IFNG
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Summary
IFNG (interferon gamma, HGNC:5438) is a protein-coding gene on chromosome 12q15, encoding Interferon gamma (P01579). Type II interferon produced by immune cells such as T-cells and NK cells that plays crucial roles in antimicrobial, antiviral, and antitumor responses by activating effector immune cells and enhancing antigen presentation.
This gene encodes a soluble cytokine that is a member of the type II interferon class. The encoded protein is secreted by cells of both the innate and adaptive immune systems. The active protein is a homodimer that binds to the interferon gamma receptor which triggers a cellular response to viral and microbial infections. Mutations in this gene are associated with an increased susceptibility to viral, bacterial and parasitic infections and to several autoimmune diseases.
Source: NCBI Gene 3458 — RefSeq curated summary.
At a glance
- Gene–disease (curated): immunodeficiency 69 (Moderate, GenCC)
- GWAS associations: 12
- Clinical variants (ClinVar): 46 total — 2 pathogenic
- Phenotypes (HPO): 110
- Druggable target: yes
- Transcription factor: yes — 19 downstream targets (CollecTRI)
- MANE Select transcript:
NM_000619
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:5438 |
| Approved symbol | IFNG |
| Name | interferon gamma |
| Location | 12q15 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000111537 |
| Ensembl biotype | protein_coding |
| OMIM | 147570 |
| Entrez | 3458 |
Gene structure
Transcript identifiers
Ensembl transcripts: 1 — 1 protein_coding
ENST00000229135
RefSeq mRNA: 1 — MANE Select: NM_000619
NM_000619
CCDS: CCDS8980
Canonical transcript exons
ENST00000229135 — 4 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000751701 | 68158191 | 68158259 |
| ENSE00000751702 | 68157913 | 68158095 |
| ENSE00000871856 | 68154768 | 68155487 |
| ENSE00001305632 | 68159502 | 68159740 |
Expression profiles
Bgee: expression breadth ubiquitous, 119 present calls, max score 96.52.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 1.2024 / max 185.7587, expressed in 94 samples.
FANTOM5 promoters (1 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 131959 | 1.2024 | 94 |
Top tissues by expression
272 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 96.52 | gold quality |
| granulocyte | CL:0000094 | 89.37 | gold quality |
| lymph node | UBERON:0000029 | 69.58 | gold quality |
| bone marrow cell | CL:0002092 | 66.77 | gold quality |
| bone marrow | UBERON:0002371 | 63.70 | gold quality |
| vermiform appendix | UBERON:0001154 | 62.93 | gold quality |
| pancreatic ductal cell | CL:0002079 | 61.30 | silver quality |
| caecum | UBERON:0001153 | 59.45 | gold quality |
| tibialis anterior | UBERON:0001385 | 58.49 | silver quality |
| colonic epithelium | UBERON:0000397 | 56.84 | silver quality |
| decidua | UBERON:0002450 | 56.55 | gold quality |
| gall bladder | UBERON:0002110 | 56.47 | gold quality |
| blood | UBERON:0000178 | 56.39 | gold quality |
| spleen | UBERON:0002106 | 54.70 | gold quality |
| deltoid | UBERON:0001476 | 54.56 | silver quality |
| endometrium epithelium | UBERON:0004811 | 54.21 | gold quality |
| ileal mucosa | UBERON:0000331 | 53.85 | silver quality |
| right lobe of liver | UBERON:0001114 | 53.54 | gold quality |
| hair follicle | UBERON:0002073 | 52.43 | gold quality |
| seminal vesicle | UBERON:0000998 | 51.81 | silver quality |
| epithelial cell of pancreas | CL:0000083 | 51.42 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 51.01 | gold quality |
| rectum | UBERON:0001052 | 50.99 | gold quality |
| Brodmann (1909) area 10 | UBERON:0013541 | 50.97 | gold quality |
| thymus | UBERON:0002370 | 50.95 | gold quality |
| quadriceps femoris | UBERON:0001377 | 50.77 | gold quality |
| frontal pole | UBERON:0002795 | 50.41 | gold quality |
| middle frontal gyrus | UBERON:0002702 | 50.30 | gold quality |
| tonsil | UBERON:0002372 | 50.24 | gold quality |
| paraflocculus | UBERON:0005351 | 50.18 | gold quality |
Single-cell (SCXA)
Detected in 9 experiment(s), a significant marker in 7.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-8 | yes | 8010.29 |
| E-HCAD-1 | yes | 47.95 |
| E-CURD-122 | yes | 29.97 |
| E-CURD-46 | yes | 25.23 |
| E-HCAD-10 | yes | 23.97 |
| E-MTAB-10553 | yes | 12.84 |
| E-ANND-3 | yes | 5.46 |
| E-HCAD-29 | no | 67417.53 |
| E-MTAB-7606 | no | 1355.84 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
19 targets.
