HTR4
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Also known as 5-HT4
Summary
HTR4 (5-hydroxytryptamine receptor 4, HGNC:5299) is a protein-coding gene on chromosome 5q32, encoding 5-hydroxytryptamine receptor 4 (Q13639). G-protein coupled receptor for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone and a mitogen.
This gene is a member of the family of serotonin receptors, which are G protein coupled receptors that stimulate cAMP production in response to serotonin (5-hydroxytryptamine). The gene product is a glycosylated transmembrane protein that functions in both the peripheral and central nervous system to modulate the release of various neurotransmitters. Multiple transcript variants encoding proteins with distinct C-terminal sequences have been described.
Source: NCBI Gene 3360 — RefSeq curated summary.
At a glance
- GWAS associations: 23
- Clinical variants (ClinVar): 63 total
- Druggable target: yes — 17 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_000870
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:5299 |
| Approved symbol | HTR4 |
| Name | 5-hydroxytryptamine receptor 4 |
| Location | 5q32 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | 5-HT4 |
| Ensembl gene | ENSG00000164270 |
| Ensembl biotype | protein_coding |
| OMIM | 602164 |
| Entrez | 3360 |
Gene structure
Transcript identifiers
Ensembl transcripts: 12 — 8 protein_coding, 2 nonsense_mediated_decay, 1 protein_coding_CDS_not_defined, 1 retained_intron
ENST00000360693, ENST00000377888, ENST00000517929, ENST00000519495, ENST00000520086, ENST00000520514, ENST00000521124, ENST00000521530, ENST00000521735, ENST00000522588, ENST00000524063, ENST00000887163
RefSeq mRNA: 6 — MANE Select: NM_000870
NM_000870, NM_001040169, NM_001040172, NM_001040173, NM_001286410, NM_199453
CCDS: CCDS34270, CCDS34271, CCDS34272, CCDS34273, CCDS4291, CCDS75353
Canonical transcript exons
ENST00000377888 — 7 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001082935 | 148509456 | 148510024 |
| ENSE00003494895 | 148523193 | 148523346 |
| ENSE00003593351 | 148550137 | 148550262 |
| ENSE00003593486 | 148548668 | 148548868 |
| ENSE00003597593 | 148636989 | 148637061 |
| ENSE00003900844 | 148481547 | 148483293 |
| ENSE00003997493 | 148654062 | 148654527 |
Expression profiles
Bgee: expression breadth ubiquitous, 244 present calls, max score 91.41.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.2601 / max 25.9807, expressed in 79 samples.
FANTOM5 promoters (6 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 64114 | 0.4339 | 199 |
| 64100 | 0.1596 | 53 |
| 64102 | 0.0494 | 25 |
| 64101 | 0.0402 | 19 |
| 64104 | 0.0069 | 2 |
| 64103 | 0.0040 | 2 |
Top tissues by expression
278 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| type B pancreatic cell | CL:0000169 | 91.41 | silver quality |
| triceps brachii | UBERON:0001509 | 91.40 | gold quality |
| olfactory bulb | UBERON:0002264 | 91.28 | gold quality |
| diaphragm | UBERON:0001103 | 90.92 | gold quality |
| gluteal muscle | UBERON:0002000 | 90.67 | silver quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 89.68 | silver quality |
| tongue squamous epithelium | UBERON:0006919 | 89.68 | gold quality |
| lateral globus pallidus | UBERON:0002476 | 88.95 | gold quality |
| vena cava | UBERON:0004087 | 85.78 | silver quality |
| vastus lateralis | UBERON:0001379 | 85.77 | silver quality |
| quadriceps femoris | UBERON:0001377 | 85.29 | silver quality |
| substantia nigra pars reticulata | UBERON:0001966 | 84.92 | gold quality |
| substantia nigra pars compacta | UBERON:0001965 | 84.77 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 84.17 | silver quality |
| gingival epithelium | UBERON:0001949 | 84.09 | silver quality |
| body of tongue | UBERON:0011876 | 83.68 | silver quality |
| lateral nuclear group of thalamus | UBERON:0002736 | 83.50 | silver quality |
| skeletal muscle tissue of biceps brachii | UBERON:0004502 | 82.92 | gold quality |
| biceps brachii | UBERON:0001507 | 82.68 | gold quality |
| nasal cavity epithelium | UBERON:0005384 | 82.64 | silver quality |
| hair follicle | UBERON:0002073 | 82.30 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 81.87 | silver quality |
| upper arm skin | UBERON:0004263 | 81.50 | silver quality |
| myocardium | UBERON:0002349 | 81.32 | silver quality |
| subthalamic nucleus | UBERON:0001906 | 81.22 | gold quality |
| cervix squamous epithelium | UBERON:0006922 | 80.88 | silver quality |
| trabecular bone tissue | UBERON:0002483 | 80.54 | gold quality |
| tongue | UBERON:0001723 | 80.44 | gold quality |
| orbitofrontal cortex | UBERON:0004167 | 80.03 | silver quality |
| gingiva | UBERON:0001828 | 79.95 | silver quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 6.29 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
138 targeting HTR4, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-1193 | 100.00 | 65.93 | 529 |
| HSA-MIR-432-3P | 100.00 | 67.86 | 705 |
| HSA-MIR-4425 | 100.00 | 67.59 | 1049 |
| HSA-MIR-450A-1-3P | 100.00 | 69.33 | 1837 |
| HSA-MIR-6127 | 100.00 | 66.76 | 2188 |
| HSA-MIR-6133 | 100.00 | 66.48 | 2064 |
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-4510 | 100.00 | 66.60 | 2050 |
| HSA-MIR-6129 | 100.00 | 66.46 | 2080 |
| HSA-MIR-6130 | 100.00 | 66.69 | 2012 |
| HSA-MIR-196A-1-3P | 99.99 | 72.15 | 2772 |
| HSA-MIR-4500 | 99.99 | 72.72 | 2367 |
| HSA-MIR-103A-3P | 99.98 | 69.14 | 1595 |
| HSA-MIR-107 | 99.98 | 69.14 | 1595 |
| HSA-LET-7A-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7B-5P | 99.98 | 72.31 | 1790 |
| HSA-LET-7C-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7E-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7F-5P | 99.98 | 72.56 | 1784 |
| HSA-LET-7G-5P | 99.98 | 72.37 | 1784 |
| HSA-LET-7I-5P | 99.98 | 72.37 | 1788 |
| HSA-MIR-98-5P | 99.98 | 72.33 | 1787 |
| HSA-MIR-3688-3P | 99.97 | 72.02 | 2834 |
| HSA-LET-7D-5P | 99.96 | 71.76 | 1632 |
| HSA-MIR-4458 | 99.96 | 71.64 | 1650 |
| HSA-MIR-548AB | 99.95 | 71.31 | 3488 |
Literature-anchored findings (GeneRIF, showing 40)
- This paper presents an analysis of the SH3TC2 promoter after identifying a read-through transcript of the SH3TC2 and HTR4 loci. Available data suggests HTR4 is a separate locus with its own promoter, and not the product of a bi-cistronic transcript. (PMID:11716477)
- Computational model of the complex between GR113808 and the 5-HT4 receptor guided by site-directed mutagenesis and the crystal structure of rhodopsin. (PMID:11989623)
- The polymorphisms associated with mood disorder were located within the region that encodes the divergent C-terminal tails of the 5-HT(4) receptor. (PMID:12399948)
- report the activation of the extracellular signal-regulated kinases (ERKs) 1 and 2 (p44 and p42 MAP kinase) through the human serotonin receptors 5-HT(4(b)) and 5-HT(7(a)) (PMID:12446729)
- results show an overexpression of the 5-HT4 receptor in cisapride-responsive ACTH-independent bilateral macronodular adrenal hyperplasia (PMID:12519861)
- A highly significant association between schizophrenia and haplotype A-T (OR = 0.13 [0.03-0.58]) was detected. (PMID:12898568)
- Our results suggest a complex regulation of the h5-HT4 receptor gene expression involving distinct promoters and non-coding exons. (PMID:15575821)
- secretion of the non-amyloidogenic form of amyloid precursor protein, sAPPalpha induced by the 5-HT4(e) receptor isoform was not due to a general boost of the constitutive secretory pathway but rather to its specific effect on alpha-secretase activity (PMID:15710402)
- inhibition of Na+/H+ exchange activity by serotonin is mediated by 5-HT4 receptors in Caco-2 cells (PMID:15825078)
