ILK
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Summary
ILK (integrin linked kinase, HGNC:6040) is a protein-coding gene on chromosome 11p15.4, encoding Scaffold protein ILK (Q13418). Scaffold protein which mediates protein-protein interactions during a range of cellular events including focal adhesion assembly, cell adhesion and cell migration. It is a selective cancer dependency (DepMap: 30.3% of cell lines).
This gene encodes a protein with a kinase-like domain and four ankyrin-like repeats. The encoded protein associates at the cell membrane with the cytoplasmic domain of beta integrins, where it regulates integrin-mediated signal transduction. Activity of this protein is important in the epithelial to mesenchymal transition, and over-expression of this gene is implicated in tumor growth and metastasis. Alternative splicing results in multiple transcript variants.
Source: NCBI Gene 3611 — RefSeq curated summary.
At a glance
- Gene–disease (curated): dilated cardiomyopathy (Limited, ClinGen)
- GWAS associations: 3
- Clinical variants (ClinVar): 359 total
- Phenotypes (HPO): 1
- Druggable target: yes — 4 molecules with ChEMBL bioactivity
- Cancer dependency (DepMap): dependent in 30.3% of screened cell lines
- MANE Select transcript:
NM_004517
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:6040 |
| Approved symbol | ILK |
| Name | integrin linked kinase |
| Location | 11p15.4 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000166333 |
| Ensembl biotype | protein_coding |
| OMIM | 602366 |
| Entrez | 3611 |
Gene structure
Transcript identifiers
Ensembl transcripts: 35 — 27 protein_coding, 3 protein_coding_CDS_not_defined, 3 nonsense_mediated_decay, 2 retained_intron
ENST00000299421, ENST00000396751, ENST00000420936, ENST00000524735, ENST00000526114, ENST00000526318, ENST00000526711, ENST00000527121, ENST00000528784, ENST00000528995, ENST00000530016, ENST00000532063, ENST00000534565, ENST00000534706, ENST00000537806, ENST00000627400, ENST00000875220, ENST00000875221, ENST00000875222, ENST00000875223, ENST00000875224, ENST00000875225, ENST00000875226, ENST00000875227, ENST00000875228, ENST00000918172, ENST00000918173, ENST00000918174, ENST00000951914, ENST00000951915, ENST00000951916, ENST00000951917, ENST00000951918, ENST00000951919, ENST00000951920
RefSeq mRNA: 5 — MANE Select: NM_004517
NM_001014794, NM_001014795, NM_001278441, NM_001278442, NM_004517
CCDS: CCDS60712, CCDS60713, CCDS7768
Canonical transcript exons
ENST00000299421 — 13 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001188614 | 6604180 | 6604360 |
| ENSE00003469064 | 6608046 | 6608211 |
| ENSE00003576399 | 6608884 | 6608967 |
| ENSE00003577304 | 6608394 | 6608489 |
| ENSE00003579110 | 6609724 | 6609845 |
| ENSE00003586971 | 6608694 | 6608790 |
| ENSE00003656912 | 6609936 | 6610035 |
| ENSE00003657452 | 6609299 | 6609408 |
| ENSE00003684724 | 6609512 | 6609639 |
| ENSE00003691494 | 6609071 | 6609156 |
| ENSE00003713337 | 6610148 | 6610278 |
| ENSE00003901396 | 6610462 | 6610870 |
| ENSE00003901740 | 6603774 | 6603822 |
Expression profiles
Bgee: expression breadth ubiquitous, 287 present calls, max score 99.43.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 43.0082 / max 507.8405, expressed in 1823 samples.
FANTOM5 promoters (5 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 112867 | 38.2559 | 1822 |
| 112866 | 2.1094 | 1382 |
| 112869 | 1.5579 | 886 |
| 112868 | 1.0190 | 688 |
| 112871 | 0.0660 | 13 |
Top tissues by expression
294 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| body of uterus | UBERON:0009853 | 99.43 | gold quality |
| popliteal artery | UBERON:0002250 | 99.39 | gold quality |
| tibial artery | UBERON:0007610 | 99.39 | gold quality |
| right coronary artery | UBERON:0001625 | 99.38 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 99.37 | gold quality |
| aorta | UBERON:0000947 | 99.36 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 99.36 | gold quality |
| ascending aorta | UBERON:0001496 | 99.34 | gold quality |
| thoracic aorta | UBERON:0001515 | 99.34 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 99.34 | gold quality |
| lower esophagus | UBERON:0013473 | 99.34 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 99.27 | gold quality |
| saphenous vein | UBERON:0007318 | 99.21 | gold quality |
| left coronary artery | UBERON:0001626 | 99.15 | gold quality |
| coronary artery | UBERON:0001621 | 99.14 | gold quality |
| left uterine tube | UBERON:0001303 | 99.13 | gold quality |
| mucosa of stomach | UBERON:0001199 | 99.12 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 99.11 | gold quality |
| myometrium | UBERON:0001296 | 98.99 | gold quality |
| endocervix | UBERON:0000458 | 98.79 | gold quality |
| apex of heart | UBERON:0002098 | 98.78 | gold quality |
| stromal cell of endometrium | CL:0002255 | 98.74 | gold quality |
| blood vessel layer | UBERON:0004797 | 98.73 | gold quality |
| fundus of stomach | UBERON:0001160 | 98.46 | gold quality |
| heart left ventricle | UBERON:0002084 | 98.42 | gold quality |
| right atrium auricular region | UBERON:0006631 | 98.40 | gold quality |
| cardiac ventricle | UBERON:0002082 | 98.38 | gold quality |
| right ovary | UBERON:0002118 | 98.38 | gold quality |
| tibial nerve | UBERON:0001323 | 98.32 | gold quality |
| heart | UBERON:0000948 | 98.31 | gold quality |
Single-cell (SCXA)
Detected in 12 experiment(s), a significant marker in 12.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-10287 | yes | 40.03 |
| E-CURD-112 | yes | 37.41 |
| E-HCAD-4 | yes | 37.29 |
| E-HCAD-1 | yes | 32.29 |
| E-CURD-122 | yes | 24.01 |
| E-MTAB-8410 | yes | 22.60 |
| E-MTAB-9221 | yes | 17.39 |
| E-HCAD-10 | yes | 16.97 |
| E-MTAB-9067 | yes | 13.33 |
| E-HCAD-11 | yes | 10.34 |
| E-ANND-3 | yes | 10.29 |
| E-GEOD-134144 | yes | 8.09 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): AP1, ERG, ETS1, FOS, FOXC1, HIF1A, JUN, KLF5, LIMS1, NFKB, PARP1, PPARD, REL, RELA, SNAI1, SP1, TBP, TFAP2A, TP53, TWIST1, TWIST2
miRNA regulators (miRDB)
25 targeting ILK, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4425 | 100.00 | 67.59 | 1049 |
| HSA-MIR-6825-5P | 99.96 | 69.81 | 3431 |
| HSA-MIR-335-3P | 99.93 | 73.36 | 4958 |
| HSA-MIR-3150A-3P | 99.76 | 64.44 | 1640 |
| HSA-MIR-6763-5P | 99.76 | 64.68 | 1767 |
| HSA-MIR-3679-3P | 99.64 | 69.88 | 1599 |
| HSA-MIR-1275 | 99.47 | 67.90 | 2749 |
| HSA-MIR-542-3P | 99.34 | 67.58 | 1270 |
| HSA-MIR-4505 | 99.27 | 67.81 | 2678 |
| HSA-MIR-4667-3P | 99.26 | 65.45 | 1608 |
| HSA-MIR-5787 | 99.22 | 67.86 | 2628 |
| HSA-MIR-6809-5P | 99.13 | 68.45 | 1223 |
| HSA-MIR-3688-5P | 99.12 | 69.67 | 1091 |
| HSA-MIR-4504 | 99.10 | 69.14 | 1328 |
| HSA-MIR-5701 | 98.97 | 69.54 | 1502 |
| HSA-MIR-4742-5P | 98.89 | 68.41 | 1542 |
| HSA-MIR-1227-5P | 98.65 | 65.32 | 1549 |
| HSA-MIR-758-3P | 98.42 | 68.60 | 1122 |
| HSA-MIR-6881-5P | 98.16 | 67.38 | 665 |
| HSA-MIR-1470 | 98.11 | 63.53 | 399 |
| HSA-MIR-6757-5P | 98.08 | 65.50 | 724 |
| HSA-MIR-30C-1-3P | 97.80 | 66.36 | 1499 |
| HSA-MIR-30C-2-3P | 97.80 | 66.45 | 1499 |
| HSA-MIR-6788-5P | 97.80 | 66.41 | 1532 |
| HSA-MIR-624-5P | 96.00 | 68.88 | 728 |
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 30.3% of screened cell lines.