| Target | Regulation |
|---|---|
| CCL2 | Activation |
| CD74 | Activation |
| DIO1 | Repression |
| GCH1 | Activation |
| HLA-B | Activation |
| IGF2R | Activation |
| ITGAX | Activation |
| LGALS9 | Activation |
| LPL | Unknown |
| MRC1 | Repression |
| NFAT5 | Activation |
| NOD2 | Activation |
| PFKFB1 | Repression |
| PFKFB3 | Activation |
| PPARG | Activation |
| RIPK2 | Activation |
| S100A10 | Activation |
| SLC40A1 | Repression |
| SOCS1 | Activation |
Upstream regulators (CollecTRI, top): AHR, AP1, ATF1, ATF2, ATF3, BCL3, BCL6, BHLHE40, CEBPB, CEBPG, CREB1, CREM, CTCF, CUX1, DLX4, DNMT3A, EGR1, EGR2, EOMES, EP300, ESR1, ETV5, EZH2, FOS, FOXA2, FOXC1, FOXN1, FOXP1, FOXP3, GATA1, GATA3, GLI2, GLI3, HAND1, HAND2, HLX, HMBOX1, HMGA1, HNF1A, HR
miRNA regulators (miRDB)
43 targeting IFNG, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-513A-5P | 100.00 | 69.77 | 2465 |
| HSA-MIR-3120-5P | 100.00 | 65.56 | 965 |
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-656-3P | 100.00 | 72.15 | 2788 |
| HSA-MIR-607 | 99.97 | 73.62 | 5593 |
| HSA-MIR-1250-3P | 99.96 | 70.04 | 4038 |
| HSA-MIR-590-3P | 99.96 | 74.34 | 6478 |
| HSA-MIR-570-3P | 99.96 | 72.41 | 4910 |
| HSA-MIR-3671 | 99.90 | 73.04 | 3897 |
| HSA-MIR-369-3P | 99.85 | 70.52 | 2264 |
| HSA-MIR-3121-3P | 99.82 | 71.96 | 3630 |
| HSA-MIR-4760-5P | 99.80 | 69.88 | 1619 |
| HSA-MIR-374C-5P | 99.80 | 72.06 | 2910 |
| HSA-MIR-655-3P | 99.80 | 72.19 | 2909 |
| HSA-MIR-4524A-3P | 99.72 | 66.85 | 2406 |
| HSA-MIR-4255 | 99.72 | 67.70 | 1541 |
| HSA-MIR-8061 | 99.63 | 69.44 | 1411 |
| HSA-MIR-24-3P | 99.59 | 69.97 | 1934 |
| HSA-MIR-12122 | 99.56 | 69.33 | 1672 |
| HSA-MIR-12123 | 99.52 | 71.79 | 2990 |
| HSA-MIR-4284 | 99.36 | 65.25 | 1293 |
| HSA-MIR-6853-3P | 99.36 | 70.79 | 1558 |
| HSA-MIR-149-5P | 99.25 | 67.16 | 1315 |
| HSA-MIR-642A-3P | 99.23 | 67.67 | 1258 |
| HSA-MIR-642B-3P | 99.23 | 67.67 | 1258 |
| HSA-MIR-664A-3P | 99.22 | 71.08 | 2696 |
| HSA-MIR-505-3P | 99.19 | 69.71 | 896 |
Literature-anchored findings (GeneRIF, showing 40)
- Penicillin conjugates interferon-gamma and reduces its activity (PMID:11700035)
- Interleukin-6, tumor necrosis factor alpha and interferon gamma serum levels in patients with anorexia nervosa. (PMID:11774563)
- effect on cell proliferation and apoptosis in conjunction with TNF-alpha (PMID:11781187)
- responses to Plasmodium falciparum liver-stage antigen-1 peptide (PMID:11781192)
- novel mechanism by which IFN-gamma can regulate IL-13 responses. (PMID:11786536)
- role of Sp1 and Sp3 in interferon-gamma mediated suppression of macrophage lipoprotein lipase gene transcription (PMID:11796707)
- produced by natural killer cell only upon reaching terminal functional differentiation (PMID:11830476)
- Transient exposure of human bronchial epithelial cells to IFNG leads to persistent increased expression of ICAM-1. (PMID:11831440)
- Two new single nucleotide polymorphisms of the promoter, along with their possible regulatory effects (PMID:11841489)
- P. gingivalis membrane vesicles apparently inhibited IFN-gamma-induced MHC class II by disrupting the IFN-gamma signaling transduction pathway. (PMID:11854199)
- IFN-gamma markedly up-regulated CD14 and MyD88 but not TLR4 protein and MD-2 mRNA expression in human gingival fibroblasts. (PMID:11854210)
- Description of three new polymorphisms in the intronic and 3’UTR regions of the interferon gamma gene (PMID:11857052)
- IL-12R beta 1- and IFN-gamma R1 signals co-ordinately regulate IFN-gamma production, but only IL-12 negatively controls IL-4 production. IL-12 and IFN-gamma signals are each sufficient for IFN-gamma production but both are needed for optimal production. (PMID:11857344)
- Those CD8-positive antigen-specific and alloantigen T-cells secreting interferon gamma have greater cytotoxic potential. (PMID:11861290)
- Regulation of nuclear gamma interferon gene expression by interleukin 12 (IL-12) and IL-2 represents a novel form of posttranscriptional control (PMID:11865054)
- S.stercoralis patients with HTLV-I showed a high frequency of expression of interferon gamma, but those without HTLV-I did not. (PMID:11876761)
- The roles of IFN gamma in protection against tumor development and cancer immunoediting (PMID:11900986)
- Candida albicans stimulates IFN-gamma production in an IL-18, IL-12, and IL-1beta dependent manner in human whole blood cultures (PMID:11920321)
- Results suggest that IFN-gamma facilitates TRAIL-induced activation of mitochondria-regulated as well as mitochondria-independent apoptotic pathways in breast tumour cells. (PMID:11936954)
- Vav activates the IFN-gamma promoter via upregulation of AP-1-binding through a Rac1/JNK pathway (PMID:11943142)
- Reduced levels of gamma-interferon secretion in response to chlamydial 60 kDa heat shock protein amongst women with pelvic inflammatory disease and a history of repeated Chlamydia trachomatis infections (PMID:11947926)
- Interferon-gamma-induced chromatin remodeling at the CIITA locus is BRG1 dependent (PMID:11953317)
- augmented mRNA and surface expression of TLR4 in monocytes and macrophages (PMID:11964313)
- Up-regulation of inducible nitric oxide synthase and nitric oxide in Helicobacter pylori-infected human gastric epithelial cells: possible role of interferon-gamma in polarized nitric oxide secretion. (PMID:11966872)
- conserved helix C region in the superfamily of interferon-gamma /interleukin-10-related cytokines corresponds to a high-affinity binding site for the HSP70 chaperone DnaK (PMID:11970958)
- role in inhibition of respiratory syncytial virus infection of human epithelial cells affected by 2’-5’-oligoadenylate synthetase (PMID:11980899)
- expressed in multiple sclerosis brain lesions (PMID:11984595)
- Cells from infected subjects cultured with ST-Ag all released high levels of gamma interferon (IFN-gamma) into the culture supernatant (PMID:11986281)
- Production of matrix metalloproteinase-9 in early stage B-CLL is suppressed by interferons alpha and gamma. (PMID:11986939)
- production by different populations of erythroid cells derived from human embryonal liver (PMID:11991675)
- Interferon-gamma-mediated downregulation of cholesterol efflux and ABC1 expression is by the Stat1 pathway. (PMID:12006410)
- identifies BRCA1 as a component of the IFN-gamma-regulated signaling pathway and suggests that BRCA1 may play a role in the regulation of IFN-gamma-mediated apoptosis (PMID:12011077)
- association of polymorphism with acute and chronic kidsney transplantation outcome (PMID:12042661)
- mutational switch of il-6 gives an interferon-gamma-like response (PMID:12060750)
- single nucleotide polymorphism in the proximal IFN-gamma promoter alters control of gene transcription (PMID:12070781)
- detected a significant positive correlation between TNF-alpha (r=0.55) and interferon-gamma (r=0.54) mRNA expression and the Beck Depression Inventory sum scores during an acute attack in multiple sclerosis patients (PMID:12084660)
- IFN-gamma plays a critical role in the protection of Schistosoma mansoni-infected patients against periportal fibrosis. (PMID:12097398)
- results indicate opposite effects of IFN-gamma and IL-4 on VEGF expression from normal and activated HF and HK (PMID:12102661)
- Considerable expression of mRNA for this protein was detected in trigeminal ganglia of BALB/C mouse brains during acute HSV-1 infection. (PMID:12162874)
- Lipid microdomains are required sites for the selective endocytosis and nuclear translocation of IFN-gamma. (PMID:12165521)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ifng1 | ENSDARG00000024211 |
| danio_rerio | ifng1r | ENSDARG00000045671 |
| mus_musculus | Ifng | ENSMUSG00000055170 |
| rattus_norvegicus | Ifng | ENSRNOG00000007468 |
Protein
Protein identifiers
Interferon gamma — P01579 (reviewed: P01579)
Alternative names: Immune interferon
All UniProt accessions (2): P01579, A0A7R8GUN6
UniProt curated annotations — full annotation on UniProt →
Function. Type II interferon produced by immune cells such as T-cells and NK cells that plays crucial roles in antimicrobial, antiviral, and antitumor responses by activating effector immune cells and enhancing antigen presentation. Primarily signals through the JAK-STAT pathway after interaction with its receptor IFNGR1 to affect gene regulation. Upon IFNG binding, IFNGR1 intracellular domain opens out to allow association of downstream signaling components JAK2, JAK1 and STAT1, leading to STAT1 activation, nuclear translocation and transcription of IFNG-regulated genes. Many of the induced genes are transcription factors such as IRF1 that are able to further drive regulation of a next wave of transcription. Plays a role in class I antigen presentation pathway by inducing a replacement of catalytic proteasome subunits with immunoproteasome subunits. In turn, increases the quantity, quality, and repertoire of peptides for class I MHC loading. Increases the efficiency of peptide generation also by inducing the expression of activator PA28 that associates with the proteasome and alters its proteolytic cleavage preference. Up-regulates as well MHC II complexes on the cell surface by promoting expression of several key molecules such as cathepsins B/CTSB, H/CTSH, and L/CTSL. Participates in the regulation of hematopoietic stem cells during development and under homeostatic conditions by affecting their development, quiescence, and differentiation.