- coexpression of h5-HT4R and beta2-adrenergic receptor (beta2AR) led to their heterodimerization (PMID:15896782)
- the uncoupling and endocytosis of 5-HT4R require different GRK2 concentrations and involve distinct molecular events (PMID:15919661)
- development of an adenovirus expression system to examine the properties of two human 5-HT4 receptor splice variants, h5-HT4(b) and h5-HT4(d), expressed in adult cardiomyocytes devoid of native 5-HT4 receptors (PMID:15950987)
- These findings provide the first evidence of differential internalization between the two splice variants, 5-HT(4a) and 5-HT(4b) receptors. (PMID:16209130)
- We show overexpression & different splicing of 5-HT4 receptor in aldosterone-producing adenoma tissues in comparison with normal adrenocortical tissue.Isoforms (a) & (b) were not expressed in any APA but were present in majority of normal adrenal cortex. (PMID:16322401)
- These results suggest that the HTR4 gene may play a role in the genetic predisposition to ADHD. (PMID:16563621)
- Data show that 5-HT(4) receptor stimulation in primary neurons produced a potent but transient activation of the ERK pathway that is dependent on Src tyrosine kinase but totally independent of beta-arrestin. (PMID:17377064)
- We show that disulfide bridges between Cys112 and Cys145 located within transmembrane domain 3 and transmembrane domain 4, respectively, are of critical importance for 5-HT(4)R dimer formation. (PMID:17379184)
- Our results indicate that h5-HT(4(b)) is the dominant cardiac isoform of human 5-HT(4) receptors and its expression is increased in CAF. (PMID:17418812)
- Results describe regional differences in expression of TPH-1, SERT, 5-HT(3) and 5-HT(4) receptors in the stomach and duodenum. (PMID:17509016)
- Functional activiy of 5-HT4 receptors was studied in children with congenital heart disease. (PMID:17603679)
- In this review, the pathways regulating either beta- or gamma-secretase may be differentially controlled by 5-HT4 receptor isoforms. (PMID:18322379)
- In failing human ventricle, 5-HT(4) receptor-mediated positive inotropic response was regulated by PDEs in a manner similar to that in postinfarction rat hearts;5-HT, PDE3 and PDE4 may have pathophysiological functions in heart failure. (PMID:18846035)
- 5-HT4 expression is lower in heart ventricle vs. atrium. Isoform expression in atrium and ventricle is similar. There is a parallel increase of cAMP and in the phosphorylation state of regulatory proteins following stimulation with 5-HT in the atrium. (PMID:19002436)
- The human 5HT4 receptor, when placed under the influence of the mouse opsin promoter and an opsin rod outer segment (ROS) targeting sequence, localized to ROS of transgenic mouse retina. (PMID:19053287)
- No association was found in the family sample betweewn HTR4 and schizophrenia. (PMID:19892407)
- Data show expression of TNS1, GSTCD, AGER, HTR4 and THSD4 in lung tissue and indicate potential targets for interventions to alleviate respiratory disease. (PMID:20010834)
- This study demonistrated that 5-HT4 receptor is present in the human thalamus prenatally. (PMID:20538346)
- The relatively stable HT4 5- receptor binding with aging contrasts others in subtypes of receptors, which generally decrease with aging. (PMID:21364600)
- SNP and haplotypes of the HTR4 gene were associated with the asthma phenotype and genetic variation of HTR4 may affect susceptibility to the development of asthma. (PMID:21382128)
- 5-HT4 receptor binding was a positively correlated to amyloid beta (A4) burden and negatively to MMSE score of the Alzheimer disease patients (PMID:21673407)
- HTR4 polymorphism associated with COPD risk and lung function decline (PMID:21965014)
- The occurrence of heterogeneous post-translational modifications (PTMs) on transgenic proteins, as well as the complications that non-native PTMs can cause, highlight the characterization of both endogenous and heterologous protein targets. (PMID:22145929)
- Mucosal 5-HT(4) receptor activation can mediate the prokinetic and antinociceptive actions of 5-HT(4)R agonists. (PMID:22226658)
- staining pattern of serotonin receptors in ovary indicates functional role in ovarian physiology. In ovarian tumours, expression is in harmony with a tumour suppressor role in ovarian carcinogenesis, which is supported by observations in the literature (PMID:22493371)
- Our findings are consistent with a model wherein the 5-HTTLPR S allele is associated with relatively increased serotonin levels. (PMID:22584237)
- These findings suggest that the 5-HT(4)R is critically involved in reward circuits that regulate people’s food intake (PMID:22709820)
- Results suggest an important role for the CHRNA5/3 region as a genetic risk factor for airflow obstruction independent of smoking and implicate the HTR4 gene in the etiology of airflow obstruction. (PMID:22837378)
- Our results suggest that HTR4 polymorphisms may not play a major role in the susceptibility for suicidal behavior in subjects with schizophrenia. (PMID:22842674)
- These results suggest a prominent role of 5-HT(4)R in promoting angiogenesis. (PMID:22903372)
- This is the first transgenic model to study human 5-HTreceptor in the atrium ex vivo or in vivo. (PMID:23307014)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | htr4 | ENSDARG00000061940 |
| mus_musculus | Htr4 | ENSMUSG00000026322 |
| rattus_norvegicus | Htr4 | ENSRNOG00000019134 |
Paralogs (25): DRD4 (ENSG00000069696), HRH3 (ENSG00000101180), HRH2 (ENSG00000113749), CHRM3 (ENSG00000133019), HRH4 (ENSG00000134489), TAAR5 (ENSG00000135569), GPR84 (ENSG00000139572), GPR161 (ENSG00000143147), TAAR2 (ENSG00000146378), TAAR6 (ENSG00000146383), TAAR8 (ENSG00000146385), TAAR1 (ENSG00000146399), DRD3 (ENSG00000151577), CHRM1 (ENSG00000168539), DRD5 (ENSG00000169676), HTR1A (ENSG00000178394), HTR1D (ENSG00000179546), CHRM4 (ENSG00000180720), CHRM2 (ENSG00000181072), DRD1 (ENSG00000184845), CHRM5 (ENSG00000184984), GPR21 (ENSG00000188394), HRH1 (ENSG00000196639), GPR52 (ENSG00000203737), TAAR9 (ENSG00000237110)
Protein
Protein identifiers
5-hydroxytryptamine receptor 4 — Q13639 (reviewed: Q13639)
Alternative names: Serotonin receptor 4
All UniProt accessions (4): A0A2D3FAF9, Q13639, E5RHV8, E5RK45
UniProt curated annotations — full annotation on UniProt →
Function. G-protein coupled receptor for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone and a mitogen. Ligand binding causes a conformation change that triggers signaling via guanine nucleotide-binding proteins (G proteins) and modulates the activity of downstream effectors. HTR4 is coupled to G(s) G alpha proteins and mediates activation of adenylate cyclase activity.
Subunit / interactions. Interacts (via C-terminus 330-346 AA) with GRK5; this interaction is promoted by 5-HT (serotonin). Interacts with MAGI2, MPP3, NHERF1 and SNX27 isoforms 1 and 2. Forms a complex including NHERF1 and EZR. Interacts with PATJ, NOS1 and SEC23A.
Subcellular location. Cell membrane. Endosome membrane.
Tissue specificity. Expressed in ileum, brain, and atrium, but not in the ventricle. Mainly expressed in atria and cardiac ventricle. Expressed in all cardiovascular tissues analyzed.
Domain organisation. Specificity for G(s) G alpha proteins is determined by the length of transmembrane regions 5 and 6 (TM5 and TM6).
Similarity. Belongs to the G-protein coupled receptor 1 family.
Isoforms (9)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q13639-1 | 5-HT4(B) | yes |
| Q13639-2 | 5-HT4(A), 5-HT4S | |
| Q13639-3 | 5-HT4(C) | |
| Q13639-4 | 5-HT4(D) | |
| Q13639-5 | 5-HT4(E), H5-HT4(g) | |
| Q13639-6 | 5-HT4(F) | |
| Q13639-7 | 5-HT4(G) | |
| Q13639-8 | 5-HT4(I) | |
| Q13639-9 | 5-HT4c1 |
