight and Obese Women With PCOS |
| NCT00512187 | PHASE4 | COMPLETED | Moderate Weight Loss Makes Obese Patients With Severe Chronic Plaque Psoriasis Responsive to Sub-Optimal Dose of Cyclosporine: an Investigator Blinded, Controlled, Randomized Clinical Trial |
| NCT00516919 | PHASE4 | COMPLETED | Study of Behavioral Weight Loss Therapy for Obesity and Binge Eating in Monolingual Hispanic Persons |
| NCT00522470 | PHASE4 | COMPLETED | Effects of Rosiglitazone on Serum Ghrelin and Peptide YY Levels |
| NCT00537810 | PHASE4 | COMPLETED | Treatment of Binge Eating in Obese Patients in Primary Care |
| NCT00538486 | PHASE4 | COMPLETED | A Randomized, Double-Blind, Active Control Trial Comparing Effects of Telmisartan, Candesartan and Amlodipine, Alone or Plus Metformin, on Non-Diabetic, Obese Hypertensive Patients |
| NCT00584389 | PHASE4 | TERMINATED | The Effect of Rimonabant on Energy Expenditure, Fat Metabolism and Body Composition |
| NCT00585182 | PHASE4 | COMPLETED | Study to Evaluate Weight-based Enoxaparin Dosing in Obese Medical Patients at Risk for DVT |
| NCT00632840 | PHASE4 | COMPLETED | Pharmacological Regulation of Fat Transport in Metabolic Syndrome |
| NCT00636142 | PHASE4 | COMPLETED | Effects of Infliximab on Insulin Sensitivity and Beta Cell Function in Insulin Resistant Human Obesity |
| NCT00675987 | PHASE4 | COMPLETED | A Randomized Clinical Trial To Study Losartan On Endothelial Dysfunction and Insulin Resistance In Obese Patients |
| NCT00694811 | PHASE4 | COMPLETED | Effects of Re-Feeding Duration on Weight Maintenance After Weight Loss With Very-Low-Energy Diets (VLEDs) |
| NCT00699413 | PHASE4 | TERMINATED | Supplements for Controlling Resistance to Insulin |
| NCT00729963 | PHASE4 | COMPLETED | Sibutramine Versus Continuous Positive Airway Pressure (CPAP)in Obstructive Sleep Apnea (OSA) Patients |
Related Atlas pages
- Associated diseases: obesity disorder
- Targeted by drugs: 2,2’-DITHIODIETHANESULFONIC ACID, Agomelatine, Amitriptyline, Amoxapine, Apomorphine, Aripiprazole, Bromocriptine, Cabergoline, Chlorpromazine, Clozapine, Duloxetine, Ergotamine, Fluoxetine, Idalopirdine, Lisuride, Lorcaserin, Loxapine, Mesoridazine, Methylergonovine, Methysergide, Mianserin, Mirtazapine, Olanzapine, Oxymetazoline, Pergolide, Perphenazine, Piperazine, Psilocybin, Risperidone, Sarpogrelate, Serotonin, Sertindole, Thioridazine, Trazodone, Trifluoperazine, Volinanserin, Xanomeline, Ziprasidone
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): obesity disorder