Subunit / interactions. Homodimer. Interacts with IFNGR1 (via extracellular domain); this interaction promotes IFNGR1 dimerization.
Subcellular location. Secreted.
Tissue specificity. Released primarily from activated T lymphocytes.
Post-translational modifications. Proteolytic processing produces C-terminal heterogeneity, with proteins ending alternatively at Gly-150, Met-157 or Gly-161.
Disease relevance. Aplastic anemia (AA) [MIM:609135] A form of anemia in which the bone marrow fails to produce adequate numbers of peripheral blood elements. It is characterized by peripheral pancytopenia and marrow hypoplasia. Disease susceptibility may be associated with variants affecting the gene represented in this entry. Immunodeficiency 69 (IMD69) [MIM:618963] A form of Mendelian susceptibility to mycobacterial disease, a rare condition caused by impairment of interferon-gamma mediated immunity. It is characterized by predisposition to illness caused by moderately virulent mycobacterial species, such as Bacillus Calmette-Guerin (BCG) vaccine, environmental non-tuberculous mycobacteria, and by the more virulent Mycobacterium tuberculosis. Other microorganisms rarely cause severe clinical disease in individuals with susceptibility to mycobacterial infections. Clinical outcome severity depends on the degree of impairment of interferon-gamma mediated immunity. IMD69 is an autosomal recessive disorder manifesting with fever, hepatosplenomegaly, leukocytosis, and thrombocytosis during the acute infection. The disease is caused by variants affecting the gene represented in this entry.
Induction. By cytokines, most notably interleukin IL-12, secreted by professional antigen-presenting cells such as monocytes/macrophages and dendritic cells.
Similarity. Belongs to the type II (or gamma) interferon family.
RefSeq proteins (1): NP_000610* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR002069 | Interferon_gamma | Family |
| IPR009079 | 4_helix_cytokine-like_core | Homologous_superfamily |
Pfam: PF00714
UniProt features (20 total): helix 9, glycosylation site 2, sequence variant 2, signal peptide 1, chain 1, turn 1, propeptide 1, region of interest 1, compositionally biased region 1, modified residue 1
Structure
Experimental structures (PDB)
8 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 1FYH | X-RAY DIFFRACTION | 2.04 |
| 3BES | X-RAY DIFFRACTION | 2.2 |
| 1EKU | X-RAY DIFFRACTION | 2.9 |
| 1FG9 | X-RAY DIFFRACTION | 2.9 |
| 9VNP | X-RAY DIFFRACTION | 3.02 |
| 6E3K | X-RAY DIFFRACTION | 3.25 |
| 1HIG | X-RAY DIFFRACTION | 3.5 |
| 6E3L | X-RAY DIFFRACTION | 3.8 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P01579-F1 | 85.76 | 0.69 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (1): 24
Glycosylation sites (2): 48, 120
Function
Pathways and Gene Ontology
Reactome pathways
6 pathways
| ID | Pathway |
|---|---|
| R-HSA-877300 | Interferon gamma signaling |
| R-HSA-877312 | Regulation of IFNG signaling |
| R-HSA-8877330 | RUNX1 and FOXP3 control the development of regulatory T lymphocytes (Tregs) |
| R-HSA-8950505 | Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation |
| R-HSA-9732724 | IFNG signaling activates MAPKs |
| R-HSA-9942503 | Differentiation of naive CD4+ T cells to T helper 1 cells (Th1 cells) |
MSigDB gene sets: 1003 (showing top):
BROWNE_HCMV_INFECTION_30MIN_DN, PID_SHP2_PATHWAY, GOBP_MYELOID_CELL_DIFFERENTIATION, TGGTGCT_MIR29A_MIR29B_MIR29C, GOBP_REGULATION_OF_CELL_ACTIVATION, GOBP_EPITHELIUM_DEVELOPMENT, GOBP_REGULATION_OF_AUTOPHAGY, WALLACE_PROSTATE_CANCER_RACE_UP, GOBP_NUCLEOSIDE_DIPHOSPHATE_METABOLIC_PROCESS, GOBP_CELLULAR_RESPONSE_TO_VIRUS, GOBP_REGULATION_OF_OSTEOCLAST_DIFFERENTIATION, GOBP_POSITIVE_REGULATION_OF_ENDOCYTOSIS, GOBP_REGULATION_OF_ALPHA_BETA_T_CELL_ACTIVATION, GOBP_POSITIVE_REGULATION_OF_HEMOPOIESIS, GOBP_NEGATIVE_REGULATION_OF_SMOOTH_MUSCLE_CELL_PROLIFERATION
GO Biological Process (69): negative regulation of transcription by RNA polymerase II (GO:0000122), microglial cell activation (GO:0001774), positive regulation of cytokine production (GO:0001819), adaptive immune response (GO:0002250), macrophage activation involved in immune response (GO:0002281), apoptotic process (GO:0006915), humoral immune response (GO:0006959), cell surface receptor signaling pathway (GO:0007166), cell surface receptor signaling pathway via JAK-STAT (GO:0007259), positive regulation of cell population proliferation (GO:0008284), response to virus (GO:0009615), positive regulation of autophagy (GO:0010508), positive regulation of gene expression (GO:0010628), negative regulation of gene expression (GO:0010629), positive regulation of epithelial cell migration (GO:0010634), macrophage differentiation (GO:0030225), negative regulation of epithelial cell differentiation (GO:0030857), negative regulation of interleukin-17 production (GO:0032700), positive regulation of chemokine production (GO:0032722), positive regulation of interleukin-1 beta production (GO:0032731), positive regulation of interleukin-12 production (GO:0032735), positive regulation of interleukin-23 production (GO:0032747), positive regulation of interleukin-6 production (GO:0032755), positive regulation of tumor necrosis factor production (GO:0032760), obsolete positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response (GO:0032834), positive regulation of peptidyl-serine phosphorylation of STAT protein (GO:0033141), positive regulation of smooth muscle cell apoptotic process (GO:0034393), Fc-gamma receptor signaling pathway involved in phagocytosis (GO:0038096), type III interferon-mediated signaling pathway (GO:0038196), positive regulation of tyrosine phosphorylation of STAT protein (GO:0042531), positive regulation of MHC class II biosynthetic process (GO:0045348), positive regulation of nitric oxide biosynthetic process (GO:0045429), positive regulation of osteoclast differentiation (GO:0045672), positive regulation of glycolytic process (GO:0045821), negative regulation of DNA-templated transcription (GO:0045892), positive regulation of transcription by RNA polymerase II (GO:0045944), astrocyte activation (GO:0048143), negative regulation of smooth muscle cell proliferation (GO:0048662), positive regulation of inflammatory response (GO:0050729), positive regulation of phagocytosis (GO:0050766)
GO Molecular Function (3): cytokine activity (GO:0005125), type II interferon receptor binding (GO:0005133), protein binding (GO:0005515)
GO Cellular Component (2): extracellular region (GO:0005576), obsolete extracellular space (GO:0005615)
Reactome top-level categories
Rollup of top-5 pathways:
| Category | Pathways |
|---|---|
| Interferon gamma signaling | 2 |
| Interferon Signaling | 1 |
| Transcriptional regulation by RUNX1 | 1 |
| Interleukin-12 signaling | 1 |
| Differentiation of T cells | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| immune response | 3 |
| macrophage activation | 2 |
| gene expression | 2 |
| regulation of gene expression | 2 |
| regulation of transcription by RNA polymerase II | 1 |
| transcription by RNA polymerase II | 1 |
| negative regulation of DNA-templated transcription | 1 |
| leukocyte activation involved in inflammatory response | 1 |
| glial cell activation | 1 |
| cytokine production | 1 |
| regulation of cytokine production | 1 |
| positive regulation of gene expression | 1 |
| positive regulation of multicellular organismal process | 1 |
| myeloid cell activation involved in immune response | 1 |
| leukocyte activation involved in immune response | 1 |
| programmed cell death | 1 |
| apoptotic signaling pathway | 1 |
| execution phase of apoptosis | 1 |
| signal transduction | 1 |
| cell surface receptor signaling pathway via STAT | 1 |
| cell population proliferation | 1 |
| regulation of cell population proliferation | 1 |
| positive regulation of cellular process | 1 |
| response to other organism | 1 |
| autophagy | 1 |
| positive regulation of catabolic process | 1 |
| regulation of autophagy | 1 |
| positive regulation of macromolecule biosynthetic process | 1 |
| negative regulation of macromolecule biosynthetic process | 1 |
| epithelial cell migration | 1 |
| regulation of epithelial cell migration | 1 |
| positive regulation of cell migration | 1 |
| myeloid leukocyte differentiation | 1 |
| mononuclear cell differentiation | 1 |
| epithelial cell differentiation | 1 |
| regulation of epithelial cell differentiation | 1 |
| negative regulation of cell differentiation | 1 |
| negative regulation of cytokine production | 1 |
| interleukin-17 production | 1 |
| regulation of interleukin-17 production | 1 |
Protein interactions and networks
STRING
7348 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| IFNG | IL1B | P01584 | 998 |
| IFNG | IFNGR1 | P15260 | 998 |
| IFNG | IFNGR2 | P38484 | 998 |
| IFNG | CD4 | P01730 | 991 |
| IFNG | TNF | P01375 | 990 |
| IFNG | IL4 | P05112 | 990 |
| IFNG | CSF3 | P09919 | 989 |
| IFNG | JAK2 | O60674 | 989 |
| IFNG | IL10 | P22301 | 989 |
| IFNG | IL2 | P01585 | 988 |
| IFNG | CD8A | P01732 | 987 |
| IFNG | CSF2 | P04141 | 982 |
| IFNG | IL6 | P05231 | 982 |
| IFNG | IL3 | P08700 | 981 |
| IFNG | IL17A | Q16552 | 976 |
IntAct
13 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| IFNGR1 | IFNG | psi-mi:“MI:0407”(direct interaction) | 0.880 |
| IFNG | IFNGR1 | psi-mi:“MI:0407”(direct interaction) | 0.880 |
| IFNG | IFNGR1 | psi-mi:“MI:0914”(association) | 0.880 |
| IFNG | IFNGR1 | psi-mi:“MI:0915”(physical association) | 0.880 |
| IFNG | C4R | psi-mi:“MI:0407”(direct interaction) | 0.560 |
| DCAF4 | IGLL5 | psi-mi:“MI:0914”(association) | 0.350 |
| IFNG | OPG193 | psi-mi:“MI:0914”(association) | 0.350 |
| IFNG | TRIM38 | psi-mi:“MI:0914”(association) | 0.350 |
| IFNG | MMP3 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (22): IFNGR1 (Affinity Capture-MS), GOPC (Affinity Capture-MS), IFNG (Affinity Capture-MS), IFNG (Co-crystal Structure), IFNGR1 (Co-crystal Structure), IFNGR1 (Reconstituted Complex), IFNGR2 (Reconstituted Complex), GOPC (Affinity Capture-MS), IFNGR1 (Affinity Capture-MS), ACTB (Affinity Capture-MS), PDF (Affinity Capture-MS), NEDD4 (Affinity Capture-MS), MIB1 (Affinity Capture-MS), MYO18A (Affinity Capture-MS), LIMCH1 (Affinity Capture-MS)
ESM2 similar proteins: A0A1S4F550, A0A2B4SJZ1, A0A903V9Z8, C0HMB7, I7GVL4, O36307, O36405, O50917, O57199, O57571, O77763, P01579, P07611, P09807, P13776, P15628, P20147, P21030, P22622, P27737, P28027, P28341, P34431, P34566, P42160, P46402, P52473, P54890, Q01048, Q01479, Q12079, Q17F11, Q1PD52, Q1PDC9, Q1WM28, Q21738, Q5MIU2, Q5UQ37, Q62574, Q6UY68
Diamond homologs: A4PIZ9, O35497, O35735, O57571, O57603, O57608, O73915, O77763, P01579, P01580, P01581, P07353, P17773, P17803, P28333, P28341, P30123, P42160, P42161, P42162, P46402, P49708, P63309, P63310, P63311, P79154, Q1WM28, Q25BC0, Q2PE75, Q4ZH68, Q5CCK0, Q5I6S9, Q62574, Q647G2, Q7TSP4, Q865W6, Q865X1, Q865Y4, Q866Y6, Q8MKF5
SIGNOR signaling