RefSeq proteins (6): NP_000861, NP_001035259, NP_001035262, NP_001035263, NP_001273339, NP_955525 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000276 | GPCR_Rhodpsn | Family |
| IPR001520 | 5HT4_rcpt | Family |
| IPR017452 | GPCR_Rhodpsn_7TM | Domain |
Pfam: PF00001
UniProt features (57 total): helix 14, mutagenesis site 10, topological domain 8, splice variant 8, transmembrane region 7, turn 3, binding site 2, sequence variant 2, chain 1, glycosylation site 1, disulfide bond 1
Structure
Experimental structures (PDB)
4 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 5EM9 | X-RAY DIFFRACTION | 1.6 |
| 7XT8 | ELECTRON MICROSCOPY | 3.1 |
| 7XT9 | ELECTRON MICROSCOPY | 3.2 |
| 7XTA | ELECTRON MICROSCOPY | 3.2 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q13639-F1 | 81.60 | 0.58 |
Antibody-complex structures (SAbDab): 2 — 7XT8, 7XTA
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (2): 100; 279
Disulfide bonds (1): 93–184
Glycosylation sites (1): 7
Mutagenesis-validated functional residues (10):
| Position | Phenotype |
|---|---|
| 100 | abolished g-protein coupled receptor activity. |
| 100 | in d3.32n mutant; abolihed binding to serotonin. |
| 104 | decreased g-protein coupled receptor activity. |
| 105 | abolished g-protein coupled receptor activity. |
| 186 | decreased g-protein coupled receptor activity. |
| 193 | decreased g-protein coupled receptor activity. |
| 197 | in s5.43a mutant; abolihed binding to serotonin. |
| 272 | abolished g-protein coupled receptor activity. |
| 275 | abolished g-protein coupled receptor activity. |
| 302 | in y7.43a mutant; abolihed binding to serotonin. abolished g-protein coupled receptor activity. |
Function
Pathways and Gene Ontology
Reactome pathways
8 pathways
| ID | Pathway |
|---|---|
| R-HSA-390666 | Serotonin receptors |
| R-HSA-418555 | G alpha (s) signalling events |
| R-HSA-162582 | Signal Transduction |
| R-HSA-372790 | Signaling by GPCR |
| R-HSA-373076 | Class A/1 (Rhodopsin-like receptors) |
| R-HSA-375280 | Amine ligand-binding receptors |
| R-HSA-388396 | GPCR downstream signalling |
| R-HSA-500792 | GPCR ligand binding |
MSigDB gene sets: 216 (showing top):
MORF_RAGE, GOBP_DIGESTION, MODULE_52, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, MORF_FLT1, GOMF_G_PROTEIN_COUPLED_SEROTONIN_RECEPTOR_ACTIVITY, YAGI_AML_WITH_INV_16_TRANSLOCATION, TGCTGCT_MIR15A_MIR16_MIR15B_MIR195_MIR424_MIR497, GOBP_SYNAPSE_ASSEMBLY, MODULE_45, MODULE_64, MORF_ATRX, ASTON_MAJOR_DEPRESSIVE_DISORDER_DN, GOBP_REGULATION_OF_CELL_JUNCTION_ASSEMBLY, MORF_ESR1
GO Biological Process (14): G protein-coupled receptor signaling pathway (GO:0007186), G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger (GO:0007187), adenylate cyclase-activating G protein-coupled receptor signaling pathway (GO:0007189), adenylate cyclase-activating serotonin receptor signaling pathway (GO:0007192), adenylate cyclase-inhibiting serotonin receptor signaling pathway (GO:0007198), chemical synaptic transmission (GO:0007268), maintenance of gastrointestinal epithelium (GO:0030277), regulation of appetite (GO:0032098), mucus secretion (GO:0070254), large intestinal transit (GO:0120056), regulation of postsynapse assembly (GO:0150052), system process (GO:0003008), signal transduction (GO:0007165), G protein-coupled serotonin receptor signaling pathway (GO:0098664)
GO Molecular Function (6): G protein-coupled serotonin receptor activity (GO:0004993), neurotransmitter receptor activity (GO:0030594), serotonin binding (GO:0051378), serotonin receptor activity (GO:0099589), G protein-coupled receptor activity (GO:0004930), protein binding (GO:0005515)
GO Cellular Component (9): cytoplasm (GO:0005737), plasma membrane (GO:0005886), endosome membrane (GO:0010008), membrane (GO:0016020), dendrite (GO:0030425), postsynapse (GO:0098794), glutamatergic synapse (GO:0098978), endosome (GO:0005768), synapse (GO:0045202)
Reactome top-level categories
Rollup of top-6 pathways:
| Category | Pathways |
|---|---|
| Signaling by GPCR | 2 |
| Amine ligand-binding receptors | 1 |
| GPCR downstream signalling | 1 |
| Signal Transduction | 1 |
| GPCR ligand binding | 1 |
| Class A/1 (Rhodopsin-like receptors) | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| G protein-coupled receptor signaling pathway | 3 |
| cellular anatomical structure | 3 |
| G protein-coupled serotonin receptor signaling pathway | 2 |
| transmembrane signaling receptor activity | 2 |
| synapse | 2 |
| G protein-coupled receptor activity | 1 |
| signal transduction | 1 |
| adenylate cyclase-modulating G protein-coupled receptor signaling pathway | 1 |
| adenylate cyclase activator activity | 1 |
| adenylate cyclase-activating G protein-coupled receptor signaling pathway | 1 |
| serotonin receptor signaling pathway | 1 |
| Gi/o-coupled serotonin receptor activity | 1 |
| adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway | 1 |
| anterograde trans-synaptic signaling | 1 |
| epithelial structure maintenance | 1 |
| digestive system process | 1 |
| response to nutrient levels | 1 |
| regulation of biological quality | 1 |
| body fluid secretion | 1 |
| secretion by tissue | 1 |
| intestinal motility | 1 |
| regulation of synapse assembly | 1 |
| postsynapse assembly | 1 |
| regulation of postsynapse organization | 1 |
| multicellular organismal process | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| G protein-coupled serotonin receptor activity | 1 |
| G protein-coupled amine receptor activity | 1 |
| serotonin binding | 1 |
| signaling receptor activity | 1 |
| cation binding | 1 |
| amine binding | 1 |
| heterocyclic compound binding | 1 |
| binding | 1 |
| intracellular anatomical structure | 1 |
| membrane | 1 |
Protein interactions and networks
STRING
402 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| HTR4 | GIPR | P48546 | 639 |
| HTR4 | GIP | P09681 | 569 |
| HTR4 | KCNH2 | Q12809 | 557 |
| HTR4 | OR52J3 | Q8NH60 | 497 |
| HTR4 | LRRC10 | Q5BKY1 | 462 |
| HTR4 | OR5B17 | Q8NGF7 | 433 |
| HTR4 | OR5B3 | Q8NH48 | 432 |
| HTR4 | NPR3 | P17342 | 419 |
| HTR4 | MLN | P12872 | 395 |
| HTR4 | POMC | P01189 | 391 |
| HTR4 | REN | P00797 | 387 |
| HTR4 | ITGB3 | P05106 | 372 |
| HTR4 | HTR3A | P46098 | 369 |
| HTR4 | AVPR1A | P37288 | 368 |
| HTR4 | CNGA4 | Q8IV77 | 363 |
IntAct
40 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| GPR37 | HTR4 | psi-mi:“MI:0915”(physical association) | 0.580 |
| GPR37 | HTR4 | psi-mi:“MI:2364”(proximity) | 0.580 |
| GPR37 | HTR4 | psi-mi:“MI:0403”(colocalization) | 0.580 |
| GPRIN2 | HTR4 | psi-mi:“MI:0915”(physical association) | 0.510 |
| HTR4 | HTR4 | psi-mi:“MI:2364”(proximity) | 0.470 |
| HTR4 | HTR4 | psi-mi:“MI:0915”(physical association) | 0.470 |
| HTR4 | psi-mi:“MI:0915”(physical association) | 0.400 | |
| RAMP1 | HTR4 | psi-mi:“MI:0915”(physical association) | 0.400 |
| RAMP2 | HTR4 | psi-mi:“MI:0915”(physical association) | 0.400 |
| HTR4 | RAMP2 | psi-mi:“MI:0915”(physical association) | 0.400 |
| HTR4 | RAMP3 | psi-mi:“MI:0915”(physical association) | 0.400 |
| RAMP3 | HTR4 | psi-mi:“MI:0915”(physical association) | 0.400 |
| HTR4 | RAMP1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| TMEM230 | HTR4 | psi-mi:“MI:0915”(physical association) | 0.370 |
| CD81 | HTR4 | psi-mi:“MI:0915”(physical association) | 0.370 |
| CLTB | HTR4 | psi-mi:“MI:0915”(physical association) | 0.370 |
| GDF1 | HTR4 | psi-mi:“MI:0915”(physical association) | 0.370 |
| GHITM | HTR4 | psi-mi:“MI:0915”(physical association) | 0.370 |
| ANO10 | HTR4 | psi-mi:“MI:0915”(physical association) | 0.370 |
| CERS1 | HTR4 | psi-mi:“MI:0915”(physical association) | 0.370 |
| MGLL | HTR4 | psi-mi:“MI:0915”(physical association) | 0.370 |