Literature-anchored findings (GeneRIF, showing 40)
- Role of integrin-linked kinase in leukocyte recruitment (PMID:11856758)
- Integrin-linked kinase phosphorylates the myosin phosphatase target subunit at the inhibitory site in platelet cytoskeleton. (PMID:11931630)
- Ionizing radiation strongly induced the expression of functional beta1-integrin and ILK in the two lung cancer cell lines, A549 and SKMES1. (PMID:12020426)
- Integrin-linked kinase transiently associates with and phosphorylates beta3 in a PI3-kinase dependent manner (PMID:12152651)
- Ganglioside loss promotes survival primarily by activating integrin-linked kinase/Akt without phosphoinositide 3-OH kinase signaling. (PMID:12164932)
- the ILK-affixin complex has a role in integrin-cytoskeleton linkage during platelet aggregation (PMID:12372433)
- Assembly of the PINCH-ILK-CH-ILKBP complex precedes and is essential for localization of each component to cell-matrix adhesion sites (PMID:12432066)
- role in alpha(v)integrin in regulating cell proliferation in ovarian cancer cells (PMID:12642872)
- Cells that are depleted of this enzyme undergo extensive apoptosis. (PMID:12654898)
- role in protein kinase B/Akt activation. (PMID:12686550)
- Overexpression of integrin-linked kinase is associated with sporadic human colon cancer (PMID:12771992)
- Cell adhesion to the extracellular matrix protein fibronectin modulates radiation-dependent G2 phase arrest and involve this enzyme in vitro. (PMID:12778079)
- ILK has a role in oncogenic transformation and progression to invasive and metastatic phenotypes [review] (PMID:12884912)
- ILK is a critical mediator for tubular EMT and likely plays a crucial role in the pathogenesis of chronic renal fibrosis (PMID:12925691)
- ILK kinase activity, or expression, results in the inhibition of cell attachment, cell migration, F-actin organization (PMID:12960424)
- PINCH1 and ILK are essential for prompt cell spreading and motility; PINCH1 and ILK, like alpha-parvin, are crucial for cell survival; PINCH1 and ILK are required for optimal activating phosphorylation of PKB/Akt of the survival pathway (PMID:14551191)
- Increased expression of integrin-linked kinase is correlated with melanoma progression (PMID:14555513)
- integrin-lined kinase plays an important role in vascular morphogenesis (PMID:14679308)
- essential role of ILK in two key aspects of tumor angiogenesis: VEGF expression by tumor cells and VEGF-stimulated blood vessel formation (PMID:14749128)
- Taken together, these data suggest that PI3K-ILK-Akt pathway that is independent of the TGFbeta-induced Smad pathway is required for TGFbeta-mediated epithelial to mesenchymal transition. (PMID:15044083)
- 59 kDa immunoreactive integrin-linked kinase is upreguated in the blood and peritoneal fluid of ovarian cancer patients before, but not after chemotherapy (PMID:15073119)
- ILK regulates alpha 2 beta 1 in HEL cells, is activated in platelets and associates with beta 1-integrins (PMID:15304053)
- Data provide evidence that ILK signaling modulates the cellular radiation response involving diverse signaling pathways and through changes in f-actin-based processes such as focal adhesion formation, cell adhesion, and spreading. (PMID:15313908)
- loss of ParvB expression is a novel mechanism for upregulating ILK activity in tumors (PMID:15467740)
- ILK overexpression protects vascular endothelium cells and progenitor cells from anchorage- or nutrient-deprived stress and enhances neovascularization (PMID:15802621)
- Finding suggests that therapies directed against ILK and its downstream signaling targets may have the potential to enhance the efficacy of gemcitabine-based chemotherapy. (PMID:15867245)
- Dissociation of ILK from Hsp90 shortened its half-life by promoting proteasome-dependent degradation (PMID:15882985)
- matrix-derived mechanical forces sensed by beta1 integrin are capable of modulating ILK activity which regulates fibroblast viability via an Akt-dependent mechanism (PMID:15905178)
- Strong expression of ILK in cancerous tissues is involved with aggressive capability in pancreatic cancer. (PMID:16407822)
- ILK is a critical effector in a signaling pathway necessary for granule cell proliferation and cerebellar development. (PMID:16421303)
- ILK may act as a pro-survival factor and play a role in protecting mesangial cells from hyperglycaemic osmotic stress (PMID:16611685)
- functions as a downstream mediator of the ET-1/ET(A)R axis to potentiate aggressive cellular behavior in ovarian cancer cells. (PMID:16648553)
- ILK activity can modulate acute Wnt3a mediated beta-catenin phosphorylation, stabilization and nuclear activation in a PI3K-independent manner. (PMID:16799642)
- Endogenous ILK is a novel and physiological upstream responder of numerous intracellular molecules involved in hypoxic stress in endothelial cellss and may control the recruitment of peogenitor cells to ischemic tissue. (PMID:16818815)
- ILK may participate in invasion and metastasis of laryngeal squamous cell carcinoma. (PMID:16836071)
- Review highlights the role of integrin-linked kinase (ILK) as a novel component of the cardiac mechanical stretch sensor. (PMID:16951248)
- Cell adhesion and/or its related molecular basis regulate epigenetic mechanisms leading to a loss of ILK transcription, which in turn regulates cell adhesion property in a feedback linkage. (PMID:16987993)
- R-Ras and ILK have roles upstream of GSK-3beta in the regulation of neuronal polarity (PMID:17107957)
- Identification of ILK as a player in hypoxia survival signaling employed by cancer cells further validates ILK as a unique target for cancer therapy. (PMID:17143519)
- This study suggests that ILK serves as a key mediator in TGFbeta1 regulation of uPA/PAI-1 system critical for the invasiveness of human ovarian cancer cells. And ILK is a potential target for cancer therapy. (PMID:17187779)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ilk | ENSDARG00000056964 |
| mus_musculus | Ilk | ENSMUSG00000030890 |
| rattus_norvegicus | Ilk | ENSRNOG00000018993 |
| drosophila_melanogaster | Ilk | FBGN0028427 |
| caenorhabditis_elegans | WBGENE00003931 |
Paralogs (23): MAP3K9 (ENSG00000006432), TESK2 (ENSG00000070759), MAP3K13 (ENSG00000073803), ARAF (ENSG00000078061), MAP3K20 (ENSG00000091436), RIPK2 (ENSG00000104312), LIMK1 (ENSG00000106683), TESK1 (ENSG00000107140), TNNI3K (ENSG00000116783), RIPK3 (ENSG00000129465), MAP3K10 (ENSG00000130758), RAF1 (ENSG00000132155), RIPK1 (ENSG00000137275), MAP3K12 (ENSG00000139625), KSR1 (ENSG00000141068), MAP3K21 (ENSG00000143674), BRAF (ENSG00000157764), MLKL (ENSG00000168404), KSR2 (ENSG00000171435), MOS (ENSG00000172680), MAP3K11 (ENSG00000173327), LIMK2 (ENSG00000182541), LRRK2 (ENSG00000188906)
Protein
Protein identifiers
Scaffold protein ILK — Q13418 (reviewed: Q13418)
Alternative names: ILK-1, ILK-2, Inactive integrin-linked kinase, p59ILK
All UniProt accessions (6): A0A087WW45, A0A087WWY6, Q13418, A0A0A0MTH3, E9PQ52, V9HWF0
UniProt curated annotations — full annotation on UniProt →
Function. Scaffold protein which mediates protein-protein interactions during a range of cellular events including focal adhesion assembly, cell adhesion and cell migration. Regulates integrin-mediated signal transduction by contributing to inside-out integrin activation. Recruits PARVA and LIMS1/PITCH to form the heterotrimeric IPP (ILK-PINCH-PARVIN) complex which binds to F-actin via the C-terminal tail of LIMS1 and the N-terminal region of PARVA, promoting F-actin filament bundling, a process required to generate force for actin cytoskeleton reorganization and subsequent dynamic cell adhesion events such as cell spreading and migration. Binding to PARVA promotes effective assembly of ILK into focal adhesions while PARVA-bound ILK can simultaneously engage integrin-beta cytoplasmic tails to mediate cell adhesion. Plays a role with PARVG in promoting the cell adhesion and spreading of leukocytes. Acts as an upstream effector of both AKT1/PKB and GSK3. Mediates trafficking of caveolae to the cell surface in an ITGB1-dependent manner by promoting the recruitment of IQGAP1 to the cell cortex which cooperates with its effector DIAPH1 to locally stabilize microtubules and allow stable insertion of caveolae into the plasma membrane. Required for the maintenance of mitotic spindle integrity by promoting phosphorylation of TACC3 by AURKA. Associates with chromatin and may act as a negative regulator of transcription when located in the nucleus.