38 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| IFNG | “up-regulates quantity by expression” | SOCS1 | “transcriptional regulation” |
| IFNG | “up-regulates activity” | RFX5 | |
| IFNG | “up-regulates activity” | IFNGR1 | binding |
| IFNG | “up-regulates activity” | IFNGR2/INFGR1 | binding |
| SOCS1 | down-regulates | IFNG | |
| IFNG | “down-regulates quantity by repression” | LPL | “transcriptional regulation” |
| IFNG | “up-regulates quantity by expression” | HLA-B | “transcriptional regulation” |
| IFNG | “up-regulates quantity by expression” | GCH1 | “transcriptional regulation” |
| IFNG | “up-regulates quantity by expression” | NOD2 | “transcriptional regulation” |
| IFNG | “up-regulates quantity by expression” | RIPK2 | “transcriptional regulation” |
| IFNG | up-regulates | SLC11A1 | |
| PROX1 | “down-regulates quantity by repression” | IFNG | “transcriptional regulation” |
| IFNG | “up-regulates quantity by expression” | S100A10 | “transcriptional regulation” |
| IFNG | up-regulates | Inflammation | |
| IL18 | “up-regulates quantity by expression” | IFNG | “transcriptional regulation” |
| IL12A | “up-regulates quantity by expression” | IFNG | “transcriptional regulation” |
| T_cell_activation | “up-regulates quantity” | IFNG | |
| IFNG | up-regulates | Immune_response | |
| IFNG | up-regulates | ARDS | |
| HMBOX1 | “down-regulates quantity by repression” | IFNG | “transcriptional regulation” |
| M1_polarization | up-regulates | IFNG | |
| IFNG | “up-regulates activity” | IL6 | “transcriptional regulation” |
| STAT4 | “up-regulates activity” | IFNG | “transcriptional regulation” |
| IFNG | up-regulates | IFNGR2 | binding |
| IFNG | up-regulates | IFNGR1 | binding |
| IFNG | down-regulates | MYOD1 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
46 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 2 |
| Likely pathogenic | 0 |
| Uncertain significance | 22 |
| Likely benign | 6 |
| Benign | 5 |
Top pathogenic / likely-pathogenic (2)
| Variant ID | HGVS | Classification |
|---|---|---|
| 14724 | NC_000012.12:g.68159923C>A | Pathogenic |
| 974678 | NM_000619.3(IFNG):c.354_357del (p.Thr119fs) | Pathogenic |
SpliceAI
338 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 12:68155483:GTTAC:G | acceptor_gain | 1.0000 |
| 12:68155484:TTAC:T | acceptor_gain | 1.0000 |
| 12:68155485:TAC:T | acceptor_gain | 1.0000 |
| 12:68155485:TACCT:T | acceptor_loss | 1.0000 |
| 12:68155486:AC:A | acceptor_gain | 1.0000 |
| 12:68155487:CC:C | acceptor_gain | 1.0000 |
| 12:68155487:CCTA:C | acceptor_loss | 1.0000 |
| 12:68155488:C:CC | acceptor_gain | 1.0000 |
| 12:68155492:C:CT | acceptor_gain | 1.0000 |
| 12:68155493:G:T | acceptor_gain | 1.0000 |
| 12:68157909:TCAC:T | donor_loss | 1.0000 |
| 12:68157910:CAC:C | donor_loss | 1.0000 |
| 12:68157911:A:AC | donor_gain | 1.0000 |
| 12:68157912:C:CC | donor_gain | 1.0000 |
| 12:68158091:CTCTC:C | acceptor_gain | 1.0000 |
| 12:68158095:CCT:C | acceptor_gain | 1.0000 |
| 12:68158097:T:C | acceptor_gain | 1.0000 |
| 12:68158097:T:TC | acceptor_gain | 1.0000 |
| 12:68158185:GCTTA:G | donor_loss | 1.0000 |
| 12:68158186:CTTA:C | donor_loss | 1.0000 |
| 12:68158187:TTAC:T | donor_loss | 1.0000 |
| 12:68158188:TA:T | donor_loss | 1.0000 |
| 12:68158189:A:AG | donor_loss | 1.0000 |
| 12:68158190:C:A | donor_loss | 1.0000 |
| 12:68158190:CCT:C | donor_gain | 1.0000 |
| 12:68158255:GCATT:G | acceptor_gain | 1.0000 |
| 12:68158256:CATT:C | acceptor_gain | 1.0000 |
| 12:68158256:CATTC:C | acceptor_gain | 1.0000 |
| 12:68158257:ATT:A | acceptor_gain | 1.0000 |
| 12:68158258:TT:T | acceptor_gain | 1.0000 |
AlphaMissense
1119 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 12:68155447:A:G | L136P | 0.995 |
| 12:68158069:G:C | S70R | 0.992 |
| 12:68158069:G:T | S70R | 0.992 |
| 12:68158071:T:G | S70R | 0.992 |
| 12:68155460:C:G | A132P | 0.991 |
| 12:68155465:C:G | R130P | 0.990 |
| 12:68159515:A:G | L34P | 0.987 |
| 12:68155459:G:T | A132E | 0.986 |
| 12:68155450:T:A | E135V | 0.984 |
| 12:68155447:A:T | L136H | 0.980 |
| 12:68157926:A:G | L118P | 0.980 |
| 12:68158043:A:G | L79P | 0.979 |
| 12:68159515:A:T | L34H | 0.978 |
| 12:68155467:T:A | Q129H | 0.977 |
| 12:68155467:T:G | Q129H | 0.977 |
| 12:68155447:A:C | L136R | 0.976 |
| 12:68158061:A:T | V73D | 0.974 |
| 12:68158219:A:G | F52S | 0.972 |
| 12:68157934:G:C | F115L | 0.970 |
| 12:68157934:G:T | F115L | 0.970 |
| 12:68157936:A:G | F115L | 0.970 |
| 12:68155426:A:G | L143P | 0.967 |
| 12:68155450:T:G | E135A | 0.967 |
| 12:68157935:A:C | F115C | 0.967 |
| 12:68155456:A:T | I133K | 0.966 |
| 12:68157935:A:G | F115S | 0.966 |
| 12:68158218:G:C | F52L | 0.964 |
| 12:68158218:G:T | F52L | 0.964 |
| 12:68158220:A:G | F52L | 0.964 |
| 12:68158064:A:T | I72N | 0.962 |
dbSNP variants (sampled 300 via entrez): RS1000380019 (12:68155638 G>A), RS1000425314 (12:68157285 G>A,C,T), RS1001253993 (12:68161097 C>T), RS1001383949 (12:68157129 A>C,G), RS1001476793 (12:68156810 G>A), RS1002096045 (12:68155690 C>T), RS1002148349 (12:68155099 C>G), RS1002969164 (12:68159411 C>T), RS1004647535 (12:68157670 C>A,T), RS1004746993 (12:68158681 A>T), RS1005340873 (12:68160341 G>A), RS1005701531 (12:68160016 A>C), RS1005887996 (12:68161135 G>C), RS1006192653 (12:68154391 C>T), RS1006275065 (12:68156391 C>A)
Disease associations
OMIM: gene MIM:147570 | disease phenotypes: MIM:609135, MIM:613254, MIM:618963
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| immunodeficiency 69 | Moderate | Autosomal recessive |