BioGRID (22): GPRIN2 (Affinity Capture-Western), GPR37 (Affinity Capture-Western), GPRIN2 (Co-localization), GPR37 (Co-localization), GPRIN2 (Two-hybrid), GPR37 (Two-hybrid), TMEM230 (Two-hybrid), CD81 (Two-hybrid), CLTB (Two-hybrid), GDF1 (Two-hybrid), GHITM (Two-hybrid), ANO10 (Two-hybrid), CERS1 (Two-hybrid), MGLL (Two-hybrid), ELOVL5 (Two-hybrid)
ESM2 similar proteins: A0A678XMK4, A6QLE7, G3M4F8, O08890, O42384, O42574, O70528, P07550, P0C5J4, P10608, P17124, P18762, P25021, P25102, P28221, P28222, P28334, P28564, P28565, P28566, P30939, P30940, P35404, P35406, P46636, P47747, P56496, P60020, P60021, P61752, P79748, P97288, Q02284, Q0EAB5, Q13639, Q28044, Q28509, Q588Y6, Q61224, Q62758
Diamond homologs: A0A678XMK4, O02662, O02666, O14804, O19091, O42574, O70528, O77680, O77700, P07700, P11617, P17124, P18089, P21728, P23944, P25021, P25100, P25102, P25115, P28221, P28565, P35405, P35406, P42289, P42290, P42291, P43141, P46626, P47747, P47800, P49145, P50406, P53452, P53454, P60021, P61752, P79400, P97288, P97292, P97714
SIGNOR signaling
10 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| HTR4 | “up-regulates activity” | GNAS | binding |
| HTR4 | “up-regulates activity” | GNAL | binding |
| HTR4 | “up-regulates activity” | GNAI1 | binding |
| HTR4 | “up-regulates activity” | GNAI3 | binding |
| HTR4 | “up-regulates activity” | GNAO1 | binding |
| HTR4 | “up-regulates activity” | GNAZ | binding |
| HTR4 | “up-regulates activity” | GNAQ | binding |
| HTR4 | “up-regulates activity” | GNA14 | binding |
| serotonin(1+) | “up-regulates activity” | HTR4 | “chemical activation” |
| serotonin | “up-regulates activity” | HTR4 | “chemical activation” |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 21 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| calcium ion transport | 5 | 45.3× | 1e-05 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
63 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 52 |
| Likely benign | 5 |
| Benign | 4 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1965 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 5:148548826:C:CT | acceptor_gain | 1.0000 |
| 5:148550131:GCTCA:G | donor_loss | 1.0000 |
| 5:148550132:CTCA:C | donor_loss | 1.0000 |
| 5:148550133:TCA:T | donor_loss | 1.0000 |
| 5:148550134:CA:C | donor_loss | 1.0000 |
| 5:148550136:C:CT | donor_loss | 1.0000 |
| 5:148550258:CAGAA:C | acceptor_gain | 1.0000 |
| 5:148550260:GAAC:G | acceptor_loss | 1.0000 |
| 5:148550262:ACT:A | acceptor_loss | 1.0000 |
| 5:148550263:C:CC | acceptor_gain | 1.0000 |
| 5:148550263:C:CG | acceptor_loss | 1.0000 |
| 5:148550264:T:C | acceptor_loss | 1.0000 |
| 5:148654061:C:CT | donor_loss | 1.0000 |
| 5:148654061:CCCG:C | donor_gain | 1.0000 |
| 5:148509451:CTCA:C | donor_loss | 0.9900 |
| 5:148509452:TCA:T | donor_loss | 0.9900 |
| 5:148509453:CACC:C | donor_loss | 0.9900 |
| 5:148509454:A:AC | donor_gain | 0.9900 |
| 5:148509455:C:CA | donor_loss | 0.9900 |
| 5:148509455:C:CC | donor_gain | 0.9900 |
| 5:148509971:C:CT | acceptor_gain | 0.9900 |
| 5:148510032:T:C | acceptor_gain | 0.9900 |
| 5:148510032:T:TC | acceptor_gain | 0.9900 |
| 5:148523184:GATAC:G | donor_loss | 0.9900 |
| 5:148523185:ATACT:A | donor_loss | 0.9900 |
| 5:148523186:TAC:T | donor_loss | 0.9900 |
| 5:148523187:ACTC:A | donor_loss | 0.9900 |
| 5:148523188:C:CG | donor_loss | 0.9900 |
| 5:148523189:TCACC:T | donor_loss | 0.9900 |
| 5:148523190:CACCA:C | donor_loss | 0.9900 |
AlphaMissense
2552 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 5:148509718:A:G | W272R | 1.000 |
| 5:148509718:A:T | W272R | 1.000 |
| 5:148509630:C:T | G301D | 0.999 |
| 5:148509637:A:G | W299R | 0.999 |
| 5:148509637:A:T | W299R | 0.999 |
| 5:148509704:A:C | F276L | 0.999 |
| 5:148509704:A:T | F276L | 0.999 |
| 5:148509706:A:G | F276L | 0.999 |
| 5:148509707:G:C | F275L | 0.999 |
| 5:148509707:G:T | F275L | 0.999 |
| 5:148509709:A:G | F275L | 0.999 |
| 5:148509711:G:C | P274R | 0.999 |
| 5:148509716:C:A | W272C | 0.999 |
| 5:148509716:C:G | W272C | 0.999 |
| 5:148509721:A:G | C271R | 0.999 |
| 5:148509728:G:C | F268L | 0.999 |
| 5:148509728:G:T | F268L | 0.999 |
| 5:148509730:A:G | F268L | 0.999 |
| 5:148509921:G:C | P204R | 0.999 |
| 5:148509921:G:T | P204Q | 0.999 |
| 5:148509929:G:C | F201L | 0.999 |
| 5:148509929:G:T | F201L | 0.999 |
| 5:148509931:A:G | F201L | 0.999 |
| 5:148523264:A:G | W146R | 0.999 |
| 5:148523264:A:T | W146R | 0.999 |
| 5:148548668:C:A | R118M | 0.999 |
| 5:148550178:G:C | N37K | 0.999 |
| 5:148550178:G:T | N37K | 0.999 |
| 5:148509575:A:C | F319L | 0.998 |
| 5:148509575:A:T | F319L | 0.998 |
dbSNP variants (sampled 300 via entrez): RS1000000263 (5:148481530 A>G), RS1000004399 (5:148452819 A>T), RS1000011599 (5:148492384 T>A), RS1000079867 (5:148622477 T>C), RS1000084690 (5:148483848 T>C), RS1000093875 (5:148499008 T>G), RS1000099746 (5:148567732 T>A,G), RS1000111497 (5:148544890 A>C), RS1000112089 (5:148535715 C>G,T), RS1000124042 (5:148561643 C>G), RS1000131562 (5:148488071 G>A), RS1000138970 (5:148536052 C>T), RS1000139377 (5:148640564 G>A), RS1000183328 (5:148631096 T>C), RS1000185381 (5:148545207 A>G)
Disease associations
OMIM: gene MIM:602164 | disease phenotypes:
GenCC curated gene-disease
Mondo (2): lung adenocarcinoma (MONDO:0005061), squamous cell carcinoma (MONDO:0005096)
Orphanet (1): NON RARE IN EUROPE: Adenocarcinoma of the lung (Orphanet:415268)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
23 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000542_7 | Pulmonary function | 1.000000e-11 |
| GCST000544_5 | Pulmonary function | 4.000000e-09 |
| GCST001588_14 | Periodontal microbiota | 2.000000e-06 |
| GCST001621_2 | Airflow obstruction | 4.000000e-09 |
| GCST001784_1 | Pulmonary function (smoking interaction) | 5.000000e-17 |
| GCST004147_10 | Chronic obstructive pulmonary disease | 5.000000e-26 |
| GCST004183_5 | Lung function (FEV1) | 2.000000e-11 |
| GCST004185_39 | Lung function (FEV1/FVC) | 8.000000e-23 |
| GCST007267_48 | Systolic blood pressure | 6.000000e-14 |
| GCST007268_72 | Diastolic blood pressure | 2.000000e-10 |
| GCST007429_11 | Lung function (FVC) | 6.000000e-06 |
| GCST007430_106 | Peak expiratory flow | 6.000000e-33 |
| GCST007431_100 | Lung function (FEV1/FVC) | 2.000000e-96 |
| GCST007432_165 | FEV1 | 7.000000e-47 |
| GCST007611_18 | Chronic obstructive pulmonary disease or high blood pressure (pleiotropy) | 1.000000e-13 |
| GCST007692_54 | Chronic obstructive pulmonary disease | 3.000000e-33 |
| GCST007941_26 | Medication use (adrenergics, inhalants) | 7.000000e-09 |
| GCST008357_10 | Mood instability | 1.000000e-08 |
| GCST008647_9 | Urinary sodium excretion | 9.000000e-12 |
| GCST008659_4 | Lung function in heavy smokers (low FEV1 vs high FEV1) | 5.000000e-09 |
| GCST008664_6 | Lung function (low FEV1 vs high FEV1) | 9.000000e-11 |
| GCST90002383_217 | Hematocrit | 1.000000e-09 |
| GCST90002384_116 | Hemoglobin | 3.000000e-09 |
EFO canonical traits (12, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0003892 | pulmonary function measurement |
| EFO:0004713 | FEV/FVC ratio |
| EFO:0004314 | forced expiratory volume |
| EFO:0006335 | systolic blood pressure |
| EFO:0006336 | diastolic blood pressure |
| EFO:0004312 | vital capacity |
| EFO:0009718 | peak expiratory flow |
| EFO:0009941 | Inhalant adrenergic use measurement |
| EFO:0008475 | mood instability measurement |
| EFO:0009282 | sodium measurement |
| EFO:0004348 | hematocrit |
| EFO:0004509 | hemoglobin measurement |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D002294 | Carcinoma, Squamous Cell | C04.557.470.200.400; C04.557.470.700.400 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL1875 (SINGLE PROTEIN), CHEMBL2096904 (PROTEIN FAMILY)