Subunit / interactions. Component of the heterotrimeric IPP (ILK-PINCH-PARVIN) complex composed of ILK, LIMS1/PINCH and PARVA; the complex binds to F-actin via the C-terminal tail of LIMS1 and the N-terminal region of PARVA, promoting F-actin filament bundling. Formation of the IPP complex is dependent on protein kinase C and precedes integrin-mediated cell adhesion and spreading. ILK also interacts with LIMS2/PINCH2 and with PARVB and PARVG which may substitute for LIMS1 and PARVA in the IPP complex; PARVA and PARVB compete for the same binding site. Interaction with PARVG promotes the establishment of cell polarity required for leukocyte migration. Interacts with the cytoplasmic domain of integrin ITGB1 and may also interact with integrins ITGB2, ITGB3 and/or ITGB5. Interacts probably also with TGFB1I1. Interacts (via ANK repeats) with EPHA1 (via SAM domain); stimulated by EFNA1 but independent of the kinase activity of EPHA1. Interacts with FERMT2. Interacts with LIMD2; leading to activate the protein kinase activity. Interacts with PXN/PAXILLIN (via LD motif 4). Interacts with CCDC25 (via cytoplasmic region); initiating the ILK-PARVB cascade to induce cytoskeleton rearrangement and directional migration of cells. Interacts with IQGAP1; the interaction is required for localization of IQGAP1 to the cell cortex.
Subcellular location. Cell junction. Focal adhesion. Cell membrane. Cell projection. Lamellipodium. Cytoplasm. Myofibril. Sarcomere. Nucleus. Cytoskeleton. Microtubule organizing center. Centrosome. Cell cortex.
Tissue specificity. Highly expressed in heart followed by skeletal muscle, pancreas and kidney. Weakly expressed in placenta, lung and liver.
Post-translational modifications. Phosphorylation by PAK1 modulates ILK subcellular location by promoting its nuclear export.
Domain organisation. The kinase domain is likely to have lost catalytic activity but retains ATP-binding activity. ATP structurally stabilizes the kinase domain and promotes stability of binding to PARVA as well as focal adhesion stability. The PH-like region is not required for assembly of the IPP complex or for localization of ILK to focal adhesions.
Similarity. Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q13418-1 | 1 | yes |
| Q13418-2 | 2 | |
| Q13418-3 | 3 |
RefSeq proteins (5): NP_001014794, NP_001014795, NP_001265370, NP_001265371, NP_004508* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000719 | Prot_kinase_dom | Domain |
| IPR001245 | Ser-Thr/Tyr_kinase_cat_dom | Domain |
| IPR002110 | Ankyrin_rpt | Repeat |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR035692 | PK_ILK | Domain |
| IPR036770 | Ankyrin_rpt-contain_sf | Homologous_superfamily |
| IPR051681 | Ser/Thr_Kinases-Pseudokinases | Family |
Pfam: PF07714, PF12796
Enzyme classification (BRENDA):
- EC 2.7.10.2 — non-specific protein-tyrosine kinase (BRENDA: 41 organisms, 396 substrates, 479 inhibitors, 43 Km, 32 kcat entries)
Substrate kinetics (BRENDA)
6 substrates with measured Km, best-characterized 6. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| ATP | 0.014–17.64 | 12 |
| [KDSRC KINASE]-L-TYROSINE | 0.0057–0.24 | 12 |
| POLY(GLU4-TYR) | 0.018–0.659 | 10 |
| EEEEYIQ[DP]-8-HYDROXY-5-(N,N-DIMETHYLSULFONAMIDO | 0.057 | 1 |
| S1 PEPTIDE | 0.037 | 1 |
| EEEEY | — | 0 |
UniProt features (80 total): helix 25, mutagenesis site 13, strand 11, binding site 10, repeat 5, modified residue 5, turn 3, splice variant 2, region of interest 2, chain 1, sequence variant 1, domain 1, short sequence motif 1
Structure
Experimental structures (PDB)
17 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 4HI8 | X-RAY DIFFRACTION | 1.2 |
| 4HI9 | X-RAY DIFFRACTION | 1.2 |
| 9TP9 | X-RAY DIFFRACTION | 1.45 |
| 9D5E | X-RAY DIFFRACTION | 1.5 |
| 9D5F | X-RAY DIFFRACTION | 1.5 |
| 9D5H | X-RAY DIFFRACTION | 1.5 |
| 9D5I | X-RAY DIFFRACTION | 1.5 |
| 9D5P | X-RAY DIFFRACTION | 1.5 |
| 9TPD | X-RAY DIFFRACTION | 1.5 |
| 9D5G | X-RAY DIFFRACTION | 1.55 |
| 3F6Q | X-RAY DIFFRACTION | 1.6 |
| 3KMU | X-RAY DIFFRACTION | 1.8 |
| 3REP | X-RAY DIFFRACTION | 1.8 |
| 6MIB | X-RAY DIFFRACTION | 1.8 |
| 3IXE | X-RAY DIFFRACTION | 1.9 |
| 3KMW | X-RAY DIFFRACTION | 2 |
| 2KBX | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q13418-F1 | 88.13 | 0.62 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (10): 200; 202; 203; 204; 220; 270; 272; 279; 339; 341
Post-translational modifications (5): 1, 173, 186, 246, 426
Mutagenesis-validated functional residues (13):
| Position | Phenotype |
|---|---|
| 31 | loss of interaction with lims1 and loss of localization to focal adhesions. |
| 99 | alters interaction with lims1. |
| 173 | severely reduces pak1-mediated phosphorylation and increases nuclear localization. reduced cell proliferation and cell m |
| 181 | no effect on pak1-mediated phosphorylation. |
| 207 | prevents binding of atp and mg(2+). does not affect binding to f-actin but dramatically impairs f-actin filament bundlin |
| 220 | reduced interaction with parva due to destabilization of ilk. |
| 225 | reduced interaction with parva. decreased focal adhesion assembly and reduced cell migration; when associated with a-349 |
| 228 | no effect on pak1-mediated phosphorylation. |
| 246 | severely reduces pak1-mediated phosphorylation and increases nuclear and focal adhesion localization. reduced cell proli |
| 349 | reduced interaction with parva. decreased focal adhesion assembly and reduced cell migration; when associated with a-225 |
| 363 | remains almost completely cytoplasmic with little nuclear localization. |
| 400 | results in nuclear accumulation of the protein and altered cell morphology. |
| 402–403 | abolishes binding to parva and impairs localization of ilk to focal adhesions. |
Function
Pathways and Gene Ontology
Reactome pathways
2 pathways
| ID | Pathway |
|---|---|
| R-HSA-446343 | Localization of the PINCH-ILK-PARVIN complex to focal adhesions |
| R-HSA-446353 | Cell-extracellular matrix interactions |
MSigDB gene sets: 295 (showing top):