Mondo (4): aplastic anemia, susceptibility to (MONDO:0800414), aplastic anemia (MONDO:0015909), tuberous sclerosis 2 (MONDO:0013199), immunodeficiency 69 (MONDO:0033541)
Orphanet (4): Rare aplastic anemia (Orphanet:182040), Idiopathic aplastic anemia (Orphanet:88), Severe mendelian susceptibility to mycobacterial diseases due to complete IFNG deficiency (Orphanet:699618), Tuberous sclerosis complex (Orphanet:805)
HPO phenotypes
110 total (30 of 110 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000077 | Abnormality of the kidney |
| HP:0000083 | Renal insufficiency |
| HP:0000107 | Renal cyst |
| HP:0000113 | Polycystic kidney dysplasia |
| HP:0000169 | Gingival fibromatosis |
| HP:0000225 | Gingival bleeding |
| HP:0000365 | Hearing impairment |
| HP:0000421 | Epistaxis |
| HP:0000573 | Retinal hemorrhage |
| HP:0000708 | Atypical behavior |
| HP:0000716 | Depression |
| HP:0000717 | Autism |
| HP:0000718 | Aggressive behavior |
| HP:0000729 | Autistic behavior |
| HP:0000739 | Anxiety |
| HP:0000752 | Hyperactivity |
| HP:0000821 | Hypothyroidism |
| HP:0000822 | Hypertension |
| HP:0000826 | Precocious puberty |
| HP:0000957 | Cafe-au-lait spot |
| HP:0000988 | Skin rash |
| HP:0001249 | Intellectual disability |
| HP:0001250 | Seizure |
| HP:0001328 | Specific learning disability |
| HP:0001407 | Hepatic cysts |
| HP:0001433 | Hepatosplenomegaly |
| HP:0001482 | Subcutaneous nodule |
| HP:0001508 | Failure to thrive |
GWAS associations
12 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000311_2 | Ulcerative colitis | 3.000000e-12 |
| GCST000624_12 | Ulcerative colitis | 4.000000e-12 |
| GCST000964_37 | Ulcerative colitis | 1.000000e-16 |
| GCST001725_19 | Inflammatory bowel disease | 9.000000e-32 |
| GCST004861_12 | Itch intensity from mosquito bite | 2.000000e-20 |
| GCST004862_200 | Itch intensity from mosquito bite adjusted by bite size | 6.000000e-07 |
| GCST004862_97 | Itch intensity from mosquito bite adjusted by bite size | 4.000000e-11 |
| GCST004865_10 | Itch intensity from mosquito bite adjusted by bite size | 9.000000e-10 |
| GCST004866_10 | Alopecia areata | 4.000000e-07 |
| GCST005025_8 | Anti-saccade response | 3.000000e-06 |
| GCST005752_57 | Systemic lupus erythematosus | 2.000000e-07 |
| GCST007400_71 | Systemic lupus erythematosus | 3.000000e-06 |
EFO canonical traits (3, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0008377 | mosquito bite reaction itch intensity measurement |
| EFO:0008378 | mosquito bite reaction size measurement |
| EFO:0006874 | antisaccade response measurement |
MeSH disease descriptors (2)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D000741 | Anemia, Aplastic | C15.378.050.085; C15.378.190.223.250 |
| C566021 | Tuberous Sclerosis 2 (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL3286073 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB clinical annotations
1 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs2430561 | Efficacy | 3 | Tumor necrosis factor alpha (TNF-alpha) inhibitors | Crohn Disease;Inflammatory Bowel Diseases |
PharmGKB variants
4 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs2069705 | IFNG | 0.00 | 0 | ||
| rs2430561 | IFNG | 3 | 2.75 | 1 | Tumor necrosis factor alpha (TNF-alpha) inhibitors |
| rs2069716 | IFNG | 0.00 | 0 | ||
| rs1861494 | IFNG | 0.00 | 0 |
ChEMBL bioactivities
2 potent at pChembl≥5 of 2 total, top 2 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 5.16 | Kd | 7000 | nM | CHEMBL3288260 |
| 5.00 | Kd | 1e+04 | nM | CHEMBL3288259 |
PubChem BioAssay actives
2 with measured affinity, of 3 total; 2 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| nonasodium;(2R,3S,4S,5R,6R)-6-[(2R,3S,4R,5R,6R)-5-acetamido-6-[(2R,3S,4S,5R,6R)-6-[(2R,3S,4R,5R,6R)-6-[(2R,3S,4R,5R,6R)-6-[(2R,3S,4R,5R,6S)-5-acetamido-4-hydroxy-6-pentoxy-2-(sulfonatooxymethyl)oxan-3-yl]oxy-2-carboxylato-4,5-dihydroxyoxan-3-yl]oxy-4-hydroxy-5-(sulfonatoamino)-2-(sulfonatooxymethyl)oxan-3-yl]oxy-2-carboxylato-4-hydroxy-5-sulfonatooxyoxan-3-yl]oxy-4-hydroxy-2-(sulfonatooxymethyl)oxan-3-yl]oxy-3,4-dihydroxy-5-sulfonatooxyoxane-2-carboxylate | 1152100: Binding affinity to human recombinant IFN-gamma by surface plasmon resonance assay | kd | 7.0000 | uM |
| nonasodium;(2R,3S,4S,5R,6R)-6-[(2R,3S,4R,5R,6R)-6-[(2R,3S,4S,5R,6R)-6-[(2R,3S,4R,5R,6R)-6-[(2R,3S,4S,5R,6R)-6-[(2R,3S,4R,5R,6S)-6-(5-aminopentoxy)-4-hydroxy-2-(hydroxymethyl)-5-(sulfonatoamino)oxan-3-yl]oxy-2-carboxylato-4-hydroxy-5-sulfonatooxyoxan-3-yl]oxy-4-hydroxy-2-(hydroxymethyl)-5-(sulfonatoamino)oxan-3-yl]oxy-2-carboxylato-4-hydroxy-5-sulfonatooxyoxan-3-yl]oxy-4-hydroxy-2-(hydroxymethyl)-5-(sulfonatoamino)oxan-3-yl]oxy-3,4-dihydroxy-5-sulfonatooxyoxane-2-carboxylate | 1152100: Binding affinity to human recombinant IFN-gamma by surface plasmon resonance assay | kd | 10.0000 | uM |
CTD chemical–gene interactions
477 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Lipopolysaccharides | affects expression, affects localization, affects secretion, increases abundance, decreases expression (+10 more) | 48 |
| Tetradecanoylphorbol Acetate | decreases reaction, increases secretion, increases activity, increases reaction, decreases expression (+3 more) | 19 |
| Particulate Matter | affects methylation, decreases expression, affects expression, decreases secretion, increases expression (+6 more) | 15 |
| Resveratrol | affects cotreatment, increases expression, increases localization, increases response to substance, decreases reaction (+6 more) | 12 |
