IGBP1-AS2

Summary

IGBP1-AS2 (IGBP1 antisense RNA 2, HGNC:40294) is a long non-coding RNA gene on chromosome Xq13.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40294
Approved symbol	IGBP1-AS2
Name	IGBP1 antisense RNA 2
Location	Xq13.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000220925
Ensembl biotype	lncRNA
Entrez	106478965
RNAcentral	URS0000549372 — lncRNA, 513 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000403371

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000403371 — 2 exons

Exon	Start	End
ENSE00001657577	70148582	70148968
ENSE00001708152	70149529	70149654

Expression profiles

Bgee: expression breadth ubiquitous, 124 present calls, max score 83.46.

Top tissues by expression

124 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	83.46	silver quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.29	silver quality
cortical plate	UBERON:0005343	68.33	gold quality
colonic epithelium	UBERON:0000397	66.57	silver quality
hindlimb stylopod muscle	UBERON:0004252	65.72	gold quality
bone marrow cell	CL:0002092	65.64	silver quality
muscle tissue	UBERON:0002385	65.43	gold quality
bone marrow	UBERON:0002371	61.63	gold quality
skeletal muscle tissue	UBERON:0001134	60.37	gold quality
monocyte	CL:0000576	59.62	gold quality
leukocyte	CL:0000738	59.36	gold quality
primary visual cortex	UBERON:0002436	57.00	gold quality
stromal cell of endometrium	CL:0002255	56.96	gold quality
tonsil	UBERON:0002372	56.37	silver quality
placenta	UBERON:0001987	55.75	silver quality
duodenum	UBERON:0002114	55.41	gold quality
granulocyte	CL:0000094	55.27	gold quality
blood	UBERON:0000178	54.50	gold quality
endometrium	UBERON:0001295	53.92	silver quality
lymph node	UBERON:0000029	53.91	gold quality
gall bladder	UBERON:0002110	53.67	gold quality
islet of Langerhans	UBERON:0000006	53.42	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	53.04	gold quality
prefrontal cortex	UBERON:0000451	52.94	gold quality
mucosa of transverse colon	UBERON:0004991	52.80	gold quality
adrenal tissue	UBERON:0018303	50.68	silver quality
uterine cervix	UBERON:0000002	50.29	silver quality
muscle of leg	UBERON:0001383	49.65	gold quality
urinary bladder	UBERON:0001255	49.63	gold quality
liver	UBERON:0002107	49.31	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.05

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.