GOBP_MORPHOGENESIS_OF_AN_EPITHELIUM, BIOCARTA_PTEN_PATHWAY, GOBP_REGULATION_OF_CELLULAR_RESPONSE_TO_GROWTH_FACTOR_STIMULUS, GOBP_EPITHELIUM_DEVELOPMENT, GOBP_ACTIN_FILAMENT_BUNDLE_ORGANIZATION, GOBP_ESTABLISHMENT_OR_MAINTENANCE_OF_CELL_POLARITY, GOBP_RESPONSE_TO_PEPTIDE, GOBP_MEMBRANE_BIOGENESIS, GOBP_PLATELET_ACTIVATION, GOBP_CANONICAL_NF_KAPPAB_SIGNAL_TRANSDUCTION, GOBP_PLASMA_MEMBRANE_ORGANIZATION, GOBP_GLIAL_CELL_DEVELOPMENT, HSIAO_HOUSEKEEPING_GENES, GOBP_OSTEOBLAST_DIFFERENTIATION, GOBP_NEUROGENESIS
GO Biological Process (32): cell morphogenesis (GO:0000902), branching involved in ureteric bud morphogenesis (GO:0001658), outflow tract morphogenesis (GO:0003151), mitotic spindle organization (GO:0007052), cell-matrix adhesion (GO:0007160), integrin-mediated signaling pathway (GO:0007229), positive regulation of cell population proliferation (GO:0008284), positive regulation of signal transduction (GO:0009967), fibroblast migration (GO:0010761), nerve development (GO:0021675), myelination in peripheral nervous system (GO:0022011), cell projection organization (GO:0030030), cell differentiation (GO:0030154), positive regulation of BMP signaling pathway (GO:0030513), tumor necrosis factor-mediated signaling pathway (GO:0033209), substrate adhesion-dependent cell spreading (GO:0034446), positive regulation of canonical NF-kappaB signal transduction (GO:0043123), phosphatidylinositol 3-kinase/protein kinase B signal transduction (GO:0043491), establishment or maintenance of epithelial cell apical/basal polarity (GO:0045197), positive regulation of osteoblast differentiation (GO:0045669), positive regulation of DNA-templated transcription (GO:0045893), neural precursor cell proliferation (GO:0061351), platelet aggregation (GO:0070527), caveola assembly (GO:0070836), protein localization to cell cortex (GO:0072697), positive regulation of canonical Wnt signaling pathway (GO:0090263), positive regulation of substrate adhesion-dependent cell spreading (GO:1900026), negative regulation of neural precursor cell proliferation (GO:2000178), protein phosphorylation (GO:0006468), cell population proliferation (GO:0008283), anatomical structure morphogenesis (GO:0009653), Schwann cell development (GO:0014044)
GO Molecular Function (10): magnesium ion binding (GO:0000287), protein kinase activity (GO:0004672), signaling receptor binding (GO:0005102), integrin binding (GO:0005178), ATP binding (GO:0005524), protein kinase binding (GO:0019901), protein-macromolecule adaptor activity (GO:0030674), nucleotide binding (GO:0000166), protein binding (GO:0005515), metal ion binding (GO:0046872)
GO Cellular Component (16): chromatin (GO:0000785), nucleus (GO:0005634), nucleoplasm (GO:0005654), cytoplasm (GO:0005737), centrosome (GO:0005813), cytosol (GO:0005829), plasma membrane (GO:0005886), focal adhesion (GO:0005925), cell cortex (GO:0005938), actin cytoskeleton (GO:0015629), membrane (GO:0016020), sarcomere (GO:0030017), lamellipodium (GO:0030027), cytoskeleton (GO:0005856), cell projection (GO:0042995), anchoring junction (GO:0070161)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Cell-extracellular matrix interactions | 1 |
| Cell junction organization | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 7 |
| anatomical structure morphogenesis | 2 |
| cell-substrate adhesion | 2 |
| protein binding | 2 |
| cytoplasm | 2 |
| cell periphery | 2 |
| branching morphogenesis of an epithelial tube | 1 |
| ureteric bud morphogenesis | 1 |
| heart morphogenesis | 1 |
| mitotic cell cycle | 1 |
| spindle organization | 1 |
| microtubule cytoskeleton organization involved in mitosis | 1 |
| cell surface receptor signaling pathway | 1 |
| cell population proliferation | 1 |
| regulation of cell population proliferation | 1 |
| positive regulation of cellular process | 1 |
| signal transduction | 1 |
| regulation of signal transduction | 1 |
| positive regulation of cell communication | 1 |
| positive regulation of signaling | 1 |
| positive regulation of response to stimulus | 1 |
| ameboidal-type cell migration | 1 |
| nervous system development | 1 |
| anatomical structure development | 1 |
| Schwann cell development | 1 |
| peripheral nervous system axon ensheathment | 1 |
| myelination | 1 |
| cellular component organization | 1 |
| cellular developmental process | 1 |
| BMP signaling pathway | 1 |
| regulation of BMP signaling pathway | 1 |
| positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway | 1 |
| cytokine-mediated signaling pathway | 1 |
| cellular response to tumor necrosis factor | 1 |
| canonical NF-kappaB signal transduction | 1 |
| regulation of canonical NF-kappaB signal transduction | 1 |
| positive regulation of intracellular signal transduction | 1 |
| intracellular signaling cassette | 1 |
| establishment or maintenance of apical/basal cell polarity | 1 |
| osteoblast differentiation | 1 |
Protein interactions and networks
STRING
0 interactions, top by confidence (×1000):
IntAct
212 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| ILK | PARVA | psi-mi:“MI:0915”(physical association) | 0.970 |
| RICTOR | MTOR | psi-mi:“MI:0914”(association) | 0.970 |
| PARVA | ILK | psi-mi:“MI:0915”(physical association) | 0.970 |
| LIMS1 | ILK | psi-mi:“MI:0915”(physical association) | 0.960 |
| ILK | LIMS1 | psi-mi:“MI:0407”(direct interaction) | 0.960 |
| ILK | LIMS1 | psi-mi:“MI:0914”(association) | 0.960 |
| ILK | LIMS1 | psi-mi:“MI:0915”(physical association) | 0.960 |
| LIMS1 | ILK | psi-mi:“MI:0914”(association) | 0.960 |
| ILK | PARVG | psi-mi:“MI:0915”(physical association) | 0.900 |
| PARVG | ILK | psi-mi:“MI:0915”(physical association) | 0.900 |
| RSU1 | LIMS1 | psi-mi:“MI:0914”(association) | 0.850 |
| TRIM27 | ILK | psi-mi:“MI:0915”(physical association) | 0.670 |
| ILK | TRIM27 | psi-mi:“MI:0915”(physical association) | 0.670 |
BioGRID (495): RICTOR (Affinity Capture-MS), RICTOR (Affinity Capture-Western), ILK (Affinity Capture-Western), ILK (Affinity Capture-Western), RICTOR (Two-hybrid), ITGB1 (Two-hybrid), AKT1 (Affinity Capture-Western), TRIM27 (Two-hybrid), PARVA (Two-hybrid), PARVG (Two-hybrid), ILK (Affinity Capture-RNA), ILK (Affinity Capture-RNA), ILK (Affinity Capture-RNA), ABCF2 (Affinity Capture-MS), ADNP (Affinity Capture-MS)
ESM2 similar proteins: A2XFF4, A8XWC4, B8BBT7, F4IS56, O08680, O22558, O44997, O55222, O74536, P29318, P29319, P29320, P34208, P53355, P53356, P54645, P54646, P54758, P57044, Q02111, Q02723, Q09137, Q13131, Q13418, Q28948, Q2MHE4, Q2QXC6, Q3SWY2, Q54Y55, Q5EG47, Q5R5V4, Q5RD00, Q5RDH5, Q60629, Q61RA2, Q62413, Q80YE7, Q852Q0, Q852Q1, Q8BRK8