Molecules with ChEMBL bioactivity
17 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 318,182 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL117287 | PRUCALOPRIDE | 4 | 2,516 |
| CHEMBL1729 | CISAPRIDE | 4 | 14,365 |
| CHEMBL56564 | TROPISETRON | 4 | 19,312 |
| CHEMBL76370 | TEGASEROD | 4 | 4,580 |
| CHEMBL86 | METOCLOPRAMIDE | 4 | 37,825 |
| CHEMBL11 | IMIPRAMINE | 4 | 48,893 |
| CHEMBL39 | SEROTONIN | 3 | 186,160 |
| CHEMBL2087337 | VELUSETRAG | 2 | 107 |
| CHEMBL2402904 | FELCISETRAG | 2 | 158 |
| CHEMBL3306918 | PRX-03140 | 2 | 147 |
| CHEMBL356359 | PIBOSEROD | 2 | 316 |
| CHEMBL471036 | LITOXETINE | 2 | 2,122 |
| CHEMBL7257 | MEBUFOTENIN | 2 | 1,595 |
| CHEMBL2152922 | PF-04995274 | 1 | 23 |
| CHEMBL2179582 | PF-03382792 | 1 | |
| CHEMBL3950712 | DA-6886 | 1 | 11 |
| CHEMBL4297327 | SUVN-D4010 | 1 | 52 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
4 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs1971431 | HTR4 | 0.00 | 0 | ||
| rs4264931 | HTR4 | 0.00 | 0 | ||
| rs2068190 | HTR4 | 0.00 | 0 | ||
| rs1862342 | HTR4 | 0.00 | 0 |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: gpcr — 5-Hydroxytryptamine receptors
Most potent curated ligand interactions (42 total), top 25:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| RS 100235 | Antagonist | 12.2 | pKi |
| GR 125487 | Antagonist | 10.7 | pKi |
| SB 204070 | Antagonist | 10.41 | pKi |
| piboserod | Antagonist | 10.4 | pKi |
| GR 113808 | Antagonist | 10.3 | pKi |
| SB 207710 | Antagonist | 10.3 | pKi |
| [3H]GR 113808 | Antagonist | 10.3 | pKd |
| [123I]SB 207710 | Antagonist | 10.07 | pKd |
| ML 10375 | Antagonist | 10.0 | pKi |
| PF-04995274 | Partial agonist | 9.82 | pKi |
| [3H]RS 57639 | Antagonist | 9.7 | pKd |
| RS 116 0086 | Inverse agonist | 9.5 | pKi |
| TD-8954 | Agonist | 9.4 | pKi |
| RO 116 1148 | Inverse agonist | 9.3 | pKi |
| capeserod | Partial agonist | 9.2 | pKi |
| ML 10302 | Partial agonist | 9.0 | pKi |
| RS 57639 | Partial agonist | 8.9 | pKi |
| SB 203186 | Antagonist | 8.9 | pKi |
| RS67506 | Agonist | 8.8 | pEC50 |
| RS 67333 | Partial agonist | 8.7 | pKi |
| RS 39604 | Antagonist | 8.7 | pKi |
| [11C]SB207145 | Antagonist | 8.6 | pKd |
| prucalopride | Partial agonist | 8.6 | pKi |
| tegaserod | Partial agonist | 8.4 | pKi |
| BIMU 1 | Full agonist | 8.4 | pKi |
Binding affinities (BindingDB)
137 measured of 143 human assays (154 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| 4-amino-5-chloro-N-[[2-(1H-indol-3-ylmethyl)piperidin-4-yl]methyl]-2-methoxybenzamide | IC50 | 0.002 nM | US-9221790: Benzamide derivatives |
| 4-amino-5-chloro-N-[[1-(5-indol-1-ylpentyl)piperidin-4-yl]methyl]-2-methoxybenzamide | IC50 | 0.005 nM | US-9221790: Benzamide derivatives |
| 4-amino-5-chloro-N-[[1-(3-indol-1-ylpropyl)piperidin-4-yl]methyl]-2-methoxybenzamide | IC50 | 0.039 nM | US-9221790: Benzamide derivatives |
| SB207710 | KI | 0.05 nM | |
| 4-amino-5-chloro-2-methoxy-N-[[1-[3-(triazol-1-yl)propyl]piperidin-4-yl]methyl]benzamide | IC50 | 0.067 nM | US-9221790: Benzamide derivatives |
| 4-amino-5-chloro-2-methoxy-N-[[1-[(1-methylindol-3-yl)methyl]piperidin-4-yl]methyl]benzamide | IC50 | 0.076 nM | US-9221790: Benzamide derivatives |
| 4-amino-5-chloro-2-methoxy-N-[[1-[5-(triazol-1-yl)pentyl]piperidin-4-yl]methyl]benzamide | IC50 | 0.103 nM | US-9221790: Benzamide derivatives |
| 4-amino-5-chloro-N-[[1-[(4-fluorophenyl)methyl]piperidin-4-yl]methyl]-2-methoxybenzamide | IC50 | 0.134 nM | US-9221790: Benzamide derivatives |
| 4-amino-5-chloro-2-methoxy-N-[[1-[3-(tetrazol-1-yl)propyl]piperidin-4-yl]methyl]benzamide | IC50 | 0.164 nM | US-9221790: Benzamide derivatives |
| 4-amino-5-chloro-2-methoxy-N-[[1-[3-(triazol-2-yl)propyl]piperidin-4-yl]methyl]benzamide | IC50 | 0.182 nM | US-9221790: Benzamide derivatives |
| 4-amino-5-chloro-2-methoxy-N-[[1-[3-(1,2,4-triazol-1-yl)propyl]piperidin-4-yl]methyl]benzamide | IC50 | 0.226 nM | US-9221790: Benzamide derivatives |
| 4-amino-5-chloro-2-methoxy-N-[[1-[3-(2-methylimidazol-1-yl)propyl]piperidin-4-yl]methyl]benzamide | IC50 | 0.229 nM | US-9221790: Benzamide derivatives |
| 4-amino-5-chloro-2-methoxy-N-[[1-(pyridin-3-ylmethyl)piperidin-4-yl]methyl]benzamide | IC50 | 0.267 nM | US-9221790: Benzamide derivatives |
| 4-amino-5-chloro-N-[[1-[(4-hydroxyphenyl)methyl]piperidin-4-yl]methyl]-2-methoxybenzamide | IC50 | 0.375 nM | US-9221790: Benzamide derivatives |
| ML10375 | KI | 0.41 nM | |
| 4-amino-5-chloro-2-methoxy-N-[[1-[(1-methylpyrrol-2-yl)methyl]piperidin-4-yl]methyl]benzamide | IC50 | 0.421 nM | US-9221790: Benzamide derivatives |
| 4-amino-5-chloro-N-[[1-(1H-imidazol-2-ylmethyl)piperidin-4-yl]methyl]-2-methoxybenzamide | IC50 | 0.454 nM | US-9221790: Benzamide derivatives |
| CHEMBL2059582 | KI | 0.794 nM | |
| [1-(cyclohexylmethyl)piperidin-4-yl]methyl 4-amino-5-chloro-2-methoxybenzoate | KI | 0.9 nM | US-9663465: Acetylcholinesterase inhibitors and promnesiant serotonin 5-HT4 receptor agonists, their methods of preparation and the pharmaceutical compositions containing the same |
| CHEMBL2059578 | KI | 1 nM | |
| CHEMBL2059580 | KI | 1 nM | |
| 14C-5-hydroxy tryptamine creatinine disulfate | KI | 1.2 nM | |
| 6-Chloro-8-[5-(1-cyclobutyl-piperidin-4-yl)-[1,3,4]oxadiazol-2-yl]-chroman-5-ylamine | EC50 | 1.3 nM | US-9636335: Heteroaryl compounds as 5-HT4 receptor ligands |
| CAS_135938-17-9 | KI | 1.3 nM | |
| CHEMBL2059584 | KI | 1.58 nM | |
| CHEMBL3329226 | KI | 1.6 nM | |
| ML10302 scaffold, 9{b;w} | KI | 2 nM | |
| CHEMBL2059577 | KI | 2 nM | |
| 6-Chloro-8-[5-(1-cyclopentyl-piperidin-4-yl)-[1,3,4]oxadiazol-2-yl]-chroman-5-ylamine | EC50 | 2.3 nM | US-9636335: Heteroaryl compounds as 5-HT4 receptor ligands |
| 4-amino-5-chloro-[[1-(cyclohexylmethyl)-4-piperidyl]methyl]-2-methoxybenzamide | KI | 2.3 nM | US-9663465: Acetylcholinesterase inhibitors and promnesiant serotonin 5-HT4 receptor agonists, their methods of preparation and the pharmaceutical compositions containing the same |
| 6-Chloro-8-{5-[1-(3-methyl-butyl)-piperidin-4-yl]-[1,3,4]oxadiazol-2-yl}-chroman-5-ylamine | EC50 | 2.4 nM | US-9636335: Heteroaryl compounds as 5-HT4 receptor ligands |
| 1-(4-amino-5-chloro-2-methoxyphenyl)-3-[1-[(piperidin-4-yl)methyl]-4-piperidyl] propan-1-one | KI | 2.5 nM | US-9663465: Acetylcholinesterase inhibitors and promnesiant serotonin 5-HT4 receptor agonists, their methods of preparation and the pharmaceutical compositions containing the same |
| 1-[4-amino-5-chloro-2-(2-fluoroéthoxy)phenyl]-3-[1-(cyclohexylmethyl)-4-piperidyl]propan-1-one | KI | 2.5 nM | US-9663465: Acetylcholinesterase inhibitors and promnesiant serotonin 5-HT4 receptor agonists, their methods of preparation and the pharmaceutical compositions containing the same |
| CHEMBL2059583 | KI | 2.51 nM | |
| CHEMBL2059586 | KI | 2.51 nM | |
| CHEMBL2059588 | KI | 2.51 nM | |
| 1-(4-amino-5-chloro-2-methoxyphenyl)-3-[1-(cyclopentylmethyl)piperidin-4-yl]propan-1-one | KI | 3 nM | US-9663465: Acetylcholinesterase inhibitors and promnesiant serotonin 5-HT4 receptor agonists, their methods of preparation and the pharmaceutical compositions containing the same |
| 1-(4-amino-5-fluoro-2-methoxyphenyl)-3-[1-(cyclohexylmethyl)-4-piperidyl]propan-1-one | KI | 3.8 nM | US-9663465: Acetylcholinesterase inhibitors and promnesiant serotonin 5-HT4 receptor agonists, their methods of preparation and the pharmaceutical compositions containing the same |
| 1-(4-amino-5-chloro-2-methoxyphenyl)-3-[1-(cycloheptylmethyl)piperidin-4-yl]propan-1-one | KI | 3.9 nM | US-9663465: Acetylcholinesterase inhibitors and promnesiant serotonin 5-HT4 receptor agonists, their methods of preparation and the pharmaceutical compositions containing the same |
