HTR3E-AS1

Summary

HTR3E-AS1 (HTR3E antisense RNA 1, HGNC:41032) is a long non-coding RNA gene on chromosome 3q27.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41032
Approved symbol	HTR3E-AS1
Name	HTR3E antisense RNA 1
Location	3q27.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000238020
Ensembl biotype	lncRNA
Entrez	106478970
RNAcentral	URS0000317D0A — lncRNA, 515 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000431427

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000431427 — 3 exons

Exon	Start	End
ENSE00001624152	184105126	184105178
ENSE00001779724	184095118	184095350
ENSE00001782093	184104160	184104388

Expression profiles

Bgee: expression breadth ubiquitous, 108 present calls, max score 66.07.

Top tissues by expression

108 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
stromal cell of endometrium	CL:0002255	66.07	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	61.37	gold quality
leukocyte	CL:0000738	58.36	gold quality
duodenum	UBERON:0002114	57.45	gold quality
monocyte	CL:0000576	56.84	gold quality
primary visual cortex	UBERON:0002436	56.60	gold quality
lymph node	UBERON:0000029	55.42	gold quality
bone marrow	UBERON:0002371	55.38	silver quality
blood	UBERON:0000178	52.94	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	52.49	gold quality
islet of Langerhans	UBERON:0000006	51.83	gold quality
prefrontal cortex	UBERON:0000451	51.80	gold quality
vermiform appendix	UBERON:0001154	51.59	gold quality
liver	UBERON:0002107	50.33	gold quality
muscle of leg	UBERON:0001383	48.51	silver quality
gastrocnemius	UBERON:0001388	48.41	silver quality
thoracic mammary gland	UBERON:0005200	48.08	gold quality
right lobe of liver	UBERON:0001114	48.04	silver quality
superior frontal gyrus	UBERON:0002661	47.97	gold quality
pancreas	UBERON:0001264	47.90	gold quality
adrenal tissue	UBERON:0018303	47.56	silver quality
left adrenal gland cortex	UBERON:0035825	47.43	gold quality
cortex of kidney	UBERON:0001225	47.38	silver quality
right adrenal gland cortex	UBERON:0035827	46.88	gold quality
smooth muscle tissue	UBERON:0001135	46.86	gold quality
body of pancreas	UBERON:0001150	46.53	silver quality
transverse colon	UBERON:0001157	46.39	gold quality
myometrium	UBERON:0001296	46.37	gold quality
heart left ventricle	UBERON:0002084	46.07	gold quality
colon	UBERON:0001155	45.89	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.