Diamond homologs: A0A509AIU5, A7E3S4, D3ZG83, O01700, O19004, O55222, P00532, P04049, P04627, P05625, P06782, P09560, P10398, P10533, P11345, P14056, P15056, P18160, P18161, P27636, P27966, P28028, P34908, P57044, P80192, P83104, Q00372, Q02779, Q04982, Q13418, Q1ZXD6, Q3SWY2, Q3U1V8, Q54H45, Q54H46, Q54JC7, Q54R58, Q54TA1, Q54TM7, Q54XY6
SIGNOR signaling
28 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| ILK | “up-regulates activity” | PPP1R14C | phosphorylation |
| ILK | “up-regulates activity” | MYL12B | phosphorylation |
| PXN | up-regulates | ILK | binding |
| ILK | “up-regulates activity” | ILK | phosphorylation |
| ILK | up-regulates | NACA | phosphorylation |
| PAK1 | up-regulates | ILK | phosphorylation |
| ILK | down-regulates | CFL1 | phosphorylation |
| ILK | up-regulates | AKT1 | phosphorylation |
| TWIST2 | “down-regulates quantity by repression” | ILK | “transcriptional regulation” |
| TWIST1 | “down-regulates quantity by repression” | ILK | “transcriptional regulation” |
| ILK | “down-regulates activity” | GSK3B | phosphorylation |
| ILK | “up-regulates activity” | PARVB | phosphorylation |
| ILK | “up-regulates activity” | AKT2 | phosphorylation |
| ILK | “up-regulates activity” | SYNPO2 | phosphorylation |
| ILK | up-regulates | AKT | phosphorylation |
| ILK | down-regulates | PPP1R12A | phosphorylation |
| ILK | “up-regulates activity” | PPP1R14A | phosphorylation |
| ILK | “up-regulates activity” | AKT | phosphorylation |
| ILK | “up-regulates activity” | AKT1 | phosphorylation |
| ILK | “down-regulates activity” | PPP1R12A | phosphorylation |
| ILK | “up-regulates activity” | PPP1R14B | phosphorylation |
| ILK | “form complex” | “IPP complex” | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 140 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Intrinsic Pathway for Apoptosis | 7 | 20.9× | 1e-05 |
| HSF1-dependent transactivation | 5 | 16.2× | 1e-03 |
| Apoptosis | 7 | 12.0× | 3e-04 |
| Programmed Cell Death | 7 | 10.5× | 6e-04 |
| Regulation of HSF1-mediated heat shock response | 7 | 9.9× | 7e-04 |
| Regulation of actin dynamics for phagocytic cup formation | 5 | 9.4× | 6e-03 |
| Transcriptional and post-translational regulation of MITF-M expression and activity | 5 | 9.1× | 6e-03 |
| Toll Like Receptor TLR6:TLR2 Cascade | 5 | 9.0× | 6e-03 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| substrate adhesion-dependent cell spreading | 6 | 16.1× | 1e-03 |
| endothelial cell migration | 5 | 16.1× | 3e-03 |
| response to unfolded protein | 5 | 11.8× | 8e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
359 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 178 |
| Likely benign | 151 |
| Benign | 9 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1856 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 11:6604358:GGG:G | donor_gain | 1.0000 |
| 11:6604359:GGG:G | donor_gain | 1.0000 |
| 11:6608072:ACT:A | acceptor_gain | 1.0000 |
| 11:6608072:ACTG:A | acceptor_gain | 1.0000 |
| 11:6608374:T:A | acceptor_gain | 1.0000 |
| 11:6608378:T:TA | acceptor_gain | 1.0000 |
| 11:6608379:G:A | acceptor_gain | 1.0000 |
| 11:6608383:A:AG | acceptor_gain | 1.0000 |
| 11:6608383:AT:A | acceptor_gain | 1.0000 |
| 11:6608383:ATG:A | acceptor_gain | 1.0000 |
| 11:6608383:ATGG:A | acceptor_gain | 1.0000 |
| 11:6608383:ATGGG:A | acceptor_gain | 1.0000 |
| 11:6608384:T:G | acceptor_gain | 1.0000 |
| 11:6608384:T:TA | acceptor_gain | 1.0000 |
| 11:6608385:G:A | acceptor_gain | 1.0000 |
| 11:6608393:GCT:G | acceptor_gain | 1.0000 |
| 11:6608487:GAG:G | donor_gain | 1.0000 |
| 11:6608488:AG:A | donor_gain | 1.0000 |
| 11:6608489:GG:G | donor_gain | 1.0000 |
| 11:6608490:G:C | donor_loss | 1.0000 |
| 11:6608490:G:GG | donor_gain | 1.0000 |
| 11:6608963:GCCCC:G | donor_gain | 1.0000 |
| 11:6608965:CCCG:C | donor_loss | 1.0000 |
| 11:6608966:CC:C | donor_gain | 1.0000 |
| 11:6608966:CCGT:C | donor_loss | 1.0000 |
| 11:6608967:CGTGA:C | donor_loss | 1.0000 |
| 11:6608968:G:GG | donor_gain | 1.0000 |
| 11:6608968:GTGAG:G | donor_loss | 1.0000 |
| 11:6608969:T:G | donor_loss | 1.0000 |
| 11:6608970:G:GG | donor_loss | 1.0000 |
AlphaMissense
0 scored. Top likely-pathogenic:
dbSNP variants (sampled 300 via entrez): RS1000443308 (11:6607580 C>A,G,T), RS1000835819 (11:6603746 G>C,T), RS1001394474 (11:6603883 G>A), RS1001645031 (11:6607961 G>C,T), RS1001718645 (11:6608272 A>C), RS1001828815 (11:6603228 C>T), RS1002070165 (11:6603039 T>C), RS1002721805 (11:6609741 A>G), RS1003234445 (11:6604122 C>G,T), RS1003237073 (11:6604717 A>G), RS1003404417 (11:6611182 C>CT), RS1003732256 (11:6611105 G>A,C), RS1003791517 (11:6605096 T>C,G), RS1003875386 (11:6604525 G>C,T), RS1003900254 (11:6606731 A>G)
Disease associations
OMIM: gene MIM:602366 | disease phenotypes: MIM:192600, MIM:256730
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| dilated cardiomyopathy | Limited | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| dilated cardiomyopathy | Limited | AD |
Mondo (5): familial hypertrophic cardiomyopathy (MONDO:0024573), neuronal ceroid lipofuscinosis (MONDO:0016295), cardiomyopathy (MONDO:0004994), long QT syndrome (MONDO:0002442), dilated cardiomyopathy (MONDO:0005021)
Orphanet (6): Rare familial disorder with hypertrophic cardiomyopathy (Orphanet:99739), Neuronal ceroid lipofuscinosis (Orphanet:216), OBSOLETE: Infantile neuronal ceroid lipofuscinosis (Orphanet:79263), Rare cardiomyopathy (Orphanet:167848), Dilated cardiomyopathy (Orphanet:217604), NON RARE IN EUROPE: Familial isolated hypertrophic cardiomyopathy (Orphanet:155)
HPO phenotypes
1 total (1 of 1 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0001644 | Dilated cardiomyopathy |
GWAS associations
3 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST010725_20 | Malaria | 4.000000e-69 |
| GCST010725_33 | Malaria | 2.000000e-67 |
| GCST010725_51 | Malaria | 1.000000e-55 |
MeSH disease descriptors (4)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D009202 | Cardiomyopathies | C14.280.238 |
| D002311 | Cardiomyopathy, Dilated | C14.280.195.160; C14.280.238.070; C16.320.488.750 |
