IGBP1-AS1

Summary

IGBP1-AS1 (IGBP1 antisense RNA 1, HGNC:40295) is a long non-coding RNA gene on chromosome Xq13.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40295
Approved symbol	IGBP1-AS1
Name	IGBP1 antisense RNA 1
Location	Xq13.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000203588
Ensembl biotype	lncRNA
Entrez	100873991
RNAcentral	URS00001B39D3 — lncRNA, 542 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000366397

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000366397 — 2 exons

Exon	Start	End
ENSE00001680112	70164952	70165206
ENSE00001784244	70163842	70164128

Expression profiles

Bgee: expression breadth ubiquitous, 130 present calls, max score 84.01.

Top tissues by expression

130 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.01	silver quality
lower esophagus mucosa	UBERON:0035834	72.10	gold quality
ganglionic eminence	UBERON:0004023	69.17	gold quality
bone marrow	UBERON:0002371	68.53	gold quality
skeletal muscle tissue	UBERON:0001134	67.05	gold quality
bone marrow cell	CL:0002092	66.82	silver quality
endometrium	UBERON:0001295	66.42	gold quality
stromal cell of endometrium	CL:0002255	65.45	gold quality
mucosa of transverse colon	UBERON:0004991	65.31	gold quality
granulocyte	CL:0000094	64.43	gold quality
monocyte	CL:0000576	63.78	gold quality
cortical plate	UBERON:0005343	63.71	gold quality
leukocyte	CL:0000738	63.63	gold quality
body of pancreas	UBERON:0001150	63.27	gold quality
colonic epithelium	UBERON:0000397	63.21	silver quality
spleen	UBERON:0002106	62.47	gold quality
right uterine tube	UBERON:0001302	62.12	gold quality
small intestine Peyer’s patch	UBERON:0003454	61.98	gold quality
pancreas	UBERON:0001264	61.97	gold quality
transverse colon	UBERON:0001157	61.79	gold quality
blood	UBERON:0000178	61.77	gold quality
small intestine	UBERON:0002108	61.60	gold quality
right lobe of thyroid gland	UBERON:0001119	61.56	gold quality
mucosa of stomach	UBERON:0001199	61.34	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.76	gold quality
right lobe of liver	UBERON:0001114	60.73	gold quality
liver	UBERON:0002107	60.51	gold quality
prostate gland	UBERON:0002367	60.21	gold quality
thyroid gland	UBERON:0002046	59.96	gold quality
esophagus mucosa	UBERON:0002469	59.94	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.09

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.