ILRUN-AS1

Summary

ILRUN-AS1 (ILRUN antisense RNA 1, HGNC:55216) is a long non-coding RNA gene on chromosome 6p21.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55216
Approved symbol	ILRUN-AS1
Name	ILRUN antisense RNA 1
Location	6p21.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000272288
Ensembl biotype	lncRNA
Entrez	101929243
RNAcentral	URS0000A777D1 — lncRNA, 882 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000606496, ENST00000606971, ENST00000667026, ENST00000689838, ENST00000765803

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000606496 — 2 exons

Exon	Start	End
ENSE00003699093	34696940	34696997
ENSE00003883521	34697159	34697471

Expression profiles

Bgee: expression breadth ubiquitous, 247 present calls, max score 99.53.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 6.5237 / max 88.0861, expressed in 1737 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
67370	5.8611	1703
67369	0.4114	188
67371	0.2513	77

Top tissues by expression

252 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	99.53	gold quality
pancreatic ductal cell	CL:0002079	97.41	gold quality
left testis	UBERON:0004533	96.18	gold quality
right testis	UBERON:0004534	96.10	gold quality
testis	UBERON:0000473	94.17	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.73	gold quality
left ventricle myocardium	UBERON:0006566	92.48	gold quality
apex of heart	UBERON:0002098	91.60	gold quality
heart left ventricle	UBERON:0002084	89.57	gold quality
cardiac ventricle	UBERON:0002082	89.40	gold quality
right atrium auricular region	UBERON:0006631	89.15	gold quality
cardiac atrium	UBERON:0002081	88.76	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	88.54	gold quality
hindlimb stylopod muscle	UBERON:0004252	88.01	gold quality
epithelial cell of pancreas	CL:0000083	87.87	silver quality
mucosa of transverse colon	UBERON:0004991	87.77	gold quality
heart	UBERON:0000948	87.71	gold quality
myocardium	UBERON:0002349	87.38	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	87.29	gold quality
spinal cord	UBERON:0002240	87.02	gold quality
right adrenal gland cortex	UBERON:0035827	86.74	gold quality
right adrenal gland	UBERON:0001233	86.69	gold quality
left adrenal gland cortex	UBERON:0035825	86.68	gold quality
ileal mucosa	UBERON:0000331	86.64	gold quality
left adrenal gland	UBERON:0001234	86.14	gold quality
pigmented layer of retina	UBERON:0001782	85.99	gold quality
heart right ventricle	UBERON:0002080	85.98	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	85.83	gold quality
adrenal cortex	UBERON:0001235	85.68	gold quality
leukocyte	CL:0000738	85.60	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	6.85

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.