| D024741 | Cardiomyopathy, Hypertrophic, Familial | C14.280.238.100.500; C14.280.484.048.750.070.160.500; C16.320.160 |
| D008133 | Long QT Syndrome | C14.280.067.565; C14.280.123.625; C16.131.240.400.715; C23.550.073.547 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL5247 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
4 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 150,373 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL255863 | NILOTINIB | 4 | 38,627 |
| CHEMBL553 | ERLOTINIB | 4 | 108,300 |
| CHEMBL2105728 | CRENOLANIB | 3 | 2,167 |
| CHEMBL2079588 | TELATINIB | 2 | 1,279 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — ILK subfamily
Most potent curated ligand interactions (1 total), top 1:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| compound 22 [PMID: 21823616] | Inhibition | 6.22 | pIC50 |
Binding affinities (BindingDB)
151 measured of 151 human assays (151 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-5-fluoro-1,3-benzothiazole-6-sulfonamide | IC50 | 7 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-1,3-benzothiazole-6-sulfonamide | IC50 | 10 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 5-(3-aminopropyl)-4-(1,3-benzothiazol-2-yl)-1H-pyrazol-3-amine | IC50 | 10 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(5-amino-1H-pyrazol-4-yl)-5-fluoro-1,3-benzothiazole-6-sulfonamide | IC50 | 20 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(1,3-benzothiazol-2-yl)-5-[3-(methylamino)propyl]-1H-pyrazol-3-amine | IC50 | 20 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 3-N-(2-aminoethyl)-4-(1,3-benzothiazol-2-yl)-1H-pyrazole-3,5-diamine | IC50 | 20 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-5-fluoro-N-methyl-1,3-benzothiazole-6-sulfonamide | IC50 | 40 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-4-fluoro-1,3-benzothiazole-6-sulfonamide | IC50 | 40 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-N-(pyridin-4-ylmethyl)-1,3-benzothiazole-6-sulfonamide | IC50 | 40 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(5-fluoro-6-methoxy-1,3-benzothiazol-2-yl)-5-(furan-2-yl)-1H-pyrazol-3-amine | IC50 | 40 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(5-fluoro-1,3-benzothiazol-2-yl)-5-methyl-1H-pyrazol-3-amine | IC50 | 40 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-5-fluoro-N-(2-hydroxyethyl)-1,3-benzothiazole-6-sulfonamide | IC50 | 50 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(3-amino-5-pyridin-4-yl-1H-pyrazol-4-yl)-1,3-benzothiazole-6-sulfonamide | IC50 | 50 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(5-fluoro-6-methyl-1,3-benzothiazol-2-yl)-1H-pyrazol-5-amine | IC50 | 50 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| methyl 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-5-fluoro-1,3-benzothiazole-6-carboxylate | IC50 | 60 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(5-amino-1H-pyrazol-4-yl)-N-methyl-1,3-benzothiazole-6-sulfonamide | IC50 | 60 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(5-fluoro-6-methoxy-1,3-benzothiazol-2-yl)-5-methyl-1H-pyrazol-3-amine | IC50 | 60 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(1,3-benzothiazol-2-yl)-5-piperidin-4-yl-1H-pyrazol-3-amine | IC50 | 60 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-4,5,6-trifluoro-1,3-benzothiazole-7-sulfonamide | IC50 | 70 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-N-methyl-1,3-benzothiazole-6-sulfonamide | IC50 | 70 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(5-fluoro-6-methoxy-1,3-benzothiazol-2-yl)-3-piperazin-1-yl-1H-pyrazol-5-amine | IC50 | 70 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-N-(2,2,2-trifluoroethyl)-1,3-benzothiazole-6-sulfonamide | IC50 | 90 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| [2-(3-amino-5-methyl-1H-pyrazol-4-yl)-5-fluoro-1,3-benzothiazol-6-yl]methanol | IC50 | 100 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-[[2-(3-amino-5-methyl-1H-pyrazol-4-yl)-1,3-benzothiazol-6-yl]methylamino]ethanol | IC50 | 100 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(5-fluoro-6-methoxy-1,3-benzothiazol-2-yl)-5-(1,2-oxazol-5-yl)-1H-pyrazol-3-amine | IC50 | 100 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(1,3-benzothiazol-2-yl)-5-[4-(methylamino)butyl]-1H-pyrazol-3-amine | IC50 | 100 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(1,3-benzothiazol-2-yl)-5-(furan-2-yl)-1H-pyrazol-3-amine | IC50 | 100 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(1,3-benzothiazol-2-yl)-5-pyridin-4-yl-1H-pyrazol-3-amine | IC50 | 100 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 5-(4-aminophenyl)-4-(1,3-benzothiazol-2-yl)-1H-pyrazol-3-amine | IC50 | 100 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-5-fluoro-N-(pyridin-4-ylmethyl)-1,3-benzothiazole-6-sulfonamide | IC50 | 130 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-5-fluoro-N-(2-hydroxyethyl)-1,3-benzothiazole-4-sulfonamide | IC50 | 150 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(1,3-benzothiazol-2-yl)-3-N-[2-(ethylamino)ethyl]-1H-pyrazole-3,5-diamine | IC50 | 150 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(1,3-benzothiazol-2-yl)-3-piperazin-1-yl-1H-pyrazol-5-amine | IC50 | 190 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(1,3-benzothiazol-2-yl)-N-[2-(1H-imidazol-5-yl)ethyl]-1H-pyrazol-5-amine | IC50 | 200 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-1,3-benzothiazol-5-ol | IC50 | 200 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-N-(2-hydroxyethyl)-1,3-benzothiazole-6-sulfonamide | IC50 | 200 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-N-[2-(4-aminophenyl)ethyl]-1,3-benzothiazole-6-sulfonamide | IC50 | 200 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-N-[2-(1H-imidazol-5-yl)ethyl]-1,3-benzothiazole-6-sulfonamide | IC50 | 200 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 3-[3-amino-4-(1,3-benzothiazol-2-yl)-1H-pyrazol-5-yl]propan-1-ol | IC50 | 200 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(5-fluoro-6-methoxy-1,3-benzothiazol-2-yl)-5-pyridin-4-yl-1H-pyrazol-3-amine | IC50 | 200 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(5-fluoro-6-methoxy-1,3-benzothiazol-2-yl)-3-N-[2-(1H-imidazol-5-yl)ethyl]-1H-pyrazole-3,5-diamine | IC50 | 