| CHEMBL2059579 | KI | 3.98 nM | |
| CHEMBL2059585 | KI | 3.98 nM | |
| CHEMBL2059581 | KI | 3.98 nM | |
| ML10302 scaffold, 9{a;y} | EC50 | 4 nM | |
| 6-Chloro-8-[5-(3-cyclobutyl-3-aza bicyclo[3.1.0]hex-6-yl)-[1,3,4]oxadiazol-2-yl]chroman-5-ylamine | EC50 | 4.2 nM | US-9636335: Heteroaryl compounds as 5-HT4 receptor ligands |
| ML10302 scaffold, 9{a;q} | KI | 5 nM | |
| 4-[5-(4-Amino-5-chloro-2,3-dihydro-benzofuran-7-yl)-[1,3,4]oxadiazol-2-yl]-[1,4′]bipiperidinyl-1′-carboxylicacid ethyl ester | EC50 | 5 nM | US-9636335: Heteroaryl compounds as 5-HT4 receptor ligands |
| 4-amino-5-bromo-N-[[1-(cyclohexylmethyl)-4-piperidyl]methyl]-2-methoxybenzamide | KI | 5.4 nM | US-9663465: Acetylcholinesterase inhibitors and promnesiant serotonin 5-HT4 receptor agonists, their methods of preparation and the pharmaceutical compositions containing the same |
| 6-Chloro-8-[5-(1-cyclobutylmethyl-piperidin-4-yl)-[1,3,4]oxadiazol-2-yl]-chroman-5-ylamine | EC50 | 5.7 nM | US-9636335: Heteroaryl compounds as 5-HT4 receptor ligands |
| 6-Chloro-8-{5-[1-(tetrahydro-pyran-4-yl)-piperidin-4-yl]-[1,3,4]oxadiazol-2-yl}-chroman-5-ylamine | EC50 | 5.7 nM | US-9636335: Heteroaryl compounds as 5-HT4 receptor ligands |
| 6-Chloro-8-[5-(1-cyclobutylmethyl-piperidin-4-yl)-[1,3,4]oxadiazol-2-yl]-2,3-dihydro-benzo[1,4]dioxin-5-ylamine | EC50 | 6.2 nM | US-9636335: Heteroaryl compounds as 5-HT4 receptor ligands |
ChEMBL bioactivities
1094 potent at pChembl≥5 of 1099 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 10.80 | Ki | 0.01585 | nM | CHEMBL180835 |
| 10.80 | Ki | 0.01585 | nM | CHEMBL68131 |
| 10.60 | Ki | 0.02512 | nM | CHEMBL361118 |
| 10.60 | Ki | 0.02512 | nM | CHEMBL181202 |
| 10.50 | Ki | 0.03162 | nM | CHEMBL367354 |
| 10.50 | Ki | 0.03162 | nM | CHEMBL181126 |
| 10.50 | Ki | 0.03162 | nM | CHEMBL182999 |
| 10.41 | IC50 | 0.039 | nM | CHEMBL3967117 |
| 10.40 | Ki | 0.03981 | nM | CHEMBL2181170 |
| 10.40 | Ki | 0.04 | nM | CHEMBL2181170 |
| 10.40 | Ki | 0.03981 | nM | CHEMBL33884 |
| 10.37 | Ki | 0.04266 | nM | CHEMBL1632165 |
| 10.30 | Ki | 0.05012 | nM | CHEMBL2440460 |
| 10.30 | Ki | 0.05012 | nM | CHEMBL424790 |
| 10.30 | Ki | 0.05012 | nM | CHEMBL180680 |
| 10.30 | Ki | 0.05012 | nM | CHEMBL3329805 |
| 10.28 | Ki | 0.05248 | nM | PIBOSEROD |
| 10.27 | Ki | 0.0537 | nM | CHEMBL1632163 |
| 10.20 | Ki | 0.0631 | nM | CHEMBL2440457 |
| 10.20 | Ki | 0.0631 | nM | CHEMBL180201 |
| 10.19 | Ki | 0.06457 | nM | CHEMBL1632169 |
| 10.17 | IC50 | 0.067 | nM | DA-6886 |
| 10.15 | EC50 | 0.07 | nM | CHEMBL6171570 |
| 10.13 | Ki | 0.07413 | nM | CHEMBL33884 |
| 10.12 | IC50 | 0.076 | nM | CHEMBL3934371 |
| 10.11 | Ki | 0.078 | nM | CHEMBL33884 |
| 10.10 | Ki | 0.07943 | nM | CHEMBL2177130 |
| 10.10 | Ki | 0.07943 | nM | CHEMBL360449 |
| 10.10 | Ki | 0.07943 | nM | CHEMBL3329814 |
| 10.00 | Ki | 0.1 | nM | CHEMBL2179697 |
| 10.00 | Ki | 0.1 | nM | PIBOSEROD |
| 10.00 | Ki | 0.1 | nM | CHEMBL180830 |
| 10.00 | Ki | 0.1 | nM | CHEMBL360245 |
| 10.00 | EC50 | 0.1 | nM | CHEMBL4215329 |
| 10.00 | Ki | 0.1 | nM | CHEMBL33884 |
| 9.99 | IC50 | 0.103 | nM | CHEMBL3926377 |
| 9.99 | Ki | 0.1023 | nM | CHEMBL1632157 |
| 9.97 | Ki | 0.1072 | nM | CHEMBL1632158 |
| 9.96 | Ki | 0.11 | nM | CHEMBL3093186 |
| 9.90 | Ki | 0.1259 | nM | CHEMBL2391994 |
| 9.90 | Ki | 0.1259 | nM | CHEMBL179833 |
| 9.90 | Ki | 0.1259 | nM | CHEMBL178285 |
| 9.90 | Ki | 0.1259 | nM | CHEMBL178669 |
| 9.87 | IC50 | 0.134 | nM | CHEMBL3890747 |
| 9.85 | Ki | 0.1413 | nM | CHEMBL1632167 |
| 9.82 | Ki | 0.15 | nM | PF-04995274 |
| 9.80 | Ki | 0.1585 | nM | CHEMBL2179699 |
| 9.80 | Ki | 0.1585 | nM | PIBOSEROD |
| 9.80 | Ki | 0.1585 | nM | CHEMBL181415 |
| 9.80 | Ki | 0.1585 | nM | CHEMBL180697 |
PubChem BioAssay actives
941 with measured affinity, of 2064 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| [1-[2-(methanesulfonamido)ethyl]piperidin-4-yl]methyl 1-methylindole-3-carboxylate | 754104: Displacement of [3H]GR113808 from human 5-HT4B receptor expressed in HEK293 cells after 1 hr by liquid scintillation counting analysis | ki | <0.0001 | uM |
| (1-butylpiperidin-4-yl)methyl 5-amino-6-chloro-2,3-dihydro-1,4-benzodioxine-8-carboxylate | 416400: Binding affinity at 5HT4 receptor | ki | <0.0001 | uM |
| N-[[1-[3-(4-butan-2-ylpiperazin-1-yl)sulfonylpropyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | <0.0001 | uM |
| benzyl 5-[4-[(3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carbonylamino)methyl]piperidin-1-yl]pentanoate | 548651: Displacement of [3H]GR113808 from human 5HT4 receptor expressed in HEK293 cells by liquid scintillation counting | ki | <0.0001 | uM |
| benzyl 4-[4-[(3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carbonylamino)methyl]piperidin-1-yl]butanoate | 548651: Displacement of [3H]GR113808 from human 5HT4 receptor expressed in HEK293 cells by liquid scintillation counting | ki | <0.0001 | uM |
| 7-fluoro-5-[(1-propylpiperidin-4-yl)methoxy]benzo[h][1,6]naphthyridine | 1057029: Binding affinity to human 5HT4R | ki | <0.0001 | uM |
| methanesulfonic acid;[1-[[4-(2-methoxycarbonylphenyl)phenyl]methyl]piperidin-4-yl]methyl 3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carboxylate | 781013: Displacement of [3H]GR113808 from human 5HT4B receptor expressed in HEK293 cells | ki | <0.0001 | uM |
| N-[[1-[3-(4-propylpiperazin-1-yl)sulfonylpropyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | <0.0001 | uM |
| N-[[1-[3-[4-(4-fluorophenyl)sulfonylpiperazin-1-yl]sulfonylpropyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | <0.0001 | uM |
| N-[[1-[3-(4-propan-2-ylpiperazin-1-yl)sulfonylpropyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | <0.0001 | uM |
| N-[[1-[3-(8-azaspiro[4.5]decan-8-ylsulfonyl)propyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | <0.0001 | uM |
| N-[[1-[3-(4-cyclopentylpiperazin-1-yl)sulfonylpropyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | <0.0001 | uM |
| N-[[1-[[4-(2-methylpropylsulfonylamino)phenyl]methyl]piperidin-4-yl]methyl]-3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carboxamide | 1160988: Displacement of [3H]GR113808 from human 5HT4b receptor expressed in HEK293 cell membranes | ki | 0.0001 | uM |
| N-[[1-(oxan-4-ylmethyl)piperidin-4-yl]methyl]-2-propan-2-ylpyrazolo[1,5-a]pyridine-7-carboxamide | 1375752: Agonist activity at recombinant human 5-HT4E receptor expressed in CHO cells assessed as induction of c-AMP accumulation after 4 hrs by luciferase reporter assay | ec50 | 0.0001 | uM |
| N-[[1-[3-(4-propylsulfonylpiperazin-1-yl)sulfonylpropyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | 0.0001 | uM |
| N-[(1-butylpiperidin-4-yl)methyl]-3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carboxamide | 548651: Displacement of [3H]GR113808 from human 5HT4 receptor expressed in HEK293 cells by liquid scintillation counting | ki | 0.0001 | uM |
| 1-propan-2-yl-N-[[1-(2-pyridin-2-ylethyl)piperidin-4-yl]methyl]indazole-3-carboxamide;hydrochloride | 707296: Displacement of 3Hmethyl 1-methyl-1H-indole-3-carboxylate from human 5HT4R expressed in HEK293 cells | ki | 0.0001 | uM |
| N-[[1-[3-(4-acetylpiperazin-1-yl)sulfonylpropyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | 0.0001 | uM |
| N-[[1-[3-[4-(furan-2-carbonyl)piperazin-1-yl]sulfonylpropyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | 0.0001 | uM |
| N-[[1-[3-(4-pyrrolidin-1-ylsulfonylpiperazin-1-yl)sulfonylpropyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | 0.0001 | uM |
| N-[[1-[3-(4,4-dimethylpiperidin-1-yl)sulfonylpropyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | 0.0001 | uM |
| N-[[1-[3-(4-propan-2-ylsulfonylpiperazin-1-yl)sulfonylpropyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | 0.0001 | uM |