| Dexamethasone | affects reaction, decreases secretion, increases secretion, increases phosphorylation, increases reaction (+4 more) | 12 |
| Tretinoin | increases expression, affects reaction, increases phosphorylation, increases reaction, affects cotreatment (+7 more) | 11 |
| Ionomycin | decreases reaction, increases secretion, increases activity, affects reaction, affects cotreatment (+2 more) | 11 |
| Vehicle Emissions | affects cotreatment, decreases expression, affects expression, increases expression | 9 |
| Nitric Oxide | increases reaction, decreases reaction, increases abundance, increases secretion, affects response to substance (+2 more) | 9 |
| Air Pollutants | decreases reaction, increases phosphorylation, affects methylation, increases abundance, increases methylation (+5 more) | 8 |
| nickel sulfate | increases reaction, affects expression, affects cotreatment, decreases expression, decreases reaction (+2 more) | 7 |
| SB 203580 | decreases reaction, increases chemical synthesis, decreases response to substance, affects binding, decreases expression (+4 more) | 7 |
| Zinc | increases secretion, affects cotreatment, affects reaction, increases cleavage, decreases uptake (+2 more) | 7 |
| alpha-cyano-(3,4-dihydroxy)-N-benzylcinnamide | decreases reaction, increases expression, increases phosphorylation, affects cotreatment, increases secretion (+2 more) | 6 |
| Ozone | increases methylation, affects cotreatment, decreases expression, affects methylation, increases abundance (+1 more) | 6 |
| Tacrolimus | decreases secretion, affects cotreatment, decreases expression, decreases reaction, increases expression | 6 |
| Cyclosporine | affects cotreatment, decreases expression, decreases reaction, increases expression, increases secretion (+1 more) | 6 |
| Simvastatin | affects reaction, decreases expression, decreases secretion, decreases reaction, increases expression (+1 more) | 6 |
| 2-(2-amino-3-methoxyphenyl)-4H-1-benzopyran-4-one | decreases reaction, increases expression, decreases phosphorylation, affects cotreatment, increases chemical synthesis (+3 more) | 5 |
| Decitabine | increases expression, increases reaction, decreases reaction, affects cotreatment, increases activity (+1 more) | 5 |
| Arsenic Trioxide | decreases expression, increases activity, increases reaction, increases expression, increases phosphorylation | 5 |
| Histamine | decreases reaction, increases expression, affects expression, affects binding, affects reaction (+4 more) | 5 |
| Methotrexate | increases expression, decreases expression, decreases reaction, affects reaction, decreases secretion (+1 more) | 5 |
| Quercetin | increases secretion, affects cotreatment, decreases reaction, increases expression, increases abundance (+1 more) | 5 |
| Ribavirin | affects reaction, increases secretion, increases expression, decreases reaction, decreases expression (+1 more) | 5 |
| Cadmium Chloride | increases secretion, decreases reaction, increases expression, increases phosphorylation, affects cotreatment (+2 more) | 5 |
| deoxynivalenol | affects cotreatment, decreases reaction, increases expression, affects expression, increases abundance | 4 |
| Ribomunyl | increases secretion, increases expression, increases reaction, affects cotreatment, decreases reaction | 4 |
| 4-(4-fluorophenyl)-2-(4-hydroxyphenyl)-5-(4-pyridyl)imidazole | increases expression, increases secretion, increases reaction, affects cotreatment, decreases reaction | 4 |
| 3-(4-methylphenylsulfonyl)-2-propenenitrile | affects cotreatment, decreases reaction, increases expression, increases phosphorylation, increases secretion | 4 |
ChEMBL screening assays
1 unique, capped per target: 1 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3293897 | Binding | Binding affinity to human recombinant IFN-gamma by surface plasmon resonance assay | Synthesis and biological evaluation of a unique heparin mimetic hexasaccharide for structure-activity relationship studies. — J Med Chem |
Cellosaurus cell lines
24 cell lines: 17 transformed cell line, 7 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_3711 | CHO E-10C101-250 | Transformed cell line | Female |
| CVCL_B0Z6 | Abcam Jurkat IFNG KO | Cancer cell line | Male |
| CVCL_B7TC | ACN/IFN-gamma | Cancer cell line | Sex unspecified |
| CVCL_B7TE | SK/IFN-gamma | Cancer cell line | Male |
| CVCL_E4CP | NCI-H69/IFN-gamma | Cancer cell line | Male |
| CVCL_E4CR | NCI-H69/IL2/IFN-gamma | Cancer cell line | Male |
| CVCL_E4CS | NCI-N592/IFN-gamma | Cancer cell line | Male |
| CVCL_E4CU | NCI-N592/IL2/IFN-gamma | Cancer cell line | Male |
| CVCL_E4HM | CHO E-10B | Transformed cell line | Female |
| CVCL_E4HN | CHO E-10C | Transformed cell line | Female |
Clinical trials (associated diseases)
225 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT01818726 | PHASE4 | TERMINATED | Safety and Efficacy of Exjade in the Treatment of Transfusion-dependent Iron Overload in Aplastic Anemia Patients |
| NCT01995331 | PHASE4 | UNKNOWN | Moderate-dose Cyclophosphamide for Childhood Acquired Aplastic Anemia |
| NCT01997372 | PHASE4 | UNKNOWN | Different Doses of Anti-thymocyte Globin to Treat Child Severe Aplastic Anemia |
| NCT02745717 | PHASE4 | COMPLETED | The Efficacy of Immunosuppressive Therapy Combined With Cord Blood Transfusion in Treatment of Severe Aplastic Anemia |
| NCT02838992 | PHASE4 | UNKNOWN | ATG Combined With Cyclophosphamide And Cord Blood Transfusion in Treating Patients With Severe Aplastic Anemia |