200 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(6-bromo-5-fluoro-1,3-benzothiazol-2-yl)-5-methyl-1H-pyrazol-3-amine | IC50 | 200 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-[6-[(dimethylamino)methyl]-1,3-benzothiazol-2-yl]-5-methyl-1H-pyrazol-3-amine | IC50 | 200 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(6-fluoro-1,3-benzothiazol-2-yl)-1H-pyrazol-5-amine | IC50 | 200 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(6-methoxy-1,3-benzothiazol-2-yl)-3-piperazin-1-yl-1H-pyrazol-5-amine | IC50 | 200 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 4-(1,3-benzothiazol-2-yl)-5-[3-(dimethylamino)propyl]-1H-pyrazol-3-amine | IC50 | 200 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 5-methyl-4-(4,5,6-trifluoro-1,3-benzothiazol-2-yl)-1H-pyrazol-3-amine | IC50 | 200 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 3-N-[3-(dimethylamino)propyl]-4-(5-fluoro-6-methoxy-1,3-benzothiazol-2-yl)-1H-pyrazole-3,5-diamine | IC50 | 200 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| methyl 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-1,3-benzothiazole-6-carboxylate | IC50 | 300 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
| 2-(3-amino-5-methyl-1H-pyrazol-4-yl)-1,3-benzothiazole-6-carboxamide | IC50 | 300 nM | US-8754233: Pyrazolylbenzothiazole derivatives and their use as therapeutic agents |
ChEMBL bioactivities
319 potent at pChembl≥5 of 327 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 8.15 | IC50 | 7 | nM | CHEMBL3681007 |
| 8.00 | IC50 | 10 | nM | CHEMBL3681013 |
| 8.00 | IC50 | 10 | nM | CHEMBL3685712 |
| 7.70 | IC50 | 20 | nM | CHEMBL3685682 |
| 7.70 | IC50 | 20 | nM | CHEMBL3685727 |
| 7.70 | IC50 | 20 | nM | CHEMBL3639798 |
| 7.70 | Kd | 20 | nM | NILOTINIB |
| 7.52 | IC50 | 30 | nM | CHEMBL3732995 |
| 7.50 | Kd | 32 | nM | TELATINIB |
| 7.40 | IC50 | 40 | nM | CHEMBL3681027 |
| 7.40 | IC50 | 40 | nM | CHEMBL3681005 |
| 7.40 | IC50 | 40 | nM | CHEMBL3685661 |
| 7.40 | IC50 | 40 | nM | CHEMBL3685652 |
| 7.40 | IC50 | 40 | nM | CHEMBL3680995 |
| 7.30 | IC50 | 50 | nM | CHEMBL3685631 |
| 7.30 | IC50 | 50 | nM | CHEMBL3681008 |
| 7.30 | IC50 | 50 | nM | CHEMBL3685659 |
| 7.22 | IC50 | 60 | nM | CHEMBL3681004 |
| 7.22 | IC50 | 60 | nM | CHEMBL3685693 |
| 7.22 | IC50 | 60 | nM | CHEMBL3685654 |
| 7.22 | IC50 | 60 | nM | CHEMBL3680994 |
| 7.16 | IC50 | 70 | nM | CHEMBL3680998 |
| 7.16 | IC50 | 70 | nM | CHEMBL3685656 |
| 7.16 | IC50 | 70 | nM | CHEMBL3680993 |
| 7.05 | IC50 | 90 | nM | CHEMBL3681024 |
| 7.00 | IC50 | 100 | nM | CHEMBL3685634 |
| 7.00 | IC50 | 100 | nM | CHEMBL3685684 |
| 7.00 | IC50 | 100 | nM | CHEMBL3685688 |
| 7.00 | IC50 | 100 | nM | CHEMBL3685695 |
| 7.00 | IC50 | 100 | nM | CHEMBL3685653 |
| 7.00 | IC50 | 100 | nM | CHEMBL3685713 |
| 7.00 | IC50 | 100 | nM | CHEMBL3680988 |
| 6.89 | IC50 | 130 | nM | CHEMBL3681009 |
| 6.82 | IC50 | 150 | nM | CHEMBL3681006 |
| 6.82 | IC50 | 150 | nM | CHEMBL3685701 |
| 6.72 | IC50 | 190 | nM | CHEMBL3685692 |
| 6.70 | IC50 | 200 | nM | CHEMBL3685635 |
| 6.70 | IC50 | 200 | nM | CHEMBL3681025 |
| 6.70 | IC50 | 200 | nM | CHEMBL3681022 |
| 6.70 | IC50 | 200 | nM | CHEMBL3681014 |
| 6.70 | IC50 | 200 | nM | CHEMBL3681010 |
| 6.70 | IC50 | 200 | nM | CHEMBL3685681 |
| 6.70 | IC50 | 200 | nM | CHEMBL3685673 |
| 6.70 | IC50 | 200 | nM | CHEMBL3685669 |
| 6.70 | IC50 | 200 | nM | CHEMBL3685668 |
| 6.70 | IC50 | 200 | nM | CHEMBL3685664 |
| 6.70 | IC50 | 200 | nM | CHEMBL3685658 |
| 6.70 | IC50 | 200 | nM | CHEMBL3685657 |
| 6.70 | IC50 | 200 | nM | CHEMBL3685715 |
| 6.70 | IC50 | 200 | nM | CHEMBL3685729 |
PubChem BioAssay actives
6 with measured affinity, of 305 total; 6 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| Nilotinib | 1425024: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.0200 | uM |
| 4-[[4-(4-chloroanilino)furo[2,3-d]pyridazin-7-yl]oxymethyl]-N-methylpyridine-2-carboxamide | 1425024: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.0320 | uM |
| N-methyl-3-[1-(4-piperazin-1-ylphenyl)-5-[4-[4-(trifluoromethyl)phenyl]phenyl]pyrazol-3-yl]propanamide | 618889: Inhibition of human ILK activity assessed myelin basic protein phosphorylation by radiometric kinase assay in the presence of [gamma 32P]ATP | ic50 | 0.6000 | uM |
| 1-[2-[5-[(3-methyloxetan-3-yl)methoxy]benzimidazol-1-yl]quinolin-8-yl]piperidin-4-amine | 1425024: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 1.3290 | uM |
| 2,7,8-trimethyl-2-(4-methylpentyl)-3,4-dihydrochromene-6-sulfonamide | 1200635: Binding affinity to GST-tagged PH domain of ILK (unknown origin) by surface Plasmon resonance spectroscopy | kd | 6.2000 | uM |
| (2R)-2,7,8-trimethyl-2-(4-methylpentyl)-3,4-dihydrochromen-6-ol | 1200635: Binding affinity to GST-tagged PH domain of ILK (unknown origin) by surface Plasmon resonance spectroscopy | kd | 8.7000 | uM |
CTD chemical–gene interactions
56 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | affects binding, affects folding, decreases reaction, decreases expression, increases expression | 4 |
| Smoke | decreases expression, increases abundance, increases expression | 3 |
| 2,2’,4,4’-tetrabromodiphenyl ether | decreases expression, increases expression | 2 |
| bisphenol S | decreases methylation, increases expression | 2 |
| bisphenol AF | affects binding, affects folding, decreases reaction, increases expression | 2 |
| Aspirin | decreases activity, decreases expression | 2 |
| Estradiol | affects binding, increases reaction | 2 |
| Rotenone | decreases expression | 2 |
| FR900359 | decreases phosphorylation | 1 |
| bisphenol F | affects cotreatment, increases expression | 1 |
| pirinixic acid | affects binding, decreases expression, increases activity | 1 |
| sodium arsenite | decreases expression | 1 |
| cobaltous chloride | decreases expression | 1 |
| ethyl caffeate | affects expression | 1 |
| tamibarotene | increases expression | 1 |
| azoxystrobin | decreases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| K 7174 | increases expression | 1 |
| pyrimidifen | decreases expression | 1 |
| bisphenol B | increases expression | 1 |
| abrine | increases expression | 1 |
| pyrachlostrobin | decreases expression | 1 |
| pentabrominated diphenyl ether 100 | decreases expression | 1 |