| methyl 2-[4-[[4-[(3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carbonylamino)methyl]piperidin-1-yl]methyl]phenyl]benzoate | 781013: Displacement of [3H]GR113808 from human 5HT4B receptor expressed in HEK293 cells | ki | 0.0001 | uM |
| 2-[4-[[4-(3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carbonyloxymethyl)piperidin-1-yl]methyl]phenyl]-2-methylpropanoic acid | 754104: Displacement of [3H]GR113808 from human 5-HT4B receptor expressed in HEK293 cells after 1 hr by liquid scintillation counting analysis | ki | 0.0001 | uM |
| 2,2-dimethylpropanoyloxymethyl 6-[4-[(3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carbonylamino)methyl]piperidin-1-yl]hexanoate | 548651: Displacement of [3H]GR113808 from human 5HT4 receptor expressed in HEK293 cells by liquid scintillation counting | ki | 0.0001 | uM |
| benzyl 6-[4-[(3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carbonylamino)methyl]piperidin-1-yl]hexanoate | 548651: Displacement of [3H]GR113808 from human 5HT4 receptor expressed in HEK293 cells by liquid scintillation counting | ki | 0.0001 | uM |
| tert-butyl 6-[4-[(3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carbonylamino)methyl]piperidin-1-yl]hexanoate | 548651: Displacement of [3H]GR113808 from human 5HT4 receptor expressed in HEK293 cells by liquid scintillation counting | ki | 0.0001 | uM |
| methyl 6-[4-[(3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carbonylamino)methyl]piperidin-1-yl]hexanoate | 548651: Displacement of [3H]GR113808 from human 5HT4 receptor expressed in HEK293 cells by liquid scintillation counting | ki | 0.0001 | uM |
| ethyl 4-[4-[(3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carbonylamino)methyl]piperidin-1-yl]butanoate | 548651: Displacement of [3H]GR113808 from human 5HT4 receptor expressed in HEK293 cells by liquid scintillation counting | ki | 0.0001 | uM |
| 4-[[4-[[4-[(3R)-oxolan-3-yl]oxy-1,2-benzoxazol-3-yl]oxymethyl]piperidin-1-yl]methyl]oxan-4-ol | 706253: Displacement of [3H]GR113808 from human 5HT4D receptor expressed in HEK293 cells after 30 mins by liquid scintillation counting | ki | 0.0001 | uM |
| 2-[4-[[4-(3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carbonyloxymethyl)piperidin-1-yl]methyl]phenyl]benzoic acid;methanesulfonic acid | 781013: Displacement of [3H]GR113808 from human 5HT4B receptor expressed in HEK293 cells | ki | 0.0001 | uM |
| 7-fluoro-5-[[1-(3,3,3-trifluoropropyl)piperidin-4-yl]methoxy]benzo[h][1,6]naphthyridine | 1057029: Binding affinity to human 5HT4R | ki | 0.0001 | uM |
| [1-(2,3-dihydroxypropyl)piperidin-4-yl]methyl 3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carboxylate | 1160988: Displacement of [3H]GR113808 from human 5HT4b receptor expressed in HEK293 cell membranes | ki | 0.0001 | uM |
| N-[[1-[3-[4-(4-fluorophenyl)piperazin-1-yl]sulfonylpropyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | 0.0001 | uM |
| N-[[1-[3-(4-ethylpiperazin-1-yl)sulfonylpropyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | 0.0001 | uM |
| N-[[1-[3-(4-propylpiperidin-1-yl)sulfonylpropyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | 0.0001 | uM |
| N-[[1-(2-phenylethyl)piperidin-4-yl]methyl]-1-propan-2-ylindazole-3-carboxamide;hydrochloride | 707296: Displacement of 3Hmethyl 1-methyl-1H-indole-3-carboxylate from human 5HT4R expressed in HEK293 cells | ki | 0.0001 | uM |
| N-[[1-(3-piperazin-1-ylsulfonylpropyl)piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | 0.0002 | uM |
| N-[[1-[2-(4-aminophenyl)ethyl]piperidin-4-yl]methyl]-1-propan-2-ylindazole-3-carboxamide;dihydrochloride | 707296: Displacement of 3Hmethyl 1-methyl-1H-indole-3-carboxylate from human 5HT4R expressed in HEK293 cells | ki | 0.0002 | uM |
| N-[[1-[[4-(methanesulfonamido)phenyl]methyl]piperidin-4-yl]methyl]-3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carboxamide | 1160988: Displacement of [3H]GR113808 from human 5HT4b receptor expressed in HEK293 cell membranes | ki | 0.0002 | uM |
| N-[[1-[[4-(cyclohexylsulfonylamino)phenyl]methyl]piperidin-4-yl]methyl]-3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carboxamide | 1160988: Displacement of [3H]GR113808 from human 5HT4b receptor expressed in HEK293 cell membranes | ki | 0.0002 | uM |
| N-[[1-[[4-(methanesulfonamido)phenyl]methyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 1160988: Displacement of [3H]GR113808 from human 5HT4b receptor expressed in HEK293 cell membranes | ki | 0.0002 | uM |
| N-[[1-[[4-(2-methylpropylsulfonylamino)phenyl]methyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 1160988: Displacement of [3H]GR113808 from human 5HT4b receptor expressed in HEK293 cell membranes | ki | 0.0002 | uM |
| N-[[1-(2-cyclohexylethyl)piperidin-4-yl]methyl]-1-propan-2-ylindazole-3-carboxamide;hydrochloride | 707296: Displacement of 3Hmethyl 1-methyl-1H-indole-3-carboxylate from human 5HT4R expressed in HEK293 cells | ki | 0.0002 | uM |
| (4-oxo-2-azatricyclo[3.3.1.02,7]nonan-8-yl) 1H-indole-3-carboxylate | 200911: Potency was evaluated on rabbit heart serotonergic receptors | kd | 0.0002 | uM |
| N-[[1-(3-piperidin-1-ylsulfonylpropyl)piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | 0.0002 | uM |
| N-[[1-[3-[4-(pyridin-3-ylmethyl)piperazin-1-yl]sulfonylpropyl]piperidin-4-yl]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide | 239909: Inhibitory constant for human cloned 5-HT4 receptor | ki | 0.0002 | uM |
| (1-butylpiperidin-4-yl)methyl 4-amino-2-methoxybenzoate | 517043: Agonist activity at 5HT4 receptor expressed in HEK293/L9 cells by cAMP assay | ec50 | 0.0002 | uM |
| methyl 10-[4-[(3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carbonylamino)methyl]piperidin-1-yl]decanoate | 548651: Displacement of [3H]GR113808 from human 5HT4 receptor expressed in HEK293 cells by liquid scintillation counting | ki | 0.0002 | uM |
| tert-butyl 4-[4-[(3,4-dihydro-2H-[1,3]oxazino[3,2-a]indole-10-carbonylamino)methyl]piperidin-1-yl]butanoate | 548651: Displacement of [3H]GR113808 from human 5HT4 receptor expressed in HEK293 cells by liquid scintillation counting | ki | 0.0002 | uM |
CTD chemical–gene interactions
19 total (human), top 19 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| tegaserod | affects binding, increases activity | 2 |
| Valproic Acid | decreases methylation, increases expression | 2 |
| psilocin | increases response to substance, increases phosphorylation, increases activity | 1 |
| sodium arsenite | affects methylation | 1 |
| GR 113808 | affects binding | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| 2-piperidinoethyl 4-amino-5-chloro-2-methoxybenzoate | affects binding, increases activity | 1 |
| bazedoxifene | increases expression | 1 |
| Zoledronic Acid | increases expression | 1 |
| Benzo(a)pyrene | decreases methylation, increases methylation, affects methylation | 1 |
| Etoposide | affects response to substance | 1 |
| Lipopolysaccharides | increases secretion, increases reaction, decreases reaction | 1 |
| Piperazines | affects binding, decreases activity | 1 |
| Psilocybin | increases phosphorylation, increases activity, increases response to substance | 1 |
| Selenium | increases expression | 1 |
| Silicon Dioxide | decreases expression | 1 |
| Testosterone | decreases expression | 1 |
| Aflatoxin B1 | decreases methylation | 1 |
| Cadmium Chloride | increases expression | 1 |
ChEMBL screening assays
349 unique, capped per target: 233 binding, 113 functional, 2 admet, 1 unclassified
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1000204 | Binding | Binding affinity to 5HT4e receptor | Synthesis and evaluation of dibenzothiazepines: a novel class of selective cannabinoid-1 receptor inverse agonists. — J Med Chem |