| NCT02875743 | PHASE4 | COMPLETED | King’s Invasive Aspergillosis Study II |
| NCT03176849 | PHASE4 | COMPLETED | A Randomized Phase IV Control Trial of Single High Dose Oral Vitamin D3 in Pediatric Patients Undergoing HSCT |
| NCT03896971 | PHASE4 | COMPLETED | Combination of Thrombopoietin Mimetic and Immunosuppressive Therapy in Aplastic Anaemia |
| NCT05996393 | PHASE4 | COMPLETED | CsA+ATG+AVA vs. CsA+AVA for the Treatment of Newly-diagnosed SAA in the Elderly |
| NCT06004791 | PHASE4 | UNKNOWN | A Prospective, Randomized, Controlled Study of rhTPO in Combination With Herombopag + CsA vs Herombopag + CsA for the Treatment of Primary TD-NSAA |
| NCT06009965 | PHASE4 | UNKNOWN | Efficacy of IST Combined With TPO-RA in the Treatment of AA and Establishment of a Recurrence Prediction System |
| NCT06069180 | PHASE4 | UNKNOWN | The Optimization of Conditioning Regimen for HLA Matched HSCT in SAA |
| NCT06424639 | PHASE4 | NOT_YET_RECRUITING | Luspatercept Plus CsA vs CsA for the Treatment of Newly Diagnosed Non-Transfusion-Dependent NSAA |
| NCT06426043 | PHASE4 | NOT_YET_RECRUITING | A Prospective Study on the Treatment of Recurrent/Refractory/Intolerable NSAA With Lusutrombopag |
| NCT06516484 | PHASE4 | NOT_YET_RECRUITING | Ropustin for Refractory Aplastic Anaemia After Radiotherapy - a Single-centre, Prospective, Open-label, Single-arm Study |
| NCT06525948 | PHASE4 | NOT_YET_RECRUITING | Efficacy and Safety of rhTPO in Combination With Cyclosporine Versus Cyclosporine Alone in the Treatment of TD-NSAA |
| NCT06535685 | PHASE4 | NOT_YET_RECRUITING | A Study of Romiplostim for the Treatment of Refractory Transfusion-dependent NSAA |
| NCT00004474 | PHASE3 | COMPLETED | Phase III Randomized Study of Cyclophosphamide With or Without Antithymocyte Globulin Before Bone Marrow Transplantation in Patients With Aplastic Anemia |
| NCT01145976 | PHASE3 | UNKNOWN | Comparison of Cy-Atg vs Flu-Atg for the Conditioning Therapy in Allo-HCT for Adult Aplastic Anemia |
| NCT01343680 | PHASE3 | TERMINATED | Trial of Two Central Venous Catheter (CVC) Flushing Schemes in Pediatric Hematology and Oncology Patients |
| NCT02099747 | PHASE3 | COMPLETED | hATG+CsA vs hATG+CsA+Eltrombopag for SAA |
| NCT03825744 | PHASE3 | COMPLETED | Hetrombopag or Placebo in Treatment-Naive Severe Aplastic Anemia |
| NCT04350606 | PHASE3 | COMPLETED | A Study to Assess Efficacy and Safety of PF-06462700 in Japanese Participants With Aplastic Anemia |
| NCT05600426 | PHASE3 | ACTIVE_NOT_RECRUITING | A Trial Comparing Unrelated Donor BMT With IST for Pediatric and Young Adult Patients With Severe Aplastic Anemia (TransIT, BMT CTN 2202) |
| NCT06940570 | PHASE3 | SUSPENDED | Methadone as an Alternative Treatment for Children Underdoing HSCT |
| NCT07001397 | PHASE3 | NOT_YET_RECRUITING | Study on the Short-term Efficacy and Safety of Recombinant Human Thrombopoietin Combined With Immunosuppressant Sequential Eltrombopag Ethanolamine Dry Suspension in the Treatment of SAA/TD-NSAA |
| NCT00001962 | PHASE2 | TERMINATED | A Study to Determine Whether Therapy With Daclizumab Will Benefit Patients With Bone Marrow Failure |
| NCT00001964 | PHASE2 | COMPLETED | Combination Therapy of Severe Aplastic Anemia |
| NCT00004143 | PHASE2 | COMPLETED | Allogeneic Mixed Chimerism Stem Cell Transplant Using Campath for Hemoglobinopathies & Bone Marrow Failure Syndromes |
| NCT00004323 | PHASE2 | COMPLETED | Phase II Study of Bone Marrow Transplantation Using Related Donors in Patients With Aplastic Anemia |
| NCT00004464 | PHASE2 | COMPLETED | Study of High Dose Cyclophosphamide in Patients With Severe Aplastic Anemia and Paroxysmal Nocturnal Hemoglobinuria |
| NCT00005935 | PHASE2 | COMPLETED | Mycophenolate Mofetil and Cyclosporine to Treat Relapsing Aplastic Anemia |
| NCT00053989 | PHASE2 | COMPLETED | NMA Allogeneic Hematopoietic Cell Transplant in Hematologic Cancer/Disorders |
| NCT00061360 | PHASE2 | COMPLETED | Improving Immunosuppressive Treatment for Patients With Severe Aplastic Anemia |
| NCT00065260 | PHASE2 | COMPLETED | Rabbit Antithymocyte Globulin Versus Campath-1H for Treating Severe Aplastic Anemia |
| NCT00343785 | PHASE2 | COMPLETED | Cyclophosphamide and Anti-thymocyte Globulin Followed By Methotrexate and Cyclosporine in Preventing Chronic Graft-Versus-Host Disease in Patients With Severe Aplastic Anemia Undergoing Donor Bone Marrow Transplant |
| NCT00358657 | PHASE2 | TERMINATED | Fludarabine Phosphate, Cyclophosphamide, and Total-Body Irradiation Followed by Donor Bone Marrow Transplant and Cyclophosphamide, Mycophenolate Mofetil, Tacrolimus, and Sirolimus in Treating Patients With Primary Immunodeficiency Disorders or Noncancerous Inherited Disorders |
| NCT00471848 | PHASE2 | COMPLETED | Rabbit Antithymocyte Globulin (Thymoglobuline) With Ciclosporin for Patients With Acquired Aplastic Anaemia |
| NCT00516152 | PHASE2 | COMPLETED | Phase II Study Evaluating Busulfan and Fludarabine as Preparative Therapy in Adults With Hematopoietic Disorders Undergoing MUD SCT |
| NCT00533923 | PHASE2 | COMPLETED | Nonmyeloablative Allogeneic Stem Cell Transplantation From HLA-Matched Unrelated Donor for the Treatment of Hematologic Disorders |
Related Atlas pages
- Associated diseases: immunodeficiency 69
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): alopecia areata, aplastic anemia, aplastic anemia, susceptibility to, immunodeficiency 69, tuberous sclerosis 2