| hexabrominated diphenyl ether 153 | decreases expression | 1 |
| picoxystrobin | decreases expression | 1 |
| N-methyl-3-(1-(4-(piperazin-1-yl)phenyl)-5-(4’-(trifluoromethyl)-(1,1’-biphenyl)-4-yl)-1H-pyrazol-3-yl)propanamide | decreases expression, decreases reaction, decreases phosphorylation | 1 |
| Temozolomide | decreases expression | 1 |
| Pioglitazone | decreases expression | 1 |
| Sunitinib | decreases expression | 1 |
| Acetaminophen | decreases expression | 1 |
ChEMBL screening assays
71 unique, capped per target: 71 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1244364 | Binding | Inhibition of ILK | Global target profile of the kinase inhibitor bosutinib in primary chronic myeloid leukemia cells. — Leukemia |
Cellosaurus cell lines
2 cell lines: 2 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_AW27 | K562 eGFP-ILK | Cancer cell line | Female |
| CVCL_SS50 | HAP1 ILK (-) | Cancer cell line | Male |
Clinical trials (associated diseases)
451 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00374465 | PHASE4 | UNKNOWN | Therapy With Verapamil or Carvedilol in Chronic Heart Failure |
| NCT01293903 | PHASE4 | COMPLETED | Study of Qiliqiangxin Capsule to Treat Dilated Cardiomyopathy |
| NCT01557140 | PHASE4 | COMPLETED | A Randomized Trial of Carvedilol in Chronic Chagas Cardiomyopathy |
| NCT01917149 | PHASE4 | COMPLETED | Supramaximal Titrated Inhibition of RAAS in Dilated Cardiomyopathy |
| NCT02115581 | PHASE4 | COMPLETED | Coenzyme Q10 Supplementation in Children With Idiopathic Dilated Cardiomyopathy |
| NCT06236022 | PHASE4 | RECRUITING | The Effects of Sirolimus in Patients With Dilated Cardiomyopathy Infected With Kaposi Sarcoma-associated Virus |
| NCT00348530 | PHASE4 | UNKNOWN | Carvedilol Versus Verapamil in Chronic Heart Failure Secondary to Non-Ischemic Cardiomyopathy |
| NCT00371891 | PHASE4 | COMPLETED | Ontario Multidetector Computed Tomographic (MDCT) Coronary Angiography Study (OMCAS) |
| NCT00401856 | PHASE4 | COMPLETED | CMR to Assess Fibrosis in Cardiomyopathy Using Eplerenone |
| NCT00559338 | PHASE4 | COMPLETED | Impact of Nesiritide Infusion for Decompensated Heart Failure in the Emergency Department |
| NCT00606775 | PHASE4 | UNKNOWN | The Preventive Efficacy of Carvedilol on Cardiac Dysfunction in Duchenne Muscular Dystrophy |
| NCT00658203 | PHASE4 | COMPLETED | Clinical Evaluation on Advanced Resynchronization |
| NCT00701220 | PHASE4 | COMPLETED | Statin Therapy for Ischemic and Nonischemic Cardiomyopathy |
| NCT00800761 | PHASE4 | COMPLETED | Intensive Combined Chelation Therapy for Iron-Induced Cardiac Disease in Patients With Thalassemia Major |
| NCT00806390 | PHASE4 | TERMINATED | Prevention of Anthracycline or Trastuzumab Induced Cardiomyopathy by Metoprolol |
| NCT01006473 | PHASE4 | COMPLETED | Exercise Training in Chagas Cardiomyopathy |
| NCT01261065 | PHASE4 | COMPLETED | Mechanisms of Improvement With Beta-Blocker Treatment in Heart Failure |
| NCT01345188 | PHASE4 | COMPLETED | Ranolazine in Ischemic Cardiomyopathy |
| NCT01868841 | PHASE4 | COMPLETED | 123-I mIBG (AdreView) Heart-to-Mediastinal (H/M) Ratio and SPECT Imaging on a Small Field of View-High Efficiency Cardiac SPECT System |
| NCT02640846 | PHASE4 | UNKNOWN | Effects of Levosimendan, Milrinone and Norepinephrine on Left and Right Ventricular Function in Septic Shock |
| NCT03228823 | PHASE4 | UNKNOWN | Prospective Assessment of Premature Ventricular Contractions Suppression in Cardiomyopathy(PAPS) |
| NCT04323852 | PHASE4 | COMPLETED | Can Vitamin D Reduce Heart Muscle Damage After Bypass Surgery? |
| NCT05034432 | PHASE4 | RECRUITING | The PIVATAL Study -Study of Ventricular Arrhythmia (VTA) Ablation in Left Ventricular Assist Device (LVAD) Patients |
| NCT05718128 | PHASE4 | RECRUITING | Clinical Study of Endocardial Myocardial Biopsy |
| NCT06964464 | PHASE4 | RECRUITING | Comparative Effectiveness of Carvedilol Versus Metoprolol Succinate in Heart Failure Patients With an Implantable Cardioverter Defibrillator |
| NCT00333827 | PHASE3 | COMPLETED | Cell Therapy In Dilated Cardiomyopathy |
| NCT00505154 | PHASE3 | COMPLETED | Effect of Rosuvastatin on Left Ventricular Remodeling |
| NCT01223703 | PHASE3 | COMPLETED | PUFAs and Left Ventricular Function in Heart Failure |
| NCT01583114 | PHASE3 | TERMINATED | PREclinical Mutation CARriers From Families With DIlated Cardiomyopathy and ACE Inhibitors |
| NCT01914081 | PHASE3 | UNKNOWN | Resveratrol: A Potential Anti- Remodeling Agent in Heart Failure, From Bench to Bedside |
| NCT02989181 | PHASE3 | UNKNOWN | Continues Positive Airway Pressure Treatment for Patients With Dilated Cardiomyopathy and Obstructive Sleep Apnea |
| NCT03439514 | PHASE3 | TERMINATED | A Study of ARRY-371797 (PF-07265803) in Patients With Symptomatic Dilated Cardiomyopathy Due to a Lamin A/C Gene Mutation |
| NCT05237323 | PHASE3 | COMPLETED | Micophenolate Mofetil Versus Azathioprine in Myocarditis |
| NCT05849766 | PHASE3 | COMPLETED | Effect of Dapagliflozin on Cardiac Structure, Function and Secondary Mitral Regurgitation in Patients with Left Ventricle Dysfunction |
| NCT06250257 | PHASE3 | RECRUITING | Bromocriptine in Dilated Cardiomyopathy Among Women of Reproductive Age |
| NCT00170183 | PHASE3 | COMPLETED | Brain Natriuretic Peptide (BNP) to Preserve Renal Function in Hospitalized Patients With Heart Failure |
| NCT00270387 | PHASE3 | COMPLETED | A Study of Short-Term Outcomes and Economic Impact For Patients With Worsening Congestive Heart Failure When Natrecor (Nesiritide) is Added to Standard-Care Therapy, Compared to Administration of Placebo With Standard-Care Therapy |
| NCT00321295 | PHASE3 | COMPLETED | Biventricular Pacing In Patients With Left Ventricular Dysfunction After Cardiovascular Surgery |
| NCT00483197 | PHASE3 | UNKNOWN | VentrAssistTM LVAD as a Bridge to Cardiac Transplantation - Pivotal Trial |
| NCT00490321 | PHASE3 | UNKNOWN | VentrAssistTM LVAD for the Treatment of Advanced Heart Failure - Destination Therapy |
Related Atlas pages
- Associated diseases: dilated cardiomyopathy
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): dilated cardiomyopathy, familial hypertrophic cardiomyopathy, neuronal ceroid lipofuscinosis