| CHEMBL1048160 | Functional | Agonist activity at human recombinant 5-HT4 receptor | mu-Opioid/5-HT4 dual pharmacologically active agents-efforts towards an effective opioid analgesic with less GI and respiratory side effects (Part I). — Bioorg Med Chem Lett |
| CHEMBL1738126 | Unclassified | PUBCHEM_BIOASSAY: Late-stage radioligand binding dose response assay to identify inhibitors of NADPH oxidase 1 (NOX1): PDSP screen Ki. (Class of assay: screening) [Related pubchem assays (depositor defined):AID1792, AID1796, AID1823, AID253 | PubChem BioAssay data set |
Cellosaurus cell lines
3 cell lines: 1 transformed cell line, 1 cancer cell line, 1 spontaneously immortalized cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_C0SZ | ACTOne HTR4 | Transformed cell line | Female |
| CVCL_D7RL | Ubigene A-549 HTR4 KO | Cancer cell line | Male |
| CVCL_H382 | CHO-K1/5-HT4/Galpha15 | Spontaneously immortalized cell line | Female |
Clinical trials (associated diseases)
214 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT02399566 | PHASE4 | UNKNOWN | Clinical Trial of Erlotinib and Pemetrexed for Maintenance Treatment in Lung Adenocarcinoma |
| NCT02804646 | PHASE4 | UNKNOWN | Endostar Durative Transfusion Combined With Chemotherapy in the Treatment of Advanced Lung Adenocarcinoma |
| NCT00002852 | PHASE3 | COMPLETED | Surgery With or Without Chemotherapy in Treating Patients With Stage I Non-small Cell Lung Cancer |
| NCT00005838 | PHASE3 | COMPLETED | Combination Chemotherapy Plus Radiation Therapy With or Without AE-941 in Treating Patients With Stage III Non-small Cell Lung Cancer That Cannot Be Removed By Surgery |
| NCT00020709 | PHASE3 | COMPLETED | Combination Chemotherapy and Radiation Therapy With or Without Gefitinib in Treating Patients With Stage III Non-Small Cell Lung Cancer That Cannot Be Removed By Surgery |
| NCT00049543 | PHASE3 | COMPLETED | Gefitinib in Treating Patients With Stage IB, II, or IIIA Non-small Cell Lung Cancer That Was Completely Removed by Surgery |
| NCT00946712 | PHASE3 | TERMINATED | S0819: Carboplatin and Paclitaxel With or Without Bevacizumab and/or Cetuximab in Treating Patients With Stage IV or Recurrent Non-Small Cell Lung Cancer |
| NCT01798485 | PHASE3 | TERMINATED | A Phase 3 Study of Ganetespib in Combination With Docetaxel Versus Docetaxel Alone in Patients With Advanced NSCLC |
| NCT02011997 | PHASE3 | UNKNOWN | Comparison of cVATS Segmentectomy Versus Lobectomy for Lung Adenocarcinoma in Situ and With Microinvasion |
| NCT03391869 | PHASE3 | ACTIVE_NOT_RECRUITING | Nivolumab and Ipilimumab With or Without Local Consolidation Therapy in Treating Patients With Stage IV Non-Small Cell Lung Cancer |
| NCT03676192 | PHASE3 | COMPLETED | To Compare Efficacy and Safety of CT-P16 and European Union-Approved Avastin as First-Line Treatment for Metastatic or Recurrent Non-Squamous Non-Small Cell Lung Cancer |
| NCT04339218 | PHASE3 | RECRUITING | Cryoablation in Combination (or Not) With Pembrolizumab and Pemetrexed-carboplatin in 1st-line Treatment for Patients With Metastatic Lung Adenocarcinoma |
| NCT05204758 | PHASE3 | COMPLETED | Prophylactic TCM for Mitigation of EGFR-TKI Related Dermatological Adverse Effect |
| NCT05717803 | PHASE3 | RECRUITING | Segmentectomy for Ground Glass-dominant Invasive Lung Cancer (ECTOP-1012) |
| NCT05943795 | PHASE3 | ACTIVE_NOT_RECRUITING | A Clinical Study of SI-B001 Combined With Docetaxel in the Treatment of Non-small Cell Lung Adenocarcinoma and Lung Squamous Cell Carcinoma |
| NCT06031181 | PHASE3 | RECRUITING | Sublobar Resection for Adenocarcinoma in Situ/Minimally Invasive Adenocarcinoma Diagnosed by Intraoperative Frozen Section (ECTOP-1019) |
| NCT06031246 | PHASE3 | RECRUITING | Selective Lymph Node Dissection for cT1N0M0 Invasive NSCLC With CTR>0.5 Located in the Apical Segment (ECTOP-1018) |
| NCT06634966 | PHASE3 | RECRUITING | Segmentectomy for Solid-dominant Lung Cancer |
| NCT07169903 | PHASE3 | NOT_YET_RECRUITING | Segmentectomy vs Lobectomy for 2 - 3cm IASLC Grade 1-2 Lung Adenocarcinoma: A Multi-center RCT |
| NCT07481786 | PHASE3 | RECRUITING | Bevacizumab Plus FSRT Versus Hippocampus-Avoidant WBRT in Lung Adenocarcinoma With Extensive Brain Metastases |
| NCT00040794 | PHASE2 | COMPLETED | Combination Chemotherapy, Radiation Therapy, and Gefitinib in Treating Patients With Stage III Non-Small Cell Lung Cancer |
| NCT00087412 | PHASE2 | COMPLETED | S0341: Erlotinib in Treating Patients With Advanced Primary Non-Small Cell Lung Cancer |
| NCT00118144 | PHASE2 | COMPLETED | Bortezomib in Treating Patients With Stage IIIB or Stage IV Lung Cancer |
| NCT00118183 | PHASE2 | COMPLETED | Docetaxel With Either Cetuximab or Bortezomib as First-Line Therapy in Treating Patients With Stage III or Stage IV Non-Small Cell Lung Cancer |
| NCT00126581 | PHASE2 | COMPLETED | Erlotinib Hydrochloride With or Without Carboplatin and Paclitaxel in Treating Patients With Stage III-IV Non-small Cell Lung Cancer |
| NCT00334815 | PHASE2 | ACTIVE_NOT_RECRUITING | Combination Chemotherapy, Radiation Therapy, and Bevacizumab in Treating Patients With Newly Diagnosed Stage III Non-small Cell Lung Cancer That Cannot Be Removed by Surgery |
| NCT00368992 | PHASE2 | COMPLETED | S0536: Cetuximab, Paclitaxel, Carboplatin, and Bevacizumab in Treating Patients With Advanced Non-Small Cell Lung Cancer |
| NCT00511485 | PHASE2 | COMPLETED | Study of Vintafolide (MK-8109, EC145) in Participants With Progressive Adenocarcinoma of the Lung (MK-8109-008, EC-FV-03) |
| NCT00950365 | PHASE2 | COMPLETED | Pemetrexed Disodium With or Without Erlotinib Hydrochloride in Treating Patients With Stage IIIB-IV or Recurrent Non-Small Cell Lung Cancer |
| NCT00955305 | PHASE2 | TERMINATED | Paclitaxel, Carboplatin, and Bevacizumab With or Without Cixutumumab in Treating Patients With Stage IV or Recurrent Non-small Cell Lung Cancer |
| NCT01218516 | PHASE2 | COMPLETED | A Safety and Efficacy Study of Farletuzumab in Participants With Adenocarcinoma of the Lung |
| NCT01294306 | PHASE2 | COMPLETED | MK2206 and Erlotinib Hydrochloride in Treating Patients With Advanced Non-Small Cell Lung Cancer Who Have Progressed After Previous Response to Erlotinib Hydrochloride Therapy |
| NCT01557959 | PHASE2 | COMPLETED | Docetaxel, Cisplatin, Pegfilgrastim, and Erlotinib Hydrochloride in Treating Patients With Stage IIIB or Stage IV Non-Small Cell Lung Cancer |
| NCT01561456 | PHASE2 | COMPLETED | Study of AXL1717 Compared to Docetaxel to Treat Squamous Cell Carcinoma or Adenocarcinoma of the Lung |
| NCT01578551 | PHASE2 | TERMINATED | Study of Metformin Plus Paclitaxel/Carboplatin/Bevacizumab in Patients With Adenocarcinoma. |
| NCT01578668 | PHASE2 | COMPLETED | Erlotinib Plus Pemetrexed to Treat Lung Adenocarcinoma With Brain Metastases |
| NCT01819428 | PHASE2 | TERMINATED | NOV120101 (Poziotinib) for 1st Line Monotherapy in Patients With Lung Adenocarcinoma |
| NCT01935336 | PHASE2 | COMPLETED | Study of Ponatinib in Patients With Lung Cancer Preselected Using Different Candidate Predictive Biomarkers |
| NCT02134912 | PHASE2 | TERMINATED | S1300: Pemetrexed Disodium With or Without Crizotinib in Treating Patients With Stage IV Non-Small Cell Lung Cancer That Has Progressed After Crizotinib |
| NCT02186847 | PHASE2 | COMPLETED | Chemotherapy and Radiation Therapy With or Without Metformin Hydrochloride in Treating Patients With Stage III Non-small Cell Lung Cancer |
Related Atlas pages
- Targeted by drugs: Cisapride, Metoclopramide, Mosapride, Prucalopride, Renzapride, Serotonin, Tegaserod, Tropisetron, Vilazodone
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): squamous cell carcinoma